Miyakogusa Predicted Gene

Lj5g3v2297780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2297780.1 tr|A4S2E7|A4S2E7_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_33429,30.3,0.00000000000003,SUBFAMILY NOT NAMED,NULL;
SAP30,Histone deacetylase complex subunit SAP30/SAP30-like;
SAP30_Sin3_bdg,CUFF.57244.1
         (230 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111670.1 | histone deacetylase complex subunit SAP30 Sin3...   399   e-111
Medtr1g021970.1 | histone deacetylase complex subunit SAP30 Sin3...   376   e-105
Medtr1g021970.2 | histone deacetylase complex subunit SAP30 Sin3...   370   e-103

>Medtr3g111670.1 | histone deacetylase complex subunit SAP30
           Sin3-binding protein | HC | chr3:52221434-52217445 |
           20130731
          Length = 231

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/230 (88%), Positives = 210/230 (91%), Gaps = 7/230 (3%)

Query: 6   AMESSVNGGGAFSQLHQSCG----DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 61
           AMESSVNGGG F+   QS G    DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK
Sbjct: 4   AMESSVNGGGGFATHLQSFGGGGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 63

Query: 62  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENVQWNGSDMASDDTQK 121
           KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+NVQWNGSDMASDDT K
Sbjct: 64  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDMASDDTHK 123

Query: 122 THKSRHRMNRSLGSSHKTMSRSFSGDSQSKGSVTMTHGSMKVDLSKLEMAALWRYWRHFN 181
           +HKSRHRM+RSLGS HKTMSRSFSGDSQSKGSVTM HGS KVDLSKLEMAALWRYWRHFN
Sbjct: 124 SHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSTKVDLSKLEMAALWRYWRHFN 183

Query: 182 LVDAIPNPSKEQLVDGVQRHFMSQ-QIDELQVIMGFVQAAKRLKSTTVCK 230
           LVD +PNPSKEQLVD VQRHFMSQ Q+DELQVI GFV AAKR+K  TVCK
Sbjct: 184 LVDVVPNPSKEQLVDVVQRHFMSQLQMDELQVIKGFVNAAKRIK--TVCK 231


>Medtr1g021970.1 | histone deacetylase complex subunit SAP30
           Sin3-binding protein | HC | chr1:6722115-6719261 |
           20130731
          Length = 226

 Score =  376 bits (966), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/226 (84%), Positives = 206/226 (91%), Gaps = 4/226 (1%)

Query: 6   AMESSVNGGGAFSQLHQS-CGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAV 64
           AMESSVNGG  FSQ  QS  GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL+GVVKKAV
Sbjct: 4   AMESSVNGG--FSQHFQSFVGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLRGVVKKAV 61

Query: 65  GLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENVQWNGSDMASDDTQKTHK 124
           GLGGWHWLVLTNGIEVKLQRNALSVIE PTG EEDDDLEFEN  W+GSDMASDDTQK+++
Sbjct: 62  GLGGWHWLVLTNGIEVKLQRNALSVIEPPTGLEEDDDLEFENTIWHGSDMASDDTQKSYR 121

Query: 125 SRHRMNRSLGSSHKTMSRSFSGDSQSKGSVTMTHGSMKVDLSKLEMAALWRYWRHFNLVD 184
           SR RM+RSLGSSH++MSRSFS DSQSKGS++M  G  KVDLSKLEM+ALWRYWRHFNLVD
Sbjct: 122 SRPRMHRSLGSSHRSMSRSFSVDSQSKGSISMPQGWTKVDLSKLEMSALWRYWRHFNLVD 181

Query: 185 AIPNPSKEQLVDGVQRHFMSQQIDELQVIMGFVQAAKRLKSTTVCK 230
           A+PNPSKEQLVD VQRHFMSQQ+DELQVI GFV+AAKRL+  T+CK
Sbjct: 182 AVPNPSKEQLVDVVQRHFMSQQMDELQVIRGFVKAAKRLR-RTMCK 226


>Medtr1g021970.2 | histone deacetylase complex subunit SAP30
           Sin3-binding protein | HC | chr1:6722042-6719290 |
           20130731
          Length = 225

 Score =  370 bits (950), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/226 (83%), Positives = 205/226 (90%), Gaps = 5/226 (2%)

Query: 6   AMESSVNGGGAFSQLHQS-CGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAV 64
           AMESSVNGG  FSQ  QS  GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL+GVVKKAV
Sbjct: 4   AMESSVNGG--FSQHFQSFVGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLRGVVKKAV 61

Query: 65  GLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENVQWNGSDMASDDTQKTHK 124
           GLGGWHWLVLTNGIEVKLQRNALSVIE PTG EEDDDLEFEN  W+GSDMASDDTQK+++
Sbjct: 62  GLGGWHWLVLTNGIEVKLQRNALSVIEPPTGLEEDDDLEFENTIWHGSDMASDDTQKSYR 121

Query: 125 SRHRMNRSLGSSHKTMSRSFSGDSQSKGSVTMTHGSMKVDLSKLEMAALWRYWRHFNLVD 184
           SR RM+RSLGSSH++MSRSFS DSQSKGS++M  G   VDLSKLEM+ALWRYWRHFNLVD
Sbjct: 122 SRPRMHRSLGSSHRSMSRSFSVDSQSKGSISMPQG-WTVDLSKLEMSALWRYWRHFNLVD 180

Query: 185 AIPNPSKEQLVDGVQRHFMSQQIDELQVIMGFVQAAKRLKSTTVCK 230
           A+PNPSKEQLVD VQRHFMSQQ+DELQVI GFV+AAKRL+  T+CK
Sbjct: 181 AVPNPSKEQLVDVVQRHFMSQQMDELQVIRGFVKAAKRLRR-TMCK 225