Miyakogusa Predicted Gene

Lj6g3v0025640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0025640.1 CUFF.57381.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g041795.1 | cyanate hydratase | HC | chr1:15710615-1570638...   259   6e-70

>Medtr1g041795.1 | cyanate hydratase | HC | chr1:15710615-15706380 |
           20130731
          Length = 165

 Score =  259 bits (663), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 124/165 (75%), Positives = 140/165 (84%)

Query: 1   MELNKGSTVARLQSVKRNSGKSYSELAEETGLTNVYVAQLLRRQAQLKPDTAPKLQAALP 60
           M  NK +TV++LQS+K  SGKSY++LAEETGLTNVYVAQLLRRQA LKP+TAPKL+AALP
Sbjct: 1   MAQNKANTVSQLQSLKNKSGKSYNQLAEETGLTNVYVAQLLRRQAHLKPETAPKLKAALP 60

Query: 61  DLTDELVHEMMTPPLRSYDPNLIQDPTVYRLNEAVMHFGESIKEIINEDFGDGIMSAIDF 120
           +L +EL+HEMM PPLRSYDPN+IQDPTVYRLNEAVMHFGESIKEIINE+FGDGIMSAIDF
Sbjct: 61  ELPEELIHEMMKPPLRSYDPNIIQDPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDF 120

Query: 121 FCSXXXXXXXXXXXXXXLTFDGKYLPHTEQITENMVSRTRPQGKQ 165
           +CS              LTFDGKYLPH+EQ TE+MVSRTRP  KQ
Sbjct: 121 YCSVDKVQGVDGKDRVVLTFDGKYLPHSEQKTEHMVSRTRPLEKQ 165