Miyakogusa Predicted Gene

Lj6g3v0027680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0027680.1 tr|G7I3R9|G7I3R9_MEDTR NADH-quinone
oxidoreductase subunit F OS=Medicago truncatula GN=MTR_1g042300
,94.62,0,Nqo1 FMN-binding domain-like,NULL; Nqo1C-terminal
domain-like,NULL; Nqo1 middle domain-like,NULL; se,CUFF.57401.1
         (483 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g042300.2 | NADH-ubiquinone oxidoreductase 51 kDa subunit ...   934   0.0  
Medtr1g042300.1 | NADH-ubiquinone oxidoreductase 51 kDa subunit ...   934   0.0  

>Medtr1g042300.2 | NADH-ubiquinone oxidoreductase 51 kDa subunit |
           HC | chr1:15784412-15780393 | 20130731
          Length = 483

 Score =  934 bits (2414), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/483 (92%), Positives = 463/483 (95%)

Query: 1   MRGILSVTKATLARHQGEKLGLGLRLFSTQGASTATTXXXXXXXXXXEKTHFGGLKDEDR 60
           MRGILS+ +A L R   EKLGLG+RLFSTQGASTA+T          EKTHFGGLKDEDR
Sbjct: 1   MRGILSLKRAVLVRQHSEKLGLGVRLFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 60

Query: 61  IFTNLYGIHDPFLKGAMKRGDWYRTKDLVTKGTDWIVNEMKKSGLRGRGGAGFPSGLKWS 120
           IFTNLYG+HDPFLKGAMKRGDW+RTKDLV KGTDWIVNEMKKSGLRGRGGAGFPSGLKWS
Sbjct: 61  IFTNLYGLHDPFLKGAMKRGDWHRTKDLVIKGTDWIVNEMKKSGLRGRGGAGFPSGLKWS 120

Query: 121 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYSYIRG 180
           FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAY YIRG
Sbjct: 121 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRG 180

Query: 181 EYVNERINLEKARKEAYAAGLLGKNACGSGYDFDVYIHYGAGAYICGEETALLESLEGKQ 240
           EYVNER+NLEKARKEAYAAGLLGKNACGSGYDFDV+IHYGAGAYICGEETALLESLEGKQ
Sbjct: 181 EYVNERLNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 240

Query: 241 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSG 300
           GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNN+GTKL+CVSG
Sbjct: 241 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLYCVSG 300

Query: 301 HVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 360
           HVNKPCTVEEEMS+PLKELIERHCGGVRGGWDNLLA+IPGGSSVPL+PKH+CDDVLMDYD
Sbjct: 301 HVNKPCTVEEEMSMPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKHVCDDVLMDYD 360

Query: 361 ALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 420
           ALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+K
Sbjct: 361 ALKAVGSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMK 420

Query: 421 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEYAQRELLQ 480
           VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE AQRELLQ
Sbjct: 421 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKENAQRELLQ 480

Query: 481 ATG 483
           ATG
Sbjct: 481 ATG 483


>Medtr1g042300.1 | NADH-ubiquinone oxidoreductase 51 kDa subunit |
           HC | chr1:15785717-15780363 | 20130731
          Length = 483

 Score =  934 bits (2414), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/483 (92%), Positives = 463/483 (95%)

Query: 1   MRGILSVTKATLARHQGEKLGLGLRLFSTQGASTATTXXXXXXXXXXEKTHFGGLKDEDR 60
           MRGILS+ +A L R   EKLGLG+RLFSTQGASTA+T          EKTHFGGLKDEDR
Sbjct: 1   MRGILSLKRAVLVRQHSEKLGLGVRLFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 60

Query: 61  IFTNLYGIHDPFLKGAMKRGDWYRTKDLVTKGTDWIVNEMKKSGLRGRGGAGFPSGLKWS 120
           IFTNLYG+HDPFLKGAMKRGDW+RTKDLV KGTDWIVNEMKKSGLRGRGGAGFPSGLKWS
Sbjct: 61  IFTNLYGLHDPFLKGAMKRGDWHRTKDLVIKGTDWIVNEMKKSGLRGRGGAGFPSGLKWS 120

Query: 121 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYSYIRG 180
           FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAY YIRG
Sbjct: 121 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRG 180

Query: 181 EYVNERINLEKARKEAYAAGLLGKNACGSGYDFDVYIHYGAGAYICGEETALLESLEGKQ 240
           EYVNER+NLEKARKEAYAAGLLGKNACGSGYDFDV+IHYGAGAYICGEETALLESLEGKQ
Sbjct: 181 EYVNERLNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 240

Query: 241 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSG 300
           GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNN+GTKL+CVSG
Sbjct: 241 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLYCVSG 300

Query: 301 HVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 360
           HVNKPCTVEEEMS+PLKELIERHCGGVRGGWDNLLA+IPGGSSVPL+PKH+CDDVLMDYD
Sbjct: 301 HVNKPCTVEEEMSMPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKHVCDDVLMDYD 360

Query: 361 ALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 420
           ALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+K
Sbjct: 361 ALKAVGSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMK 420

Query: 421 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEYAQRELLQ 480
           VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE AQRELLQ
Sbjct: 421 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKENAQRELLQ 480

Query: 481 ATG 483
           ATG
Sbjct: 481 ATG 483