Miyakogusa Predicted Gene

Lj5g3v2291460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2291460.1 Non Characterized Hit- tr|I1NJ83|I1NJ83_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,79.51,0,UbiA,UbiA prenyltransferase family;
PRENYLTRANSFERASES,NULL; CyoE_CtaB,Protohaem IX
farnesyltransfer,CUFF.60843.1
         (407 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g116110.1 | protoheme IX farnesyltransferase | HC | chr1:5...   606   e-173
Medtr1g116110.2 | protoheme IX farnesyltransferase | HC | chr1:5...   536   e-152
Medtr1g116110.3 | protoheme IX farnesyltransferase | HC | chr1:5...   489   e-138

>Medtr1g116110.1 | protoheme IX farnesyltransferase | HC |
           chr1:52483267-52479241 | 20130731
          Length = 402

 Score =  606 bits (1562), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 291/355 (81%), Positives = 319/355 (89%)

Query: 50  TDLVSLTRHYGTCYWELSKARLSMLVVATSGTGFVLGSTSAVDLSGLSWTCLGTMMVSAS 109
            DL+SL RHYG CY +LSKARLS+LVVATSGTGFVLGS  AVDLS LS+TCLGTMMV+AS
Sbjct: 46  NDLISLARHYGNCYSQLSKARLSLLVVATSGTGFVLGSGGAVDLSMLSYTCLGTMMVAAS 105

Query: 110 ASSLNQVFETNNDAKMKRTCQRPLPSGRISIPHAVAWASSVGLGGTALLATQTNMLAAGL 169
           AS+LNQVFE  NDA M+RT QRPLPSGRI++PHAV WASSVGL GTALLATQTNMLAAGL
Sbjct: 106 ASTLNQVFEIKNDAIMRRTSQRPLPSGRITVPHAVGWASSVGLAGTALLATQTNMLAAGL 165

Query: 170 AASNLVLYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWAAASGDISLNGWILPAALYFWQ 229
           AASNLVLY+FVYTPLKQIHPVNTWVGA+VGAIPPLLGWAAASGDISLN  ILPAALYFWQ
Sbjct: 166 AASNLVLYSFVYTPLKQIHPVNTWVGAVVGAIPPLLGWAAASGDISLNSLILPAALYFWQ 225

Query: 230 LPHFMALAYMCRDDYAAGGFKMYSLADASGRRTALVALRNSIYLIPLGFLAYDWGMTTGW 289
           +PHFMALAYMCR+DYAAGGFKMYSLAD SGR+TA+VA+RNSIYLIPLGFLAYDWG+T+GW
Sbjct: 226 IPHFMALAYMCREDYAAGGFKMYSLADPSGRKTAMVAMRNSIYLIPLGFLAYDWGVTSGW 285

Query: 290 FCLESTVLTLAISAAAFSFYRDRTKEKARRMFHASLLYLPVFMSGLLVHRRSDNQQFLEE 349
           FCLEST LTLAISAAAFSFYRDRTKE+ARRMFHASLLYLPVFM+GLL+HRR+DNQ FLE 
Sbjct: 286 FCLESTALTLAISAAAFSFYRDRTKERARRMFHASLLYLPVFMAGLLIHRRTDNQHFLEV 345

Query: 350 NAKGFVKFXXXXXXXXXXXXNGDKKIKSRRPFQARSPVAYASIAPFPFLPAPSYD 404
           NA+GF+K             NG++KIK R+  +AR PVAYASIAPFPFLPAPSYD
Sbjct: 346 NAEGFMKSPSSVETSEMDDKNGNQKIKGRQGTRARPPVAYASIAPFPFLPAPSYD 400


>Medtr1g116110.2 | protoheme IX farnesyltransferase | HC |
           chr1:52483351-52479031 | 20130731
          Length = 312

 Score =  536 bits (1381), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 255/309 (82%), Positives = 280/309 (90%)

Query: 96  LSWTCLGTMMVSASASSLNQVFETNNDAKMKRTCQRPLPSGRISIPHAVAWASSVGLGGT 155
           LS+TCLGTMMV+ASAS+LNQVFE  NDA M+RT QRPLPSGRI++PHAV WASSVGL GT
Sbjct: 2   LSYTCLGTMMVAASASTLNQVFEIKNDAIMRRTSQRPLPSGRITVPHAVGWASSVGLAGT 61

Query: 156 ALLATQTNMLAAGLAASNLVLYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWAAASGDIS 215
           ALLATQTNMLAAGLAASNLVLY+FVYTPLKQIHPVNTWVGA+VGAIPPLLGWAAASGDIS
Sbjct: 62  ALLATQTNMLAAGLAASNLVLYSFVYTPLKQIHPVNTWVGAVVGAIPPLLGWAAASGDIS 121

Query: 216 LNGWILPAALYFWQLPHFMALAYMCRDDYAAGGFKMYSLADASGRRTALVALRNSIYLIP 275
           LN  ILPAALYFWQ+PHFMALAYMCR+DYAAGGFKMYSLAD SGR+TA+VA+RNSIYLIP
Sbjct: 122 LNSLILPAALYFWQIPHFMALAYMCREDYAAGGFKMYSLADPSGRKTAMVAMRNSIYLIP 181

Query: 276 LGFLAYDWGMTTGWFCLESTVLTLAISAAAFSFYRDRTKEKARRMFHASLLYLPVFMSGL 335
           LGFLAYDWG+T+GWFCLEST LTLAISAAAFSFYRDRTKE+ARRMFHASLLYLPVFM+GL
Sbjct: 182 LGFLAYDWGVTSGWFCLESTALTLAISAAAFSFYRDRTKERARRMFHASLLYLPVFMAGL 241

Query: 336 LVHRRSDNQQFLEENAKGFVKFXXXXXXXXXXXXNGDKKIKSRRPFQARSPVAYASIAPF 395
           L+HRR+DNQ FLE NA+GF+K             NG++KIK R+  +AR PVAYASIAPF
Sbjct: 242 LIHRRTDNQHFLEVNAEGFMKSPSSVETSEMDDKNGNQKIKGRQGTRARPPVAYASIAPF 301

Query: 396 PFLPAPSYD 404
           PFLPAPSYD
Sbjct: 302 PFLPAPSYD 310


>Medtr1g116110.3 | protoheme IX farnesyltransferase | HC |
           chr1:52483351-52479031 | 20130731
          Length = 282

 Score =  489 bits (1259), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 232/280 (82%), Positives = 254/280 (90%)

Query: 125 MKRTCQRPLPSGRISIPHAVAWASSVGLGGTALLATQTNMLAAGLAASNLVLYAFVYTPL 184
           M+RT QRPLPSGRI++PHAV WASSVGL GTALLATQTNMLAAGLAASNLVLY+FVYTPL
Sbjct: 1   MRRTSQRPLPSGRITVPHAVGWASSVGLAGTALLATQTNMLAAGLAASNLVLYSFVYTPL 60

Query: 185 KQIHPVNTWVGAIVGAIPPLLGWAAASGDISLNGWILPAALYFWQLPHFMALAYMCRDDY 244
           KQIHPVNTWVGA+VGAIPPLLGWAAASGDISLN  ILPAALYFWQ+PHFMALAYMCR+DY
Sbjct: 61  KQIHPVNTWVGAVVGAIPPLLGWAAASGDISLNSLILPAALYFWQIPHFMALAYMCREDY 120

Query: 245 AAGGFKMYSLADASGRRTALVALRNSIYLIPLGFLAYDWGMTTGWFCLESTVLTLAISAA 304
           AAGGFKMYSLAD SGR+TA+VA+RNSIYLIPLGFLAYDWG+T+GWFCLEST LTLAISAA
Sbjct: 121 AAGGFKMYSLADPSGRKTAMVAMRNSIYLIPLGFLAYDWGVTSGWFCLESTALTLAISAA 180

Query: 305 AFSFYRDRTKEKARRMFHASLLYLPVFMSGLLVHRRSDNQQFLEENAKGFVKFXXXXXXX 364
           AFSFYRDRTKE+ARRMFHASLLYLPVFM+GLL+HRR+DNQ FLE NA+GF+K        
Sbjct: 181 AFSFYRDRTKERARRMFHASLLYLPVFMAGLLIHRRTDNQHFLEVNAEGFMKSPSSVETS 240

Query: 365 XXXXXNGDKKIKSRRPFQARSPVAYASIAPFPFLPAPSYD 404
                NG++KIK R+  +AR PVAYASIAPFPFLPAPSYD
Sbjct: 241 EMDDKNGNQKIKGRQGTRARPPVAYASIAPFPFLPAPSYD 280