Miyakogusa Predicted Gene

Lj5g3v2246070.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2246070.2 Non Characterized Hit- tr|I1L655|I1L655_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,96.67,3.00018e-42,V-TYPE ATP SYNTHASE BETA CHAIN,NULL; ATP
SYNTHASE,NULL; ATP-synt_ab_N,ATPase, alpha/beta subunit,
N-,CUFF.57218.2
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g112870.3 | archaeal/vacuolar-type H+-ATPase subunit B | H...   169   4e-43
Medtr1g112870.2 | archaeal/vacuolar-type H+-ATPase subunit B | H...   169   4e-43
Medtr1g112870.1 | archaeal/vacuolar-type H+-ATPase subunit B | H...   169   4e-43
Medtr7g081010.1 | archaeal/vacuolar-type H+-ATPase subunit B | H...   164   2e-41

>Medtr1g112870.3 | archaeal/vacuolar-type H+-ATPase subunit B | HC
          | chr1:51173227-51179717 | 20130731
          Length = 489

 Score =  169 bits (429), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/91 (92%), Positives = 87/91 (95%)

Query: 1  MGVAQKIPDTEDGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQV 60
          MGVAQ   D +DGTLEIGMEYRTVSGVAGPLVIL+KVKGPK+QEIVNIRLGDGTTRRGQV
Sbjct: 1  MGVAQNASDNDDGTLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQV 60

Query: 61 LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91
          LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE
Sbjct: 61 LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91


>Medtr1g112870.2 | archaeal/vacuolar-type H+-ATPase subunit B | HC
          | chr1:51173227-51179762 | 20130731
          Length = 489

 Score =  169 bits (429), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/91 (92%), Positives = 87/91 (95%)

Query: 1  MGVAQKIPDTEDGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQV 60
          MGVAQ   D +DGTLEIGMEYRTVSGVAGPLVIL+KVKGPK+QEIVNIRLGDGTTRRGQV
Sbjct: 1  MGVAQNASDNDDGTLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQV 60

Query: 61 LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91
          LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE
Sbjct: 61 LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91


>Medtr1g112870.1 | archaeal/vacuolar-type H+-ATPase subunit B | HC
          | chr1:51173321-51179687 | 20130731
          Length = 489

 Score =  169 bits (429), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/91 (92%), Positives = 87/91 (95%)

Query: 1  MGVAQKIPDTEDGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQV 60
          MGVAQ   D +DGTLEIGMEYRTVSGVAGPLVIL+KVKGPK+QEIVNIRLGDGTTRRGQV
Sbjct: 1  MGVAQNASDNDDGTLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQV 60

Query: 61 LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91
          LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE
Sbjct: 61 LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91


>Medtr7g081010.1 | archaeal/vacuolar-type H+-ATPase subunit B | HC
          | chr7:30887619-30882053 | 20130731
          Length = 487

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/91 (92%), Positives = 86/91 (94%), Gaps = 1/91 (1%)

Query: 1  MGVAQKIPDTEDGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQV 60
          MGV Q   D EDGTLEIGMEYRTVSGVAGPLVIL+KVKGPK+QEIVNIRLGDGTTRRGQV
Sbjct: 1  MGVPQNAHD-EDGTLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQV 59

Query: 61 LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91
          LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE
Sbjct: 60 LEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 90