Miyakogusa Predicted Gene

Lj5g3v2245940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2245940.1 Non Characterized Hit- tr|A0ZMC6|A0ZMC6_NODSP
Putative uncharacterized protein OS=Nodularia
spumigen,31.86,2e-18,DUF3353,Protein of unknown function DUF3353;
seg,NULL,CUFF.57067.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g112860.1 | transmembrane protein, putative | HC | chr1:51...   377   e-105
Medtr1g112860.2 | transmembrane protein, putative | HC | chr1:51...   357   5e-99

>Medtr1g112860.1 | transmembrane protein, putative | HC |
           chr1:51161062-51157644 | 20130731
          Length = 287

 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/289 (71%), Positives = 222/289 (76%), Gaps = 7/289 (2%)

Query: 3   ATLSVRPDRLSAGSSFXXXXXXXXXXXXXGKPAVIEPWRGAPLQTHCRRAFTRIVPPVQA 62
           AT+ VR DR+SAGSSF              KP + EPW   PL+   R A TR V PVQA
Sbjct: 6   ATIPVRSDRISAGSSFPRPPPVRSLV----KPILTEPW---PLRKRWRHASTRSVGPVQA 58

Query: 63  ASRADDSAPFEMSVENALKLLGVSEGASFDDILRAKNAILANCKDDXXXXXXXXXXYDML 122
           +SRADDSAPFEMSVENALKLLGVSEGASFDDILRAKN+I+A+CKDD          YDML
Sbjct: 59  SSRADDSAPFEMSVENALKLLGVSEGASFDDILRAKNSIVASCKDDQETISQVEAAYDML 118

Query: 123 LMQSLTQRRAGKVVNSSVRYADVKRVKPAATGSMPPWLKSTMXXXXXXXXXXXXGDLGLQ 182
           LMQ LTQRRAGKVV+SSVRYADVKRV+  A  SMP W++STM             DLGLQ
Sbjct: 119 LMQRLTQRRAGKVVSSSVRYADVKRVQSQANSSMPQWMQSTMKKAPVSIESPSTRDLGLQ 178

Query: 183 AGVYGALMGLTYFSGVSPPSSAYGGADVPGLILAGSFGASLYFMTKKNVKLGKAVGITIG 242
           AGVYGALMGLTYFSG S P + Y GADVPGLILAGSFGASLYFMTKKNVKLGKAV ITIG
Sbjct: 179 AGVYGALMGLTYFSGSSSPPAGYAGADVPGLILAGSFGASLYFMTKKNVKLGKAVVITIG 238

Query: 243 GLIVGAVVGSAVENWLQVDIVPFLGIHSPAAVVGEIIIISQFLVSLYLR 291
           GL+ GAVVGS VENWLQVDIVPFLGI SPAAVV E+IIISQFLVSLYLR
Sbjct: 239 GLVAGAVVGSVVENWLQVDIVPFLGIRSPAAVVSEVIIISQFLVSLYLR 287


>Medtr1g112860.2 | transmembrane protein, putative | HC |
           chr1:51161013-51157803 | 20130731
          Length = 276

 Score =  357 bits (917), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 201/289 (69%), Positives = 217/289 (75%), Gaps = 18/289 (6%)

Query: 3   ATLSVRPDRLSAGSSFXXXXXXXXXXXXXGKPAVIEPWRGAPLQTHCRRAFTRIVPPVQA 62
           AT+ VR DR+SAGSSF              KP + EPW   PL+   R A TR V PVQA
Sbjct: 6   ATIPVRSDRISAGSSFPRPPPVRSLV----KPILTEPW---PLRKRWRHASTRSVGPVQA 58

Query: 63  ASRADDSAPFEMSVENALKLLGVSEGASFDDILRAKNAILANCKDDXXXXXXXXXXYDML 122
           +SRADDSAPFEMSVENALKLLGVSEGASFDDILRAKN+I+A+CKDD              
Sbjct: 59  SSRADDSAPFEMSVENALKLLGVSEGASFDDILRAKNSIVASCKDDQET----------- 107

Query: 123 LMQSLTQRRAGKVVNSSVRYADVKRVKPAATGSMPPWLKSTMXXXXXXXXXXXXGDLGLQ 182
           + Q LTQRRAGKVV+SSVRYADVKRV+  A  SMP W++STM             DLGLQ
Sbjct: 108 ISQRLTQRRAGKVVSSSVRYADVKRVQSQANSSMPQWMQSTMKKAPVSIESPSTRDLGLQ 167

Query: 183 AGVYGALMGLTYFSGVSPPSSAYGGADVPGLILAGSFGASLYFMTKKNVKLGKAVGITIG 242
           AGVYGALMGLTYFSG S P + Y GADVPGLILAGSFGASLYFMTKKNVKLGKAV ITIG
Sbjct: 168 AGVYGALMGLTYFSGSSSPPAGYAGADVPGLILAGSFGASLYFMTKKNVKLGKAVVITIG 227

Query: 243 GLIVGAVVGSAVENWLQVDIVPFLGIHSPAAVVGEIIIISQFLVSLYLR 291
           GL+ GAVVGS VENWLQVDIVPFLGI SPAAVV E+IIISQFLVSLYLR
Sbjct: 228 GLVAGAVVGSVVENWLQVDIVPFLGIRSPAAVVSEVIIISQFLVSLYLR 276