Miyakogusa Predicted Gene

Lj5g3v2258600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2258600.1 tr|J3SCX5|J3SCX5_CROAD Prefoldin subunit 5-like
OS=Crotalus adamanteus PE=2 SV=1,34.75,2e-19,SUBFAMILY NOT NAMED,NULL;
PREFOLDIN SUBUNIT 5,NULL; coiled-coil,NULL; seg,NULL;
Prefoldin,Prefoldin ,CUFF.57102.1
         (156 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g114500.1 | prefoldin subunit 5 | HC | chr1:51677448-51679...   244   3e-65
Medtr1g114500.2 | prefoldin subunit 5 | HC | chr1:51677456-51678...   200   5e-52

>Medtr1g114500.1 | prefoldin subunit 5 | HC | chr1:51677448-51679122
           | 20130731
          Length = 152

 Score =  244 bits (623), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 118/140 (84%), Positives = 130/140 (92%)

Query: 17  LERMSVEQLKAVKEQADLEVNLLQDSLSNIRTATTRLEIASSALNDLALRPRASKMLVPL 76
           LERMSVEQLKAVKEQAD+EVNLLQDSL+NI TATTRLE+A++ALNDL+LR   SK+LVPL
Sbjct: 13  LERMSVEQLKAVKEQADMEVNLLQDSLNNIGTATTRLELATTALNDLSLRSLGSKILVPL 72

Query: 77  TASLYVPGTLDDSQHLLVDVGTGYFIEKTMDEGKDYCERKINLLKSNFDQLVEVASKKKN 136
           TASLYVP TL D  H+LVD+GTGYF+EKTM EGKDYCERKINLLKSNFDQLVEVASKKKN
Sbjct: 73  TASLYVPATLQDPHHVLVDIGTGYFVEKTMPEGKDYCERKINLLKSNFDQLVEVASKKKN 132

Query: 137 VADEVGMLLQAKLKQLASSS 156
           VADE G++LQAKLKQLASSS
Sbjct: 133 VADEAGVILQAKLKQLASSS 152


>Medtr1g114500.2 | prefoldin subunit 5 | HC | chr1:51677456-51678895
           | 20130731
          Length = 135

 Score =  200 bits (508), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 95/116 (81%), Positives = 105/116 (90%)

Query: 17  LERMSVEQLKAVKEQADLEVNLLQDSLSNIRTATTRLEIASSALNDLALRPRASKMLVPL 76
           LERMSVEQLKAVKEQAD+EVNLLQDSL+NI TATTRLE+A++ALNDL+LR   SK+LVPL
Sbjct: 13  LERMSVEQLKAVKEQADMEVNLLQDSLNNIGTATTRLELATTALNDLSLRSLGSKILVPL 72

Query: 77  TASLYVPGTLDDSQHLLVDVGTGYFIEKTMDEGKDYCERKINLLKSNFDQLVEVAS 132
           TASLYVP TL D  H+LVD+GTGYF+EKTM EGKDYCERKINLLKSNFDQLVE  S
Sbjct: 73  TASLYVPATLQDPHHVLVDIGTGYFVEKTMPEGKDYCERKINLLKSNFDQLVEETS 128