Miyakogusa Predicted Gene

Lj5g3v2259640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2259640.1 tr|Q0TPS1|Q0TPS1_CLOP1 Riboflavin biosynthesis
protein RibF OS=Clostridium perfringens (strain ATCC
,31.22,0.0000000000001,PROTEIN-S ISOPRENYLCYSTEINE
O-METHYLTRANSFERASE,NULL; FAD_syn,FAD synthetase; seg,NULL; no
descripti,CUFF.57107.1
         (374 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g114560.1 | riboflavin kinase | HC | chr1:51720720-5172399...   546   e-156

>Medtr1g114560.1 | riboflavin kinase | HC | chr1:51720720-51723995 |
           20130731
          Length = 404

 Score =  546 bits (1408), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/372 (75%), Positives = 308/372 (82%), Gaps = 9/372 (2%)

Query: 6   VSRISHHFRECDLGCFR--FTLQTLHHSFPRPLKPRWXXXXXXXXXXXKPPNRLPLSHCF 63
           V+RISHHFR+C+L  F   F   + H SFPR LKP                NR   + C+
Sbjct: 39  VNRISHHFRDCELLHFGVGFRFHSFHLSFPRSLKP------CLPGNAISVTNRSNENKCY 92

Query: 64  SATPSKSPGEFPLLFDC-FSQQEEEREIMSDGKSAVAGGIVALGKFDALHIGHRELAIQA 122
           S+  S   GE PLLFD  FSQQE++REI+SDG SAVAGGIVALGKFDALHIGHRELAIQA
Sbjct: 93  SSKYSGGAGEIPLLFDSSFSQQEDDREIISDGISAVAGGIVALGKFDALHIGHRELAIQA 152

Query: 123 SKAGQPFLLSFAGMAKVLGWENRAPIVAKSDRKRVLSSWAPYCGNMVPEEFQIEFSSVRH 182
           S+AG PFLLSF GMAKV GWE+RAPIVAK DRKRVLSSW PYCGNMVPEEF+IEFSSVRH
Sbjct: 153 SRAGPPFLLSFVGMAKVFGWEHRAPIVAKCDRKRVLSSWFPYCGNMVPEEFEIEFSSVRH 212

Query: 183 LSPRQFVEKLSRELRVRGVVAGENYRFGYKAAGDALELVKLCEEFGMEAYIIKSVMDKNL 242
           LSPRQFVEKL++ELRVRGVVAGENYRFGYKAAGDA EL KLCEE+ MEAYIIKSVMDKN 
Sbjct: 213 LSPRQFVEKLAKELRVRGVVAGENYRFGYKAAGDASELQKLCEEYEMEAYIIKSVMDKNQ 272

Query: 243 SSANLDFSTSSKERGQVSSTRVREALAVGDMRYVSELLGRQHRLILMATDQERFSVGQGK 302
            S N++ S  SKERGQVSSTRVREALAVGDMRYVSELLGRQHRL+LMATD+E FS  Q K
Sbjct: 273 YSTNINSSIGSKERGQVSSTRVREALAVGDMRYVSELLGRQHRLVLMATDRETFSFSQYK 332

Query: 303 VSAPRSCLLNLAPKEGLYEKCSLFLGQEHVVQCRLVIDNKFVYIETDQGGLSDIFGTQNL 362
           VSAP+SCLLNLAPKEGLYEKCSL LGQE+V+ CR++ID+KFV+IETD GG SDIFGT +L
Sbjct: 333 VSAPKSCLLNLAPKEGLYEKCSLLLGQENVMLCRVIIDSKFVHIETDYGGSSDIFGTHDL 392

Query: 363 QFLHIEFGDSST 374
           Q+L IEFGDSST
Sbjct: 393 QYLLIEFGDSST 404