Miyakogusa Predicted Gene

Lj5g3v2266290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2266290.1 Non Characterized Hit- tr|B5A4K2|B5A4K2_GYMST
Putative SNF4 kinase-activating protein
OS=Gymnochlora,24.2,0.00000000000001,coiled-coil,NULL; Domain in
cystathionine beta-synthase and ot,Cystathionine beta-synthase, core;
CB,CUFF.57141.1
         (420 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103910.1 | AMP-activated kinase, gamma regulatory subunit...   592   e-169
Medtr2g103890.1 | AMP-activated kinase, gamma regulatory subunit...   119   6e-27

>Medtr2g103910.1 | AMP-activated kinase, gamma regulatory subunit,
           putative | HC | chr2:44753006-44750781 | 20130731
          Length = 382

 Score =  592 bits (1527), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 301/386 (77%), Positives = 323/386 (83%), Gaps = 7/386 (1%)

Query: 32  MQQQMKEVKSTMQRSESMRLKERKVGDLMVDQKKRLVEVPYTASLAHTMNTLVANKXXXX 91
           MQ QMK+    MQ  ESM LKE+KV DLMV+ KKRLVEVPYTASL  TMNTLVANK    
Sbjct: 1   MQNQMKDYNQ-MQHCESMNLKEKKVKDLMVN-KKRLVEVPYTASLGQTMNTLVANKVVAV 58

Query: 92  XXXXXXGQWIGAGGSMIVESDKQTGAVRKHYIGMVTMLDIVAHIAXXXXXXXXXXXXXXX 151
                 GQWIGAGGSMIVESDKQTGAVRKHYIGMVTMLDIVAHIA               
Sbjct: 59  PVAAPPGQWIGAGGSMIVESDKQTGAVRKHYIGMVTMLDIVAHIAGDDHLSGGDDVEEDL 118

Query: 152 XXXXQKMCVPVSSIIGHSFEGLSLWTLNPNTSLLDCMEVFSKGVHRAMVPIDSHMENVST 211
               Q+M VPVSSIIGHSFEGLSLWTLNPNTSLLDCMEV SKGVHRAM+P DS +ENVS 
Sbjct: 119 D---QRMSVPVSSIIGHSFEGLSLWTLNPNTSLLDCMEVLSKGVHRAMIPTDSQIENVSA 175

Query: 212 GVELVESASGYQMLTQMDVLRFLKDHAGELQSIL-SCSVQDLGANTERIYAITDKTKLVD 270
           GVEL+ES+S YQMLTQMDVLRFLKDH  ELQS L S SVQDLGA TERIYAIT++TKL+D
Sbjct: 176 GVELIESSSSYQMLTQMDVLRFLKDHGNELQSTLHSHSVQDLGAITERIYAITERTKLID 235

Query: 271 AIKCLKAAMLNAVPIVEASDLGEDDHKQHINGRCRKLIGTFSATDLRGCYLATLKSWLGI 330
           AIKCLKAAMLNA+PIV ASD+G+DDHKQHINGRCRKL+GTFSATDLRGCY+ TLKSWLGI
Sbjct: 236 AIKCLKAAMLNALPIVRASDVGDDDHKQHINGRCRKLVGTFSATDLRGCYINTLKSWLGI 295

Query: 331 SALAFTEEIATSPLFTASDTQN-TGTSKRELVTCHAESPLSEVIDKALTNHVHRVWVVDQ 389
           SALAFTE+IATSPL+T SDTQN  GT KRELVTC+AES LSEVIDKA+ NHVHRVWVVDQ
Sbjct: 296 SALAFTEQIATSPLYTTSDTQNDIGTPKRELVTCYAESTLSEVIDKAVANHVHRVWVVDQ 355

Query: 390 EGLLMGVVSLTDVIRVMRQSMLSQLD 415
           EGLL+GVVSLTDVIRV+RQSMLS  D
Sbjct: 356 EGLLVGVVSLTDVIRVIRQSMLSDAD 381


>Medtr2g103890.1 | AMP-activated kinase, gamma regulatory subunit,
           putative | HC | chr2:44745506-44744320 | 20130731
          Length = 110

 Score =  119 bits (298), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 72/98 (73%), Gaps = 16/98 (16%)

Query: 316 LRGCYLATLKSWLGISALAFTEEIATSPLFTASDTQN-TGTSKRELVTCHAESPLSEVID 374
           L   Y +TLKSWLG SALAFT++IATSPL+T SDT N  GT +REL              
Sbjct: 28  LGNGYTSTLKSWLGTSALAFTKQIATSPLYTTSDTHNDIGTPRREL-------------- 73

Query: 375 KALTNHVHRVWVVDQEGLLMGVVSLTDVIRVMRQSMLS 412
            A+ NHVHRVWVVDQEGLL+GVVSLTDVIRV+RQSMLS
Sbjct: 74  -AVANHVHRVWVVDQEGLLVGVVSLTDVIRVIRQSMLS 110