Miyakogusa Predicted Gene

Lj5g3v2292510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2292510.1 tr|G7IF28|G7IF28_MEDTR Transketolase OS=Medicago
truncatula GN=MTR_1g116120 PE=4 SV=1,93.55,0,Thiamin
diphosphate-binding fold (THDP-binding),NULL; TK C-terminal
domain-like,Transketolase, C-ter,CUFF.60852.1
         (279 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g059410.1 | plastid transketolase | HC | chr5:24645325-246...   542   e-154
Medtr1g116120.1 | plastid transketolase | HC | chr1:52485234-524...   542   e-154
Medtr4g024630.1 | plastid transketolase | HC | chr4:8338986-8333...   515   e-146
Medtr4g024630.2 | plastid transketolase | HC | chr4:8337789-8334...   514   e-146
Medtr0776s0010.1 | transketolase 1, thiamin-binding protein | LC...   242   3e-64

>Medtr5g059410.1 | plastid transketolase | HC |
           chr5:24645325-24641837 | 20130731
          Length = 735

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/279 (93%), Positives = 270/279 (96%)

Query: 1   MTLLKSYGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAA 60
           MTLLKS+GDFQK TPEERNVRFGVREH MGAICNGIALHSPGFIPYCATFFVFTDYMRAA
Sbjct: 457 MTLLKSFGDFQKATPEERNVRFGVREHAMGAICNGIALHSPGFIPYCATFFVFTDYMRAA 516

Query: 61  IRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYK 120
           IRISAL EAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSY+
Sbjct: 517 IRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYR 576

Query: 121 VAVLNKKRPSILALSRQKLPQLPGTSIEGVEKGGYIISDNSSGNKPDVILLSTGSELEIA 180
           VAVLN+KRPSILALSRQKLP LPGTSIEGVEKGGY ISDNSSGNKPDVIL+ TGSELEIA
Sbjct: 577 VAVLNQKRPSILALSRQKLPNLPGTSIEGVEKGGYTISDNSSGNKPDVILIGTGSELEIA 636

Query: 181 AAAGEDLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPAAVTARVSIEAASTFGWHKLVG 240
           AAA +DLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPA+VTARVSIEA STFGWHK+VG
Sbjct: 637 AAAADDLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPASVTARVSIEAGSTFGWHKIVG 696

Query: 241 SKGKAIGIDRFGASAPAGKIYKEFGITKEAVIAAAKEVS 279
           SKGK IGIDRFGASAPAGKIYKE+GITKEAVI+AAKEVS
Sbjct: 697 SKGKTIGIDRFGASAPAGKIYKEYGITKEAVISAAKEVS 735


>Medtr1g116120.1 | plastid transketolase | HC |
           chr1:52485234-52489276 | 20130731
          Length = 735

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/279 (93%), Positives = 270/279 (96%)

Query: 1   MTLLKSYGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAA 60
           MTLLKS+GDFQK TPEERNVRFGVREH MGAICNGIALHSPGFIPYCATFFVFTDYMRAA
Sbjct: 457 MTLLKSFGDFQKATPEERNVRFGVREHAMGAICNGIALHSPGFIPYCATFFVFTDYMRAA 516

Query: 61  IRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYK 120
           IRISAL EAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSY+
Sbjct: 517 IRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYR 576

Query: 121 VAVLNKKRPSILALSRQKLPQLPGTSIEGVEKGGYIISDNSSGNKPDVILLSTGSELEIA 180
           VAVLN+KRPSILALSRQKLP LPGTSIEGVEKGGY ISDNSSGNKPDVIL+ TGSELEIA
Sbjct: 577 VAVLNQKRPSILALSRQKLPNLPGTSIEGVEKGGYTISDNSSGNKPDVILIGTGSELEIA 636

Query: 181 AAAGEDLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPAAVTARVSIEAASTFGWHKLVG 240
           AAA +DLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPA+VTARVSIEA STFGWHK+VG
Sbjct: 637 AAAADDLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPASVTARVSIEAGSTFGWHKIVG 696

Query: 241 SKGKAIGIDRFGASAPAGKIYKEFGITKEAVIAAAKEVS 279
           SKGK IGIDRFGASAPAGKIYKE+GITKEAVI+AAKEVS
Sbjct: 697 SKGKTIGIDRFGASAPAGKIYKEYGITKEAVISAAKEVS 735


>Medtr4g024630.1 | plastid transketolase | HC | chr4:8338986-8333916
           | 20130731
          Length = 735

 Score =  515 bits (1326), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/278 (89%), Positives = 260/278 (93%)

Query: 1   MTLLKSYGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAA 60
           MTLLK +GDFQ D+P ERNVRFGVREHGMGAICNGIALHS G IPYCATFFVFTDYMR A
Sbjct: 457 MTLLKKFGDFQSDSPAERNVRFGVREHGMGAICNGIALHSRGLIPYCATFFVFTDYMRGA 516

Query: 61  IRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYK 120
           IR+SALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPN+LMLRPADGNETAG+YK
Sbjct: 517 IRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYK 576

Query: 121 VAVLNKKRPSILALSRQKLPQLPGTSIEGVEKGGYIISDNSSGNKPDVILLSTGSELEIA 180
           VAVLN+KRPSILALSRQKLP L GTSIEGVEKGGYI+SDNS+GNKPDVIL+ TGSELEIA
Sbjct: 577 VAVLNRKRPSILALSRQKLPNLAGTSIEGVEKGGYIVSDNSTGNKPDVILIGTGSELEIA 636

Query: 181 AAAGEDLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPAAVTARVSIEAASTFGWHKLVG 240
             AGEDLRKEGK VRVVSFVSWELFD+QS  YKESVLP AVTARVSIEA STFGW K+VG
Sbjct: 637 YKAGEDLRKEGKAVRVVSFVSWELFDEQSQAYKESVLPTAVTARVSIEAGSTFGWEKIVG 696

Query: 241 SKGKAIGIDRFGASAPAGKIYKEFGITKEAVIAAAKEV 278
           SKGKAIGIDRFGASAPAG IYKEFGITKEAVIAAAKE+
Sbjct: 697 SKGKAIGIDRFGASAPAGTIYKEFGITKEAVIAAAKEL 734


>Medtr4g024630.2 | plastid transketolase | HC | chr4:8337789-8334009
           | 20130731
          Length = 581

 Score =  514 bits (1325), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/278 (89%), Positives = 260/278 (93%)

Query: 1   MTLLKSYGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAA 60
           MTLLK +GDFQ D+P ERNVRFGVREHGMGAICNGIALHS G IPYCATFFVFTDYMR A
Sbjct: 303 MTLLKKFGDFQSDSPAERNVRFGVREHGMGAICNGIALHSRGLIPYCATFFVFTDYMRGA 362

Query: 61  IRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYK 120
           IR+SALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPN+LMLRPADGNETAG+YK
Sbjct: 363 IRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYK 422

Query: 121 VAVLNKKRPSILALSRQKLPQLPGTSIEGVEKGGYIISDNSSGNKPDVILLSTGSELEIA 180
           VAVLN+KRPSILALSRQKLP L GTSIEGVEKGGYI+SDNS+GNKPDVIL+ TGSELEIA
Sbjct: 423 VAVLNRKRPSILALSRQKLPNLAGTSIEGVEKGGYIVSDNSTGNKPDVILIGTGSELEIA 482

Query: 181 AAAGEDLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPAAVTARVSIEAASTFGWHKLVG 240
             AGEDLRKEGK VRVVSFVSWELFD+QS  YKESVLP AVTARVSIEA STFGW K+VG
Sbjct: 483 YKAGEDLRKEGKAVRVVSFVSWELFDEQSQAYKESVLPTAVTARVSIEAGSTFGWEKIVG 542

Query: 241 SKGKAIGIDRFGASAPAGKIYKEFGITKEAVIAAAKEV 278
           SKGKAIGIDRFGASAPAG IYKEFGITKEAVIAAAKE+
Sbjct: 543 SKGKAIGIDRFGASAPAGTIYKEFGITKEAVIAAAKEL 580


>Medtr0776s0010.1 | transketolase 1, thiamin-binding protein | LC |
            scaffold0776:6267-63 | 20130731
          Length = 1918

 Score =  242 bits (618), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 132/250 (52%), Positives = 169/250 (67%), Gaps = 5/250 (2%)

Query: 22   FGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAAIRISALSEAGVIYVMTHDSIG 81
            +GVRE GM A+ NG+ALH  GFIPY  TF VF+DY R AIR+SAL    VI+V+THDSIG
Sbjct: 1335 YGVREFGMIAMMNGLALHG-GFIPYGGTFLVFSDYARNAIRMSALMNRRVIHVLTHDSIG 1393

Query: 82   LGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYKVAVLNKKRPSILALSRQKLPQ 141
            LGEDGPTHQPIEH+AS R +PN+ + RP D  ETA +++VA+     PS L LSRQ LPQ
Sbjct: 1394 LGEDGPTHQPIEHVASLRLIPNLDVWRPCDTIETAIAWQVAIERVDGPSALVLSRQNLPQ 1453

Query: 142  LPGTSI--EGVEKGGYIISDNSSGNKPDVILLSTGSELEIAAAAGEDLRKEGKTVRVVSF 199
                 I  E + +GGY++S+ ++G  PDV+L++TGSE+ +A  A   L  +G    VVS 
Sbjct: 1454 SAQDDIQVERIRRGGYVLSE-AAGGSPDVVLIATGSEVALALDAQLALADKGVRASVVSM 1512

Query: 200  VSWELFDDQSDEYKESVLPAAVTARVSIEAASTFGWHKLVGSKGKAIGIDRFGASAPAGK 259
             S  +FD Q   Y+  VLPA V  RV++EA  +  WHK VG  G+ IG+  FG SAPAGK
Sbjct: 1513 PSTTVFDRQDAAYRADVLPAGVR-RVAVEAGHSDFWHKYVGPDGRVIGLTSFGESAPAGK 1571

Query: 260  IYKEFGITKE 269
            +Y  FG+T E
Sbjct: 1572 LYSHFGLTVE 1581