Miyakogusa Predicted Gene

Lj6g3v0003340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0003340.1 Non Characterized Hit- tr|A9NW78|A9NW78_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,36.31,8e-19,seg,NULL,CUFF.57355.1
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g041410.1 | neurogenic locus notch-like protein | HC | chr...   300   7e-82
Medtr1g080990.2 | MtN26 | HC | chr1:36062765-36060795 | 20130731      160   9e-40
Medtr1g080990.3 | MtN26 | HC | chr1:36062765-36060795 | 20130731      137   7e-33
Medtr7g114890.1 | hypothetical protein | HC | chr7:47432969-4743...   112   3e-25
Medtr7g114890.3 | hypothetical protein | HC | chr7:47432969-4743...   111   4e-25
Medtr7g114890.4 | hypothetical protein | HC | chr7:47432969-4743...    96   3e-20
Medtr7g114890.2 | hypothetical protein | HC | chr7:47432969-4743...    96   3e-20
Medtr1g080990.1 | MtN26 | HC | chr1:36062677-36061070 | 20130731       88   6e-18

>Medtr1g041410.1 | neurogenic locus notch-like protein | HC |
           chr1:15490155-15486147 | 20130731
          Length = 214

 Score =  300 bits (768), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 147/199 (73%), Positives = 172/199 (86%), Gaps = 2/199 (1%)

Query: 19  QPLSAKSDFLSPLLAPIFDDVCKKVECGKGSCKASQNSTFFFECECEPGWKQAPSSNDTL 78
           QPLS KSDFLSPLL+PIF+DVCK+VECGKG+CK S+NSTF FECEC+ GWK+A  S D  
Sbjct: 16  QPLSTKSDFLSPLLSPIFEDVCKEVECGKGTCKPSKNSTFPFECECDHGWKKALDSIDDE 75

Query: 79  GLKFLPCIVPNCTLNYSCSKAPAPAQEKARKVDESVFDACHWVDCGGGSCNKTSMLSYSC 138
           GLKFLPCI+PNCTL+YSCSKAPAPA EKA+K +ES+FDACHWVDCGGGSC KTS  +YSC
Sbjct: 76  GLKFLPCIIPNCTLDYSCSKAPAPAPEKAKKSNESIFDACHWVDCGGGSCKKTSTFNYSC 135

Query: 139 ECDAGYYNLLNVTSFPCYRECALGMGCSDLGL--SMSNSSTSEPPALNDNSKNGASSALQ 196
           ECD  YYNLLN+T+FPC+REC++GMGCSDLG+  S S+SS++ PP LN+NSKN A S LQ
Sbjct: 136 ECDTSYYNLLNITTFPCFRECSIGMGCSDLGISMSNSSSSSAPPPVLNENSKNEAISILQ 195

Query: 197 GSSLWLVMLIMFMAKILLQ 215
           G SLWLV++IM MAKI LQ
Sbjct: 196 GRSLWLVLVIMVMAKIQLQ 214


>Medtr1g080990.2 | MtN26 | HC | chr1:36062765-36060795 | 20130731
          Length = 203

 Score =  160 bits (405), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 112/195 (57%), Gaps = 13/195 (6%)

Query: 20  PLSAKSDFLSPLLAPIFDDVCKKVECGKGSCKASQNSTFFFECECEPGWKQAPSSNDTL- 78
           P++AK DF   +L    + VC++VECGKG+C  + +    F CEC+ GWK+    +D + 
Sbjct: 19  PMAAKGDFFDDVL----EKVCEEVECGKGNCVVNSSYPLNFVCECDSGWKRTQDEDDDIY 74

Query: 79  GLKFLPCIVPNCTLNYSCSKAPAPAQEKARKVDESVFDACHWVDCGGGSCNKTSMLSYSC 138
              FLPC++P C+LNY C  AP P  EK    + S FD C+W  CG G C K    ++ C
Sbjct: 75  ATSFLPCVIPQCSLNYGCQPAPPPVPEKTLPRNISAFDPCYWAYCGEGQCTKNKTHTHRC 134

Query: 139 ECDAGYYNLLNVTSFPCYRECALGMGCSDLGLSMSNSSTSEPPALNDNSKNGASSALQGS 198
           EC+  YYNLLN++ FPCY EC LG  CS LG+ +SNS+         +  + ASS   G 
Sbjct: 135 ECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVSNST--------GDVDSHASSIFGGR 186

Query: 199 SLWLVMLIMFMAKIL 213
             W+ +L++    ++
Sbjct: 187 FHWITVLLISTGMVM 201


>Medtr1g080990.3 | MtN26 | HC | chr1:36062765-36060795 | 20130731
          Length = 158

 Score =  137 bits (345), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 86/141 (60%), Gaps = 5/141 (3%)

Query: 20  PLSAKSDFLSPLLAPIFDDVCKKVECGKGSCKASQNSTFFFECECEPGWKQAPSSNDTL- 78
           P++AK DF   +L    + VC++VECGKG+C  + +    F CEC+ GWK+    +D + 
Sbjct: 19  PMAAKGDFFDDVL----EKVCEEVECGKGNCVVNSSYPLNFVCECDSGWKRTQDEDDDIY 74

Query: 79  GLKFLPCIVPNCTLNYSCSKAPAPAQEKARKVDESVFDACHWVDCGGGSCNKTSMLSYSC 138
              FLPC++P C+LNY C  AP P  EK    + S FD C+W  CG G C K    ++ C
Sbjct: 75  ATSFLPCVIPQCSLNYGCQPAPPPVPEKTLPRNISAFDPCYWAYCGEGQCTKNKTHTHRC 134

Query: 139 ECDAGYYNLLNVTSFPCYREC 159
           EC+  YYNLLN++ FPCY EC
Sbjct: 135 ECNPNYYNLLNISVFPCYSEC 155


>Medtr7g114890.1 | hypothetical protein | HC |
           chr7:47432969-47434350 | 20130731
          Length = 204

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 95/177 (53%), Gaps = 19/177 (10%)

Query: 37  DDVCKKVECGKGSCKAS--QNSTFFFECECEPGWKQAPSSNDTLGLKF--LPCIVPNCTL 92
           D +C++VECGKG C A+    + F   CECEPGW+Q     D    KF  LPC++P CT+
Sbjct: 34  DKICREVECGKGKCGATSTHKNPFSVFCECEPGWQQIKVDPDYSN-KFPPLPCVIPECTI 92

Query: 93  NYSCSKAPAPAQEKARKV--DESVFDACHWVDCGGGSCNKTSM-----LSYSCECDAGYY 145
           N  C +A     EK  ++  + S  D C+   CG G+C K S        Y CEC   Y+
Sbjct: 93  NDDCKQALPLVPEKDFQIPHNMSHSDPCYLAFCGEGTCIKNSKKQKHNYKYRCECKPNYF 152

Query: 146 NLLNVTSFPCYRECALGMGCSDLGLSMSNSSTSEPPALNDNSKNGASSALQGSSLWL 202
           NLLN++  PCY +C+LG  CS LG+ + NS       + DNS    +S+ +   + L
Sbjct: 153 NLLNMSGLPCYNKCSLGSDCSKLGIKIVNS-------IADNSVLSIASSTRAKKVPL 202


>Medtr7g114890.3 | hypothetical protein | HC |
           chr7:47432969-47434033 | 20130731
          Length = 199

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 85/150 (56%), Gaps = 12/150 (8%)

Query: 37  DDVCKKVECGKGSCKAS--QNSTFFFECECEPGWKQAPSSNDTLGLKF--LPCIVPNCTL 92
           D +C++VECGKG C A+    + F   CECEPGW+Q     D    KF  LPC++P CT+
Sbjct: 34  DKICREVECGKGKCGATSTHKNPFSVFCECEPGWQQIKVDPDYSN-KFPPLPCVIPECTI 92

Query: 93  NYSCSKAPAPAQEKARKV--DESVFDACHWVDCGGGSCNKTSM-----LSYSCECDAGYY 145
           N  C +A     EK  ++  + S  D C+   CG G+C K S        Y CEC   Y+
Sbjct: 93  NDDCKQALPLVPEKDFQIPHNMSHSDPCYLAFCGEGTCIKNSKKQKHNYKYRCECKPNYF 152

Query: 146 NLLNVTSFPCYRECALGMGCSDLGLSMSNS 175
           NLLN++  PCY +C+LG  CS LG+ + NS
Sbjct: 153 NLLNMSGLPCYNKCSLGSDCSKLGIKIVNS 182


>Medtr7g114890.4 | hypothetical protein | HC |
           chr7:47432969-47433858 | 20130731
          Length = 174

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 12/135 (8%)

Query: 37  DDVCKKVECGKGSCKAS--QNSTFFFECECEPGWKQAPSSNDTLGLKF--LPCIVPNCTL 92
           D +C++VECGKG C A+    + F   CECEPGW+Q     D    KF  LPC++P CT+
Sbjct: 34  DKICREVECGKGKCGATSTHKNPFSVFCECEPGWQQIKVDPDYSN-KFPPLPCVIPECTI 92

Query: 93  NYSCSKAPAPAQEKARKVDESVF--DACHWVDCGGGSCNKTSM-----LSYSCECDAGYY 145
           N  C +A     EK  ++  ++   D C+   CG G+C K S        Y CEC   Y+
Sbjct: 93  NDDCKQALPLVPEKDFQIPHNMSHSDPCYLAFCGEGTCIKNSKKQKHNYKYRCECKPNYF 152

Query: 146 NLLNVTSFPCYRECA 160
           NLLN++  PCY +C 
Sbjct: 153 NLLNMSGLPCYNKCT 167


>Medtr7g114890.2 | hypothetical protein | HC |
           chr7:47432969-47433858 | 20130731
          Length = 174

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 12/135 (8%)

Query: 37  DDVCKKVECGKGSCKAS--QNSTFFFECECEPGWKQAPSSNDTLGLKF--LPCIVPNCTL 92
           D +C++VECGKG C A+    + F   CECEPGW+Q     D    KF  LPC++P CT+
Sbjct: 34  DKICREVECGKGKCGATSTHKNPFSVFCECEPGWQQIKVDPDYSN-KFPPLPCVIPECTI 92

Query: 93  NYSCSKAPAPAQEKARKVDESVF--DACHWVDCGGGSCNKTSM-----LSYSCECDAGYY 145
           N  C +A     EK  ++  ++   D C+   CG G+C K S        Y CEC   Y+
Sbjct: 93  NDDCKQALPLVPEKDFQIPHNMSHSDPCYLAFCGEGTCIKNSKKQKHNYKYRCECKPNYF 152

Query: 146 NLLNVTSFPCYRECA 160
           NLLN++  PCY +C 
Sbjct: 153 NLLNMSGLPCYNKCT 167


>Medtr1g080990.1 | MtN26 | HC | chr1:36062677-36061070 | 20130731
          Length = 161

 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 5/105 (4%)

Query: 20  PLSAKSDFLSPLLAPIFDDVCKKVECGKGSCKASQNSTFFFECECEPGWKQAPSSNDTL- 78
           P++AK DF   +L    + VC++VECGKG+C  + +    F CEC+ GWK+    +D + 
Sbjct: 19  PMAAKGDFFDDVL----EKVCEEVECGKGNCVVNSSYPLNFVCECDSGWKRTQDEDDDIY 74

Query: 79  GLKFLPCIVPNCTLNYSCSKAPAPAQEKARKVDESVFDACHWVDC 123
              FLPC++P C+LNY C  AP P  EK    + S FD     DC
Sbjct: 75  ATSFLPCVIPQCSLNYGCQPAPPPVPEKTLPRNISAFDRTLGSDC 119