Miyakogusa Predicted Gene

Lj5g3v2266310.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2266310.1 Non Characterized Hit- tr|D7TLY6|D7TLY6_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,40,2e-16,no
description,NULL; F-box domain,F-box domain, cyclin-like,CUFF.57144.1
         (392 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g115400.1 | F-box plant-like protein | HC | chr1:52098889-...   561   e-160
Medtr7g023360.1 | F-box plant-like protein | HC | chr7:7659381-7...   491   e-139
Medtr1g115385.1 | F-box plant-like protein | HC | chr1:52091351-...   177   2e-44
Medtr7g050670.1 | FBD-associated F-box plant protein | LC | chr7...    52   1e-06

>Medtr1g115400.1 | F-box plant-like protein | HC |
           chr1:52098889-52096685 | 20130731
          Length = 390

 Score =  561 bits (1445), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/392 (71%), Positives = 321/392 (81%), Gaps = 2/392 (0%)

Query: 1   MEDSVEDLFRNLPVEILSSIVSFLPKESALEPSLISIRWRDLWNKVLVRHGTRDDVTGVV 60
           ME+SV++LFR LP EIL  IVSFLP E ALE SLIS RWRDLWN VLV+HGT +D+TG V
Sbjct: 1   MEESVQNLFRYLPDEILGCIVSFLPNEYALETSLISTRWRDLWNHVLVKHGTMEDITGAV 60

Query: 61  AGFLSSFEELEPLKHPHKLQFHFAEDSSVLFANIATNSKLLLDFSAVKKEFERSYELHFK 120
           A FL++F+EL+PLK P KL+FHFA+D+++L A IATNSKLLLDFS   K+ ER YEL FK
Sbjct: 61  AEFLANFDELDPLKRPCKLRFHFADDNALL-AAIATNSKLLLDFSYGMKKIERKYELRFK 119

Query: 121 FSTQQQITNKPSFMVKILYLKSVSNLASEAVSSIVSNLEHLENLVIMDCSGLQSLFIESE 180
              +Q  T    F+ K LYLKS+S L SE  SSIVSNL+HLENL I DC GLQSLFIESE
Sbjct: 120 LD-KQNFTYHSVFLFKSLYLKSLSYLTSEVASSIVSNLDHLENLTITDCCGLQSLFIESE 178

Query: 181 SKLHKLTILDCLKLKSLHLRTSKLKSFKYHGPFPRIWPESHFNLSDATLDFRLGPCSSDF 240
           SKLHKLTILDCL+LKSLHLRTSKLKSF+Y G  PRIWPESHFNL  A LDFR G    D 
Sbjct: 179 SKLHKLTILDCLQLKSLHLRTSKLKSFRYRGLLPRIWPESHFNLCHAILDFRQGLSCRDL 238

Query: 241 KAQDFNETLLTIKNSQVLTICKWTFEALIWPSISPSSGNFIFYKLRELWWIDNHVYENSI 300
            AQDF+E LLTIKNS+VLT+C+WTFE LIWPSISPSSG+FIFYKL+ELWWIDNH  ENSI
Sbjct: 239 SAQDFDEILLTIKNSEVLTLCEWTFETLIWPSISPSSGSFIFYKLKELWWIDNHENENSI 298

Query: 301 DALVSFLKLCPALEQLFVTIDPKSFSTPRSNSGLMQAAKYTELEHLKLIKFVGFTNQVDE 360
           +AL+SFLKLCPALEQL +TID  S+S P+SN G +QA KYTELEHLKL+KF GFTN + E
Sbjct: 299 NALISFLKLCPALEQLVITIDRNSYSAPQSNLGSIQATKYTELEHLKLVKFKGFTNPIAE 358

Query: 361 ISVAKILIKVVKGKPPKIETSNGSYLDAVYMQ 392
           ISVAKILI++VKGKPPKIETS+GS LD   MQ
Sbjct: 359 ISVAKILIQLVKGKPPKIETSSGSNLDVAIMQ 390


>Medtr7g023360.1 | F-box plant-like protein | HC |
           chr7:7659381-7661593 | 20130731
          Length = 401

 Score =  491 bits (1265), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/396 (63%), Positives = 308/396 (77%), Gaps = 12/396 (3%)

Query: 2   EDSVEDLFRNLPVEILSSIVSFLPKESALEPSLISIRWRDLWNKVLVRHGTRDDVTGVVA 61
           E++ +DLF NLP EI+  IVSFLP ES++E  LIS RWRDLWN+ +VR+GT++++T VV 
Sbjct: 4   ENTSKDLFSNLPKEIIGRIVSFLPNESSMETILISTRWRDLWNETIVRYGTKEEITSVVT 63

Query: 62  GFLSSFEELEPLKHPHKLQFHFAEDSSVLFANIATNSKLLLDFSAVKKEF----ERSYEL 117
            FL+SF++L+PLKHP KLQFH+ +   VL A IA NSKLLLDFS +KKEF    +  +EL
Sbjct: 64  KFLTSFDDLDPLKHPRKLQFHYED--KVLLATIANNSKLLLDFSPLKKEFIENIQMHFEL 121

Query: 118 HFKFSTQQQITNKP----SFMVKILYLKSVSNLASEAVSSIVSNLEHLENLVIMDCSGLQ 173
           HFK + QQ+I+ K      F +K LYLKS+S L SE  SSI+S+L+HLENLVI+ C+GLQ
Sbjct: 122 HFKLNNQQKISYKSFTCNIFSLKSLYLKSISYLTSEVASSIISSLDHLENLVIISCNGLQ 181

Query: 174 SLFIESESKLHKLTILDCLKLKSLHLRTSKLKSFKYHGPFPRIWPESHFNLSDATLDFRL 233
           SL I+S  +LHKLTILDCL+LK LHL+TSKLKSF++ GP P I PE HFNLSDA LDFRL
Sbjct: 182 SLSIDSNFELHKLTILDCLQLKYLHLKTSKLKSFQFRGPLPWILPEFHFNLSDAMLDFRL 241

Query: 234 GPCSSDFKAQDFNETLLTIKNSQVLTICKWTFEALIWPSISPSSGNFIFYKLRELWWIDN 293
           GP   +FK +DF+ TLLTIKNSQVLT+C+WTFE LIWPSI P  G F FY LRELWWIDN
Sbjct: 242 GPSCGNFKTKDFDATLLTIKNSQVLTLCRWTFEELIWPSICPPYGCFNFYNLRELWWIDN 301

Query: 294 HVYENSIDALVSFLKLCPALEQLFVT--IDPKSFSTPRSNSGLMQAAKYTELEHLKLIKF 351
           +  E  +DAL SFLKLCP+LEQLFVT  ID KS+ST RS S  MQA K T+LEH+ LIKF
Sbjct: 302 YKDEYCMDALFSFLKLCPSLEQLFVTVQIDAKSYSTGRSVSWFMQATKCTKLEHVNLIKF 361

Query: 352 VGFTNQVDEISVAKILIKVVKGKPPKIETSNGSYLD 387
           +GFT++ DEIS+AK LI ++KGK PKI  S+GS LD
Sbjct: 362 MGFTSRKDEISLAKCLIHLIKGKLPKINISDGSCLD 397


>Medtr1g115385.1 | F-box plant-like protein | HC |
           chr1:52091351-52090920 | 20130731
          Length = 143

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/135 (68%), Positives = 104/135 (77%), Gaps = 2/135 (1%)

Query: 100 LLLDFSAVKKEFERSYELHFKFSTQQQITN--KPSFMVKILYLKSVSNLASEAVSSIVSN 157
           L LDFS+ K + ER YEL FK + Q  I N   P+F+VK L LKS++ L SE  SSIVSN
Sbjct: 9   LQLDFSSEKDKIERKYELQFKLNEQHFIYNIVPPTFLVKSLCLKSLTYLTSEVTSSIVSN 68

Query: 158 LEHLENLVIMDCSGLQSLFIESESKLHKLTILDCLKLKSLHLRTSKLKSFKYHGPFPRIW 217
           L+HLENL+I DC GLQSLF+ESESK  KLTILDCL+LKSLHL TSKLKSF+Y GP PRIW
Sbjct: 69  LDHLENLMITDCCGLQSLFVESESKFLKLTILDCLQLKSLHLSTSKLKSFRYRGPLPRIW 128

Query: 218 PESHFNLSDATLDFR 232
           P SHFNL  A LDFR
Sbjct: 129 PGSHFNLCHAILDFR 143


>Medtr7g050670.1 | FBD-associated F-box plant protein | LC |
           chr7:16903910-16901558 | 20130731
          Length = 474

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 14/180 (7%)

Query: 154 IVSNLEHLENLVIMDCSGLQSLFIESESKLH--KLTILDCLKLKSLHLRTSKLKSFKYHG 211
           ++ + + LE +V+++CS ++ L + +    H  +L I  C  LK + + +  L S  YHG
Sbjct: 186 LIEHCKMLEMIVLINCSTIKKLKLIARQNKHFKELRIDYCEDLKEIEIDSPTLSSIFYHG 245

Query: 212 PFPRIWPESHFNLSDATLDFRLGPCSSDFKAQDFNETLLTIKNSQVLTICKWTFEALIWP 271
            FP I       L DA   FR  P     ++           +  +LT      E +   
Sbjct: 246 KFPIIRIAQGMQLYDAL--FRFTPSREYMQSTQLEALAKDFLHVSILTTTPQLIEGM--- 300

Query: 272 SISPSSG-----NFIFYKLREL-WWIDNHVYENSIDALVSFLKLCPALEQLFVTIDPKSF 325
           ++    G      + F  LREL  ++D   + N  D +  FLK CP+L +LF+ +    F
Sbjct: 301 AVRIRDGVLREAQYCFVNLRELQLFMDGAKFCNPYD-ITMFLKNCPSLVKLFIDLKNYKF 359