Miyakogusa Predicted Gene

Lj5g3v2256160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2256160.1 Non Characterized Hit- tr|B9S5I6|B9S5I6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,47.96,0.00000000000003,seg,NULL,CUFF.57070.1
         (138 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g112960.1 | hypothetical protein | HC | chr1:51230271-5123...    73   9e-14

>Medtr1g112960.1 | hypothetical protein | HC |
           chr1:51230271-51231125 | 20130731
          Length = 132

 Score = 72.8 bits (177), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/95 (53%), Positives = 57/95 (60%), Gaps = 11/95 (11%)

Query: 30  AAAPTAASYTSLRDIM---PHPN-NDSWNE-IPIKNHLLKQAALAYLQPMSTPPPE--VG 82
           A  PT  SYTSLRD+M   P  + N SWNE IPIKN LLKQAALAYLQPMS PP    V 
Sbjct: 13  AIVPTT-SYTSLRDMMISLPQSSLNGSWNENIPIKNPLLKQAALAYLQPMSIPPDHDFVN 71

Query: 83  NKGF-LQKLKENCVCFRWLHGGVFSTLGKFVGLFC 116
           NK F      ++  CF WL+ G    +  FVG  C
Sbjct: 72  NKCFSCCGGADSASCFEWLNCGTL--IRAFVGFIC 104