Miyakogusa Predicted Gene

Lj5g3v2256190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2256190.1 Non Characterized Hit- tr|A9P1I6|A9P1I6_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,61.11,0.00000000001,ZF_DNL,Zinc finger, DNL-type;
UNCHARACTERIZED,NULL; UNCHARACTERIZED,Mitochondrial import protein
TIM,CUFF.57073.1
         (284 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g112990.1 | DNL zinc finger protein | HC | chr1:51262959-5...   273   1e-73
Medtr4g045783.1 | DNL zinc finger protein | HC | chr4:15659392-1...    74   2e-13
Medtr4g045783.2 | DNL zinc finger protein | HC | chr4:15659392-1...    49   5e-06

>Medtr1g112990.1 | DNL zinc finger protein | HC |
           chr1:51262959-51260254 | 20130731
          Length = 231

 Score =  273 bits (699), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 139/193 (72%), Positives = 151/193 (78%), Gaps = 18/193 (9%)

Query: 76  HFRL-ASKRDDGQDSDTQFNSKGINTXXXXXXXXXXXXXXXXXXXLPILSDRRCFSLSPL 134
           HFRL +SKRDDG ++D++  SK  N                    L  +   RCFS+SPL
Sbjct: 42  HFRLPSSKRDDG-NNDSESQSKSSN---------------QINFNLSPVPTNRCFSISPL 85

Query: 135 SKDAAMGLVLSAAMGRGWTTGSGMEGPSAPAAGRDNESGTGNISTFPWSLFTKSPRRRML 194
           S DAAMGLVLSAA GRGWTTGSGMEGP  PA G+D +SGT NISTFPWSLFTKSPRRRML
Sbjct: 86  SNDAAMGLVLSAATGRGWTTGSGMEGPPVPAVGKDGQSGTENISTFPWSLFTKSPRRRML 145

Query: 195 VAFTCTICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDHLNLFQETNCYLNSSFNYK 254
           +AFTCTICGQRTTRAINPHAYTDGTVFVQCC CNAYHKLVDHLNLFQETNCYLNSSF YK
Sbjct: 146 IAFTCTICGQRTTRAINPHAYTDGTVFVQCCECNAYHKLVDHLNLFQETNCYLNSSFKYK 205

Query: 255 GPVWNDELKLRYM 267
           GP W D+LKLR+M
Sbjct: 206 GPGW-DDLKLRFM 217


>Medtr4g045783.1 | DNL zinc finger protein | HC |
           chr4:15659392-15665943 | 20130731
          Length = 158

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 38/54 (70%)

Query: 189 PRRRMLVAFTCTICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDHLNLFQE 242
           PRR +LV FTC +CG+RT R +N  AY  G VFVQC GC  +HKLVD+L L  E
Sbjct: 89  PRRSLLVQFTCDLCGERTERLVNRLAYERGAVFVQCAGCQRHHKLVDNLGLITE 142


>Medtr4g045783.2 | DNL zinc finger protein | HC |
           chr4:15659392-15665866 | 20130731
          Length = 130

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 189 PRRRMLVAFTCTICGQRTTRAINPHAYTDGTVFVQ 223
           PRR +LV FTC +CG+RT R +N  AY  G VFVQ
Sbjct: 89  PRRSLLVQFTCDLCGERTERLVNRLAYERGAVFVQ 123