Miyakogusa Predicted Gene

Lj5g3v2264210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2264210.1 Non Characterized Hit- tr|I1NF10|I1NF10_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38673 PE,91.49,2e-16,
,CUFF.57129.1
         (57 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g115355.1 | transmembrane protein, putative | HC | chr1:52...    84   2e-17

>Medtr1g115355.1 | transmembrane protein, putative | HC |
          chr1:52060831-52060117 | 20130731
          Length = 53

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 46/53 (86%)

Query: 1  MELKNVVKDKKFWVASFLIAWAAALQGHMMWLQRQDSFKHKFRNLDDDDRSDE 53
          MELK V+KDKKFW ASFLI WAAALQGHMMWLQRQDSFK KF +L++D  +++
Sbjct: 1  MELKKVMKDKKFWFASFLITWAAALQGHMMWLQRQDSFKQKFPDLENDQTTNQ 53