Miyakogusa Predicted Gene

Lj5g3v2261780.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2261780.2 tr|Q05AP3|Q05AP3_DANRE Zgc:152777 OS=Danio rerio
GN=nsrp1 PE=2 SV=1,40.44,1e-18,DUF2040,Domain of unknown function
DUF2040; seg,NULL; coiled-coil,NULL; INNER MEMBRANE
PROTEIN,NULL,CUFF.57118.2
         (318 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g095010.1 | nuclear speckle splicing regulatory protein, p...   409   e-114

>Medtr5g095010.1 | nuclear speckle splicing regulatory protein,
           putative | HC | chr5:41533898-41538027 | 20130731
          Length = 313

 Score =  409 bits (1052), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/318 (66%), Positives = 252/318 (79%), Gaps = 5/318 (1%)

Query: 1   MSKYGLNXXXXXXXXXXXXXXXXTPFGFNDDDEDDVEREIALQAAKKKSLKEVEEQQKKA 60
           M+KYGLN                   GFN+DD++DVE+EIA+QA+K KSLKEVEEQQ+KA
Sbjct: 1   MNKYGLNLRPAKPKKQPPRPS--IALGFNEDDDNDVEKEIAIQASKSKSLKEVEEQQRKA 58

Query: 61  LEEDPSVFDYDGVYEKMKEKVAKPLIQDREERKPKYIQNLMKKAKEREQYREIVYEKKVA 120
           LEEDP++FDYDGVY+KMKEKVA+PLIQDREERKPKYIQNL++KAKEREQYREIVYEKK+A
Sbjct: 59  LEEDPTIFDYDGVYDKMKEKVARPLIQDREERKPKYIQNLIQKAKEREQYREIVYEKKIA 118

Query: 121 KERDKDDHLYADKDKFVTEAYRRKLAXXXXXXXXXXXXXXXXXXDDVTKKKDFLLDFYSN 180
           KER KDDHL+ADKDK+VTEAYRRKLA                  +DVTKKKDFLLDFY+N
Sbjct: 119 KERSKDDHLFADKDKYVTEAYRRKLAEREKQMELERIRELQEEREDVTKKKDFLLDFYTN 178

Query: 181 LDRNVAYGAKDAQGRKRDNQAEHRVPETHEGVNPDASDRHQEHGDASDERQHSLGNSSPP 240
           LD+NVA+GAKDAQGRKRDN+AE+RV E  EG++PDAS++HQ+    +DE QHSL  +S P
Sbjct: 179 LDKNVAFGAKDAQGRKRDNRAENRVLEKREGMSPDASNQHQDGN--TDEEQHSLAKTSSP 236

Query: 241 VEFSKEKIGDQGEPSNPSNRSISPTDMKPNPEALVEEENKPVEQPSASQPKADHHKRNQD 300
            E   +KIGDQGE SN SN S SP  M+PNP+A  EE++ PVEQP ASQP  +HHKR+QD
Sbjct: 237 EESPGKKIGDQGETSNLSNISASPLAMRPNPDASAEEKS-PVEQPPASQPNPEHHKRSQD 295

Query: 301 AVAAAKERFLARKKAKEQ 318
           AVAAAKERFLARK+AK+Q
Sbjct: 296 AVAAAKERFLARKRAKQQ 313