Miyakogusa Predicted Gene

Lj5g3v2256170.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2256170.2 tr|G7ZYS2|G7ZYS2_MEDTR Coatomer subunit delta
OS=Medicago truncatula GN=MTR_077s0036 PE=4
SV=1,92.53,0,Adap_comp_sub,Clathrin adaptor, mu subunit, C-terminal;
COATOMER SUBUNIT DELTA,NULL; MHD,Clathrin ad,CUFF.57076.2
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g101180.3 | coatomer subunit delta-like protein | HC | chr...   343   4e-95
Medtr2g101180.2 | coatomer subunit delta-like protein | HC | chr...   343   4e-95
Medtr2g101180.1 | coatomer subunit delta-like protein | HC | chr...   343   4e-95
Medtr1g111910.1 | coatomer subunit delta-like protein | HC | chr...   336   7e-93
Medtr1g111910.2 | coatomer subunit delta-like protein | HC | chr...   248   2e-66
Medtr1g111900.1 | coatomer subunit delta-like protein | HC | chr...   245   1e-65

>Medtr2g101180.3 | coatomer subunit delta-like protein | HC |
           chr2:43502531-43497041 | 20130731
          Length = 531

 Score =  343 bits (881), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 161/175 (92%), Positives = 170/175 (97%)

Query: 1   MNKELFANENKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN 60
           MNKELFANE  LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN
Sbjct: 348 MNKELFANEYILGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN 407

Query: 61  ETYVSIEYEASSMFDLRNVVISVPLPALRDAPSVSQIDGEWRYDSRNSILEWSVILIDNS 120
           ETYV+IEYEASSMFDLRNVVISVPLPALR+APSVSQIDGEWRYDSRNSILEWSV+LIDNS
Sbjct: 408 ETYVNIEYEASSMFDLRNVVISVPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNS 467

Query: 121 NRSGSMEFVVPQADSSAFFPISVRFMATDTFSELKVTNILPQKGGNPPKFSQRTQ 175
           NRSGS+EFVVPQ D+SAFFPISVRFMATDTFS+LKV NI+P KGGNPPK++QRTQ
Sbjct: 468 NRSGSLEFVVPQVDASAFFPISVRFMATDTFSDLKVMNIIPVKGGNPPKYAQRTQ 522


>Medtr2g101180.2 | coatomer subunit delta-like protein | HC |
           chr2:43502312-43497078 | 20130731
          Length = 531

 Score =  343 bits (881), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 161/175 (92%), Positives = 170/175 (97%)

Query: 1   MNKELFANENKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN 60
           MNKELFANE  LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN
Sbjct: 348 MNKELFANEYILGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN 407

Query: 61  ETYVSIEYEASSMFDLRNVVISVPLPALRDAPSVSQIDGEWRYDSRNSILEWSVILIDNS 120
           ETYV+IEYEASSMFDLRNVVISVPLPALR+APSVSQIDGEWRYDSRNSILEWSV+LIDNS
Sbjct: 408 ETYVNIEYEASSMFDLRNVVISVPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNS 467

Query: 121 NRSGSMEFVVPQADSSAFFPISVRFMATDTFSELKVTNILPQKGGNPPKFSQRTQ 175
           NRSGS+EFVVPQ D+SAFFPISVRFMATDTFS+LKV NI+P KGGNPPK++QRTQ
Sbjct: 468 NRSGSLEFVVPQVDASAFFPISVRFMATDTFSDLKVMNIIPVKGGNPPKYAQRTQ 522


>Medtr2g101180.1 | coatomer subunit delta-like protein | HC |
           chr2:43502531-43497038 | 20130731
          Length = 531

 Score =  343 bits (881), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 161/175 (92%), Positives = 170/175 (97%)

Query: 1   MNKELFANENKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN 60
           MNKELFANE  LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN
Sbjct: 348 MNKELFANEYILGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN 407

Query: 61  ETYVSIEYEASSMFDLRNVVISVPLPALRDAPSVSQIDGEWRYDSRNSILEWSVILIDNS 120
           ETYV+IEYEASSMFDLRNVVISVPLPALR+APSVSQIDGEWRYDSRNSILEWSV+LIDNS
Sbjct: 408 ETYVNIEYEASSMFDLRNVVISVPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNS 467

Query: 121 NRSGSMEFVVPQADSSAFFPISVRFMATDTFSELKVTNILPQKGGNPPKFSQRTQ 175
           NRSGS+EFVVPQ D+SAFFPISVRFMATDTFS+LKV NI+P KGGNPPK++QRTQ
Sbjct: 468 NRSGSLEFVVPQVDASAFFPISVRFMATDTFSDLKVMNIIPVKGGNPPKYAQRTQ 522


>Medtr1g111910.1 | coatomer subunit delta-like protein | HC |
           chr1:50612456-50609404 | 20130731
          Length = 394

 Score =  336 bits (862), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 160/175 (91%), Positives = 170/175 (97%), Gaps = 1/175 (0%)

Query: 1   MNKELFANENKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN 60
           MNKELFANEN LGLKDPNRPFPTGQASDAGGVGLL+WRMQSTDESMVPLTINCWPSSSGN
Sbjct: 212 MNKELFANENILGLKDPNRPFPTGQASDAGGVGLLRWRMQSTDESMVPLTINCWPSSSGN 271

Query: 61  ETYVSIEYEASSMFDLRNVVISVPLPALRDAPSVSQIDGEWRYDSRNSILEWSVILIDNS 120
           ETYV+IEYEASSMFDLRNVVISVP PALR+APSVSQIDGEWRYDSRNSILEWSV+LIDNS
Sbjct: 272 ETYVNIEYEASSMFDLRNVVISVPFPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNS 331

Query: 121 NRSGSMEFVVPQADSSAFFPISVRFMATDTFSELKVTNILPQKGGNPPKFSQRTQ 175
           NRSGS+EFVVPQA +S FFPISVRF+ATDTFS+LKVTNI+P KGGNPPKF+QRTQ
Sbjct: 332 NRSGSLEFVVPQA-ASTFFPISVRFIATDTFSDLKVTNIIPLKGGNPPKFAQRTQ 385


>Medtr1g111910.2 | coatomer subunit delta-like protein | HC |
           chr1:50612456-50609404 | 20130731
          Length = 350

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/122 (95%), Positives = 120/122 (98%)

Query: 1   MNKELFANENKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGN 60
           MNKELFANEN LGLKDPNRPFPTGQASDAGGVGLL+WRMQSTDESMVPLTINCWPSSSGN
Sbjct: 212 MNKELFANENILGLKDPNRPFPTGQASDAGGVGLLRWRMQSTDESMVPLTINCWPSSSGN 271

Query: 61  ETYVSIEYEASSMFDLRNVVISVPLPALRDAPSVSQIDGEWRYDSRNSILEWSVILIDNS 120
           ETYV+IEYEASSMFDLRNVVISVP PALR+APSVSQIDGEWRYDSRNSILEWSV+LIDNS
Sbjct: 272 ETYVNIEYEASSMFDLRNVVISVPFPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNS 331

Query: 121 NR 122
           NR
Sbjct: 332 NR 333


>Medtr1g111900.1 | coatomer subunit delta-like protein | HC |
           chr1:50606901-50602686 | 20130731
          Length = 398

 Score =  245 bits (626), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 125/174 (71%), Positives = 132/174 (75%), Gaps = 35/174 (20%)

Query: 2   NKELFANENKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNE 61
           NKELFANE  LGLKDP+RPFPTGQASDA GVGLLKWRM+STDESMVPLTINCW       
Sbjct: 251 NKELFANEYILGLKDPSRPFPTGQASDAAGVGLLKWRMKSTDESMVPLTINCW------- 303

Query: 62  TYVSIEYEASSMFDLRNVVISVPLPALRDAPSVSQIDGEWRYDSRNSILEWSVILIDNSN 121
                           NVVISVPLPALR+APSVSQIDGEWRYDSRNSIL+          
Sbjct: 304 ----------------NVVISVPLPALREAPSVSQIDGEWRYDSRNSILD---------- 337

Query: 122 RSGSMEFVVPQADSSAFFPISVRFMATDTFSELKVTNILPQKGGNPPKFSQRTQ 175
             GSMEFVVPQADSSAFFPISVRF  TDTFS+LKVTNI+P KGGNPPK +QRTQ
Sbjct: 338 --GSMEFVVPQADSSAFFPISVRFTTTDTFSDLKVTNIIPLKGGNPPKHAQRTQ 389