Miyakogusa Predicted Gene
- Lj5g3v2266340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2266340.1 Non Characterized Hit- tr|D8Q242|D8Q242_SCHCM
Putative uncharacterized protein OS=Schizophyllum
comm,31.33,2e-18,ATP-DEPENDENT RNA HELICASE,NULL;
HA2,Helicase-associated domain; OB_NTP_bind,Domain of unknown
funct,CUFF.57148.1
(552 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c... 810 0.0
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c... 774 0.0
Medtr0267s0070.1 | NB-ARC domain disease resistance protein, put... 772 0.0
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 92 2e-18
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 91 3e-18
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 91 3e-18
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 87 3e-17
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 87 3e-17
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 87 3e-17
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 83 6e-16
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 80 6e-15
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 78 2e-14
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 75 2e-13
Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC | chr7:3... 74 5e-13
Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein |... 70 7e-12
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 69 1e-11
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 67 4e-11
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 67 5e-11
Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA hel... 63 8e-10
Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 63 9e-10
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 63 9e-10
Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC | chr2:4... 61 4e-09
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 54 4e-07
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 50 4e-06
>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
chr3:39323283-39316838 | 20130731
Length = 1718
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/533 (76%), Positives = 435/533 (81%), Gaps = 14/533 (2%)
Query: 20 SSIEMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIAL 79
SSIEMAIRNLIQLG IKLNNN HELT EGR L +MGIEPR GKLILGC L REGI L
Sbjct: 653 SSIEMAIRNLIQLGFIKLNNNVHELTYEGRYLARMGIEPRHGKLILGCFRLGLGREGIVL 712
Query: 80 AAMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCW 139
AA M NAS+IFCR GNEGDKQRSDC KVQFCH DGDLFTLLSVY EWEA P +R+NKWCW
Sbjct: 713 AATMPNASNIFCRFGNEGDKQRSDCLKVQFCHPDGDLFTLLSVYKEWEAQPRDRRNKWCW 772
Query: 140 ENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAEN 199
ENSINAK MRRC DT LEL S LERE F PSYWRW+P+ PS HD N+KKVILSSLAEN
Sbjct: 773 ENSINAKCMRRCQDTVLELESFLEREHGFVVPSYWRWNPHTPSVHDKNLKKVILSSLAEN 832
Query: 200 VATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDF 259
VA +SG NQL YEVAQTG+ VQLHPS SLLVFA+RP WVVFGELLSVSNEYLVCVSA DF
Sbjct: 833 VAMFSGRNQL-YEVAQTGQHVQLHPSSSLLVFAQRPSWVVFGELLSVSNEYLVCVSAVDF 891
Query: 260 QSLHGLHPPPLFDVSKMEERKLQMKTLTGFGTILLRRFCGKANSNLLGLVSRIRKACMDE 319
Q L+ L PPPLFDVSKMEERKLQ KTLTGFGTILL+RFCGK N N+ GL SRIRKACMDE
Sbjct: 892 QLLYSLQPPPLFDVSKMEERKLQTKTLTGFGTILLKRFCGKGNGNMFGLASRIRKACMDE 951
Query: 320 RIFIQVNVDQHDAQLYATSHDMNTALRLVDDVLECEKKWLRAECMEKCLYHGSGFSPPVA 379
RIF++VN+D++ QLYATSHDMNTA +V+DVLE EKK LR ECMEKCLYHGSG S P+A
Sbjct: 952 RIFVEVNIDENLIQLYATSHDMNTASMMVNDVLEYEKKRLRTECMEKCLYHGSGSSSPIA 1011
Query: 380 LFGSGAEIKHLELDKRSLSVDVYHPNVSAIDDKELLMFFEKNTSCCICSVHKFTGMAKDV 439
LFGSGAEIKHLEL+K SLSVD LLMF EKNTS CIC+V+KF GM KDV
Sbjct: 1012 LFGSGAEIKHLELEKHSLSVD-------------LLMFLEKNTSGCICAVYKFPGMVKDV 1058
Query: 440 EDGEKWGRITFLSPDAAKRAAELDGEEFSGSSLKIVTSQSATGGSKPFSFPAVKAKIYWP 499
ED EKWG+ITF SPDAAKRAAELDGEEF GSSLKI+ S S GG K FSFP VKAKIYWP
Sbjct: 1059 EDREKWGKITFSSPDAAKRAAELDGEEFCGSSLKILPSHSVIGGDKTFSFPEVKAKIYWP 1118
Query: 500 RRLSKGVAIVKCDIQDVRFILSEFYNLAIGGRYVRCQISNKCADSVGISGFAK 552
RR SKG IVKCD DV FIL +FYNLAIGGRYVR +SNK DS+ ISG K
Sbjct: 1119 RRFSKGFGIVKCDKNDVDFILRDFYNLAIGGRYVRSALSNKSMDSIVISGLDK 1171
>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
chr3:3875260-3882505 | 20130731
Length = 1731
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/534 (72%), Positives = 430/534 (80%), Gaps = 3/534 (0%)
Query: 20 SSIEMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIAL 79
SSIE AI NLIQLG IKLNN+ +ELT EGR L +M IEPRLGKLILGC + L REGIAL
Sbjct: 652 SSIERAIGNLIQLGAIKLNNDVYELTPEGRRLARMEIEPRLGKLILGCFQYTLGREGIAL 711
Query: 80 AAMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCW 139
AAMM NA S+FCRVGNEGDKQ+SDC KVQFCH +GDLFTLLSVYMEWE P KNKWCW
Sbjct: 712 AAMMANARSVFCRVGNEGDKQKSDCQKVQFCHCEGDLFTLLSVYMEWEVQPQNWKNKWCW 771
Query: 140 ENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAEN 199
ENSINAKSMRRC +T+LEL SCLE EL PSYWRWDP+ PS HD NMKK ILSSL+EN
Sbjct: 772 ENSINAKSMRRCQNTFLELESCLESELGLVVPSYWRWDPHNPSIHDKNMKKAILSSLSEN 831
Query: 200 VATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDF 259
VA YSG NQLGY VAQT + VQLHPSCSLLVF++RP WVVF EL S SNEYL CVSA DF
Sbjct: 832 VAMYSGRNQLGYIVAQTEKHVQLHPSCSLLVFSQRPSWVVFYELRSESNEYLFCVSAVDF 891
Query: 260 QSLHGLHPPPLFDVSKMEERKLQMKTLTGFGTILLRRFCGKANSNLLGLVSRIRKACMDE 319
QSL+ L PPPLFDVSKMEE+KLQ KTL GFG +L+RFCGK NLLG VSRIRKACMDE
Sbjct: 892 QSLYSLKPPPLFDVSKMEEQKLQTKTLVGFGKHVLKRFCGKG--NLLGHVSRIRKACMDE 949
Query: 320 RIFIQVNVDQHDAQLYATSHDMNTALRLVDDVLECEKKWLRAECMEKCLYHGSGFSPPVA 379
RIF+ VN D++ QLYA S+DMNTA +LV+DVL+ EKK L ECMEKCLYHG G S PVA
Sbjct: 950 RIFVDVNFDENHIQLYACSNDMNTASKLVNDVLQYEKKRLHTECMEKCLYHGFGSSSPVA 1009
Query: 380 LFGSGAEIKHLELDKRSLSVDVYHPNVSAIDDKELLMFFEKNTSCCICSVHKFTGMAKDV 439
+FGSGAEIKHLEL+K LSVDV+HPNV+AID+ ELLMFFEKNTS CIC + KFTGM KDV
Sbjct: 1010 MFGSGAEIKHLELEKLPLSVDVFHPNVNAIDEMELLMFFEKNTSGCICDMQKFTGMVKDV 1069
Query: 440 EDGEKWGRITFLSPDAAKRAAELDGEEFSGSSLKIVTSQSATGGSKPFSFPAVKAKIYWP 499
ED KWG+ITF++ +AAKRAAELDGEEF GS LKIV SQSA GG FSFPAV+A+I W
Sbjct: 1070 EDKAKWGKITFMTSNAAKRAAELDGEEFCGSPLKIVHSQSAMGGDTTFSFPAVEARISWL 1129
Query: 500 RRLSKGVAIVKCDIQDVRFILSEFYNLAIGG-RYVRCQISNKCADSVGISGFAK 552
RR K V I+KCD DV FI+ +F NL + G RYVRC S+K D++ I+G K
Sbjct: 1130 RRPIKAVGIIKCDKNDVDFIIRDFENLIVDGRRYVRCAPSDKYLDNILITGLDK 1183
>Medtr0267s0070.1 | NB-ARC domain disease resistance protein, putative
| LC | scaffold0267:17737-24509 | 20130731
Length = 1982
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/534 (71%), Positives = 428/534 (80%), Gaps = 3/534 (0%)
Query: 20 SSIEMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIAL 79
SSIE AI NLIQLG IKLNN+ +ELT EGR L +M IEPRLGKLILGC + L REGIAL
Sbjct: 1307 SSIERAIGNLIQLGAIKLNNDVYELTPEGRRLARMEIEPRLGKLILGCFQYTLGREGIAL 1366
Query: 80 AAMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCW 139
AAMM NA S+FCRVGNE DKQ+SDC KVQFCH +GDLFTLLSVYMEWE P KNKWCW
Sbjct: 1367 AAMMANARSVFCRVGNEDDKQKSDCQKVQFCHCEGDLFTLLSVYMEWEVQPQNWKNKWCW 1426
Query: 140 ENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAEN 199
ENSINAKSMRRC +T+LEL SCLE EL PSYWRWDP+ PS HD NMKK ILSSL+EN
Sbjct: 1427 ENSINAKSMRRCQNTFLELESCLESELGLVVPSYWRWDPHNPSIHDKNMKKAILSSLSEN 1486
Query: 200 VATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDF 259
VA YSG NQLGY VAQT + VQLHPSCSLLVF++RP WVVF EL S SNEYL CVSA DF
Sbjct: 1487 VAMYSGRNQLGYIVAQTEKHVQLHPSCSLLVFSQRPSWVVFYELSSESNEYLFCVSAVDF 1546
Query: 260 QSLHGLHPPPLFDVSKMEERKLQMKTLTGFGTILLRRFCGKANSNLLGLVSRIRKACMDE 319
QSL+ L PPPLFDVSKMEE+KLQ KTL GFG +L+RFCGK NLLG VSRIRKACM+E
Sbjct: 1547 QSLYSLKPPPLFDVSKMEEQKLQTKTLVGFGKHVLKRFCGKG--NLLGHVSRIRKACMEE 1604
Query: 320 RIFIQVNVDQHDAQLYATSHDMNTALRLVDDVLECEKKWLRAECMEKCLYHGSGFSPPVA 379
RIF+ VN D++ Q+YA S+DMNTA +LV+DVL+ EKK L ECMEKCLYHG G S PVA
Sbjct: 1605 RIFVDVNFDENHIQMYACSNDMNTASKLVNDVLQYEKKRLHTECMEKCLYHGFGSSSPVA 1664
Query: 380 LFGSGAEIKHLELDKRSLSVDVYHPNVSAIDDKELLMFFEKNTSCCICSVHKFTGMAKDV 439
+FGSGAEIKHLEL+K LSVDV+HPNV+AID+ ELLMFFEKNTS CIC + KFTGM KDV
Sbjct: 1665 MFGSGAEIKHLELEKLPLSVDVFHPNVNAIDEMELLMFFEKNTSGCICDMQKFTGMVKDV 1724
Query: 440 EDGEKWGRITFLSPDAAKRAAELDGEEFSGSSLKIVTSQSATGGSKPFSFPAVKAKIYWP 499
ED KWG+ITF++ +AAKRAAELDGEEF GS LKIV SQSA GG FSFPAV+A+I W
Sbjct: 1725 EDKAKWGKITFMTSNAAKRAAELDGEEFCGSPLKIVHSQSAMGGDTTFSFPAVEARISWL 1784
Query: 500 RRLSKGVAIVKCDIQDVRFILSEFYNLAIGG-RYVRCQISNKCADSVGISGFAK 552
RR K V I+KCD +V FI+ +F L + G RYVRC S+K D++ I+G K
Sbjct: 1785 RRPIKAVGIIKCDKNEVDFIIRDFEKLIVDGRRYVRCAPSDKYLDNILITGLDK 1838
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 39/268 (14%)
Query: 25 AIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLIL-----GCSGHCLRREGIAL 79
A+ L LG + ++ LT GR + + ++P L K++L GCS L +
Sbjct: 893 AMEQLYSLGAL---DDEGLLTKLGRKMAEFPMDPPLSKMLLASVDLGCSDEIL-----TI 944
Query: 80 AAMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKN---K 136
AM+ +IF R + + ++D K +F +GD TLL+VY W++ KN
Sbjct: 945 IAMI-QTGNIFYRPREK--QAQADQKKARFFQAEGDHLTLLAVYESWKS-----KNFSGP 996
Query: 137 WCWENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSL 196
WC+EN + ++S+RR D +L+S +++ ++ D + + ++K I +
Sbjct: 997 WCFENFVQSRSLRRAQDVRKQLLSIMDK---------YKLDIVSAGKNFSKIRKAITAGF 1047
Query: 197 AENVATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSA 256
+ A Q GY + V +HPS +L F +P WV++ EL+ + EY+ V+
Sbjct: 1048 FFHAARKD--PQEGYRTLVENQPVYIHPSSAL--FQRQPDWVIYHELVMTTKEYMREVTV 1103
Query: 257 FDFQSLHGLHPP--PLFDVSKMEERKLQ 282
D + L L P + D +KM +RK Q
Sbjct: 1104 IDPKWLVELAPRFFKVADPTKMSKRKRQ 1131
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 40/251 (15%)
Query: 44 LTDEGRCLVKMGIEPRLGKLIL-----GCSGHCLRREGIALAAMMTNASSIFCRVGNEGD 98
LT GR + + ++P L K++L GCS L + AM+ +IF R +
Sbjct: 978 LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL-----TIIAMI-QTGNIFYRPREK-- 1029
Query: 99 KQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNK-----WCWENSINAKSMRRCHD 153
+ ++D + +F +GD TLL+VY W KNK WC+EN + ++S+RR D
Sbjct: 1030 QAQADQKRARFFQPEGDHLTLLAVYESW-------KNKNFSGPWCFENFVQSRSLRRAQD 1082
Query: 154 TYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEV 213
+L++ +++ ++ D + T ++K I + + A Q GY
Sbjct: 1083 VRKQLLTIMDK---------YKLDVVSAGKNFTKIRKAITAGFFFHAARKD--PQEGYRT 1131
Query: 214 AQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHPP--PLF 271
+ V +HPS +L F +P WV++ EL+ + EY+ V+ D + L L P +
Sbjct: 1132 LVENQPVYIHPSSAL--FQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVA 1189
Query: 272 DVSKMEERKLQ 282
D +KM +RK Q
Sbjct: 1190 DPTKMSKRKRQ 1200
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 40/251 (15%)
Query: 44 LTDEGRCLVKMGIEPRLGKLIL-----GCSGHCLRREGIALAAMMTNASSIFCRVGNEGD 98
LT GR + + ++P L K++L GCS L + AM+ +IF R +
Sbjct: 978 LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL-----TIIAMI-QTGNIFYRPREK-- 1029
Query: 99 KQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNK-----WCWENSINAKSMRRCHD 153
+ ++D + +F +GD TLL+VY W KNK WC+EN + ++S+RR D
Sbjct: 1030 QAQADQKRARFFQPEGDHLTLLAVYESW-------KNKNFSGPWCFENFVQSRSLRRAQD 1082
Query: 154 TYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEV 213
+L++ +++ ++ D + T ++K I + + A Q GY
Sbjct: 1083 VRKQLLTIMDK---------YKLDVVSAGKNFTKIRKAITAGFFFHAARKD--PQEGYRT 1131
Query: 214 AQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHPP--PLF 271
+ V +HPS +L F +P WV++ EL+ + EY+ V+ D + L L P +
Sbjct: 1132 LVENQPVYIHPSSAL--FQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVA 1189
Query: 272 DVSKMEERKLQ 282
D +KM +RK Q
Sbjct: 1190 DPTKMSKRKRQ 1200
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 39 NNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMTNASSIFCRVGNEGD 98
N ELT GR + + ++P L K+I+ + + I++AAM++ +SIF R D
Sbjct: 815 NKLGELTKVGRRMAEFPLDPMLSKMIVVSEKYKCSEDIISIAAMLSIGNSIFYR---PKD 871
Query: 99 KQ-RSDCHKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYL 156
KQ +D ++ F + GD LL VY W+ T +WC+EN I +SM+R D
Sbjct: 872 KQVHADNARLNFHTGNVGDHMALLKVYNSWKE--TNYSTQWCYENYIQVRSMKRARDIRD 929
Query: 157 ELVSCLER-ELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQ 215
+L LER E+ T P+ D +KK I S + + Y +
Sbjct: 930 QLAGLLERVEIELTT---------NPNDLDA-IKKSITSGFFPHSSKLQKNG--SYRTLK 977
Query: 216 TGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 267
G+ V +HPS L P WVV+ EL+ + EY+ ++ + L + P
Sbjct: 978 HGQTVHIHPSSGLAQVL--PKWVVYHELVLTTKEYMRQITELKAEWLLEIAP 1027
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 39 NNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMTNASSIFCRVGNEGD 98
N ELT GR + + ++P L K+I+ + + I++AAM++ +SIF R D
Sbjct: 815 NKLGELTKVGRRMAEFPLDPMLSKMIVVSEKYKCSEDIISIAAMLSIGNSIFYR---PKD 871
Query: 99 KQ-RSDCHKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYL 156
KQ +D ++ F + GD LL VY W+ T +WC+EN I +SM+R D
Sbjct: 872 KQVHADNARLNFHTGNVGDHMALLKVYNSWKE--TNYSTQWCYENYIQVRSMKRARDIRD 929
Query: 157 ELVSCLER-ELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQ 215
+L LER E+ T P+ D +KK I S + + Y +
Sbjct: 930 QLAGLLERVEIELTT---------NPNDLDA-IKKSITSGFFPHSSKLQKNG--SYRTLK 977
Query: 216 TGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 267
G+ V +HPS L P WVV+ EL+ + EY+ ++ + L + P
Sbjct: 978 HGQTVHIHPSSGLAQVL--PKWVVYHELVLTTKEYMRQITELKAEWLLEIAP 1027
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 39 NNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMTNASSIFCRVGNEGD 98
N ELT GR + + ++P L K+I+ + + I++AAM++ +SIF R D
Sbjct: 815 NKLGELTKVGRRMAEFPLDPMLSKMIVVSEKYKCSEDIISIAAMLSIGNSIFYR---PKD 871
Query: 99 KQ-RSDCHKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYL 156
KQ +D ++ F + GD LL VY W+ T +WC+EN I +SM+R D
Sbjct: 872 KQVHADNARLNFHTGNVGDHMALLKVYNSWKE--TNYSTQWCYENYIQVRSMKRARDIRD 929
Query: 157 ELVSCLER-ELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQ 215
+L LER E+ T P+ D +KK I S + + Y +
Sbjct: 930 QLAGLLERVEIELTT---------NPNDLDA-IKKSITSGFFPHSSKLQKNG--SYRTLK 977
Query: 216 TGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 267
G+ V +HPS L P WVV+ EL+ + EY+ ++ + L + P
Sbjct: 978 HGQTVHIHPSSGLAQVL--PKWVVYHELVLTTKEYMRQITELKAEWLLEIAP 1027
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 138/298 (46%), Gaps = 32/298 (10%)
Query: 4 ILILWMLQVLGLLRWR----SSIEMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPR 59
+L+L L+V LL + + + ++ QL V+ NN LT+ G +V+ ++P
Sbjct: 939 VLLLKSLKVENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGGLTELGWKMVEFPLDPP 998
Query: 60 LGKLIL-GCSGHCLRREGIALAAMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFT 118
L K++L G CL E + M + S+F R + ++ SD + +F + D T
Sbjct: 999 LAKMLLMGERLGCL--EEVLTIVSMLSVPSVFFRPKDRAEE--SDAARERFFVPESDHLT 1054
Query: 119 LLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDP 178
L +VY +W+ + + WC ++ ++ K +R+ + +L+ L + L P
Sbjct: 1055 LYNVYQQWKQ--HDYRGDWCNDHFLHVKGLRKAREVRSQLLDIL-KTLKI---------P 1102
Query: 179 YKPSFHDTNM-KKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGW 237
F DT++ +K I S+ N A G + Y + G LHPS +L P +
Sbjct: 1103 LTTCFPDTDVVRKAICSAYFHNSARLKGVGE--YVNTRNGMPCHLHPSSALYGMGCTPDY 1160
Query: 238 VVFGELLSVSNEYLVCVSAFDFQSLHGLHPPPLF------DVSKMEERKLQMKTLTGF 289
VV+ EL+ + EY+ C +A + Q + L P+F D S +E +K Q + T
Sbjct: 1161 VVYHELILTTKEYMQCATAVEPQWMAELG--PMFFSVKESDTSLLEHKKKQKREKTAM 1216
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 32/298 (10%)
Query: 4 ILILWMLQVLGLLRWR----SSIEMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPR 59
+L+L L+V LL + + + ++ QL ++ NN LT+ G +V+ ++P
Sbjct: 736 VLLLKSLKVENLLDFDFIDPPPQDNILNSMYQLWMLGALNNAGRLTELGWKMVEFPLDPP 795
Query: 60 LGKLIL-GCSGHCLRREGIALAAMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFT 118
L K++L G CL E + M + S+F R + SD + +F + D T
Sbjct: 796 LAKMLLMGEQFGCL--EEVLTIVSMLSVPSVFFRPKDRA--AESDAARERFFVPESDHLT 851
Query: 119 LLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDP 178
L +VY +W+ + + WC ++ ++ K +R+ + +L+ L + L P
Sbjct: 852 LYNVYQQWKQ--HDYRGDWCNDHFLHVKGLRKAREVRSQLLDIL-KTLKI---------P 899
Query: 179 YKPSFHDTNM-KKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGW 237
F DT++ +K I S+ N A G + Y + G LHPS +L P +
Sbjct: 900 LTTCFPDTDVVRKAICSAYFHNSARLMGVGE--YVNTRNGMPCYLHPSSALYGMGCTPEY 957
Query: 238 VVFGELLSVSNEYLVCVSAFDFQSLHGLHPPPLF------DVSKMEERKLQMKTLTGF 289
VV+ EL+ + EY+ C +A + + + L P+F D S ME +K Q + T
Sbjct: 958 VVYHELILTTKEYMQCATAVEPKWMAELG--PMFFSVTESDTSLMEHKKKQKREKTAI 1013
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 112/243 (46%), Gaps = 35/243 (14%)
Query: 21 SIEMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALA 80
+++ A+ L LG + N +LT GR + + ++P L K+I+ + E I++A
Sbjct: 645 ALKNAVELLCNLGAL---NGHVKLTKVGRRMAEFPLDPMLSKMIIASEKYKCSDEIISIA 701
Query: 81 AMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCW 139
AM++ SIF N+ K +D ++ F + GD L+VY W+ R+ WC+
Sbjct: 702 AMLSVGGSIFYSPKNK--KVHADNARMNFHTGNVGDHIAHLNVYNSWKESNYSRQ--WCY 757
Query: 140 ENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAEN 199
EN I +SM+R D +LV LER T + D +KK I S N
Sbjct: 758 ENYIQVRSMKRAKDIRDQLVGLLERIEIELTSNSNDLDA---------IKKSITSGFFPN 808
Query: 200 VA------TYSGCNQLGYEVAQTGRCVQLHPSCSLL-VFAERPGWVVFGELLSVSNEYLV 252
A TY +L QTG +HPS L VF P V++ EL+ + EYL
Sbjct: 809 TAKLQKYGTYQMVKRL-----QTG---HIHPSSGLAEVF---PRLVLYHELVLTTKEYLR 857
Query: 253 CVS 255
V+
Sbjct: 858 QVT 860
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 18/231 (7%)
Query: 25 AIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMT 84
A+ L LG I N LT G + + ++P++ K+++ E ++++AM+
Sbjct: 424 ALEVLNYLGAIDDEGN---LTKLGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSISAMVA 480
Query: 85 NASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSIN 144
+ C + ++ +D K +F H DGD TLL+VY ++ WC+EN +N
Sbjct: 481 VPN---CFIRPRDAQEAADEAKARFAHIDGDHLTLLNVYHAYKQ--NNEDPSWCYENFVN 535
Query: 145 AKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVATYS 204
++++ + +LV + R +Y+ Y N+KK +L+ VA
Sbjct: 536 HRALKSADNVRQQLVRIMARFNLKLCSTYFNSRDYY-----VNIKKAMLAGYFMQVAHLE 590
Query: 205 GCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVS 255
Y + + VQLHPS L +P WV++ E + S+ ++ V+
Sbjct: 591 RTGH--YLTVKDNQMVQLHPSNCL---DPKPEWVIYNEYVFTSDNFIRTVT 636
>Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC |
chr7:38011601-38003021 | 20130731
Length = 725
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 53/267 (19%)
Query: 26 IRNLIQLGVIKLNNNFHELTDE-GRCLVKMGIEPRLGK-LILGCSGHCLRREGIALAAMM 83
I++L QL ++ + +L+D GR + ++ ++P K LIL +CL E + +A M
Sbjct: 480 IKSLEQLFLLGALTDDCQLSDPIGRQMARLPLDPVYAKALILASQFNCL--EEMLIAVAM 537
Query: 84 TNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVY------MEWEALPTER-KN- 135
+A SIF + ++ R+ F +GD TL++VY +E + T + KN
Sbjct: 538 LSAESIFYFPREKYEEARTAAKS--FASPEGDHITLINVYRAATDFLEKRTIETNKTKNE 595
Query: 136 ----KWCWENSINAKSMRRCHDTY-----------LELVSCLERELSFFTPSYWRWDPYK 180
KWC EN IN++S+R D + L+L SC E L F
Sbjct: 596 KDFRKWCKENFINSRSLRHARDIHRQIQGHVQQMGLKLASCGEDMLQF------------ 643
Query: 181 PSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVF 240
++ +++S N A Y +G+ VQ+HPS L F ++P ++F
Sbjct: 644 --------RRCLVASFFLNAAVKQPDGT--YRALASGQVVQIHPSSVL--FRKKPECIIF 691
Query: 241 GELLSVSNEYLVCVSAFDFQSLHGLHP 267
EL+ +N+Y+ ++ D L L P
Sbjct: 692 NELIQTNNKYVRDLTRVDNLWLTELAP 718
>Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein | HC
| chr4:39455746-39462206 | 20130731
Length = 519
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 56/274 (20%)
Query: 19 RSSIEMAIRNLIQLGVIKLNNNFHELTDE-GRCLVKMGIEPRLGK-LILGCSGHCLRREG 76
R++I ++ L LG + + +L+D G + ++ ++P K LIL +CL E
Sbjct: 270 RTAIVKSLEQLFLLGAL---TDDCQLSDPVGLQMARLPLDPVYAKALILASQFNCL--EE 324
Query: 77 IALAAMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVY-----------ME 125
+ +A M +A SIF ++ ++ R+ F +GD TL++V+ +E
Sbjct: 325 MLIAVAMLSAESIFYFPRDKYEEARTAAKS--FASPEGDHITLINVFRAATDLLEKRTIE 382
Query: 126 WEALPTERK-NKWCWENSINAKSMRRCHDTY-----------LELVSCLERELSFFTPSY 173
+ E+ KWC EN IN++S+R D + L+L SC E L F
Sbjct: 383 INKMKNEKDFRKWCKENFINSRSLRHARDIHRQIQGHVQQMGLKLASCGEDMLQF----- 437
Query: 174 WRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAE 233
++ +++S N A Y +G+ VQ+HPS L F +
Sbjct: 438 ---------------RRCLVASFFLNAAVKQPDGT--YRALASGQVVQIHPSSVL--FRK 478
Query: 234 RPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 267
+P ++F EL+ +N+Y+ ++ D L L P
Sbjct: 479 KPECIIFNELIQTNNKYVRDLTRVDNLWLTELAP 512
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 23 EMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAM 82
E +R L L + ++ LT G + + ++P++ K+++ E ++++AM
Sbjct: 457 ETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAM 516
Query: 83 MTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENS 142
++ + C + ++ +D K +F H DGD TLL+VY ++ WC++N
Sbjct: 517 LSVPN---CFIRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--NNEDASWCYDNF 571
Query: 143 INAKSMRRCHDTYLELVSCLER-ELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVA 201
+N ++++ + +LV + R L + + D Y N++K +L+ VA
Sbjct: 572 VNNRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYY------VNIRKAMLAGYFMQVA 625
Query: 202 TYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVS 255
Y + + V LHPS L +P WV++ E + S ++ V+
Sbjct: 626 HLERTGH--YLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVT 674
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 48 GRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMTNASSIFCRVGNEGDKQ-RSDCHK 106
G+ + + ++P L K+I+ + E I++AAM++ +SIF R DKQ +D +
Sbjct: 581 GKRMAEFPLDPMLSKMIVASEKYKCSDEIISIAAMLSVGNSIFYR---PRDKQVHADNAR 637
Query: 107 VQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYLELVSCLERE 165
+ F D GD L V+ W+ +WC+EN + +SM+R D +L LER
Sbjct: 638 MNFHTGDVGDHIAHLKVFNSWKE--ANYSTQWCFENYVQVRSMKRARDIRDQLAGLLERV 695
Query: 166 LSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPS 225
T + D ++K ILS N A Y + + V +HPS
Sbjct: 696 EIELTSNPNNLDA---------IRKSILSGFFPNSAKLQKDGT--YRRFKHLQTVHIHPS 744
Query: 226 CSLLVFAERPGWVVFGELLSVSNEYLVCVS 255
+ P V++ EL+ + EY+ V+
Sbjct: 745 SGMAEVI--PRLVLYHELVLTTKEYMRQVT 772
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 23 EMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAM 82
E +R L L + ++ LT G+ + + ++P++ K+++ E ++++AM
Sbjct: 480 ETLMRALEVLNYLGAMDDEGNLTKLGKIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAM 539
Query: 83 MTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENS 142
++ + C + + + +D K +F H DGD TLL+VY ++ WC++N
Sbjct: 540 LSVPN---CFIRPKEAQIAADEAKARFIHVDGDHLTLLNVYHAYKQ--NNEDASWCYDNF 594
Query: 143 INAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVILSSLAENVAT 202
IN + ++ + +LV + R F D + + N++K +L+ VA
Sbjct: 595 INYRVLKSADNVRQQLVRIMAR----FNLKLCSTD-FNSRHYYVNIRKTMLAGYFMQVAH 649
Query: 203 YSGCNQLG-YEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCV 254
+ Q G Y + + V LHPS L +P WV++ E + S ++ V
Sbjct: 650 FD--QQRGRYLTVKDKQEVYLHPSNCL---DHKPEWVIYNEYVLTSRHFIRTV 697
>Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34489993-34479594 | 20130731
Length = 647
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 109/240 (45%), Gaps = 16/240 (6%)
Query: 29 LIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMTNASS 88
L QL +I + +T GR + ++ +EP L + ++ + H E + +AAM+++ ++
Sbjct: 398 LKQLYLIDAIDENGSITSVGRKMAELPLEPSLSRTLMEANNHGCITEALTVAAMLSSETA 457
Query: 89 IFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSM 148
+ K++ + GD LL ++ W T+ WC ++ + + M
Sbjct: 458 LLPGQSKTEKKRKRPISNLPDGSGLGDHIQLLQIFERWHQ--TDYDIGWCKDHGLQVRGM 515
Query: 149 RRCHDTYLELVSCLER--ELSFFTPSYWRWDPYKPSFHDTNMKKVI----LSSLAENVAT 202
D +L +++ + + + + + + N++K + + LAE
Sbjct: 516 SFARDVRKQLSQIMQKIAKEPLGIRTNGKGEEIRRDYR--NLRKALCVGYANQLAERKMH 573
Query: 203 YSGCNQLGYEVAQTGRCVQLHPSCSLLV--FAERPGWVVFGELLSVSNEYLVCVSAFDFQ 260
++G LG++ G+ VQ+HPS +L F + P +VV+ EL++ ++ V + + +
Sbjct: 574 HNGYRTLGFQ----GQVVQVHPSSALSSDEFGKFPDYVVYHELIATPRPFMRNVCSVEMK 629
>Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490015-34479594 | 20130731
Length = 697
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 109/240 (45%), Gaps = 16/240 (6%)
Query: 29 LIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMTNASS 88
L QL +I + +T GR + ++ +EP L + ++ + H E + +AAM+++ ++
Sbjct: 398 LKQLYLIDAIDENGSITSVGRKMAELPLEPSLSRTLMEANNHGCITEALTVAAMLSSETA 457
Query: 89 IFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSM 148
+ K++ + GD LL ++ W T+ WC ++ + + M
Sbjct: 458 LLPGQSKTEKKRKRPISNLPDGSGLGDHIQLLQIFERWHQ--TDYDIGWCKDHGLQVRGM 515
Query: 149 RRCHDTYLELVSCLER--ELSFFTPSYWRWDPYKPSFHDTNMKKVI----LSSLAENVAT 202
D +L +++ + + + + + + N++K + + LAE
Sbjct: 516 SFARDVRKQLSQIMQKIAKEPLGIRTNGKGEEIRRDYR--NLRKALCVGYANQLAERKMH 573
Query: 203 YSGCNQLGYEVAQTGRCVQLHPSCSLLV--FAERPGWVVFGELLSVSNEYLVCVSAFDFQ 260
++G LG++ G+ VQ+HPS +L F + P +VV+ EL++ ++ V + + +
Sbjct: 574 HNGYRTLGFQ----GQVVQVHPSSALSSDEFGKFPDYVVYHELIATPRPFMRNVCSVEMK 629
>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr8:15840782-15843798 | 20130731
Length = 650
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 44 LTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMTNASSIFCRVGNEGDKQ-RS 102
LT GR + + ++P L K+I+ + E I++A+M++ +SIF R DKQ +
Sbjct: 421 LTKVGRRMAEFPLDPMLSKMIVASEKYKCSDEIISIASMLSVGNSIFYR---PKDKQVHA 477
Query: 103 DCHKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYLELVSC 161
D ++ F D GD L VY W+ +WC+EN I +SM+R D +L+
Sbjct: 478 DNARMNFHTGDVGDHIAHLKVYSTWKQ--ANYSTRWCYENYIQVRSMKRARDIRDQLLGL 535
Query: 162 LER 164
L++
Sbjct: 536 LDK 538
>Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC |
chr2:4513881-4525364 | 20130731
Length = 701
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 109/238 (45%), Gaps = 25/238 (10%)
Query: 25 AIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMT 84
A+ L LG+ L+++ + G + ++ ++P + K+I+ S E I +AA ++
Sbjct: 464 ALEVLYSLGI--LDDDAKLTSPTGFQVAEIPLDPMISKMIIASSQLGCSEEIITIAAALS 521
Query: 85 NASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSIN 144
SI+ + G ++ SD K++F +GD T L+VY + + + ++WC +N +N
Sbjct: 522 -VQSIW--ISGRGIQKESDEAKLRFAAAEGDHVTFLNVYKGFHQ--SRKSSQWCHKNFVN 576
Query: 145 AKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNM---KKVILSSLAENVA 201
+M++ + +L +R + S +++M KK +++ N
Sbjct: 577 YHAMKKVLEVREQLRRIAQR-IGLVLKSC-----------ESDMQVVKKAVIAGFFANAC 624
Query: 202 TYSGCNQLG-YEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFD 258
+ G Y+ + V +HPS L F P WV+F L+S +Y+ V D
Sbjct: 625 RLEPYSPDGMYKTLRGSEEVYIHPSSVL--FRVNPKWVIFNSLVSTDRKYMRNVMTID 680
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 24 MAIRNLIQL-GVIKLNNNFHELTDEGRCLVKMGIEPRLGK-LILGCSGHCLRREGIALAA 81
+A++N I+L I +N ELT GR L + ++P +GK L++G CL + +AA
Sbjct: 683 LAVQNAIELLKTIGALDNKEELTPLGRHLCTVPLDPNIGKMLLMGSIFQCL-SPALTIAA 741
Query: 82 MMTNASSIFCRVGNEGDKQRSDCHKVQF-CHRDGDLFTLLSVYMEWEALPTERKNK-WCW 139
+ + + K+ +D K F C D L+ + EW+ + K +CW
Sbjct: 742 SLAYRNPFVLPINR---KKEADEAKRYFACDSRSDHLALVEAFEEWKDAKSRGDEKNFCW 798
Query: 140 ENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSFHDTNMKKVIL-SSLAE 198
EN ++ ++R D + ++ L ++ F S Y HD M IL + L
Sbjct: 799 ENFLSPATLRLIDDMRTQFLNLLS-DIGFVDKSKG-VQAYNQQSHDLEMVCAILCAGLYP 856
Query: 199 NVATYSGCNQLGYEVA----QTGRCVQLHPSCSLLVFAERP-GWVVFGELLSVSNEYL 251
NV C + G+ A + G+ V +HPS P ++V+ E + ++ Y+
Sbjct: 857 NVVQ---CKRRGHRTAFYTKEAGK-VDIHPSSVNAGVHSFPLPYLVYSEKVKTTSIYI 910
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 21 SIEMAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALA 80
+++ A+ L LG + N +LT GR + + ++P L K+I+ + E I++A
Sbjct: 645 ALKNAVELLCNLGAL---NGHVKLTKVGRRMAEFPLDPMLSKMIIASEKYKCSDEIISIA 701
Query: 81 AMMTNASSIFCRVGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCW 139
AM++ SIF N+ K +D ++ F + GD L+VY W+ R +WC+
Sbjct: 702 AMLSVGGSIFYSPKNK--KVHADNARMNFHTGNVGDHIAHLNVYNSWKESNYSR--QWCY 757
Query: 140 ENSINAKS 147
EN I S
Sbjct: 758 ENYIQMPS 765