Miyakogusa Predicted Gene
- Lj5g3v2264200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2264200.1 tr|B6TZ04|B6TZ04_MAIZE Zinc finger, C2H2 type
family protein OS=Zea mays PE=2 SV=1,44.74,6,zf-C2H2_6,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; zinc finger,Zinc finger,
C2H2-like;,CUFF.57128.1
(180 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g115345.1 | C2H2-type zinc finger protein | HC | chr1:5205... 164 5e-41
Medtr7g023560.1 | C2H2-type zinc finger protein | HC | chr7:7688... 144 5e-35
Medtr1g067650.1 | C2H2 type zinc finger transcription factor fam... 124 6e-29
Medtr1g067640.1 | C2H2 type zinc finger transcription factor fam... 122 2e-28
Medtr1g067660.1 | Cys2-His2 zinc finger transcription factor | H... 111 4e-25
Medtr7g100100.1 | Cys2-His2 zinc finger transcription factor | H... 110 8e-25
Medtr2g096540.1 | C2H2 type zinc finger transcription factor fam... 102 1e-22
Medtr1g090703.1 | C2H2-type zinc finger protein | HC | chr1:4068... 101 5e-22
Medtr2g084315.1 | C2H2-type zinc finger protein | HC | chr2:3550... 84 6e-17
Medtr1g062780.1 | C2H2-type zinc finger protein | HC | chr1:2750... 82 4e-16
Medtr4g057230.1 | C2H2-type zinc finger protein, putative | HC |... 76 2e-14
Medtr0160s0030.1 | C2H2-type zinc finger protein, putative | HC ... 72 3e-13
Medtr4g027440.1 | Cys2/His2 zinc-finger transcription factor | H... 72 3e-13
Medtr4g028610.1 | Cys2/His2 zinc-finger transcription factor | H... 70 1e-12
Medtr1g106730.1 | C2H2-type zinc finger protein | HC | chr1:4824... 68 4e-12
Medtr1g018420.1 | C2H2-type zinc finger protein | HC | chr1:5294... 68 5e-12
Medtr1g077730.1 | C2H2-type zinc finger protein | HC | chr1:3471... 64 9e-11
Medtr3g102980.1 | C2H2-type zinc finger protein | HC | chr3:4743... 64 1e-10
Medtr1g077700.1 | C2H2 and C2HC zinc finger protein | LC | chr1:... 63 1e-10
Medtr4g109340.1 | C2H2-type zinc finger protein | HC | chr4:4540... 59 2e-09
Medtr3g023760.1 | C2H2-type zinc finger protein | HC | chr3:7235... 54 6e-08
Medtr5g062300.1 | C2H2-type zinc finger protein | HC | chr5:2586... 53 1e-07
Medtr4g073310.1 | C2H2-type zinc-finger protein | LC | chr4:2773... 52 2e-07
Medtr1g052185.1 | C2H2 and C2HC zinc finger protein | LC | chr1:... 51 5e-07
Medtr5g076290.1 | two zinc finger transport-like protein, putati... 50 1e-06
>Medtr1g115345.1 | C2H2-type zinc finger protein | HC |
chr1:52052229-52053348 | 20130731
Length = 205
Score = 164 bits (414), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 116/206 (56%), Gaps = 31/206 (15%)
Query: 2 MKREFREIDH---SITMANYLMLLSQQGGPYETTTTYVXXXXXXXXRVFECKTCNRKFQS 58
MKRE RE DH SITMA YLMLLS G + V RVFECKTC R+F S
Sbjct: 1 MKRE-RETDHNTNSITMAKYLMLLS---GGSDKIFDQVNYSSNFNNRVFECKTCKRQFSS 56
Query: 59 FQALGGHRASHKKPRLEDGGESND--HGS---SPPKAKTHECSICGLEFSIGQALGGHMR 113
FQALGGHRASHKKPRL + D HGS S KAKTH CSICGLEF IGQALGGHMR
Sbjct: 57 FQALGGHRASHKKPRLMEMTSDGDDHHGSILTSTTKAKTHACSICGLEFGIGQALGGHMR 116
Query: 114 RH-KTPSNKXXXXX----------------XXXXXXXXXXXXXXANREKEN-RRVLFPDL 155
RH +T S+K A R K N +R LF DL
Sbjct: 117 RHRRTESSKANNSNGNMHNFMTTTTTSSSNSGCSTIDNSTNTDSAKRSKGNSKRFLFLDL 176
Query: 156 NLTPIENGLVFLKIGQATP-LVDCFN 180
N TP+EN L FLK+GQ TP LVD FN
Sbjct: 177 NFTPLENDLKFLKVGQPTPNLVDRFN 202
>Medtr7g023560.1 | C2H2-type zinc finger protein | HC |
chr7:7688191-7687352 | 20130731
Length = 184
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 111/189 (58%), Gaps = 17/189 (8%)
Query: 2 MKREFREIDHSITMANYLMLLSQQGGPYETTTTYVXXXXXXXXRVFECKTCNRKFQSFQA 61
MKR RE+D SITMAN LMLLS+ +E T + RVFECKTCNR+F SFQA
Sbjct: 1 MKRA-REVD-SITMANCLMLLSRGSDQFEATYSSTTSNN----RVFECKTCNRQFPSFQA 54
Query: 62 LGGHRASHKKPRLEDGGESNDHGSSPPKAKTHECSICGLEFSIGQALGGHMRRHKTPS-- 119
LGGHRASHKKPRL +PPK KTHECSICGLEF+IGQALGGHMRRH+ +
Sbjct: 55 LGGHRASHKKPRLMGENIDGQLLHTPPKPKTHECSICGLEFAIGQALGGHMRRHRAANMN 114
Query: 120 ------NKXXXXXXXXXXXXXXXXXXXANREKENRR--VLFPDLNLTPIENGLVFLKIGQ 171
N + N+R VL DLNLTP EN + FLKIG+
Sbjct: 115 GNKNMHNSNNTMSCSSGGGGDSSIDSSQKMKARNKRVLVLDLDLNLTPFENDMEFLKIGK 174
Query: 172 ATP-LVDCF 179
AT L+D F
Sbjct: 175 ATANLIDYF 183
>Medtr1g067650.1 | C2H2 type zinc finger transcription factor family
protein | HC | chr1:29206724-29207532 | 20130731
Length = 171
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 93/179 (51%), Gaps = 14/179 (7%)
Query: 1 MMKREFR-EIDHSITMANYLMLLSQQGGPYETTTTYVXXXXXXXXRVFECKTCNRKFQSF 59
MMKR+ E SI +A LMLLS + T + V FECKTCNRKF SF
Sbjct: 1 MMKRQRENEEKESIDLATTLMLLSSRITQQNKTYSPVE---------FECKTCNRKFSSF 51
Query: 60 QALGGHRASHKKPRLEDGGESNDHGSSPPKAKTHECSICGLEFSIGQALGGHMRRHKTPS 119
QALGGHRASHKK +L D E++ K K H+CSICG EF +GQALGGHMRRH+
Sbjct: 52 QALGGHRASHKKLKLLDSEEAHKVNIHNNKPKMHQCSICGQEFKLGQALGGHMRRHRI-- 109
Query: 120 NKXXXXXXXXXXXXXXXXXXXANREKENRRVLFP-DLNLTPIENGLVFLKIGQATPLVD 177
N R R ++ DLNLTP+EN L L G P VD
Sbjct: 110 NNEGFSSSSINYQVIAKSSPVLKRSNSKRVMIMELDLNLTPLENDLKLL-FGNKAPKVD 167
>Medtr1g067640.1 | C2H2 type zinc finger transcription factor family
protein | HC | chr1:29199780-29200410 | 20130731
Length = 170
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 2 MKREFR-EIDHSITMANYLMLLSQQGGPYETTTTYVXXXXXXXXRVFECKTCNRKFQSFQ 60
MKR+ E SI +A LMLLS + T + V FECKTCNRKF SFQ
Sbjct: 1 MKRQRENEEKESINLATTLMLLSSRITQQNKTYSPVE---------FECKTCNRKFSSFQ 51
Query: 61 ALGGHRASHKKPRLEDGGESNDHGSSPPKAKTHECSICGLEFSIGQALGGHMRRHKTPSN 120
ALGGHRASHKK +L D E++ K K H+CSICG EF +GQALGGHMRRH+ N
Sbjct: 52 ALGGHRASHKKLKLLDSEEAHKVNIHNNKPKMHQCSICGQEFKLGQALGGHMRRHRI--N 109
Query: 121 KXXXXXXXXXXXXXXXXXXXANREKENRRVLFP-DLNLTPIENGLVFLKIGQATPLVD 177
R R ++ DLNLTP+EN L L G P VD
Sbjct: 110 NEGFSSSSINYQVIAKSSPVLKRSNSKRVMIMELDLNLTPLENDLKLL-FGNNAPKVD 166
>Medtr1g067660.1 | Cys2-His2 zinc finger transcription factor | HC |
chr1:29213057-29213587 | 20130731
Length = 165
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 89/171 (52%), Gaps = 17/171 (9%)
Query: 12 SITMANYLMLLSQQGGPYETTTTYVXXXXXXXXRVFECKTCNRKFQSFQALGGHRASHKK 71
+I +AN L+LLS P ET FEC TCNRKF SFQALGGHRASHK+
Sbjct: 8 NIDLANCLILLSH---PKETKPKKHFSPVE-----FECTTCNRKFSSFQALGGHRASHKR 59
Query: 72 PRLEDGGESNDHGSS---PPKAKTHECSICGLEFSIGQALGGHMRRHKTPSNKXXXXXXX 128
P+L D + H + K H C ICG EFS+GQALGGHMRRHK N+
Sbjct: 60 PKL-DTLKLKLHAQTLGLLNNPKMHGCYICGKEFSLGQALGGHMRRHKISVNEGFSSVKK 118
Query: 129 XXXXXXXXXXXXANREKENRRVLFPDLNLTPIENGLVFLKIGQATPLVDCF 179
N ++RV+ DLNLTP++N L L G P VD F
Sbjct: 119 NKVVGKIPTLKRLN----SKRVMCLDLNLTPLQNDLKLL-FGNMAPKVDSF 164
>Medtr7g100100.1 | Cys2-His2 zinc finger transcription factor | HC |
chr7:40244051-40243268 | 20130731
Length = 165
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 2 MKREFREIDHSITMANYLMLLS-QQGGPYETTTTYVXXXXXXXXRVFECKTCNRKFQSFQ 60
MKR+ + I AN LMLLS Q YE +ECKTCN+KF SFQ
Sbjct: 3 MKRQ--RSNEGIDYANCLMLLSCPQQKSYENGE-------------YECKTCNKKFSSFQ 47
Query: 61 ALGGHRASHKKPRLEDGGESNDHGSSPP---KAKTHECSICGLEFSIGQALGGHMRRHKT 117
ALGGHRASHK+ +L +G E + S K K HECSICG+ FS+GQALGGHMR+H+
Sbjct: 48 ALGGHRASHKRMKLAEGEELKEQAKSLSLWNKPKMHECSICGMGFSLGQALGGHMRKHRA 107
Query: 118 PSNKXXXXXXXXXXXXXXXXXXXANREKENRRVLFPDLNLTPIEN-GLVFLKIGQATPL 175
N+ + ++R++ DLNLTP+EN L+F TP+
Sbjct: 108 VINEGVSSINQIIEKFPVL------KRLNSKRIMGLDLNLTPLENDDLMFGIKSPPTPI 160
>Medtr2g096540.1 | C2H2 type zinc finger transcription factor family
protein, putative | HC | chr2:41234502-41235280 |
20130731
Length = 133
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 79/150 (52%), Gaps = 31/150 (20%)
Query: 17 NYLMLLSQQGGPYETTTTYVXXXXXXXXRVFECKTCNRKFQSFQALGGHRASHKKPRLED 76
N LMLLS+ G E T F+CKTCN++F SFQALGGHRASHK+P+L
Sbjct: 12 NCLMLLSKVGETKEPNTLKECG--------FKCKTCNKEFSSFQALGGHRASHKRPKLM- 62
Query: 77 GGESNDHGSSPPKAKTHECSICGLEFSIGQALGGHMRRHKTPSNKXXXXXXXXXXXXXXX 136
+ K K H C ICGLEFSIGQALGGHMR+H +
Sbjct: 63 ------YKLPNMKPKMHPCPICGLEFSIGQALGGHMRKHNS----------------SFS 100
Query: 137 XXXXANREKENRRVLFPDLNLTPIENGLVF 166
+ ++ R DLNLTP+ENGLV+
Sbjct: 101 IFKKSKKDHCERLNFCLDLNLTPLENGLVW 130
>Medtr1g090703.1 | C2H2-type zinc finger protein | HC |
chr1:40689061-40690814 | 20130731
Length = 355
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 90/209 (43%), Gaps = 56/209 (26%)
Query: 9 IDHSITMANYLMLLSQQGGPYETTTT-------------------YVXXXXXXXXR---- 45
ID MAN L+LL+Q G E++T ++ R
Sbjct: 96 IDEEYDMANCLILLAQ-GQAKESSTKNTDDLDGGMMNYTKYSSRKFMEAATLDSGRAGFY 154
Query: 46 VFECKTCNRKFQSFQALGGHRASHKKPR------------------------------LE 75
V+ECKTCNR F SFQALGGHRASHKKP+ L
Sbjct: 155 VYECKTCNRTFPSFQALGGHRASHKKPKALAIAQEKKHLYDDDQEFQFKPNHKSISLQLN 214
Query: 76 DGGESNDHGSSPP--KAKTHECSICGLEFSIGQALGGHMRRHKTPSNKXXXXXXXXXXXX 133
+ G+ N HG S K+K HECSICG EF+ GQALGGHMRRH+ P
Sbjct: 215 NNGKGNLHGGSNNNNKSKVHECSICGSEFTSGQALGGHMRRHRAPVGTSAANTTLSLTTM 274
Query: 134 XXXXXXXANREKENRRVLFPDLNLTPIEN 162
R+K N L DLNL E+
Sbjct: 275 ALEPDEDHPRKKRNVLSLDLDLNLPAPED 303
>Medtr2g084315.1 | C2H2-type zinc finger protein | HC |
chr2:35505557-35506438 | 20130731
Length = 293
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 63/138 (45%), Gaps = 51/138 (36%)
Query: 23 SQQGGPYETTTTYVXXXXXXXXRVFECKTCNRKFQSFQALGGHRASHKKPRLEDGGESND 82
SQQ Y TTT +ECKTCNR F SFQALGGHRASHKKP++++ D
Sbjct: 103 SQQVDGYNKTTT--EKETKNGFDSYECKTCNRFFHSFQALGGHRASHKKPKMKE-----D 155
Query: 83 HGSSPPKA--------------------------------------------KTHECSIC 98
SSPP+ K H CSIC
Sbjct: 156 KQSSPPRPRQLITATGEFEQENKQIHPKNINPLVPPVSLELRCGVNINFKPNKVHGCSIC 215
Query: 99 GLEFSIGQALGGHMRRHK 116
G EF+ GQALGGHMRRH+
Sbjct: 216 GAEFTSGQALGGHMRRHR 233
>Medtr1g062780.1 | C2H2-type zinc finger protein | HC |
chr1:27509884-27508558 | 20130731
Length = 297
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 75/181 (41%), Gaps = 52/181 (28%)
Query: 46 VFECKTCNRKFQSFQALGGHRASHKKPRLEDGGES------------NDH---------- 83
++ECKTCNR F SFQALGGHRASH KP + + +DH
Sbjct: 119 LYECKTCNRCFPSFQALGGHRASHTKPNKANCNVAQQKQAVTTSSFVDDHYDPTMNTILS 178
Query: 84 -----------GSSPPKAKTHECSICGLEFSIGQALGGHMRRHKTPSNKXXXXXXXXXXX 132
+ K+K HECSICG EFS GQALGGHMRRH+ N
Sbjct: 179 LQAFAATPITTIPTTKKSKVHECSICGAEFSSGQALGGHMRRHRNLVNTSTTTTTTTTSM 238
Query: 133 XXXXXXXXANREKENRRVLFPDLNL---------------TPIENGLVFLKIGQATPLVD 177
++ K+ R DLNL P EN + F + LVD
Sbjct: 239 SLSIGSPKSHEAKKPRNGFKLDLNLPAPEVDQKDQSKFSFQPRENVIAF----SNSSLVD 294
Query: 178 C 178
C
Sbjct: 295 C 295
>Medtr4g057230.1 | C2H2-type zinc finger protein, putative | HC |
chr4:20926644-20925367 | 20130731
Length = 293
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 54/120 (45%), Gaps = 49/120 (40%)
Query: 46 VFECKTCNRKFQSFQALGGHRASHK----------------------------------- 70
++ECKTCNR F SFQALGGHRASHK
Sbjct: 112 IYECKTCNRTFPSFQALGGHRASHKKPKIMAEEKKPPSPPSQQPRPQSSSHDSQSDNLVA 171
Query: 71 ---------KPR-----LEDGGESNDHGSSPPKAKTHECSICGLEFSIGQALGGHMRRHK 116
KPR + G + KAK HECSICG EF+ GQALGGHMRRH+
Sbjct: 172 NSDEYEEAEKPRGPMVSFQMGNHGLKAAINGNKAKIHECSICGSEFTSGQALGGHMRRHR 231
>Medtr0160s0030.1 | C2H2-type zinc finger protein, putative | HC |
scaffold0160:20867-19377 | 20130731
Length = 361
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 47 FECKTCNRKFQSFQALGGHRASHKKPRLEDGGESNDHGSSPPKAKTHECSICGLEFSIGQ 106
++C+TCN+ F+S+QALGGHRASHKK + E + + K HEC +C F+ GQ
Sbjct: 240 YKCETCNKVFKSYQALGGHRASHKKIKPNITVEESSPEFEIVEKKVHECPVCFRVFNSGQ 299
Query: 107 ALGGHMRRH 115
ALGGH R H
Sbjct: 300 ALGGHKRTH 308
>Medtr4g027440.1 | Cys2/His2 zinc-finger transcription factor | HC |
chr4:9546941-9545698 | 20130731
Length = 378
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 12/81 (14%)
Query: 47 FECKTCNRKFQSFQALGGHRASHKKPR--LEDGGESN----------DHGSSPPKAKTHE 94
++C TCN+ F+S+QALGGHRASHKK + E GG+ + + + + K HE
Sbjct: 220 YKCDTCNKVFRSYQALGGHRASHKKNKQVAESGGDYSISQHHEKINIEKNINVSEKKIHE 279
Query: 95 CSICGLEFSIGQALGGHMRRH 115
C IC EF+ GQALGGH R H
Sbjct: 280 CPICFREFASGQALGGHRRTH 300
>Medtr4g028610.1 | Cys2/His2 zinc-finger transcription factor | HC |
chr4:9613625-9612168 | 20130731
Length = 485
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 53/114 (46%), Gaps = 39/114 (34%)
Query: 46 VFECKTCNRKFQSFQALGGHRASHKK------PRLEDGGESN------------------ 81
+FECK C + F S QALGGHRASHKK RL+ + +
Sbjct: 226 LFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDQNPDDSIVEDDVITQDEFFPSKPN 285
Query: 82 -----DHG----------SSPPKAKTHECSICGLEFSIGQALGGHMRRHKTPSN 120
DHG SS K+K HECSIC FS GQALGGH R H SN
Sbjct: 286 STLQYDHGTSNNPTLMASSSKRKSKVHECSICHRSFSSGQALGGHKRCHWITSN 339
>Medtr1g106730.1 | C2H2-type zinc finger protein | HC |
chr1:48248085-48249261 | 20130731
Length = 251
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 48 ECKTCNRKFQSFQALGGHRASHKKPRLEDGGESNDH--GSSPPKAKTHECSICGLEFSIG 105
+C CN+ F S+QALGGH+ASH+K E+ + + S +K HECSIC F G
Sbjct: 84 KCSVCNKAFPSYQALGGHKASHRKSSSENQSTTVNETISVSVSTSKMHECSICHKSFPTG 143
Query: 106 QALGGHMRRH 115
QALGGH R H
Sbjct: 144 QALGGHKRCH 153
>Medtr1g018420.1 | C2H2-type zinc finger protein | HC |
chr1:5294238-5295310 | 20130731
Length = 232
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 16/82 (19%)
Query: 47 FECKTCNRKFQSFQALGGHRASHKKPRLEDGGES-------------NDHGSSPPKAKTH 93
++C CN++F S+QALGGH+ASH+K + GG+ N +G ++H
Sbjct: 81 YKCSVCNKEFSSYQALGGHKASHRKNSVGGGGDDHPSTSSAATTSSANTNGGG---VRSH 137
Query: 94 ECSICGLEFSIGQALGGHMRRH 115
ECSIC F GQALGGH R H
Sbjct: 138 ECSICHRSFPTGQALGGHKRCH 159
>Medtr1g077730.1 | C2H2-type zinc finger protein | HC |
chr1:34713835-34714419 | 20130731
Length = 194
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 49/114 (42%), Gaps = 41/114 (35%)
Query: 46 VFECKTCNRKFQSFQALGGHRASHKKPRLED---------------------GGESNDHG 84
V+ CKTC + F SFQALGGHR HKKPR + G N +
Sbjct: 43 VYACKTCKKTFTSFQALGGHRKVHKKPRYDRQVQEFQFKTNNKSISLKLNSINGMGNIYA 102
Query: 85 --------------------SSPPKAKTHECSICGLEFSIGQALGGHMRRHKTP 118
++ K K + CSICG +F+ GQALGGHM H P
Sbjct: 103 SSSSSSNNTSTTTTTNNNSNTNNNKTKVYGCSICGSKFTSGQALGGHMTFHHAP 156
>Medtr3g102980.1 | C2H2-type zinc finger protein | HC |
chr3:47436584-47435455 | 20130731
Length = 236
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 48 ECKTCNRKFQSFQALGGHRASHKKPRLEDGGESNDHGSSPP----------KAKTHECSI 97
+C CN+ F S+QALGGH+ASH+K + + ++ K KTHECSI
Sbjct: 87 KCSVCNKAFSSYQALGGHKASHRKAVMSATTVEDQTTTTSSAVTTSSASNGKNKTHECSI 146
Query: 98 CGLEFSIGQALGGHMRRH 115
C F GQALGGH R H
Sbjct: 147 CHKSFPTGQALGGHKRCH 164
>Medtr1g077700.1 | C2H2 and C2HC zinc finger protein | LC |
chr1:34710163-34710723 | 20130731
Length = 186
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 49/92 (53%), Gaps = 21/92 (22%)
Query: 46 VFECKTCNRKFQSFQALGGHR-ASHKKPRLEDGGESNDHGSS------------------ 86
V+ CKTCN+ F S QALGGHR KKPR DG + N+ S
Sbjct: 59 VYACKTCNKTFTSSQALGGHRKGCQKKPR--DGFKINNKSISLKLNSINGMGNIYASSSS 116
Query: 87 PPKAKTHECSICGLEFSIGQALGGHMRRHKTP 118
K+K + CSICG +F+ GQALGGHM H P
Sbjct: 117 SNKSKVYGCSICGSKFTSGQALGGHMTFHHAP 148
>Medtr4g109340.1 | C2H2-type zinc finger protein | HC |
chr4:45405757-45403067 | 20130731
Length = 516
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 46/110 (41%), Gaps = 41/110 (37%)
Query: 47 FECKTCNRKFQSFQALGGHRASHKKPR--------------------------------- 73
FEC TCN+ F S+QALGGHRASHKK +
Sbjct: 348 FECTTCNKIFHSYQALGGHRASHKKNKGCFASKIESSENSIEFETDLSHHEPTTESKLMK 407
Query: 74 -------LEDGGESNDHGSSPPKAKT-HECSICGLEFSIGQALGGHMRRH 115
+++ GE S K K HEC IC F GQALGGH R H
Sbjct: 408 ISDNIEYVQNMGERETVRDSKKKIKGHHECPICFKVFQSGQALGGHKRSH 457
>Medtr3g023760.1 | C2H2-type zinc finger protein | HC |
chr3:7235345-7233398 | 20130731
Length = 468
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 25/27 (92%)
Query: 47 FECKTCNRKFQSFQALGGHRASHKKPR 73
FEC TCN+KFQS+QALGGHRASHK+ +
Sbjct: 351 FECATCNKKFQSYQALGGHRASHKRTK 377
>Medtr5g062300.1 | C2H2-type zinc finger protein | HC |
chr5:25869936-25870676 | 20130731
Length = 246
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 40/88 (45%), Gaps = 19/88 (21%)
Query: 47 FECKTCNRKFQSFQALGGHRASHKKPRLEDGGESNDHGSSPPKAK--------------- 91
F C CN+ F S QALGGHRASHK + + + P +
Sbjct: 119 FVCSCCNKVFGSHQALGGHRASHKNVKGCFAANTTHDDNHHPMTRGNVEGEEVNSNNNNN 178
Query: 92 ----THECSICGLEFSIGQALGGHMRRH 115
H+CSIC FS GQALGGH R H
Sbjct: 179 DCIIGHKCSICLRVFSTGQALGGHKRCH 206
>Medtr4g073310.1 | C2H2-type zinc-finger protein | LC |
chr4:27732575-27731779 | 20130731
Length = 227
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 45 RVFECKTCNRKFQSFQALGGHRASHKKPRLEDGGESNDHGSSPPKAKTHECSICGLEFSI 104
R++EC+ C ++F S ALGGH+ SH++ L+ + +D + + H C +C FS
Sbjct: 31 RMYECELCGKRFNSGNALGGHKTSHRRSHLQRHDKYDD------EKQKHRCPVCNKVFSS 84
Query: 105 GQALGGHMRRHKTPSNK 121
+A GHM H +K
Sbjct: 85 NKAFCGHMILHHEKGSK 101
>Medtr1g052185.1 | C2H2 and C2HC zinc finger protein | LC |
chr1:21073526-21074362 | 20130731
Length = 278
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 46 VFECKTCNRKFQSFQALGGHRASHKKPRLEDGGESNDHG----SSPPKAKTHECSICGLE 101
++EC+ C ++F S ALGGH+ SH + + ++ + ++H + + H C +C
Sbjct: 32 IYECELCGKRFNSGAALGGHKTSH-RSQPQNKKQRHNHAVNKDDKDDEKQKHCCRVCNKV 90
Query: 102 FSIGQALGGHMRRHK 116
FS QAL GHMR HK
Sbjct: 91 FSSKQALCGHMRCHK 105
>Medtr5g076290.1 | two zinc finger transport-like protein, putative
| LC | chr5:32504176-32504521 | 20130731
Length = 56
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/26 (76%), Positives = 24/26 (92%)
Query: 91 KTHECSICGLEFSIGQALGGHMRRHK 116
KT ECSICGLEF+IGQAL G+MRR++
Sbjct: 4 KTLECSICGLEFAIGQALSGYMRRYR 29