Miyakogusa Predicted Gene

Lj6g3v0003330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0003330.1 Non Characterized Hit- tr|C6T8U3|C6T8U3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30803
PE,88.76,0,UNCHARACTERIZED,Protein of unknown function DUF2363;
seg,NULL; DUF2363,Protein of unknown function D,CUFF.57356.1
         (436 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g041405.1 | UPF0760 C2orf29-like protein | HC | chr1:15476...   656   0.0  
Medtr1g041405.2 | UPF0760 C2orf29-like protein | HC | chr1:15476...   444   e-125

>Medtr1g041405.1 | UPF0760 C2orf29-like protein | HC |
           chr1:15476848-15485376 | 20130731
          Length = 455

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/455 (72%), Positives = 363/455 (79%), Gaps = 19/455 (4%)

Query: 1   MSIRRLSGEESMSLFSLLKADQRPIHEILAEFNSTLSRNRHFTLCSYLLMLLQDNKVLTT 60
           MSIR+LS EES SL+SL+K DQRP++EIL+EF ST+  +RH+T CSYLL+LLQDNKVLTT
Sbjct: 1   MSIRKLSFEESRSLYSLIKQDQRPLNEILSEFKSTIPHSRHYTFCSYLLILLQDNKVLTT 60

Query: 61  TERLIAFSLLLEAYSSQKPASNPFITFIINASCDEGSIKVERAFILQLLGVDSSNSGKEF 120
           TERLI F+LL+EAYSSQ PASNPFI+FIINASC EGS K+E+AFILQLLGVD S++GKEF
Sbjct: 61  TERLIVFALLVEAYSSQNPASNPFISFIINASCHEGSTKIEKAFILQLLGVDVSHNGKEF 120

Query: 121 LKQSASDYVQGFDQSLHEFPPLDQLQQQFSDKVHPKPYHCLFKDGXXXXXXXXXXXXXXX 180
           LKQSASDYV  FD SL++FP LDQL+QQFSDKV+ +PYH LFKDG               
Sbjct: 121 LKQSASDYVTRFDPSLNDFPSLDQLKQQFSDKVNQEPYHHLFKDGFVKNVVPDPDVPPNC 180

Query: 181 XXXXXEFDLRPGAKPKLGTGDKDEAVVXXXXXXXXXXXXPHWXXXXXXXXXXXDGELVWL 240
                EFD RPG +PKLGTG+KDEAVV            PHW           DGELVW+
Sbjct: 181 DTDSSEFDQRPGTQPKLGTGNKDEAVVGLLSNISLEGLNPHWIRPLPPRLPILDGELVWV 240

Query: 241 NPD-------------------DNHELMWDYGMCVDTSRGAAVRDLIAKALKGALAPTQQ 281
           NP+                   D  ELMWD GMCVDTSRGAAVRDLIAKA KGALAP QQ
Sbjct: 241 NPNGKPFPSMVNAFQLVGVNPNDYPELMWDNGMCVDTSRGAAVRDLIAKAQKGALAPVQQ 300

Query: 282 EQVLLELGNDPKLVYHCGLTPRKLPELVENNPLIAVDVLTKLINSPEIAEYFTVLVNMDM 341
           EQ LLEL  DPK+VYHCGLTPRKLPELVENNPLIAV++LT LI SP+I+EYFTVLVNMDM
Sbjct: 301 EQFLLELARDPKVVYHCGLTPRKLPELVENNPLIAVEILTNLIKSPDISEYFTVLVNMDM 360

Query: 342 SLHSMEVVNRLTTAVELPSEFIHMYITNCISSCVSIKDKYMQNRLVRLVCVFLQSLIRNN 401
           SLHSMEVVNRLTTAVELPSEFIHMYITNCISSCV+IKDKYMQNRLVRLVCVFLQSLIRNN
Sbjct: 361 SLHSMEVVNRLTTAVELPSEFIHMYITNCISSCVNIKDKYMQNRLVRLVCVFLQSLIRNN 420

Query: 402 IINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 436
           IINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE
Sbjct: 421 IINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 455


>Medtr1g041405.2 | UPF0760 C2orf29-like protein | HC |
           chr1:15476873-15485376 | 20130731
          Length = 371

 Score =  444 bits (1142), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/350 (64%), Positives = 258/350 (73%), Gaps = 19/350 (5%)

Query: 1   MSIRRLSGEESMSLFSLLKADQRPIHEILAEFNSTLSRNRHFTLCSYLLMLLQDNKVLTT 60
           MSIR+LS EES SL+SL+K DQRP++EIL+EF ST+  +RH+T CSYLL+LLQDNKVLTT
Sbjct: 1   MSIRKLSFEESRSLYSLIKQDQRPLNEILSEFKSTIPHSRHYTFCSYLLILLQDNKVLTT 60

Query: 61  TERLIAFSLLLEAYSSQKPASNPFITFIINASCDEGSIKVERAFILQLLGVDSSNSGKEF 120
           TERLI F+LL+EAYSSQ PASNPFI+FIINASC EGS K+E+AFILQLLGVD S++GKEF
Sbjct: 61  TERLIVFALLVEAYSSQNPASNPFISFIINASCHEGSTKIEKAFILQLLGVDVSHNGKEF 120

Query: 121 LKQSASDYVQGFDQSLHEFPPLDQLQQQFSDKVHPKPYHCLFKDGXXXXXXXXXXXXXXX 180
           LKQSASDYV  FD SL++FP LDQL+QQFSDKV+ +PYH LFKDG               
Sbjct: 121 LKQSASDYVTRFDPSLNDFPSLDQLKQQFSDKVNQEPYHHLFKDGFVKNVVPDPDVPPNC 180

Query: 181 XXXXXEFDLRPGAKPKLGTGDKDEAVVXXXXXXXXXXXXPHWXXXXXXXXXXXDGELVW- 239
                EFD RPG +PKLGTG+KDEAVV            PHW           DGELVW 
Sbjct: 181 DTDSSEFDQRPGTQPKLGTGNKDEAVVGLLSNISLEGLNPHWIRPLPPRLPILDGELVWV 240

Query: 240 ------------------LNPDDNHELMWDYGMCVDTSRGAAVRDLIAKALKGALAPTQQ 281
                             +NP+D  ELMWD GMCVDTSRGAAVRDLIAKA KGALAP QQ
Sbjct: 241 NPNGKPFPSMVNAFQLVGVNPNDYPELMWDNGMCVDTSRGAAVRDLIAKAQKGALAPVQQ 300

Query: 282 EQVLLELGNDPKLVYHCGLTPRKLPELVENNPLIAVDVLTKLINSPEIAE 331
           EQ LLEL  DPK+VYHCGLTPRKLPELVENNPLIAV++LT LI SP+I++
Sbjct: 301 EQFLLELARDPKVVYHCGLTPRKLPELVENNPLIAVEILTNLIKSPDISD 350