Miyakogusa Predicted Gene

Lj5g3v2300390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2300390.1 Non Characterized Hit- tr|I1NJC2|I1NJC2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,83.11,0,seg,NULL;
UPF0061,Uncharacterised protein family UPF0061; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,CUFF.57319.1
         (615 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g116875.1 | UPF0061 AZOSEA38000-like protein | HC | chr1:5...  1079   0.0  

>Medtr1g116875.1 | UPF0061 AZOSEA38000-like protein | HC |
           chr1:52793035-52786777 | 20130731
          Length = 619

 Score = 1079 bits (2790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/604 (85%), Positives = 552/604 (91%), Gaps = 15/604 (2%)

Query: 22  SSSLRRAA--TKFHFYPPPPATVACTRRAMEDQD-------LHSVTQDFKNHSLHGGRKL 72
           +S +RR     KFH YP     V C R  M+  +       L SVTQ+FKN SL   +K 
Sbjct: 21  NSLIRRGGGIRKFHLYP-----VRCCRMMMDSTEKGLSAPLLDSVTQEFKNQSLIQKKKR 75

Query: 73  NLEDLNWDNSFVRELPPDPRTDSLPREVLHACYSKVSPSVEVDDPQLVAWSQPVADLLDL 132
            LEDLNWDNSFVR+LP DPRTD  PREVLHACY+KVSPSV VDDPQLV WS+ VA+LLDL
Sbjct: 76  ELEDLNWDNSFVRDLPSDPRTDPFPREVLHACYTKVSPSVSVDDPQLVVWSESVAELLDL 135

Query: 133 DHQEFERPEFPLFFSGATPLVGAFPYAQCYGGHQFGMWAGQLGDGRAITLGEILNAKSER 192
           D+ EF+RP+FPLFFSGA+P VGAFPYAQCYGGHQFGMWAGQLGDGRAITLGEILN+ S+R
Sbjct: 136 DNNEFQRPDFPLFFSGASPFVGAFPYAQCYGGHQFGMWAGQLGDGRAITLGEILNSNSQR 195

Query: 193 WELQLKGSGKTPYSRFADGLAVLRSSVREFLCSEAMHHLGIPTSRALCLVTTGKLVTRDM 252
           WELQLKG+GKTPYSRFADGLAVLRSSVREFLCSEAMHHLGIPT+RAL LVTTGKLVTRDM
Sbjct: 196 WELQLKGAGKTPYSRFADGLAVLRSSVREFLCSEAMHHLGIPTTRALSLVTTGKLVTRDM 255

Query: 253 FYDGNPKEEPGAIVCRVAQSFLRFGSFQIHASRG-NEDIGIVRGLADYAIKHHFPHIENM 311
           FYDGNPKEE GAIVCRVAQSFLRFGS+Q+HASRG NED+ IVR LADYAIKHHFPHIENM
Sbjct: 256 FYDGNPKEEQGAIVCRVAQSFLRFGSYQLHASRGSNEDLEIVRVLADYAIKHHFPHIENM 315

Query: 312 SKSETLSFSTGDEDHSVVDLTSNKYAAWAVEVAERTASLIARWQGVGFTHGVMNTDNMSI 371
           SKSE+LSFSTGDEDHSVVDLTSNKYAAWAVE+AERTAS+IARWQGVGFTHGVMNTDNMSI
Sbjct: 316 SKSESLSFSTGDEDHSVVDLTSNKYAAWAVEIAERTASMIARWQGVGFTHGVMNTDNMSI 375

Query: 372 LGLTIDYGPFGFLDAFDPKFTPNTTDLPGRRYCFANQPDIGLWNLAQFTAALSTAHLIDD 431
           LGLTIDYGPFGFLDAFDPKFTPNTTDLPGRRYCFANQPDIGLWNLAQFT  LS AHLI+D
Sbjct: 376 LGLTIDYGPFGFLDAFDPKFTPNTTDLPGRRYCFANQPDIGLWNLAQFTTTLSAAHLIND 435

Query: 432 KEANYALERYGTRFMDDYQAIMTKKLGLPKYNKQLIGKLLSNMAVDKVDYTNFFRTLSNI 491
           KEANYALERYGT+FMDDYQ IMTKKLGLPKYNKQLIGKLL+NMAVDKVDYTNFFRTLSNI
Sbjct: 436 KEANYALERYGTKFMDDYQDIMTKKLGLPKYNKQLIGKLLTNMAVDKVDYTNFFRTLSNI 495

Query: 492 KADTSIPDDELLVPLKSVLLDMGKERKEAWTSWLKTYIHELYTGGISDEERKTSMDLINP 551
           KADTSIPDDELLVPLKSVLLD+G+ERKEAWTSWLKTYIHEL T GISD++RKTSM+++NP
Sbjct: 496 KADTSIPDDELLVPLKSVLLDIGQERKEAWTSWLKTYIHELSTSGISDDQRKTSMNMVNP 555

Query: 552 KYILRNYLCQTAIDAAEIGDFGEVRRLLKLMEHPFDEQPGMEKYARLPPAWAYRPGVCML 611
           KYILRNYLCQTAIDAAEIGDFGEVRRLLKL+EHPFDEQPGMEKYARLPPAWAYRPGVCML
Sbjct: 556 KYILRNYLCQTAIDAAEIGDFGEVRRLLKLVEHPFDEQPGMEKYARLPPAWAYRPGVCML 615

Query: 612 SCSS 615
           SCSS
Sbjct: 616 SCSS 619