Miyakogusa Predicted Gene

Lj5g3v2242490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2242490.1 Non Characterized Hit- tr|A5AN67|A5AN67_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,45.45,0.00000002,B3,B3 DNA binding domain; no
description,DNA-binding pseudobarrel domain; B3 DNA binding domain,B3
D,CUFF.57029.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g108780.1 | transcriptional factor B3 family protein | HC ...    63   2e-10
Medtr1g035570.1 | B3 DNA-binding domain protein | LC | chr1:1295...    62   2e-10
Medtr1g035490.1 | B3 DNA-binding domain protein | LC | chr1:1288...    60   1e-09
Medtr8g103940.1 | transcriptional factor B3 family protein | LC ...    59   2e-09
Medtr3g061340.1 | transcriptional factor B3 family protein | LC ...    58   4e-09
Medtr3g061300.1 | B3 DNA-binding domain protein | LC | chr3:2434...    57   8e-09
Medtr1g035520.1 | B3 DNA-binding domain protein | LC | chr1:1290...    56   2e-08
Medtr3g061370.1 | plant-specific B3-DNA-binding domain protein |...    55   3e-08
Medtr3g061310.1 | transcriptional factor B3 family protein | LC ...    55   3e-08
Medtr1g035620.1 | B3 DNA-binding domain protein | LC | chr1:1297...    53   1e-07
Medtr3g061320.1 | plant-specific B3-DNA-binding domain protein |...    52   2e-07
Medtr3g005490.1 | B3 DNA-binding domain protein | LC | chr3:2236...    50   7e-07
Medtr6g061070.1 | B3 DNA-binding domain protein | LC | chr6:2111...    50   1e-06
Medtr3g005420.2 | B3 DNA-binding domain protein | LC | chr3:1992...    50   1e-06
Medtr3g005420.1 | B3 DNA-binding domain protein | LC | chr3:1995...    49   2e-06
Medtr3g061350.1 | plant-specific B3-DNA-binding domain protein |...    49   2e-06

>Medtr1g108780.1 | transcriptional factor B3 family protein | HC |
           chr1:49164002-49166141 | 20130731
          Length = 461

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 46/193 (23%)

Query: 1   MNNSAEVSYRVKIFRA--TKASSPHHVEGAERGKQTSPGNNFAERGSERIAKKSSITNVL 58
           M NS   +++V IFR    + S P  V G         G N+ E       K  +I +  
Sbjct: 276 MINSKSYAFKVLIFRVDEEQHSLPPQVHGD--------GVNWLETAGITEVKSKTIMS-- 325

Query: 59  DNDYDGSENNSR----------------RLENQFTITLKNTDRSIPM------------- 89
              Y G++   R                +  NQFT TL+  + +I +             
Sbjct: 326 ---YKGTKETQRNSLQARPCSFKNSEAKKEANQFTSTLEKPNFTINLRSSHWDVYRPRVR 382

Query: 90  -GFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDTCV 148
             F +KY+  +   A+LQ + K W VQL Y   + + + L  GWS FV + +L+ GD CV
Sbjct: 383 NSFSSKYLGPKKKTAMLQFEEKLWPVQLMYYPSEPATK-LGEGWSLFVEENKLQAGDVCV 441

Query: 149 FELVDKEKFVLKV 161
           F L +KE  VL V
Sbjct: 442 FVLANKEDVVLDV 454



 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 10/123 (8%)

Query: 41  AERGSERIAKKSSITNVLDNDYDGSENNSRRLENQFTITLKNTDRSIPMGFINKYVTARV 100
            + G E+    + I   L N     E+N+       T +  N    +P+ F  KY+  + 
Sbjct: 172 VKHGQEQRNSTAKIVEAL-NKAKNYESNNPFFTAIMTYSYVNQYMHVPLNFEQKYLKEQQ 230

Query: 101 TYAILQAKNKE--WHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFV 158
           +   LQ  + E  W V+ C        R +S+GW  FV D  L+ GD C+FE+++ + + 
Sbjct: 231 SEIALQVLDDERTWIVKYC-------LRKMSNGWKTFVSDNNLKLGDVCLFEMINSKSYA 283

Query: 159 LKV 161
            KV
Sbjct: 284 FKV 286


>Medtr1g035570.1 | B3 DNA-binding domain protein | LC |
           chr1:12954107-12956283 | 20130731
          Length = 406

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 76  FTITLKNTDRSIPMGFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARFLSSGWSKF 135
           F + +KNT  S+P  F+ +     +    L+   K W V++ Y       RF S GW KF
Sbjct: 309 FKVLVKNTAPSVPKEFMKRGCHENIVE--LKMGRKSWFVKVNYYESICGCRF-SKGWRKF 365

Query: 136 VRDCELEEGDTCVFELVDKEKFVLKVS 162
           +++C++E GDTC+ +L+D+ KFV  VS
Sbjct: 366 MKECKVEIGDTCLLKLIDERKFVFDVS 392


>Medtr1g035490.1 | B3 DNA-binding domain protein | LC |
           chr1:12887655-12885322 | 20130731
          Length = 332

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 15/118 (12%)

Query: 57  VLDNDYDGSENNSRRLEN------------QFTITLKNTDRSIPMGFINKYVTARVTYAI 104
           V   D +G+ + SR  EN               + +KN   S+P  F+ K     +    
Sbjct: 212 VKQKDIEGTSSGSRPKENFLDEGRDVMKHNTLKVLVKNKAPSVPKEFMKKGSNENIVE-- 269

Query: 105 LQAKNKEWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFVLKVS 162
           L+   K W V++ Y       RF + GW KF+ +C++E GDTC+F L+D+ KFV  VS
Sbjct: 270 LKMGRKSWFVKVNYYESVHGWRF-NKGWRKFMEECKVEIGDTCLFNLIDERKFVFDVS 326


>Medtr8g103940.1 | transcriptional factor B3 family protein | LC |
           chr8:43749832-43752569 | 20130731
          Length = 498

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 16/104 (15%)

Query: 70  RRLENQFTITLKNTDRSIPM--------------GFINKYVTARVTYAILQAKNKEWHVQ 115
           ++  +QF  TLKN   +I +               F  KY+  +     LQ     WHV+
Sbjct: 388 KKESDQFASTLKNPHFTIKVISSHADVYKPRIHNSFSEKYLCHK-KIVTLQFNKNLWHVR 446

Query: 116 LCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFVL 159
           L     + S + LS+GWSKFV + +LE GD CVFELV+KE  V 
Sbjct: 447 LASCPSEPSTK-LSTGWSKFVEENKLEAGDVCVFELVNKEDLVF 489


>Medtr3g061340.1 | transcriptional factor B3 family protein | LC |
           chr3:24361666-24362971 | 20130731
          Length = 274

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%)

Query: 102 YAILQAKNKEWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFVLKV 161
           Y +LQ   + W+V+L    E  + R LS+GWS F  +  L+ GD CVFEL +K+  V K+
Sbjct: 212 YVVLQIGKRSWNVKLLRYYEAKNGRHLSAGWSLFASESGLQSGDVCVFELTNKQDLVFKI 271


>Medtr3g061300.1 | B3 DNA-binding domain protein | LC |
           chr3:24346545-24347031 | 20130731
          Length = 127

 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 76  FTITLKNT---DRSIPMGFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARFLSSGW 132
           FTI +  T   +  + +  +N  +  +  Y +LQ   + W+++L    E  + R LS+GW
Sbjct: 32  FTILINPTHLAENRVCVPTLNGVIENKEKYVMLQIGKRSWNLKLLPYCEARNVRRLSAGW 91

Query: 133 SKFVRDCELEEGDTCVFELVDKEKFVLKV 161
           S F R+  L+ GD CVFEL++K+  V  +
Sbjct: 92  SLFARESGLQAGDVCVFELINKKDLVFNI 120


>Medtr1g035520.1 | B3 DNA-binding domain protein | LC |
           chr1:12907666-12912246 | 20130731
          Length = 383

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 24/167 (14%)

Query: 16  ATKASSPHHVEGAERGKQTSPGNNFAERGSER--IAKKSSITNVLDNDYDGS-------- 65
           AT A++P   +G+    + +  N   ++ SE   + +KS  T V D +Y G+        
Sbjct: 219 ATTATTP---QGSNIHMRKTNINASQQKVSENQGVQEKSETTPVKDMEYAGNFGDGISKS 275

Query: 66  --------ENNSRRLENQFTITLKNTDRSI--PMGFINKYVTARVTYAILQAKNKEWHVQ 115
                   ++ S  L   F + + ++D+ +  P   + K+         L+     W V 
Sbjct: 276 CTKTYGFRDSVSLNLHEMFKVFITSSDKLVVLPSELLKKHGIFSGNSVELRVGEGTWFVD 335

Query: 116 LCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFVLKVS 162
           + Y+       F + GW +FVRDC+++ GDTC+FE +D +  V KVS
Sbjct: 336 VSYNEHLDHGWF-TKGWQEFVRDCKVKTGDTCLFETIDVQNHVFKVS 381


>Medtr3g061370.1 | plant-specific B3-DNA-binding domain protein | HC
           | chr3:24369308-24370598 | 20130731
          Length = 281

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 7/91 (7%)

Query: 76  FTITLKNTD-----RSIPMGFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARFLSS 130
           FTI +K  +     RS+P   +   +  + T  +L    + W+V+L    E  + R LS+
Sbjct: 190 FTILIKPINLVEHTRSVPD--LKGVIENKDTNVMLLIGKRSWNVKLLRSYEGKNGRRLSA 247

Query: 131 GWSKFVRDCELEEGDTCVFELVDKEKFVLKV 161
           GW  F R+  L+ GD CVFEL++K+  V K+
Sbjct: 248 GWYLFARESGLKSGDVCVFELINKKDLVFKI 278


>Medtr3g061310.1 | transcriptional factor B3 family protein | LC |
           chr3:24351032-24352721 | 20130731
          Length = 285

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 104 ILQAKNKEWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFVLKV 161
           +LQ   + W V+L    E  + R LS+GWS FV +  L+  + CVFEL++KE  V KV
Sbjct: 225 VLQIGERSWKVKLLASYERETGRRLSAGWSLFVNESGLQPENVCVFELINKENLVFKV 282


>Medtr1g035620.1 | B3 DNA-binding domain protein | LC |
           chr1:12978462-12976237 | 20130731
          Length = 414

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 74  NQFTITLKNTDRSIPMGFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARFLSSGWS 133
           N   I + +T   I   F  ++      +       K W V++ Y   + + RF + GW 
Sbjct: 322 NTIEIRVNSTYPYIQHEFFKRHKECHGKFVQFTNGGKSWPVKVQY--YERTCRFYA-GWR 378

Query: 134 KFVRDCELEEGDTCVFELVDKEKFVLKVS 162
           KF  DCEL+ GDTC  +L+D +KFV KVS
Sbjct: 379 KFKEDCELKIGDTCKLKLIDDKKFVFKVS 407


>Medtr3g061320.1 | plant-specific B3-DNA-binding domain protein | LC
           | chr3:24354366-24356126 | 20130731
          Length = 279

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 36/59 (61%)

Query: 103 AILQAKNKEWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFVLKV 161
            +LQ   + W+V+L    +    R LS+ WS F R+  L++G+ CVFEL++KE  V KV
Sbjct: 218 VMLQIGKRSWNVKLLCWYKHTQGRRLSARWSLFARESGLQQGNVCVFELINKEGLVFKV 276


>Medtr3g005490.1 | B3 DNA-binding domain protein | LC |
           chr3:223656-221449 | 20130731
          Length = 265

 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 91  FINKYVTARVTYAILQAKNKEWHV-QLCYDREDGSARFLSSGWSKFVRDCELEEGDTCVF 149
           F +KY+   V   I  +  ++W V  + +D    SA  ++ G+S F RD  L  GD CVF
Sbjct: 184 FASKYLKPNVPIKIQTSHGEQWEVFGILHDANSSSAMKITRGFSIFQRDNNLSHGDYCVF 243

Query: 150 ELVDKEKFVLKVS 162
           EL+     VLKV+
Sbjct: 244 ELIKNNPLVLKVT 256


>Medtr6g061070.1 | B3 DNA-binding domain protein | LC |
           chr6:21113921-21116898 | 20130731
          Length = 473

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 21/172 (12%)

Query: 1   MNNSAEVSYRVKIFRATKASSPHHVEGAER--GKQTSPG-------NNFAERGSERIAKK 51
           M     +S+ + I  A K  S    +  +R  GK  +          NF E  S+   K 
Sbjct: 308 MTQREPLSFTITIIPAPKEPSLEQFQENQRVQGKSVTTRVEDMEYVGNFGEGSSKSCTKT 367

Query: 52  SSITNVLDNDYDGSENNSRRLENQFTITLKNTDRSIPM-GFINKYVTARVTYAILQAKNK 110
             + N +  D             +F + + + D+ I +   + ++         L+    
Sbjct: 368 HGLRNSVSPDS----------HEKFKVFVTSLDKLIVLPSLLKRHNIFSGDSVELKVGEG 417

Query: 111 EWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFVLKVS 162
            W V++ Y++      F + GW +FVR+C ++ GDTC+FEL+D +  V +VS
Sbjct: 418 TWFVEVSYNQYLDYGWF-TKGWPEFVRECNVKIGDTCLFELIDVQNHVFEVS 468


>Medtr3g005420.2 | B3 DNA-binding domain protein | LC |
           chr3:199288-196360 | 20130731
          Length = 488

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 77  TITLKNTDRSIPMGFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARF-LSSGWSKF 135
           +I  K     IP  F  KY+  +V   +  +  K+W V  C     GS+   +  G+S F
Sbjct: 394 SIIAKQNYTYIPRDFAEKYLKPKVPTKLQNSDGKQWEV-FCVPNTVGSSSMRIVKGFSNF 452

Query: 136 VRDCELEEGDTCVFELVDKEKFVLKVS 162
           V D  L   D CV+EL+ K+  VL+V+
Sbjct: 453 VTDNNLSHRDYCVYELIKKKPVVLEVT 479



 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%)

Query: 87  IPMGFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDT 146
           +P  F  KY+T +V + +  ++ K+W V      +  S   ++ G+ KF R+  L EG T
Sbjct: 169 VPSIFAEKYLTLKVPFKLQNSQGKQWEVYCVLHNKGNSQMRITGGFGKFARENNLLEGVT 228

Query: 147 CVFELVDKEKFVL 159
            VFEL+ ++  V+
Sbjct: 229 YVFELIKRKPVVV 241


>Medtr3g005420.1 | B3 DNA-binding domain protein | LC |
           chr3:199501-196328 | 20130731
          Length = 542

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 77  TITLKNTDRSIPMGFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARF-LSSGWSKF 135
           +I  K     IP  F  KY+  +V   +  +  K+W V  C     GS+   +  G+S F
Sbjct: 448 SIIAKQNYTYIPRDFAEKYLKPKVPTKLQNSDGKQWEV-FCVPNTVGSSSMRIVKGFSNF 506

Query: 136 VRDCELEEGDTCVFELVDKEKFVLKVS 162
           V D  L   D CV+EL+ K+  VL+V+
Sbjct: 507 VTDNNLSHRDYCVYELIKKKPVVLEVT 533



 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%)

Query: 87  IPMGFINKYVTARVTYAILQAKNKEWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDT 146
           +P  F  KY+T +V + +  ++ K+W V      +  S   ++ G+ KF R+  L EG T
Sbjct: 188 VPSIFAEKYLTLKVPFKLQNSQGKQWEVYCVLHNKGNSQMRITGGFGKFARENNLLEGVT 247

Query: 147 CVFELVDKEKFVL 159
            VFEL+ ++  V+
Sbjct: 248 YVFELIKRKPVVV 260


>Medtr3g061350.1 | plant-specific B3-DNA-binding domain protein | LC
           | chr3:24365409-24364010 | 20130731
          Length = 284

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 101 TYAILQAKNKEWHVQLCYDREDGSARFLSSGWSKFVRDCELEEGDTCVFELVDKEKFVLK 160
           T  +L    + W+V+L    E    R LS+GW  F+ +  L+ GD CVFEL++K+  V K
Sbjct: 221 TNVMLLIGKRSWNVKLLRCYEGKYNRRLSAGWHLFLTESGLKSGDVCVFELINKKDLVFK 280

Query: 161 V 161
           V
Sbjct: 281 V 281