Miyakogusa Predicted Gene

Lj5g3v2267380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2267380.1 Non Characterized Hit- tr|I1FEF1|I1FEF1_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica GN,31.56,7e-18,no
description,Zinc finger, RING/FYVE/PHD-type; RING/U-box,NULL;
ZF_RING_2,Zinc finger, RING-type; Z,CUFF.57182.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c...   416   e-116
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c...   369   e-102
Medtr1g037750.1 | helicase, IBR and zinc finger protein | HC | c...   366   e-102

>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
            chr3:39323283-39316838 | 20130731
          Length = 1718

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/240 (82%), Positives = 216/240 (90%)

Query: 1    MCSRDGCSIRSSIQQETGTYILFDRHNQNLRIFGSPDKIDLAQQKLIQSLLSLHEGRQLV 60
            M SRDG +++SSIQQET TYI+FDR N NLRIFGSP++I LAQQKLIQSLLSLHE +QLV
Sbjct: 1370 MLSRDGFNLKSSIQQETRTYIIFDRQNLNLRIFGSPNRIALAQQKLIQSLLSLHEKKQLV 1429

Query: 61   IHLRGKDLPPDLMKQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQIFLHGNKELKPRVEET 120
            I LRGKDLP DLMKQVVKNFGPDLHGLK+KVPG DL LNTR Q IFLHGNKELKPRVEE 
Sbjct: 1430 ISLRGKDLPSDLMKQVVKNFGPDLHGLKEKVPGADLELNTRQQIIFLHGNKELKPRVEEI 1489

Query: 121  ILEIARSSNDLVKRHDTGPSCPICLCEVEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIF 180
             LEIARSS+ LV+R DTGPSCPICLCEVEDGY+LEGCGHLFCRLCLVEQCESAIKNQG F
Sbjct: 1490 TLEIARSSHHLVERLDTGPSCPICLCEVEDGYKLEGCGHLFCRLCLVEQCESAIKNQGSF 1549

Query: 181  PICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRV 240
            PICC+ +GCGDPILLTD R+ L NDKL+ELFRASLGAFV +S GTYRFCPSPDCPS+YRV
Sbjct: 1550 PICCAHQGCGDPILLTDFRTLLSNDKLDELFRASLGAFVASSSGTYRFCPSPDCPSVYRV 1609


>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
            chr3:3875260-3882505 | 20130731
          Length = 1731

 Score =  369 bits (948), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/240 (74%), Positives = 198/240 (82%)

Query: 1    MCSRDGCSIRSSIQQETGTYILFDRHNQNLRIFGSPDKIDLAQQKLIQSLLSLHEGRQLV 60
            + S+DG S+ SSIQ+ T TYI FDR N  LRIFGSPDKI LA++KLIQSLLSLH+ +Q V
Sbjct: 1382 ILSKDGSSLTSSIQKATSTYIQFDRRNMKLRIFGSPDKIALAEKKLIQSLLSLHDEKQSV 1441

Query: 61   IHLRGKDLPPDLMKQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQIFLHGNKELKPRVEET 120
            I L G+DLP D MKQVVKNFGPDLHGLK+KVPG DL LNTR++ I  HGN ELK RVEE 
Sbjct: 1442 ICLSGRDLPSDFMKQVVKNFGPDLHGLKEKVPGADLRLNTRNRTILCHGNSELKSRVEEI 1501

Query: 121  ILEIARSSNDLVKRHDTGPSCPICLCEVEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIF 180
              EIAR SN   +R DTGPSCPICLCEVEDGYQLEGCGHLFC+ C+VEQCESAIKNQG F
Sbjct: 1502 TFEIARLSNPSSERFDTGPSCPICLCEVEDGYQLEGCGHLFCQSCMVEQCESAIKNQGSF 1561

Query: 181  PICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRV 240
            PI C+ +GCG+ ILL D R+ L NDKLEELFRASLGAFV +S GTYRFCPSPDCPSIYRV
Sbjct: 1562 PIRCAHQGCGNHILLVDFRTLLSNDKLEELFRASLGAFVASSSGTYRFCPSPDCPSIYRV 1621


>Medtr1g037750.1 | helicase, IBR and zinc finger protein | HC |
           chr1:14013123-14010559 | 20130731
          Length = 434

 Score =  366 bits (940), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/238 (75%), Positives = 197/238 (82%)

Query: 3   SRDGCSIRSSIQQETGTYILFDRHNQNLRIFGSPDKIDLAQQKLIQSLLSLHEGRQLVIH 62
           S+DG S+ SSIQ+ T TYI FDR N  LRIFGSPDKI LA++KLIQSLLSLH+ +Q VI 
Sbjct: 87  SKDGSSLTSSIQKATSTYIQFDRRNMKLRIFGSPDKIALAEKKLIQSLLSLHDEKQSVIC 146

Query: 63  LRGKDLPPDLMKQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQIFLHGNKELKPRVEETIL 122
           L G+DLP D MKQVVKNFGPDLHGLK+KVPG DL LNTR++ I  HGN ELK RVEE   
Sbjct: 147 LSGRDLPSDFMKQVVKNFGPDLHGLKEKVPGADLRLNTRNRTILCHGNSELKSRVEEITF 206

Query: 123 EIARSSNDLVKRHDTGPSCPICLCEVEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPI 182
           EIAR SN   +R DTGPSCPICLCEVEDGYQLEGCGHLFCR C+VEQCESAIKNQG FPI
Sbjct: 207 EIARLSNPSSERFDTGPSCPICLCEVEDGYQLEGCGHLFCRSCMVEQCESAIKNQGSFPI 266

Query: 183 CCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRV 240
            C+ +GCG+ ILL D R+ L NDKLEELFRASLGAFV +S GTYRFCPSPDCPSIYRV
Sbjct: 267 RCAHQGCGNHILLVDFRTLLSNDKLEELFRASLGAFVASSSGTYRFCPSPDCPSIYRV 324