Miyakogusa Predicted Gene

Lj5g3v2291280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2291280.1 tr|G7IF28|G7IF28_MEDTR Transketolase OS=Medicago
truncatula GN=MTR_1g116120 PE=4 SV=1,95.92,0,no description,NULL;
TRANSKETOLASE,NULL; DEHYDROGENASE RELATED,NULL; Thiamin
diphosphate-binding fol,NODE_7223_length_329_cov_2982.668701.path1.1
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g059410.1 | plastid transketolase | HC | chr5:24645325-246...   211   2e-55
Medtr1g116120.1 | plastid transketolase | HC | chr1:52485234-524...   211   2e-55
Medtr4g024630.1 | plastid transketolase | HC | chr4:8338986-8333...   197   1e-51
Medtr0776s0010.1 | transketolase 1, thiamin-binding protein | LC...   124   2e-29
Medtr4g024630.2 | plastid transketolase | HC | chr4:8337789-8334...    83   5e-17

>Medtr5g059410.1 | plastid transketolase | HC |
           chr5:24645325-24641837 | 20130731
          Length = 735

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 94/98 (95%), Positives = 98/98 (100%)

Query: 1   MGCAPMGHILYDEIMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKE 60
           MGCAPMGHILYDE+MRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSV+E+DLK+
Sbjct: 102 MGCAPMGHILYDEVMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKQ 161

Query: 61  FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 98
           FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA
Sbjct: 162 FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 199


>Medtr1g116120.1 | plastid transketolase | HC |
           chr1:52485234-52489276 | 20130731
          Length = 735

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 94/98 (95%), Positives = 98/98 (100%)

Query: 1   MGCAPMGHILYDEIMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKE 60
           MGCAPMGHILYDE+MRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSV+E+DLK+
Sbjct: 102 MGCAPMGHILYDEVMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKQ 161

Query: 61  FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 98
           FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA
Sbjct: 162 FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 199


>Medtr4g024630.1 | plastid transketolase | HC | chr4:8338986-8333916
           | 20130731
          Length = 735

 Score =  197 bits (502), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 89/98 (90%), Positives = 93/98 (94%)

Query: 1   MGCAPMGHILYDEIMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKE 60
           MGCAPMGH+LYDE+MRYNPKNP WFNRDRFVLSAGHGCMLQYALLHLAGYDSVK EDLK+
Sbjct: 102 MGCAPMGHVLYDEVMRYNPKNPFWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKVEDLKQ 161

Query: 61  FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 98
           FRQW S+TPGHPENFET GIEVTTGPLGQGIAN VGLA
Sbjct: 162 FRQWESRTPGHPENFETPGIEVTTGPLGQGIANAVGLA 199


>Medtr0776s0010.1 | transketolase 1, thiamin-binding protein | LC |
            scaffold0776:6267-63 | 20130731
          Length = 1918

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 1    MGCAPMGHILYDEIMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKE 60
            MG A +  +L+ + +R+NP +PSW NRDRF+LS GHG ML YA LHL+GYD +  ++LK 
Sbjct: 955  MGMADIAEVLWRDHLRHNPADPSWSNRDRFILSNGHGSMLLYAALHLSGYD-LPLDELKH 1013

Query: 61   FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 98
            FRQ  +KTPGHPE   T G+E TTGPLGQG+ANGVG+A
Sbjct: 1014 FRQLHAKTPGHPEVDVTPGVETTTGPLGQGLANGVGMA 1051


>Medtr4g024630.2 | plastid transketolase | HC |
          chr4:8337789-8334009 | 20130731
          Length = 581

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/43 (88%), Positives = 40/43 (93%)

Query: 56 EDLKEFRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 98
          EDLK+FRQW S+TPGHPENFET GIEVTTGPLGQGIAN VGLA
Sbjct: 3  EDLKQFRQWESRTPGHPENFETPGIEVTTGPLGQGIANAVGLA 45