Miyakogusa Predicted Gene
- Lj5g3v2242470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2242470.1 Non Characterized Hit- tr|K4A5H6|K4A5H6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si034130,25.93,8e-19,PPR,Pentatricopeptide repeat;
PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT
NAM,CUFF.57027.1
(304 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 545 e-155
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 264 1e-70
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 262 3e-70
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 261 6e-70
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 260 1e-69
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 2e-69
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 259 2e-69
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 259 3e-69
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 258 6e-69
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 254 6e-68
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 254 7e-68
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 253 2e-67
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 252 3e-67
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 252 3e-67
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 251 6e-67
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 249 2e-66
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 2e-66
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 2e-66
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 3e-66
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 248 4e-66
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 248 4e-66
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 248 5e-66
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 247 1e-65
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 247 1e-65
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 246 2e-65
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 246 2e-65
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 2e-65
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 2e-65
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 246 2e-65
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 246 2e-65
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 246 3e-65
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 246 3e-65
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 245 3e-65
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 5e-65
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 5e-65
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 244 6e-65
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 9e-65
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 243 1e-64
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 1e-64
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 243 1e-64
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 3e-64
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 3e-64
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 242 4e-64
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 241 5e-64
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 241 5e-64
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 241 7e-64
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 241 7e-64
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 241 9e-64
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 241 9e-64
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 241 9e-64
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 240 1e-63
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 240 2e-63
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 2e-63
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 239 3e-63
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 239 3e-63
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 239 3e-63
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 7e-63
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 7e-63
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 7e-63
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 237 1e-62
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 236 1e-62
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 236 2e-62
Medtr4g113830.1 | organelle transcript processing protein, putat... 236 2e-62
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 236 2e-62
Medtr1g059720.1 | organelle transcript processing protein, putat... 235 4e-62
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 235 4e-62
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 235 5e-62
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 234 6e-62
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 234 6e-62
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 234 6e-62
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 234 6e-62
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 7e-62
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 9e-62
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 1e-61
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 234 1e-61
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 234 1e-61
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 233 1e-61
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 233 1e-61
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 233 2e-61
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 233 2e-61
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 231 4e-61
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 231 4e-61
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 231 4e-61
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 231 1e-60
Medtr5g006420.1 | organelle transcript processing protein, putat... 230 1e-60
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 230 1e-60
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 230 1e-60
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 229 2e-60
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 229 2e-60
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 3e-60
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 4e-60
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 229 4e-60
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 228 4e-60
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 228 5e-60
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 6e-60
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 228 6e-60
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 7e-60
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 7e-60
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 7e-60
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 227 9e-60
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 227 1e-59
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 226 2e-59
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 226 2e-59
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 2e-59
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 2e-59
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 2e-59
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 2e-59
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 226 3e-59
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 226 3e-59
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 226 3e-59
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 225 4e-59
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 4e-59
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 224 6e-59
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 224 7e-59
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 7e-59
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 7e-59
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 7e-59
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 224 8e-59
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 9e-59
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 224 9e-59
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 224 1e-58
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 1e-58
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 1e-58
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 223 1e-58
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 223 2e-58
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 223 2e-58
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 3e-58
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 222 3e-58
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 222 4e-58
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 221 5e-58
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 221 5e-58
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 221 5e-58
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 221 7e-58
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 221 9e-58
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 220 1e-57
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 220 2e-57
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 219 2e-57
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 219 3e-57
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 218 4e-57
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 218 5e-57
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 218 5e-57
Medtr3g052720.1 | organelle transcript processing protein, putat... 218 6e-57
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 218 6e-57
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 218 7e-57
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 218 7e-57
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 217 9e-57
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 217 1e-56
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 217 1e-56
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 216 2e-56
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 216 2e-56
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 216 3e-56
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 3e-56
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 215 4e-56
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 215 5e-56
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 215 5e-56
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 214 6e-56
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 214 8e-56
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 214 1e-55
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 214 1e-55
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 213 2e-55
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 213 2e-55
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 212 3e-55
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 212 4e-55
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 211 5e-55
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 211 5e-55
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 211 8e-55
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 211 9e-55
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 211 9e-55
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 211 1e-54
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 211 1e-54
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 210 1e-54
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 210 1e-54
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 210 2e-54
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 209 2e-54
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 208 4e-54
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 208 5e-54
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 208 5e-54
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 207 8e-54
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 1e-53
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 207 1e-53
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 206 3e-53
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 206 3e-53
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 206 3e-53
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 206 3e-53
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 205 3e-53
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 205 4e-53
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 205 4e-53
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 204 6e-53
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 204 9e-53
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 204 9e-53
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 204 1e-52
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 203 1e-52
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 203 2e-52
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 202 3e-52
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 201 5e-52
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 201 9e-52
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 201 1e-51
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 200 1e-51
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 200 1e-51
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 200 2e-51
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 3e-51
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 199 3e-51
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 199 3e-51
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 198 5e-51
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 198 7e-51
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 197 1e-50
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 197 1e-50
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 3e-50
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 196 3e-50
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 195 4e-50
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 195 4e-50
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 194 1e-49
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 194 1e-49
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 194 1e-49
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 194 1e-49
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 193 1e-49
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 193 1e-49
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 192 2e-49
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 192 3e-49
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 3e-49
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 192 4e-49
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 191 6e-49
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 191 9e-49
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 190 1e-48
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 190 1e-48
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 190 2e-48
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 190 2e-48
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 189 2e-48
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 189 3e-48
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 189 3e-48
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 189 4e-48
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 189 4e-48
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 188 4e-48
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 188 5e-48
Medtr3g117150.1 | organelle transcript processing protein, putat... 187 1e-47
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 187 1e-47
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 187 2e-47
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 186 2e-47
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 185 6e-47
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 184 8e-47
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 183 1e-46
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 183 2e-46
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 182 3e-46
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 181 6e-46
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 180 1e-45
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 179 2e-45
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 179 3e-45
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 177 1e-44
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 177 1e-44
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 177 2e-44
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 175 5e-44
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 175 5e-44
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 175 6e-44
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 174 7e-44
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 174 9e-44
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 173 2e-43
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 165 5e-41
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 165 5e-41
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 165 6e-41
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 164 7e-41
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 163 2e-40
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 161 6e-40
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 157 1e-38
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 156 3e-38
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 153 2e-37
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 146 2e-35
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 141 6e-34
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 136 2e-32
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 133 2e-31
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 132 5e-31
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 131 6e-31
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 125 5e-29
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 123 2e-28
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 117 2e-26
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 116 3e-26
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 116 3e-26
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 116 3e-26
Medtr6g460480.1 | organelle transcript processing protein, putat... 115 5e-26
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 115 7e-26
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 115 7e-26
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 114 1e-25
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 114 1e-25
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 113 3e-25
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 110 2e-24
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 108 7e-24
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 108 9e-24
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 102 7e-22
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 101 8e-22
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 101 1e-21
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 2e-21
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 99 4e-21
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 4e-21
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 6e-21
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 99 7e-21
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 99 7e-21
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 2e-20
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 3e-19
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 3e-19
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 3e-19
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 6e-19
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 7e-19
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 92 8e-19
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 90 2e-18
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 90 3e-18
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 4e-18
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 6e-18
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 6e-18
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 89 7e-18
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 89 7e-18
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 7e-18
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 88 9e-18
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 9e-18
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 1e-17
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 1e-17
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 87 2e-17
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 87 2e-17
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 87 2e-17
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 87 2e-17
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 87 2e-17
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 87 2e-17
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 87 3e-17
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 3e-17
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 86 3e-17
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 3e-17
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 86 3e-17
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 86 4e-17
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 4e-17
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 86 5e-17
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 86 6e-17
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 85 8e-17
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 8e-17
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 85 8e-17
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 1e-16
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 1e-16
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 2e-16
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 4e-16
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 83 4e-16
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 82 4e-16
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 6e-16
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 82 7e-16
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 82 7e-16
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 8e-16
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 82 8e-16
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 82 9e-16
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 1e-15
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 81 1e-15
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 81 1e-15
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 81 1e-15
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 1e-15
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 80 2e-15
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 80 3e-15
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 80 3e-15
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 4e-15
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 79 5e-15
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 79 6e-15
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 7e-15
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 7e-15
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 7e-15
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 8e-15
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 78 8e-15
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 1e-14
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 78 1e-14
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 77 1e-14
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 77 2e-14
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 2e-14
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 2e-14
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 77 2e-14
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 3e-14
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 3e-14
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 76 3e-14
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 76 3e-14
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 76 3e-14
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 76 4e-14
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 76 4e-14
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 76 4e-14
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 76 4e-14
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 6e-14
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 75 6e-14
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 75 7e-14
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 7e-14
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 75 8e-14
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 75 8e-14
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 75 8e-14
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 8e-14
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 75 9e-14
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 75 1e-13
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 1e-13
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 74 2e-13
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 74 2e-13
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 5e-13
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 6e-13
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 72 7e-13
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 72 7e-13
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:... 72 7e-13
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 72 8e-13
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 72 8e-13
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 72 8e-13
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 72 9e-13
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 71 1e-12
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 71 1e-12
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 1e-12
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 71 1e-12
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 71 1e-12
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 71 1e-12
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 70 2e-12
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 70 2e-12
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 70 2e-12
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 70 2e-12
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 70 2e-12
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 3e-12
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 3e-12
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 70 3e-12
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 70 4e-12
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 69 4e-12
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 4e-12
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 69 5e-12
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 69 5e-12
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 69 5e-12
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 69 5e-12
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 69 5e-12
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 69 6e-12
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 6e-12
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 69 6e-12
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 69 6e-12
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 69 6e-12
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 8e-12
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 8e-12
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 69 8e-12
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 68 9e-12
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 68 9e-12
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 68 1e-11
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 1e-11
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 68 1e-11
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 68 1e-11
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 67 1e-11
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 67 2e-11
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 67 2e-11
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 67 2e-11
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 67 2e-11
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 67 3e-11
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 67 3e-11
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 66 4e-11
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 4e-11
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 66 4e-11
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 66 4e-11
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 66 4e-11
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 66 4e-11
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 66 4e-11
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 66 5e-11
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 66 5e-11
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 66 5e-11
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 65 6e-11
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 65 6e-11
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 65 6e-11
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 6e-11
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 65 7e-11
Medtr7g017610.1 | PPR containing plant-like protein | HC | chr7:... 65 7e-11
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 65 7e-11
Medtr6g065150.1 | PPR domain protein | LC | chr6:24123555-241231... 65 7e-11
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 65 8e-11
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505... 65 9e-11
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 65 9e-11
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 65 1e-10
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 64 1e-10
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 64 1e-10
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 64 2e-10
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 64 2e-10
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 64 2e-10
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 63 3e-10
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 63 3e-10
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 63 3e-10
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 63 3e-10
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 3e-10
Medtr5g012260.1 | PPR superfamily protein, putative | HC | chr5:... 63 4e-10
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 63 4e-10
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 4e-10
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 5e-10
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 62 6e-10
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 62 6e-10
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 62 6e-10
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 62 6e-10
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 545 bits (1405), Expect = e-155, Method: Compositional matrix adjust.
Identities = 254/305 (83%), Positives = 283/305 (92%), Gaps = 1/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKCN GNLSYK+FMKTSKKRTAPWNAVLSGF+HN LAR A+QLFK+ML+E+VQPD+ T
Sbjct: 360 MYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPT 419
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
FNSLLPAYAILADLKQAMN+HCYL++ GFL +LEVAS+LVDIYSKCG+LGYAH IF++IP
Sbjct: 420 FNSLLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIP 479
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
LKDKDIIIW+AII AYGKHG+GEMAVSLFN+MVQSG KPN+VTFTSVLHACSH GLVD+G
Sbjct: 480 LKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQG 539
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LSLF ML K+ +IP VDHYTCI+DLLGRAGRL+DAYNLIRTMPI NHAVWGALLGACV
Sbjct: 540 LSLFNLMLKKYQVIPSVDHYTCIVDLLGRAGRLNDAYNLIRTMPITHNHAVWGALLGACV 599
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
HENVELGE+AARWTFELEPENTGNY+LLA LYAAVGRWRD E+VR+MVNEVGLRK PA
Sbjct: 600 IHENVELGEIAARWTFELEPENTGNYVLLAKLYAAVGRWRDAERVRNMVNEVGLRKTPAN 659
Query: 300 SLVEV 304
SLVE+
Sbjct: 660 SLVEL 664
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F ++ WN +++G N+ A +A++++ +M+ E V D AT S+L A +L +
Sbjct: 171 VFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKN 230
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
++ + + G+ + V + L+D+Y KCG + A + N +++KD++ W+ +I
Sbjct: 231 VELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLN--GMEEKDVVTWTTLI 288
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
Y +G A+ L M GVKPN V+ S+L AC + + G L + ++ +I
Sbjct: 289 NGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIE 348
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
V T +ID+ + + +Y + K A W A+L V
Sbjct: 349 SEVVMETALIDMYAKCNEGNLSYKVFMKTS-KKRTAPWNAVLSGFV 393
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 128/276 (46%), Gaps = 6/276 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNAT 60
YA+C+ + + ++F K K+ WN ++ ++ +A+ +F +ML PD+ T
Sbjct: 57 YAQCHHASYASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFT 116
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++ A + L + + +H + GF V + L+ +Y G A +F +
Sbjct: 117 YPIVIKACSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFEL-- 174
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++ ++ W+ +I ++ E A+ +++ MV GV + T SVL AC + V+ G
Sbjct: 175 MQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELG 234
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ L+ V ++D+ + G +++A L+ M K + W L+ V
Sbjct: 235 REVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEK-DVVTWTTLINGYVV 293
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVG 276
+ + + R + +LE N + +A+L +A G
Sbjct: 294 NGDARSALMLCR-SMQLEGVKP-NLVSVASLLSACG 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F SLL Y+ L + +H +I G +++S L Y++C YA +F+ +P
Sbjct: 15 FESLLRKYSASNSLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFDKLP 74
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDE 179
+++ W+ ++ Y + G A+++F EM+ SG P+ T+ V+ ACS + VD
Sbjct: 75 --KRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDM 132
Query: 180 GLSL 183
G+ +
Sbjct: 133 GVGV 136
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 196/304 (64%), Gaps = 4/304 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSK-KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MYAKC ++F+ T K WN +++G++HN + EAI F++M +E+V+P+
Sbjct: 545 MYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLV 604
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF ++LPA + L+ L++AM H +IR GFL + + L+D+Y+KCG L Y+ F+
Sbjct: 605 TFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFH-- 662
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+++KD I W+A+++AY HG GE+AV+LF+ M +S V+ + V++ SVL AC H GL+ E
Sbjct: 663 EMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQE 722
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G +F M KHH+ P ++HY C++DLLG AG D+ +L+ M +P+ VWGALL AC
Sbjct: 723 GWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAAC 782
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H NV LGEVA +LEP N ++++L+++YA GRW D + R +N GL+K+P
Sbjct: 783 KIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPG 842
Query: 299 QSLV 302
S V
Sbjct: 843 YSWV 846
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 2/237 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + ++F+ + W+A LS + RE + +F+ M E ++PD A
Sbjct: 343 MYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAI 402
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ L+ ++++ +HCY I++ + + + LV +Y + YA +FN +
Sbjct: 403 LSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQ 462
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ KDI++W+ +I + K+G +A+ +FN + SG+ P+ T + AC+ + +D G
Sbjct: 463 I--KDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLG 520
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
L + K + ++D+ + G L L + W ++
Sbjct: 521 TCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAG 577
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + ++F + + W +++G++ N E +QL +M +V+ +
Sbjct: 242 MYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVA 301
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ L A + DL++ I+ Y ++ G + + VA+ +V +Y+KCG L A +F +
Sbjct: 302 VVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELF--LS 359
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ +D++ WSA ++A + G+ +S+F M G+KP++ + ++ C+ + + G
Sbjct: 360 LEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLG 419
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + +K + + T ++ + R A L M IK + VW L+
Sbjct: 420 KIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIK-DIVVWNTLING 475
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 121/239 (50%), Gaps = 5/239 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+ K C + + +F K K WNA++SG + EA+++F +M +E + D +
Sbjct: 143 MFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVS 202
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L PA + L D+ +IH Y++R V++ L+D+Y KCG + A +F+ +
Sbjct: 203 ILNLAPAVSRLGDVGCCKSIHGYVVRRSICGV--VSNSLIDMYCKCGDVHSAQRVFDRMG 260
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D + W+ ++A Y K+G + L ++M + VK N+V + L + + +++G
Sbjct: 261 VRDD--VSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKG 318
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
++ + L+ ++ + T I+ + + G L A L ++ + + W A L A V
Sbjct: 319 KEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGR-DLVAWSAFLSALV 376
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 132/279 (47%), Gaps = 15/279 (5%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL 74
F++ +N+ + + +AI L+ +L ++PD TFN +L A D
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
+ +NI+ ++ +G + + + L+D++ K G L A ++F+ +P+KD + W+A+I+
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDG--VCWNAMIS 173
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
+ + A+ +F M G + ++V+ ++ A S +G V S+ ++++ I
Sbjct: 174 GLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG 233
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH----ENVELGEVA 250
+V + +ID+ + G + A + M ++ + W ++ V + E ++L
Sbjct: 234 VVSN--SLIDMYCKCGDVHSAQRVFDRMGVRDD-VSWATMMAGYVKNGCYFEGLQLLHKM 290
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVN 289
R ++ N + + N V RD+EK +++ N
Sbjct: 291 RRGNVKM------NKVAVVNALLVVAEMRDLEKGKEIYN 323
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 3/165 (1%)
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ + +K+ +I++++ I AY K H A++L++ +++ G+KP++ TF VL AC+
Sbjct: 55 HFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALD 114
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
EG+++++ ++ + + V T +ID+ + G LD+A N+ MP+K + W A++
Sbjct: 115 FHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVK-DGVCWNAMIS 173
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDV 281
+S + W ++E +L NL AV R DV
Sbjct: 174 G-LSQSLNPCEALEMFWRMQMEGFEVDKVSIL-NLAPAVSRLGDV 216
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 189/306 (61%), Gaps = 6/306 (1%)
Query: 2 YAKCN----CGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
YA+CN L +M + WN++L+G + N A+QLF +M V ++PD
Sbjct: 482 YARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPD 541
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
T +L A + LA + + +H Y IR+G+ + + LVD+Y+KCGS+ + + ++N
Sbjct: 542 IYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYN 601
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
I + +++ +A++ AY HGHGE + +F M+ S V+P+ VTF SVL +C H G +
Sbjct: 602 KI--SNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSI 659
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G F M ++I P + HYTC++DLL RAG+LD+AY LI+ MP++ + W ALLG
Sbjct: 660 KIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGG 719
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H+ V LGE+AA ELEP NTGNY+LLANLYA+ GRW D+ K R+++N+ G++K P
Sbjct: 720 CFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSP 779
Query: 298 AQSLVE 303
S +E
Sbjct: 780 GCSWIE 785
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 34/276 (12%)
Query: 10 LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
L Y+M + ++ WN ++SG + N + +A+ LF+ +L+E ++PD+ T S+L +A
Sbjct: 358 LFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFA 417
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----- 124
+ ++Q IH I G V LV++Y KC + A F+ I +D
Sbjct: 418 DMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNA 477
Query: 125 ----------------------------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
++ W++I+A ++ ++A+ LFNEM S
Sbjct: 478 LISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSS 537
Query: 157 VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAY 216
++P+ T +L ACS + + G + + ++ ++D+ + G + Y
Sbjct: 538 LRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCY 597
Query: 217 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
+ + PN A+L A H + E G V R
Sbjct: 598 QVYNKIS-NPNLVCHNAMLTAYAMHGHGEEGIVIFR 632
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 138/291 (47%), Gaps = 21/291 (7%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
+L M + + W+AV+ GF N+ E+++LF +M+ V PD T S+LPA
Sbjct: 221 DLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPAC 280
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ + L +H Y++R VA+ LV +Y +CG + A IF+ K
Sbjct: 281 SRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFS--KFARKCAAS 338
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
++ +I Y ++G+ A LF +M Q GV+ +++++ ++ + D+ L LF+ +L
Sbjct: 339 YNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLL 398
Query: 189 KHHIIPLVDHYTCIIDLLG-------RAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
I P D +T L G R G+ + +++ ++ N V GAL+
Sbjct: 399 MEGIEP--DSFTLGSILTGFADMTCIRQGK--EIHSIAIVKGLQSNSFVGGALVEMYCKC 454
Query: 242 ENVELGEVAARWTF-ELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
++ +AA+ F E+ +T + L + YA R + K+R++V +
Sbjct: 455 NDI----IAAQMAFDEISERDTSTWNALISGYA---RCNQIGKIRELVERM 498
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV--QPDN 58
MY+ + ++ MF K + K W AVL ++ L + LF++ L + + + D
Sbjct: 75 MYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDF 134
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F +L L DL+ +H +++ GF+ + V + L+D+Y KCGSL A +
Sbjct: 135 FVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEG 194
Query: 119 IPLKD---------------------------------KDIIIWSAIIAAYGKHGHGEMA 145
+ KD +++ WSA+I + + + +
Sbjct: 195 MTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVES 254
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
V LF MV +GV P+ T SVL ACS + + G L ++++H + ++ +
Sbjct: 255 VELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGM 314
Query: 206 LGRAGRLDDAYNLIRTMPIK 225
R G + A+ + K
Sbjct: 315 YRRCGDMKSAFKIFSKFARK 334
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 8/186 (4%)
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
+ T++++L + L KQ +H + I++GF V + L+ +YS S A H+F+
Sbjct: 34 STTYSTILQSSNSLTLGKQ---LHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFD 90
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV--KPNQVTFTSVLHACSHVG 175
+ LK+ + W+A++ + G LF E + G+ K + F VL+ C +G
Sbjct: 91 KMTLKN--LHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLG 148
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
++ G + +LKH + V +ID+ G+ G LD+A ++ M K + W +++
Sbjct: 149 DLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQK-DCVSWNSII 207
Query: 236 GACVSH 241
ACV++
Sbjct: 208 TACVAN 213
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC Y+++ K S NA+L+ + + E I +F++ML V+PD+ T
Sbjct: 586 MYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVT 645
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF--LYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F S+L + +K + C+ + + L+ + +VD+ S+ G L A+ +
Sbjct: 646 FLSVLSSCVHAGSIK--IGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKN 703
Query: 119 IPLKDKDIIIWSAIIAAYGKHGH---GEMAVSLFNEMVQS 155
+P+ + D + WSA++ H GE+A E+ S
Sbjct: 704 MPM-EADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPS 742
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 261 bits (667), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 188/305 (61%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F K K WN ++ G+ NSL EA++LF M + +PD+ T
Sbjct: 716 MYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDIT 774
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LPA A LA L + IH +++R G+ L VA LVD+Y+KCG L A +F++IP
Sbjct: 775 MACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIP 834
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ +IA YG HG G A+S FNEM +G++P++ +F+ +L+ACSH GL++EG
Sbjct: 835 --KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEG 892
Query: 181 LSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M + P ++HY C++DLL R G L AY I +MPIKP+ +WG LL C
Sbjct: 893 WKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCR 952
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H +V+L E A FELEP+NT Y++LAN+YA +W +V+K+R + + G ++ P
Sbjct: 953 IHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGC 1012
Query: 300 SLVEV 304
S +EV
Sbjct: 1013 SWIEV 1017
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 129/227 (56%), Gaps = 3/227 (1%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++ +F + S+ WN++++G + N + +++F QML+ V+ D T S+L A+A
Sbjct: 524 AHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWAN 583
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+ +L +H + +++ F + ++ L+D+YSKCG+L A +F + + D I+ W+
Sbjct: 584 IGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVF--VKMGDTTIVSWT 641
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+ IAAY + G A+ LF+EM GV+P+ T TS++HAC+ +D+G + +++K+
Sbjct: 642 STIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN 701
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + +I++ + G +++A + +P+K + W ++G
Sbjct: 702 GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 747
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 120/225 (53%), Gaps = 3/225 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC N + ++F+K W + ++ ++ L +AI LF +M + V+PD T
Sbjct: 615 MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A A + L + ++H Y+I++G L V + L+++Y+KCGS+ A +F+ IP
Sbjct: 675 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 734
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ KDI+ W+ +I Y ++ A+ LF +M Q KP+ +T VL AC+ + +D+G
Sbjct: 735 V--KDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKG 791
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+ +L+ + ++D+ + G L A L +P K
Sbjct: 792 REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKK 836
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 4/219 (1%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
NCG+L K+F K + WN ++S + RE++ LFK+M V + TF
Sbjct: 416 NCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTC 475
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L +A L +K+ +H Y+++ GF V + L+ Y K G + AH++F+ L +
Sbjct: 476 VLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD--ELSE 533
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
D++ W+++I +G + +F +M+ GV+ + T SVL A +++G + G +L
Sbjct: 534 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRAL 593
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
F +K V ++D+ + G L+ A + M
Sbjct: 594 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 5/225 (2%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL 74
F T+ T NA ++ F R AI+L + ++ + ++ S+L A L
Sbjct: 328 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSL 385
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
+ +H +I +G + + LV +Y CG L IF+ I + DK + +W+ +++
Sbjct: 386 EDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI-MNDK-VFLWNLLMS 443
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
Y K G+ +VSLF +M + GV N TFT VL + +G V E + ++LK
Sbjct: 444 EYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 503
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+I + G ++ A+NL + +P+ W +++ CV
Sbjct: 504 NTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCV 547
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 196/305 (64%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC +++ +F K WNA++ G+ N EA+ LF M + ++PD+ T
Sbjct: 381 MYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFT 440
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A A L+ +QA IH IR+ + VA+ LVD+Y+KCG++ A +F++
Sbjct: 441 FVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMYAKCGAIETARELFDM-- 498
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDE 179
++++ +I W+A+I YG HG G+ A+ LF++M ++ +KPN +TF SV+ ACSH G V+E
Sbjct: 499 MQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEE 558
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GL F+ M + + + P +DHY ++DLLGRAG+LDDA+ I MPIKP V GA+LGAC
Sbjct: 559 GLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAGKLDDAWKFIHEMPIKPGITVLGAMLGAC 618
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+ELGE AA FEL+P+ G Y+L+AN+YA+ W V KVR + + GL K P
Sbjct: 619 KIHKNIELGEKAADRLFELDPDEGGYYMLVANMYASASMWDKVAKVRTAMEKKGLHKTPG 678
Query: 299 QSLVE 303
SLVE
Sbjct: 679 CSLVE 683
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + +YKMF++ ++ WN V++G+ N AR+A++L M + + D+ T
Sbjct: 179 LYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSIT 238
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+LPA A + L+ ++H Y +R GF + V++ L+D+Y KCG + +F
Sbjct: 239 LVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQ--R 296
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K+++ W+ +I ++G E A + F +M + V+P V+ LHACS++G ++ G
Sbjct: 297 MSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERG 356
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + + + + V +I + + R+D A ++ + K N W A++
Sbjct: 357 KFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTN-VTWNAMI 410
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
++ K N + ++F K ++ +L G++ NS E++ FK+M ++V+P
Sbjct: 78 LFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPVVYD 137
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F LL DLK+ M +H LI++GF L + +V++Y+KC + A+ +F +P
Sbjct: 138 FTYLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMP 197
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D++ W+ ++A Y ++G A+ L +M + G K + +T SVL A + V + G
Sbjct: 198 --ERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIG 255
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
S+ + ++ +V+ T ++D+ + G ++ + + M K N W ++
Sbjct: 256 RSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSK-NVVSWNTVIDGLAQ 314
Query: 241 HENVELGEVAARWTFE--LEPEN 261
+ E FE +EP N
Sbjct: 315 NGESEEAFATFLKMFEEKVEPTN 337
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 190/306 (62%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MYAK N ++ +F + +K T WN +++G+ N LA EAI + M D P+
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T+ S++PAY+ + L+Q M IH LI++ + VA+ L+D+Y KCG L A +F I
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI 487
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P +D + W+AIIA+ G HG GE A+ LF +M+ VK + +TF S+L ACSH GLVDE
Sbjct: 488 P-RDTSVP-WNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDE 545
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G F M K + I P + HY C++DLLGRAG L+ AY L+R MPI+P+ ++WGALL AC
Sbjct: 546 GQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSAC 605
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
+ N ELG +A+ E++ EN G Y+LL+N+YA +W V KVR + + GLRK P
Sbjct: 606 KIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPG 665
Query: 299 QSLVEV 304
S V V
Sbjct: 666 WSSVVV 671
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 119/233 (51%), Gaps = 10/233 (4%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAI----QLFKQMLVEDVQPDNATFNSL 64
+LS F KK WN+++S ++ EA+ QLF ++PD TF +
Sbjct: 71 SLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPI 130
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A L D K+ +HC + + GF + VA+ LV +YS+ G L AH +F +P+ K
Sbjct: 131 LKACVSLVDGKK---VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPV--K 185
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D+ W+A+I+ + ++G+ A+ + N M GVK + +T S+L C+ V G+ +
Sbjct: 186 DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIH 245
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+LKH + V +I++ + GRL DA + M ++ + W +++ A
Sbjct: 246 LHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAA 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 122/236 (51%), Gaps = 4/236 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y++ ++++K+F+ K WNA++SGF N A A+ + +M E V+ D T
Sbjct: 165 LYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTIT 224
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+LP A D+ + IH ++++ G + V++ L+++YSK G L A +F+
Sbjct: 225 VASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFD--Q 282
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ +D++ W++IIAAY ++ A+ F M G++P+ +T S+ S +
Sbjct: 283 MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRIS 342
Query: 181 LSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
S+ F+++ + V ++++ + G ++ A+ + +P K + W L+
Sbjct: 343 RSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLV 397
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
NA FNS + ++ +H L+ G + +++ L+++Y G + + F+
Sbjct: 26 NALFNSCV-------NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ----SGVKPNQVTFTSVLHACSH 173
I K+I W++II+AY + G A++ N++ ++P+ TF +L AC
Sbjct: 79 YI--HKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC-- 134
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
V LVD G + + K V ++ L R G LD A+ + MP+K + W A
Sbjct: 135 VSLVD-GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNA 192
Query: 234 LLGACVSHEN 243
++ + N
Sbjct: 193 MISGFCQNGN 202
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 188/305 (61%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F K K WN ++ G+ N L EA++LF M + +PD+ T
Sbjct: 441 MYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDIT 499
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LPA A LA L + IH +++R G+ L VA LVD+Y+KCG L A +F++IP
Sbjct: 500 MACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIP 559
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ +IA YG HG G A+S FNEM +G++P++ +F+++L+ACSH GL++EG
Sbjct: 560 --KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEG 617
Query: 181 LSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M + P ++HY C++DLL R G L AY I +MPIKP+ +WG LL C
Sbjct: 618 WKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCR 677
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H +V+L E A FELEP+NT Y++LAN+YA +W +V+K+R + + G ++ P
Sbjct: 678 IHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGC 737
Query: 300 SLVEV 304
S +EV
Sbjct: 738 SWIEV 742
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 129/227 (56%), Gaps = 3/227 (1%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++ +F + S+ WN++++G + N + +++F QML+ V+ D T S+L A A
Sbjct: 249 AHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACAN 308
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+ +L +H + +++ F + ++ L+D+YSKCG+L A +F + + D I+ W+
Sbjct: 309 IGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVF--VKMGDTTIVSWT 366
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+IIAAY + G A+ LF+EM GV+P+ T TS++HAC+ +D+G + +++K+
Sbjct: 367 SIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN 426
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + +I++ + G +++A + +P+K + W ++G
Sbjct: 427 GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 472
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 42/289 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC N + ++F+K W ++++ ++ L +AI LF +M + V+PD T
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A A + L + ++H Y+I++G L V + L+++Y+KCGS+ A +F+ IP
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 459
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ KDI+ W+ +I Y ++ A+ LF +M Q KP+ +T VL AC+ + +D+G
Sbjct: 460 V--KDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKG 516
Query: 181 LSLFQFMLK-------HHIIPLVDHY------------------------TCIIDLLGRA 209
+ +L+ H LVD Y T +I G
Sbjct: 517 REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMH 576
Query: 210 GRLDDA---YNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTF 255
G ++A +N +R I+P+ + + A+L AC SH G + W F
Sbjct: 577 GFGNEAISTFNEMRIAGIEPDESSFSAILNAC-SHS----GLLNEGWKF 620
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
NCG+L K+F K + WN ++S + RE++ LFK+M V + TF
Sbjct: 141 NCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTC 200
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L +A L +K+ +H Y+++ GF V + L+ Y K G + AH++F+ L +
Sbjct: 201 VLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD--ELSE 258
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
D++ W+++I +G + +F +M+ GV+ + T SVL AC+++G + G +L
Sbjct: 259 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRAL 318
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
F +K V ++D+ + G L+ A + M
Sbjct: 319 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 357
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 5/225 (2%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL 74
F T+ T NA ++ F R AI+L + ++ + ++ S+L A L
Sbjct: 53 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSL 110
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
+ +H +I +G + + LV +Y CG L IF+ I + DK + +W+ +++
Sbjct: 111 EDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI-MNDK-VFLWNLLMS 168
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
Y K G+ +VSLF +M + GV N TFT VL + +G V E + ++LK
Sbjct: 169 EYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 228
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+I + G ++ A+NL + +P+ W +++ CV
Sbjct: 229 NTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCV 272
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 194/305 (63%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK +L+Y+ F + K + WN ++ F N AI LF+QM + D+ +
Sbjct: 524 MYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVS 583
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ L A A L +HC+++R+ F+ VAS L+D+YSKCG L A +F+++
Sbjct: 584 LSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMD 643
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K++ + W++IIAAYG HG + LF+EMV++G++P+ VTF ++ AC H GLVDEG
Sbjct: 644 WKNE--VSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEG 701
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ F+ M + + I ++H+ C++DL GRAGRL +A++ I++MP P+ WG+LLGAC
Sbjct: 702 IYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACR 761
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H NVEL ++A++ EL+P N+G Y+LL+N++A G W V KVR ++ E G++K+P
Sbjct: 762 LHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGY 821
Query: 300 SLVEV 304
S ++V
Sbjct: 822 SWIDV 826
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 7/237 (2%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY+KC GNL + K+F + T WN +++G++ N EA+ LFK M+ V+ D+
Sbjct: 322 MYSKC--GNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDS 379
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF S LP+ LK +H Y++R G + + + S LVDIY K G + A F
Sbjct: 380 ITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ 439
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
L D+ + +A+I+ Y +G A++LF ++Q G+ PN +T SVL AC+ + +
Sbjct: 440 NTL--VDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLK 497
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G L +LK + + + I + ++GRLD AY R MP+K + W ++
Sbjct: 498 LGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMI 553
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 126/232 (54%), Gaps = 3/232 (1%)
Query: 10 LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
++ K F + + A A++SG++ N L EA+ LF+ ++ E + P+ T S+LPA A
Sbjct: 432 MACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACA 491
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
LA LK +HC +++ G +V S + +Y+K G L A+ F +P+KD + W
Sbjct: 492 ALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDS--VCW 549
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+ +I ++ ++G E+A+ LF +M SG K + V+ ++ L AC++ + G L F+++
Sbjct: 550 NLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVR 609
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ I + +ID+ + G+L A ++ M K N W +++ A +H
Sbjct: 610 NSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWK-NEVSWNSIIAAYGNH 660
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN +L+G++ N A+ F++M V+P++ +F LL A ++ + +H +I
Sbjct: 246 WNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI 305
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
RSGF VA+ ++ +YSKCG+L A IF+I+P D + W+ +IA Y ++G + A
Sbjct: 306 RSGFESDPTVANTIITMYSKCGNLFDARKIFDIMP--QTDTVTWNGLIAGYVQNGFTDEA 363
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
V+LF MV SGVK + +TF S L + G + + ++++H + V + ++D+
Sbjct: 364 VALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDI 423
Query: 206 LGRAGRLDDA 215
+ G ++ A
Sbjct: 424 YFKGGDVEMA 433
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY C +F + + PWN ++ GF A+ F +ML +V PD T
Sbjct: 120 MYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYT 179
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++ A L ++ +H GF L + S L+ +Y+ G + A ++F+ +P
Sbjct: 180 FPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELP 239
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D I+W+ ++ Y K+G A+ F EM S VKPN V+F +L C+ G+V G
Sbjct: 240 VRD--CILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAG 297
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ L +++ II + + G L DA + MP + + W L+ V
Sbjct: 298 IQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAGYVQ 356
Query: 241 H 241
+
Sbjct: 357 N 357
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 258 bits (658), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 194/292 (66%), Gaps = 3/292 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + K W ++++ +HN LA EA++LF ++ +++PD T S+L A A L+
Sbjct: 509 VFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSS 568
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
LK+ IH +LIR GF +A+ LVD+Y++CG++ A +IFN + K +D+I+W+++I
Sbjct: 569 LKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYV--KQRDLILWTSMI 626
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHI 192
A G HG G+ A+ LF++M V P+ +TF ++L+ACSH GLV EG F+ M ++ +
Sbjct: 627 NANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKL 686
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P +HY C++DLL R+ L++AY+ +R MPI+P+ VW ALLGAC H N +LGEVAA+
Sbjct: 687 EPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAK 746
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+L EN+GNY+L++N +AA GRW DVE+VR ++ L+K P S +EV
Sbjct: 747 KLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEV 798
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F K S++ WNA++ + EAI+L+K+M V V D T
Sbjct: 91 MYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFT 150
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L A + + IH ++ G+ + V + L+ +Y+KCG LG A +F+
Sbjct: 151 FPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGL 210
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ D + W++II+A+ G A+SLF M + GV+ N TF S L AC + G
Sbjct: 211 MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +LK + V +I + G+++DA + ++M K + W LL V
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFK-DCVSWNTLLSGMVQ 329
Query: 241 HE 242
++
Sbjct: 330 ND 331
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA C + ++F K WN +LSG + N + +AI F+ M +PD +
Sbjct: 295 MYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVS 354
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++ A A+L M +H Y I+ G + + + L+D+Y KC + Y F +P
Sbjct: 355 VLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KD+I W+ IIA Y ++ A++L ++ + + + S+L ACS GL E
Sbjct: 415 --EKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS--GLKSEK 470
Query: 181 L--SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
L + ++LK + ++ I+++ G +D A ++ ++ K + W +++ C
Sbjct: 471 LIKEIHGYVLKGGLADILIQ-NAIVNVYGELALVDYARHVFESINSK-DIVSWTSMITCC 528
Query: 239 V 239
V
Sbjct: 529 V 529
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 23 TAPWNAVLSGFIHNSLA-REAIQLFKQMLVEDVQ-----PDNATFNSLLPAYAILADLKQ 76
T P N L F H ++ +EA Q + + P ++ L A L Q
Sbjct: 5 TLPPNHTLPTFSHRPISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQ 64
Query: 77 AMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
+H + +++ +L + + + V +Y KCGS A +F+ + ++ I W+A+I A
Sbjct: 65 GQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFD--KMSERTIFTWNAMIGA 122
Query: 136 YGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
G A+ L+ EM GV + TF VL AC
Sbjct: 123 CVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC 158
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+C + +F ++ W ++++ + ++AI LF +M E+V PD+ T
Sbjct: 597 MYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHIT 656
Query: 61 FNSLLPAYA---ILADLKQAMNIHCYLIRSGFLYRLEV----ASILVDIYSKCGSLGYAH 113
F +LL A + ++ + KQ H ++++ Y+LE + LVD+ ++ SL A+
Sbjct: 657 FLALLYACSHSGLVVEGKQ----HFEIMKNE--YKLEPWPEHYACLVDLLARSNSLEEAY 710
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
H +P+ + +W A++ A H + ++ +++Q
Sbjct: 711 HFVRNMPI-EPSAEVWCALLGACRIHSNNDLGEVAAKKLLQ 750
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 254 bits (650), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 195/303 (64%), Gaps = 4/303 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC+ N+S+++F + S++ WNA++S IH EAI LF M++ED P+ AT
Sbjct: 460 MYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTAT 518
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A + LA L++ +H Y+ GF L + + LVD+Y+KCG L + +F+
Sbjct: 519 LVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFD--S 576
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +KD+I W+A+I+ YG +G+ E A+ +FN M +S VKPN++TF S+L AC+H GLV+EG
Sbjct: 577 MMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEG 636
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
++F M + + P + HYTC++DLLGR+ L++A L+ +MPI P+ VWGALL AC +
Sbjct: 637 KNVFAKMQSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKT 696
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKV-RDMVNEVGLRKLPAQ 299
H +E+G + + EPEN G YI++AN+Y+++GRW + E V R M + + K
Sbjct: 697 HNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGW 756
Query: 300 SLV 302
S+V
Sbjct: 757 SMV 759
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 150/321 (46%), Gaps = 44/321 (13%)
Query: 5 CNCGNLSY-KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
C G LS+ + + S+ WN ++ G+ + IQLF++M ++ ++ S
Sbjct: 362 CKFGMLSFAERLFQRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVS 421
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+ + L ++ +IHC +I+ + V + L+++Y KC + + IFN +
Sbjct: 422 AIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFN---RSE 478
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
+D+I+W+A+I+A+ H E A+SLF+ M+ PN T VL ACSH+ +++G L
Sbjct: 479 RDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERL 538
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA---------------------------- 215
+++ + + T ++D+ + G+L+ +
Sbjct: 539 HRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYA 598
Query: 216 ------YNLIRTMPIKPNHAVWGALLGACVSHENVELGE--VAARWTFELEPENTGNYIL 267
+NL+ +KPN + +LL AC VE G+ A ++ ++P N +Y
Sbjct: 599 ESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKP-NLKHYTC 657
Query: 268 LANLYAAVGRWRDVEKVRDMV 288
+ +L +GR ++E+ ++V
Sbjct: 658 MVDL---LGRSCNLEEAEELV 675
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 6/220 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y N S +F K T WN+ L SL + + + M E+V P++ T
Sbjct: 53 LYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFT 112
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNII 119
F + +YA ++ MN+H + GF V S V +YS+C + A +F+ I
Sbjct: 113 FPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEI 172
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG---VKPNQVTFTSVLHACSHVGL 176
P+ +D++ W+A++ Y ++G EM + +EM + G KPN T AC ++G
Sbjct: 173 PV--RDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGD 230
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAY 216
+ G L ++K+ I L+D + ++ + + G +AY
Sbjct: 231 LVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAY 270
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 129/302 (42%), Gaps = 13/302 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC +Y+ F + K W +++ + + + ++ F +ML V PD
Sbjct: 259 MYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMV 318
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + D+ H +IR + V + L+ +Y K G L +A +F
Sbjct: 319 IGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQ--- 375
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
I W+ +I YG+ G + LF EM G++ V S + +C +G ++ G
Sbjct: 376 RSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLG 435
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
S+ ++K + + +I++ G+ +++ ++ + + + +W AL+ A +
Sbjct: 436 RSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRS--ERDVILWNALISAHIH 493
Query: 241 ----HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR-K 295
E + L ++ E + NT +++ + + + E++ +NE G +
Sbjct: 494 VKHYEEAISLFDIM---IMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLN 550
Query: 296 LP 297
LP
Sbjct: 551 LP 552
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 105/221 (47%), Gaps = 11/221 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM--LVEDVQPDN 58
+Y++C+ N + K+F + + W A++ G++ N + ++ +M + +D Q N
Sbjct: 155 LYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPN 214
Query: 59 A-TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
A T A L DL +H ++++G L++ S ++ +Y KCG A+ F+
Sbjct: 215 ARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFS 274
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+ +KD++ W+++I Y + G V F EM+++ V P+ + +L + V
Sbjct: 275 --EVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDV 332
Query: 178 DEGLSLFQFMLKHHIIP--LVDH----YTCIIDLLGRAGRL 212
G + +++ H P +VD+ C +L A RL
Sbjct: 333 YGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERL 373
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 254 bits (649), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 196/310 (63%), Gaps = 9/310 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + + MF ++ WNA+++G+ N EA++LF + E + P + TF
Sbjct: 329 YAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTF 388
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYR------LEVASILVDIYSKCGSLGYAHHI 115
+LL A A LADLK H ++++ GF ++ + V + L+D+Y KCG + +
Sbjct: 389 GNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLV 448
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F + ++D + W+A+I Y ++G+G A+ +F EM+ SG +P+ VT VL ACSH G
Sbjct: 449 FE--RMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAG 506
Query: 176 LVDEGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
LV+EG FQ M ++H ++P+ DHYTC++DLLGRAG LD+A NLI+TMP++P+ VWG+L
Sbjct: 507 LVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSL 566
Query: 235 LGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
L AC H N+ LG+ A E++P N+G Y+LL+N+YA +GRW+DV +VR + ++G+
Sbjct: 567 LAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVI 626
Query: 295 KLPAQSLVEV 304
K P S + +
Sbjct: 627 KQPGCSWISI 636
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 15/219 (6%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F ++ WNA++SGF EA++ M ED + +F S L A A L D
Sbjct: 107 LFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMD 166
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L + IH + +S + + + S LVD+YSKC + A F+ + + ++I+ W+++I
Sbjct: 167 LSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDV--RNIVSWNSLI 224
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
Y ++G A+ +F M+ G++P+++T SV AC+ + + EGL + ++KH
Sbjct: 225 TCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKH--- 281
Query: 194 PLVDHY-------TCIIDLLGRAGRLDDAYNLIRTMPIK 225
D Y ++D+ + R+++A + MP++
Sbjct: 282 ---DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 129/271 (47%), Gaps = 37/271 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + + F + WN++++ + N A +A+++F +M+ ++PD T
Sbjct: 195 MYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEIT 254
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+ A A L+ +++ + IH +++ + L + + LVD+Y+KC + A +F+ +
Sbjct: 255 LASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 120 PLKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFN 150
PL+D ++++ W+A+IA Y ++G E AV LF
Sbjct: 315 PLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFL 374
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI------ID 204
+ + + P TF ++L+AC+++ + G +LKH + I ID
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLID 434
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + G ++D + M ++ ++ W A++
Sbjct: 435 MYMKCGLVEDGRLVFERM-LERDNVSWNAMI 464
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC +F + ++ WNA++ G+ N EA+++F++MLV +PD+ T
Sbjct: 435 MYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVT 494
Query: 61 FNSLLPAYAILADLKQAMNIHCYL----IRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
+L A + +++ CY I G + + + +VD+ + G L A+++
Sbjct: 495 MIGVLSACSHAGLVEEG---RCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLI 551
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGH 141
+P+ + D ++W +++AA HG+
Sbjct: 552 QTMPM-EPDAVVWGSLLAACKVHGN 575
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 191/306 (62%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ--PDN 58
YAKC S K+F + ++ WN+++SG+I N EA+ LF ML +D PDN
Sbjct: 164 FYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDN 223
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
AT ++LPA+A AD+ IHCY++++G V L+ +YS CG + A +F+
Sbjct: 224 ATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQ 283
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
IP D+++I+WSAII YG HG + A+S+F ++V+ G+ + + F S+L ACSH G+ +
Sbjct: 284 IP--DRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHE 341
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
EG LFQ M + ++ HY C++DLLGRAG L+ A LI++MPI+P V+GALLGA
Sbjct: 342 EGWHLFQTMETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYGALLGAS 401
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+EL E+AA F L+P N G Y++LA +Y GRW+D ++R ++ E ++K
Sbjct: 402 RIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYEDEGRWKDAARLRKIIREKEIKKPIG 461
Query: 299 QSLVEV 304
S VE+
Sbjct: 462 YSSVEL 467
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 110/227 (48%), Gaps = 9/227 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F S++ WN V+ G+ + EA+ ++ M + P+ T+ +L A
Sbjct: 75 KVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAER 134
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
D + IH +++ G + L V + V Y+KC + + +F+ + ++DI+ W+++
Sbjct: 135 DCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFD--EMLERDIVSWNSM 192
Query: 133 IAAYGKHGHGEMAVSLFNEMVQ-SGVK-PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
++ Y +G+ + AV LF +M++ G+ P+ T +VL A + + G + +++K
Sbjct: 193 MSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKT 252
Query: 191 --HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ P V +I L G + A + +P + N VW A++
Sbjct: 253 GMKLDPAVG--CGLITLYSNCGYIRMAKAVFDQIPDR-NVIVWSAII 296
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 48 QMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 107
Q L ++Q + + L + +KQ H +I G +A+ L+D YS+ G
Sbjct: 10 QFLEPNLQKTSFHYTDQLHHCKTIDRIKQT---HAQIIIGGHKQDPFIAAKLIDKYSQLG 66
Query: 108 SLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSV 167
H L ++D+ W+ +I Y G A+ ++N M SG PN+ T+ V
Sbjct: 67 GTNVEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFV 126
Query: 168 LHACS 172
L AC
Sbjct: 127 LKACG 131
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 193/304 (63%), Gaps = 4/304 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNAT 60
YAKC ++S K+F + WN++++ + N L+ EA LF M+ +V+ + T
Sbjct: 243 YAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVT 302
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++L A A L+ IH +++ L V + +VD+Y KCG + A F+
Sbjct: 303 LSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFD--R 360
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
LK K++ W+ ++A YG HGHG+ A+ +F EM++ G+KPN +TF SVL ACSH GL+ EG
Sbjct: 361 LKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG 420
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M + + P ++HY+C++DLLGRAG L +AY LI+ M +KP+ VWG+LLGAC
Sbjct: 421 WHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACR 480
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+NVELGE++AR F+L+P N G Y+LL+N+YA GRW DVE++R ++ GL K P
Sbjct: 481 IHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGY 540
Query: 300 SLVE 303
S+VE
Sbjct: 541 SIVE 544
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 146/291 (50%), Gaps = 27/291 (9%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED------- 53
MY+KC N + K+F + ++ W +++SG++ N AREA+ LFK+ L+ D
Sbjct: 130 MYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEI 189
Query: 54 ----VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 109
V D+ ++ A A + +H ++ GF L V + L+D Y+KCG +
Sbjct: 190 VGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEI 249
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVL 168
+ +F+ +++ D+ W+++IA Y ++G A SLF++MV+ G V+ N VT ++VL
Sbjct: 250 SVSRKVFD--GMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVL 307
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
AC+H G + G + ++K + + T I+D+ + GR++ A + + N
Sbjct: 308 LACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK-RKNV 366
Query: 229 AVWGALLGACVSHENVELGEVAARWTFEL-----EPENTGNYILLANLYAA 274
W ++ H + G+ A + +E+ +P NYI ++ AA
Sbjct: 367 KSWTVMVAGYGMHGH---GKEAMKVFYEMIRCGIKP----NYITFVSVLAA 410
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 14 MFMK-TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
MF K K WN++++ F + + +A+ F M + P+ +TF + + + L
Sbjct: 41 MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DL IH G+ + VAS L+D+YSKCG L A +F+ IP +++++ W+++
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP--ERNVVSWTSM 158
Query: 133 IAAYGKHGHGEMAVSLFNEMV 153
I+ Y ++ AV LF E +
Sbjct: 159 ISGYVQNERAREAVFLFKEFL 179
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++ K F + +K W +++G+ + +EA+++F +M+ ++P+ T
Sbjct: 344 MYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYIT 403
Query: 61 FNSLLPAYAILADLKQAMN----IHC-YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
F S+L A + LK+ + + C + + G +E S +VD+ + G L A+ +
Sbjct: 404 FVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPG----IEHYSCMVDLLGRAGYLKEAYGL 459
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ +K D I+W +++ A H + E+
Sbjct: 460 IQEMKVK-PDFIVWGSLLGACRIHKNVELG 488
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 193/304 (63%), Gaps = 4/304 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNAT 60
YAKC ++S K+F + WN++++ + N L+ EA LF M+ +V+ + T
Sbjct: 243 YAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVT 302
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++L A A L+ IH +++ L V + +VD+Y KCG + A F+
Sbjct: 303 LSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFD--R 360
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
LK K++ W+ ++A YG HGHG+ A+ +F EM++ G+KPN +TF SVL ACSH GL+ EG
Sbjct: 361 LKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG 420
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M + + P ++HY+C++DLLGRAG L +AY LI+ M +KP+ VWG+LLGAC
Sbjct: 421 WHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACR 480
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+NVELGE++AR F+L+P N G Y+LL+N+YA GRW DVE++R ++ GL K P
Sbjct: 481 IHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGY 540
Query: 300 SLVE 303
S+VE
Sbjct: 541 SIVE 544
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 146/291 (50%), Gaps = 27/291 (9%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED------- 53
MY+KC N + K+F + ++ W +++SG++ N AREA+ LFK+ L+ D
Sbjct: 130 MYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEI 189
Query: 54 ----VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 109
V D+ ++ A A + +H ++ GF L V + L+D Y+KCG +
Sbjct: 190 VGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEI 249
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVL 168
+ +F+ +++ D+ W+++IA Y ++G A SLF++MV+ G V+ N VT ++VL
Sbjct: 250 SVSRKVFD--GMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVL 307
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
AC+H G + G + ++K + + T I+D+ + GR++ A + + N
Sbjct: 308 LACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK-RKNV 366
Query: 229 AVWGALLGACVSHENVELGEVAARWTFEL-----EPENTGNYILLANLYAA 274
W ++ H + G+ A + +E+ +P NYI ++ AA
Sbjct: 367 KSWTVMVAGYGMHGH---GKEAMKVFYEMIRCGIKP----NYITFVSVLAA 410
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 14 MFMK-TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
MF K K WN++++ F + + +A+ F M + P+ +TF + + + L
Sbjct: 41 MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DL IH G+ + VAS L+D+YSKCG L A +F+ IP +++++ W+++
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP--ERNVVSWTSM 158
Query: 133 IAAYGKHGHGEMAVSLFNEMV 153
I+ Y ++ AV LF E +
Sbjct: 159 ISGYVQNERAREAVFLFKEFL 179
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++ K F + +K W +++G+ + +EA+++F +M+ ++P+ T
Sbjct: 344 MYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYIT 403
Query: 61 FNSLLPAYAILADLKQAMN----IHC-YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
F S+L A + LK+ + + C + + G +E S +VD+ + G L A+ +
Sbjct: 404 FVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPG----IEHYSCMVDLLGRAGYLKEAYGL 459
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ +K D I+W +++ A H + E+
Sbjct: 460 IQEMKVK-PDFIVWGSLLGACRIHKNVELG 488
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 192/305 (62%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA C +YK+F ++ WN+V++GF N EA+ LF++M ++ V+PD T
Sbjct: 184 IYAACGDTESAYKVFELMGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFT 243
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SL A A L L+ +H YL++ G L V + L+D Y+KCGS+ A +F+
Sbjct: 244 VVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFS--E 301
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +++++ W++++ +G GE A+ LF EM + + P ++TF VL+ACSH G++DEG
Sbjct: 302 MSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEG 361
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ F+ M + + I P ++HY C++DLL RAG + AY I++MP++PN +W LLGAC
Sbjct: 362 FNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTLLGACT 421
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H ++ LGE+A +LEP+++G+Y+LL+NLYA+ RW DV+ VR + E G+ K P
Sbjct: 422 VHGDLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWSDVQTVRRSMIEDGVWKTPGY 481
Query: 300 SLVEV 304
SLVE+
Sbjct: 482 SLVEL 486
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 111/210 (52%), Gaps = 3/210 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++ G+ + + A+ L+++ML V+PD T+ LL A + +++ IH +
Sbjct: 108 WNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISKSLNVRDGEMIHSVTV 167
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R+GF + V + L+ IY+ CG A+ +F + + ++D++ W+++I + +G A
Sbjct: 168 RNGFESLIFVRNSLLHIYAACGDTESAYKVFEL--MGERDLVAWNSVINGFALNGKPNEA 225
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+SLF EM GV+P+ T S+ AC+ +G ++ G + ++LK + + ++D
Sbjct: 226 LSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDF 285
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ G + +A + M + N W +L+
Sbjct: 286 YAKCGSIREAQQVFSEMSER-NVVSWTSLV 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 55/293 (18%)
Query: 45 LFKQMLVEDVQPDNATFNSLLPAYAIL---ADLKQAM-NIHCYLIRSGF-LYRLEVASIL 99
LFK + P N + + L A+L A KQ + IH + IR L ++ L
Sbjct: 20 LFKFSTLISTTPQNPSPHILTKCIALLQNCASSKQKLKQIHAFSIRHNVPLNNPDIGKYL 79
Query: 100 V-DIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
+ I S + YAH++F + L + ++ W+ +I Y + + A+ L+ +M+ S V+
Sbjct: 80 IFTIVSLSAPMSYAHNVFTL--LYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVE 137
Query: 159 PNQVTF-----------------------------------TSVLHACSHVGLVDEGLSL 183
P+ T+ S+LH + G + +
Sbjct: 138 PDTHTYPFLLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKV 197
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVS 240
F+ M + ++ + +I+ G+ ++A +L R M +K P+ +L AC
Sbjct: 198 FELMGERDLVA----WNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAE 253
Query: 241 HENVELGEVAARWTFELEPENTGNYIL---LANLYAAVGRWRDVEKVRDMVNE 290
+ELG + L+ TGN + L + YA G R+ ++V ++E
Sbjct: 254 LGALELGRRVH--VYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSE 304
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 194/313 (61%), Gaps = 13/313 (4%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK S +F + ++K W+A++SG++ N A EA+++F +M V PD
Sbjct: 253 YAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVL 312
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SL+ A + L DLK A + Y+ S L + V S LVD+ +KCG++ A +F +P
Sbjct: 313 VSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMP 372
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D++ + ++I + HGHGE AV+LFN M+ G+ P++ FT VL ACSH GLVD+G
Sbjct: 373 --KRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKG 430
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M +++ I P DH+ C++DLLGR+G+L DAY LI++M I+PN WGAL+GAC
Sbjct: 431 WKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACK 490
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVN----EVGLRK 295
H + ELGE+ A FELEP+N NY+LL+N+YAA GRW+DV VR ++N E+G+
Sbjct: 491 LHGDTELGEIVANRLFELEPQNAANYVLLSNIYAAAGRWKDVSLVR-ILNVQNMEIGMSS 549
Query: 296 LP----AQSLVEV 304
P AQ L V
Sbjct: 550 CPVDLEAQQLFHV 562
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 17/277 (6%)
Query: 9 NLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLP 66
LSY +F + T WN + +S + I F +M E PD+ T+ S++
Sbjct: 64 TLSYSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIK 123
Query: 67 AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
A + + ++H + R G L V + LVD+Y KCG +G A +F+ L D+++
Sbjct: 124 ACSGTCKVLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFD--ELSDRNV 181
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ W+A++ Y G A +F+EM V ++ +++ VG + +F
Sbjct: 182 VSWTAMVVGYVTAGDVVEAKKVFDEMPLRNV----ASWNAMIRGFVKVGDLSSARGVFDS 237
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
M + +++ +T +ID +AG ++ + L K + W AL+ V +N E
Sbjct: 238 MPEKNVVS----FTTMIDGYAKAGDMESSRFLFEQAAEK-DVVAWSALISGYV--QNGEA 290
Query: 247 GEVAARWTFELEPENT-GNYILLANLYAAVGRWRDVE 282
E A + E+E + +L +L +A + D++
Sbjct: 291 NE-ALKVFLEMESMKVIPDEFVLVSLMSAASQLGDLK 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 19/228 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F + S + W A++ G++ EA ++F +M + +V A+
Sbjct: 159 MYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPLRNV----AS 214
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+N+++ + + DL A + + + + ++D Y+K G + + +F
Sbjct: 215 WNAMIRGFVKVGDLSSARGVFDSMPEKNVVS----FTTMIDGYAKAGDMESSRFLFE--Q 268
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KD++ WSA+I+ Y ++G A+ +F EM V P++ S++ A S +G
Sbjct: 269 AAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLG----D 324
Query: 181 LSLFQFM---LKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMP 223
L L Q + + + I L Y + ++D+ + G ++ A L R MP
Sbjct: 325 LKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMP 372
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 189/305 (61%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC +L+ +F KK WNA++ G+ N EA+ LF M ++V+PD T
Sbjct: 364 MYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFT 423
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++ A A L+ + A IH IR+ + VA+ L+D+Y+KCG+ A +F++
Sbjct: 424 LVAVITALADLSVNRMAKWIHGLAIRTFMDNDVYVATALIDMYAKCGATQTARKLFDM-- 481
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ ++ +I W+A+I YG HG G+ A+ +F+ M + V PN TF SV+ ACSH G V+EG
Sbjct: 482 MHERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEG 541
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L FQ M + + + P +DHY+ ++DLLGRAG+L A+NLI MPIKP V GA+LGAC
Sbjct: 542 LHFFQSMKEDYGLEPSMDHYSAVVDLLGRAGKLHGAWNLIEEMPIKPGITVLGAMLGACK 601
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+NVELGE AA FEL+P+ G ++LLAN+Y + W V KVR + + G+ K P
Sbjct: 602 IHKNVELGEKAADKLFELDPDEGGYHVLLANMYVSASMWDKVAKVRTAMEKKGIHKTPGC 661
Query: 300 SLVEV 304
S VE+
Sbjct: 662 SFVEL 666
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 123/235 (52%), Gaps = 3/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y KC + ++K+F + S+K W ++++G+ N + A+ LF +M ++ D+ T
Sbjct: 162 FYVKCGEIDDAFKVFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVT 221
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+LPA A + DL+ +IH Y +R GF ++ V + L+ +Y +CG A +F
Sbjct: 222 LVSILPAVADIKDLRIGKSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFE--G 279
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +K + W+ +I Y + G E A + F +M+ GV+P +V + L AC+ +G ++ G
Sbjct: 280 MINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERG 339
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + +L+ + V ++ + + R+D A ++ + K N W A++
Sbjct: 340 RFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTN-VTWNAMI 393
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 15/247 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C C ++ +F K WN ++ G+ + EA F +ML E V+P
Sbjct: 263 MYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVA 322
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ L A A L DL++ +H +++ + + V + L+ +YSKC + A IF
Sbjct: 323 IMAALTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFE--N 380
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD-- 178
LK K + W+A+I Y ++G A+ LF M VKP+ T +V+ A + + +
Sbjct: 381 LKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMA 440
Query: 179 ---EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV-WGAL 234
GL++ FM + T +ID+ + G A L M H + W A+
Sbjct: 441 KWIHGLAIRTFMDNDVYVA-----TALIDMYAKCGATQTARKLFDMM--HERHVITWNAM 493
Query: 235 LGACVSH 241
+ +H
Sbjct: 494 IDGYGTH 500
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+ K N + +F K+ ++A+L G+ NS +A+ + +M + V+P
Sbjct: 61 MFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVRPVVYD 120
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F LL +L++ IH +I +GF Y L ++ Y KCG + A +F
Sbjct: 121 FAYLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFE--R 178
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L +KD++ W+++IA Y ++G+ + A+ LF M ++G+K + VT S+L A + + + G
Sbjct: 179 LSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIG 238
Query: 181 LSLFQFMLK 189
S+ + L+
Sbjct: 239 KSIHGYALR 247
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 182/293 (62%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K F ++ W A+++G+ + EA+ +F ++ + + ATF L A +A
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ IH ++ G+ V + L+ +Y KCGS+ A+ F I ++KD++ W+ +
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGI--EEKDVVSWNTM 466
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
+A Y +HG G A+++F M +GVKP+++T VL ACSH GL+D G F M K +
Sbjct: 467 LAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYG 526
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+IP HYTC+IDLLGRAGRL++A +LIR MP +P A WGALLGA H N ELGE AA
Sbjct: 527 VIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAA 586
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
F++EP+N+G Y+LL+NLYAA GRW D +K+R + ++G++K+P S VEV
Sbjct: 587 EMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEV 639
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 48/280 (17%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL+ +F + ++ WN +L+G++ N +A +LF M +DV ++NSLL Y
Sbjct: 97 NLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDV----VSWNSLLSGY 152
Query: 69 AILADLKQAMNIH---------------------------CYLIRSGFLYRLEVASILVD 101
A + +A + C L S + L + L+
Sbjct: 153 AQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMG 212
Query: 102 IYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
+ + LG A +F+ +P+ +D I W+ +I+ Y + G A LF+E V
Sbjct: 213 GFVRKKKLGDARWLFDKMPV--RDAISWNTMISGYAQGGGLSQARRLFDESPTRDV---- 266
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
T+T+++ G++DE + F M + + + Y +I + ++D A L +
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS----YNAMIAGYVQTKKMDIARELFES 322
Query: 222 MPIKPNHAVWGALLGACVSHENVELGEVA-ARWTFELEPE 260
MP + N + W ++ ++G++A AR F++ P+
Sbjct: 323 MPCR-NISSWNTMITGY-----GQIGDIAQARKFFDMMPQ 356
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+ + + ++F +K + WN +L+ ++HN EA LF+ D+ ++
Sbjct: 152 YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL----ISW 207
Query: 62 NSLLPAYAILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
N L+ + L A + + +R + + ++ Y++ G L A +F+ P
Sbjct: 208 NCLMGGFVRKKKLGDARWLFDKMPVRDAISW-----NTMISGYAQGGGLSQARRLFDESP 262
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D+ W+A+++ Y ++G + A + F+EM + N+V++ +++ +D
Sbjct: 263 T--RDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIA 316
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
LF+ M +I + +I G+ G + A MP + + W A++
Sbjct: 317 RELFESMPCRNI----SSWNTMITGYGQIGDIAQARKFFDMMPQR-DCVSWAAIIAG 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + F +K WN +L+G+ + R+A+ +F+ M V+PD T
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEIT 497
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+L A + L + + + G + + + ++D+ + G L A + +
Sbjct: 498 MVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNM 557
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P + W A++ A HG+ E+
Sbjct: 558 PFQ-PGAASWGALLGASRIHGNTELG 582
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 180/280 (64%), Gaps = 3/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W ++++ + N EA++LF+ M + V+P+ T SL+PA ++ L IHC+ +
Sbjct: 203 WTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSL 262
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R G + V S L+D+Y+ CG + + + F+ +P ++ ++ W++I++ Y HG +
Sbjct: 263 RKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPFRN--LVSWNSIMSGYAMHGKAKET 320
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTCIID 204
+ +F+ M+QSG KP+ +TFTSVL AC+ GL +EG F M K + + P ++HY C++
Sbjct: 321 IEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVT 380
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
LL R G+L++AY++I+ MP +P+ VWGALL +C H N+ LGE+AA F LEP+N GN
Sbjct: 381 LLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHHNLSLGEIAAEKLFVLEPDNPGN 440
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
YILL+N+YA+ G W + +VRDM+ GL+K P S +E+
Sbjct: 441 YILLSNIYASKGMWDEENRVRDMMKSKGLQKNPGCSWIEI 480
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 38/277 (13%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
Y++ + + ++F + K+ P WN +++GF + L EA++LF +M+ E PD
Sbjct: 39 YSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPD 98
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
+T + +LP L D+ +H Y+I+ G V S L+D+Y +CG +F+
Sbjct: 99 GSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFD 158
Query: 118 IIPLK---------------------------------DKDIIIWSAIIAAYGKHGHGEM 144
I + +++ W++IIA+ ++G
Sbjct: 159 EIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDME 218
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A+ LF +M GV+PN VT S++ AC ++ + G + F L+ I V + +ID
Sbjct: 219 ALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALID 278
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ GR+ + N MP + N W +++ H
Sbjct: 279 MYANCGRIRLSQNCFDEMPFR-NLVSWNSIMSGYAMH 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 97 SILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
S LV +Y KC + A +F+ + D+D+I+WSA+IA Y + G+ + A +F EM + G
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFD--GMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEG 59
Query: 157 VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLG 207
V+PN V++ ++ +VGL DE + LF M+ +P +C++ +G
Sbjct: 60 VEPNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVG 110
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA C LS F + + WN+++SG+ + A+E I++F ML +PD+ T
Sbjct: 279 MYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSIT 338
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F S+L A ++ + + + ++E + +V + S+ G L A+ I +
Sbjct: 339 FTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIKEM 398
Query: 120 PLKDKDIIIWSAIIAAYGKH 139
P + D +W A++++ H
Sbjct: 399 PF-EPDACVWGALLSSCRVH 417
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 191/305 (62%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C C + + ++F + ++K T WN +++GF + E++ +F QM+ E P+ T
Sbjct: 254 MYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFT 312
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A A LA L +H +I G LE+++ L+D+Y+KCG++ +H IF+
Sbjct: 313 FTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFS--G 370
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ +++ W++++ YG HGHG+ AV LFNEMV SG+KP+++ F +VL ACSH GLVDEG
Sbjct: 371 MRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEG 430
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F+ M ++ + P D Y C++DLL RAGR+ +AY LI MP KP+ ++W ALLGAC
Sbjct: 431 LRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACK 490
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
++ + ++AA E++P G Y+LL+N AA G W D +R ++ +K +
Sbjct: 491 KYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGR 550
Query: 300 SLVEV 304
S +E+
Sbjct: 551 SWIEL 555
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 114/237 (48%), Gaps = 7/237 (2%)
Query: 1 MYAKCNCGNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYA C C ++ +F K W +++G+ H A +++F+QM +E+ +
Sbjct: 152 MYATC-CDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSP 210
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+F+ + A A + +H +I GF L V + ++D+Y +C A +F
Sbjct: 211 FSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFG- 269
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ KD I W+ +IA + E ++ +F++MV G PN TFTSV+ AC+++ ++
Sbjct: 270 -EMTQKDTITWNTLIAGFETLDSYE-SLCIFSQMVSEGFSPNCFTFTSVIAACANLAILY 327
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G L ++ + ++ +ID+ + G + D++ + M N W +++
Sbjct: 328 CGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMR-HTNLVSWTSMM 383
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
L+ Y GS AH +F+ +P +D+I W+++I Y H A ++F M++ GVK
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMP--HRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVK 104
Query: 159 PNQVTFTSVLHAC 171
PN T ++VL AC
Sbjct: 105 PNAFTVSAVLKAC 117
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 98/229 (42%), Gaps = 5/229 (2%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++ +F + + W ++++G+ + A +F ML + V+P+ T +++L A
Sbjct: 60 AHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKS 119
Query: 71 LADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKC-GSLGYAHHIFNIIPLKDKDIII 128
L L +H I+ G + V + L+D+Y+ C S+ A +F I K+ +
Sbjct: 120 LKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNA--VS 177
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+ +I Y + +F +M + + +F+ + AC+ +G + G + ++
Sbjct: 178 WTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVI 237
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
H + I+D+ R +A L M K + W L+
Sbjct: 238 NHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQK-DTITWNTLIAG 285
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 190/302 (62%), Gaps = 7/302 (2%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE--DVQPDNATFNS 63
G +SY +F K W+A+++ + N + +A++LF+ M++E D P+ T S
Sbjct: 228 GYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVS 287
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L A A LA L+ +H Y++R G L V + L+ +Y +CG + +F+ +K
Sbjct: 288 VLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDY--MKK 345
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
+D+I W+++I+ YG HG G+ A+ +F M+ GV P+ +TF +VL ACSH GLV+E L
Sbjct: 346 RDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKIL 405
Query: 184 FQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
F+ ML K+ I P ++HY C++D+LGRA RLD+A LI+ M KP VWG+LLG+C H
Sbjct: 406 FESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHC 465
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
NVEL E A+ FELEP+N GNY+LL+++YA W DV +VR + GL+K+P+ S +
Sbjct: 466 NVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWI 525
Query: 303 EV 304
EV
Sbjct: 526 EV 527
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 11/240 (4%)
Query: 5 CNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C+ G++ + K+F +T +K WNA+ S + + L+ QM + + T+
Sbjct: 120 CDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYT 179
Query: 63 SLLPAYAI----LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+L A + + L++ IH +++R G+ + V + L+D+Y++ G + YA +F
Sbjct: 180 YVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGA 239
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK--PNQVTFTSVLHACSHVGL 176
+P DK+I+ WSA+IA Y K+ A+ LF M+ PN +T SVL AC+ +
Sbjct: 240 MP--DKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAA 297
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
++ G + ++L+ + + +I + GR G + + M K + W +L+
Sbjct: 298 LEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK-KRDVISWNSLIS 356
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 48 QMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 107
Q+L + P TF L+ + L +++H L+ SG +A+ L+++Y G
Sbjct: 64 QLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLG 123
Query: 108 SLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSV 167
S+ +A +F+ ++K I +W+AI A GE + L+ +M G+ N+ T+T V
Sbjct: 124 SVDHACKVFD--ETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYV 181
Query: 168 LHAC--SHVGL--VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP 223
L AC S + + + +G + +L+H V T ++D+ R G + A ++ MP
Sbjct: 182 LKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMP 241
Query: 224 IKPNHAVWGALLGACVSHE 242
K N W A++ +E
Sbjct: 242 DK-NIVSWSAMIACYAKNE 259
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 187/303 (61%), Gaps = 6/303 (1%)
Query: 5 CNCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C G+L K+F + ++ WN ++S EA +F++ML + +PD+AT
Sbjct: 185 CKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLV 244
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++LP A L D+ IH Y G L + + V + LVD Y KCG+L A +FN +
Sbjct: 245 TVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFN--EM 302
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K+++ W+A+I+ G +G GE+ V LF +M + GV P+ TF VL C+H G VD+G
Sbjct: 303 TKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGR 362
Query: 182 SLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+F M +K + P ++HY C++DLLGR G + +AY+LIR MP+ PN A+WGALL AC +
Sbjct: 363 EIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRT 422
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H + E+ E+AA+ LEP N+GNY+LL+N+YA +W +VEKVR ++ VG++K P QS
Sbjct: 423 HGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQS 482
Query: 301 LVE 303
++
Sbjct: 483 ALQ 485
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 41 EAIQLFKQM-LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
++ F M + ++ PDN TF LL A + L D +H ++ GF V L
Sbjct: 90 QSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGL 149
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFN--------- 150
+++YS CG + A+ +F+ + +++++W+ +I + K G E+ + LF
Sbjct: 150 LEVYSNCGKMEDANKVFD--EMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVS 207
Query: 151 ----------------------EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
EM++ G +P+ T +VL C+ +G VD G + +
Sbjct: 208 WNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYAD 267
Query: 189 KHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
++ ++ ++D + G L+ A+ + M K N W A++ + ELG
Sbjct: 268 GKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEM-TKKNVVSWNAMISGLGLNGKGELG 326
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 185/304 (60%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F K + K W A+L G+ N + EA++ F M ++PD+ T
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ + A LA L++ H + SG + + V++ LV +Y KCGS+ +H +FN I
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+ + W+A+++ Y + G + LF M+ G+KP++VTF VL ACS GLV++G
Sbjct: 439 FKDE--VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKG 496
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F+ M+ H I+P+ DHYTC+IDL RAGR+++A N I MP P+ W LL +C
Sbjct: 497 NQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCR 556
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ N+++G+ AA + EL+P NT +Y+LL+++YAA G+W +V ++R + + GLRK P
Sbjct: 557 FYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGC 616
Query: 300 SLVE 303
S ++
Sbjct: 617 SWIK 620
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 160/301 (53%), Gaps = 17/301 (5%)
Query: 7 CGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
CG + S ++F + ++ + W ++++GF N L R+AI +F++M +E++Q D TF S+
Sbjct: 222 CGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSV 281
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A + L++ +H Y+IR+ + + VAS LV++Y KC ++ A +F + K
Sbjct: 282 LTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFK--KMTCK 339
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++ W+A++ YG++G+ E AV F++M + G++P+ T SV+ +C+++ ++EG
Sbjct: 340 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 399
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG--ACVSHE 242
L +I + ++ L G+ G ++D++ L + K + W AL+ A
Sbjct: 400 ARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKA 458
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEK----VRDMVNEVGLRKLPA 298
N +G + L+P+ + + +A R VEK M+NE G+ +P
Sbjct: 459 NETIGLFESMLAHGLKPDK----VTFIGVLSACSRAGLVEKGNQIFESMINEHGI--VPI 512
Query: 299 Q 299
Q
Sbjct: 513 Q 513
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 118/253 (46%), Gaps = 32/253 (12%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATFNSLLPAYAIL 71
+F ++ WN+++SG+ L ++++ + ML D + + TF++LL +
Sbjct: 97 LFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKR 156
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP----------- 120
+K IH ++++ GF+ + V S LVD+YSK G + A +F+ +P
Sbjct: 157 GCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLI 216
Query: 121 ------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
++++D I W+++I + ++G A+ +F EM ++ +Q
Sbjct: 217 MGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQY 276
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
TF SVL AC V + EG + ++++ + + ++++ + + A + + M
Sbjct: 277 TFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKM 336
Query: 223 PIKPNHAVWGALL 235
K N W A+L
Sbjct: 337 TCK-NVVSWTAML 348
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 185/304 (60%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F K + K W A+L G+ N + EA++ F M ++PD+ T
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ + A LA L++ H + SG + + V++ LV +Y KCGS+ +H +FN I
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+ + W+A+++ Y + G + LF M+ G+KP++VTF VL ACS GLV++G
Sbjct: 439 FKDE--VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKG 496
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F+ M+ H I+P+ DHYTC+IDL RAGR+++A N I MP P+ W LL +C
Sbjct: 497 NQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCR 556
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ N+++G+ AA + EL+P NT +Y+LL+++YAA G+W +V ++R + + GLRK P
Sbjct: 557 FYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGC 616
Query: 300 SLVE 303
S ++
Sbjct: 617 SWIK 620
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 160/301 (53%), Gaps = 17/301 (5%)
Query: 7 CGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
CG + S ++F + ++ + W ++++GF N L R+AI +F++M +E++Q D TF S+
Sbjct: 222 CGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSV 281
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A + L++ +H Y+IR+ + + VAS LV++Y KC ++ A +F + K
Sbjct: 282 LTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFK--KMTCK 339
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++ W+A++ YG++G+ E AV F++M + G++P+ T SV+ +C+++ ++EG
Sbjct: 340 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 399
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG--ACVSHE 242
L +I + ++ L G+ G ++D++ L + K + W AL+ A
Sbjct: 400 ARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKA 458
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEK----VRDMVNEVGLRKLPA 298
N +G + L+P+ + + +A R VEK M+NE G+ +P
Sbjct: 459 NETIGLFESMLAHGLKPDK----VTFIGVLSACSRAGLVEKGNQIFESMINEHGI--VPI 512
Query: 299 Q 299
Q
Sbjct: 513 Q 513
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 118/253 (46%), Gaps = 32/253 (12%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATFNSLLPAYAIL 71
+F ++ WN+++SG+ L ++++ + ML D + + TF++LL +
Sbjct: 97 LFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKR 156
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP----------- 120
+K IH ++++ GF+ + V S LVD+YSK G + A +F+ +P
Sbjct: 157 GCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLI 216
Query: 121 ------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
++++D I W+++I + ++G A+ +F EM ++ +Q
Sbjct: 217 MGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQY 276
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
TF SVL AC V + EG + ++++ + + ++++ + + A + + M
Sbjct: 277 TFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKM 336
Query: 223 PIKPNHAVWGALL 235
K N W A+L
Sbjct: 337 TCK-NVVSWTAML 348
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 185/304 (60%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F K + K W A+L G+ N + EA++ F M ++PD+ T
Sbjct: 328 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 387
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ + A LA L++ H + SG + + V++ LV +Y KCGS+ +H +FN I
Sbjct: 388 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 447
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+ + W+A+++ Y + G + LF M+ G+KP++VTF VL ACS GLV++G
Sbjct: 448 FKDE--VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKG 505
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F+ M+ H I+P+ DHYTC+IDL RAGR+++A N I MP P+ W LL +C
Sbjct: 506 NQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCR 565
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ N+++G+ AA + EL+P NT +Y+LL+++YAA G+W +V ++R + + GLRK P
Sbjct: 566 FYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGC 625
Query: 300 SLVE 303
S ++
Sbjct: 626 SWIK 629
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 159/301 (52%), Gaps = 17/301 (5%)
Query: 7 CGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
CG + S ++F + ++ + W ++++GF N L R+AI +F++M +E++Q D TF S+
Sbjct: 231 CGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSV 290
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A + L++ +H Y+IR+ + + VAS LV +Y KC ++ A +F + K
Sbjct: 291 LTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFK--KMTCK 348
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++ W+A++ YG++G+ E AV F++M + G++P+ T SV+ +C+++ ++EG
Sbjct: 349 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 408
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG--ACVSHE 242
L +I + ++ L G+ G ++D++ L + K + W AL+ A
Sbjct: 409 ARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKA 467
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEK----VRDMVNEVGLRKLPA 298
N +G + L+P+ + + +A R VEK M+NE G+ +P
Sbjct: 468 NETIGLFESMLAHGLKPDK----VTFIGVLSACSRAGLVEKGNQIFESMINEHGI--VPI 521
Query: 299 Q 299
Q
Sbjct: 522 Q 522
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 32/253 (12%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATFNSLLPAYAIL 71
+F ++ WN+++SG+ L ++++ + ML D + TF++LL +
Sbjct: 106 LFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKR 165
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP----------- 120
+K IH ++++ GF+ + V S LVD+YSK G + A +F+ +P
Sbjct: 166 GCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLI 225
Query: 121 ------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
++++D I W+++I + ++G A+ +F EM ++ +Q
Sbjct: 226 MGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQY 285
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
TF SVL AC V + EG + ++++ + + ++ + + + A + + M
Sbjct: 286 TFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKM 345
Query: 223 PIKPNHAVWGALL 235
K N W A+L
Sbjct: 346 TCK-NVVSWTAML 357
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 185/304 (60%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F K + K W A+L G+ N + EA++ F M ++PD+ T
Sbjct: 328 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 387
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ + A LA L++ H + SG + + V++ LV +Y KCGS+ +H +FN I
Sbjct: 388 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 447
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+ + W+A+++ Y + G + LF M+ G+KP++VTF VL ACS GLV++G
Sbjct: 448 FKDE--VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKG 505
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F+ M+ H I+P+ DHYTC+IDL RAGR+++A N I MP P+ W LL +C
Sbjct: 506 NQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCR 565
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ N+++G+ AA + EL+P NT +Y+LL+++YAA G+W +V ++R + + GLRK P
Sbjct: 566 FYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGC 625
Query: 300 SLVE 303
S ++
Sbjct: 626 SWIK 629
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 159/301 (52%), Gaps = 17/301 (5%)
Query: 7 CGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
CG + S ++F + ++ + W ++++GF N L R+AI +F++M +E++Q D TF S+
Sbjct: 231 CGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSV 290
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A + L++ +H Y+IR+ + + VAS LV +Y KC ++ A +F + K
Sbjct: 291 LTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFK--KMTCK 348
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++ W+A++ YG++G+ E AV F++M + G++P+ T SV+ +C+++ ++EG
Sbjct: 349 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 408
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG--ACVSHE 242
L +I + ++ L G+ G ++D++ L + K + W AL+ A
Sbjct: 409 ARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKA 467
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEK----VRDMVNEVGLRKLPA 298
N +G + L+P+ + + +A R VEK M+NE G+ +P
Sbjct: 468 NETIGLFESMLAHGLKPDK----VTFIGVLSACSRAGLVEKGNQIFESMINEHGI--VPI 521
Query: 299 Q 299
Q
Sbjct: 522 Q 522
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 32/253 (12%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATFNSLLPAYAIL 71
+F ++ WN+++SG+ L ++++ + ML D + TF++LL +
Sbjct: 106 LFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKR 165
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP----------- 120
+K IH ++++ GF+ + V S LVD+YSK G + A +F+ +P
Sbjct: 166 GCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLI 225
Query: 121 ------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
++++D I W+++I + ++G A+ +F EM ++ +Q
Sbjct: 226 MGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQY 285
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
TF SVL AC V + EG + ++++ + + ++ + + + A + + M
Sbjct: 286 TFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKM 345
Query: 223 PIKPNHAVWGALL 235
K N W A+L
Sbjct: 346 TCK-NVVSWTAML 357
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 185/293 (63%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F+ +K WN ++ ++ NSL +A+ L+ QM V+PD TF S+LPA L+
Sbjct: 243 KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLS 302
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L IH Y+ + L + + L+D+Y++CG L A +F+ +K +D+ W+++
Sbjct: 303 ALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFD--RMKFRDVASWTSL 360
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HH 191
I+AYG G G AV+LF EM+ SG P+ + F ++L ACSH GL+DEG F+ M +
Sbjct: 361 ISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYR 420
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P ++HY C++DLLGRAGR+D+AYN+I+ MPI+PN VW LL +C N+++G +AA
Sbjct: 421 ITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAA 480
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+L PE +G Y+LL+N+YA GRW++V ++R ++ +RK P S VE+
Sbjct: 481 DNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVEL 533
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 36/237 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C + ++F + K WN++++G+ HN +A+++ ++M +PD T
Sbjct: 163 MYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCT 222
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SL+PA A + ++ Y IF +
Sbjct: 223 MASLMPAVA---------------------------------NTSSENVLYVEKIF--VN 247
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ K++I W+ +I Y K+ AV L+ +M + V+P+ +TF SVL AC + + G
Sbjct: 248 LERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLG 307
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ +++ K + P + +ID+ R G LDDA + M + + A W +L+ A
Sbjct: 308 RRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR-DVASWTSLISA 363
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA C L+ K+F + S + +N ++ +++N + + +F++M+ +PDN T+
Sbjct: 63 YAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTY 122
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L A + +L+ + IH +++ G + L V + L+ +Y KCG L A +F+ +
Sbjct: 123 PCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIW 182
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
KD++ W++++A Y + + A+ + EM G KP+ T S++ A ++
Sbjct: 183 --KDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS 234
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 190/305 (62%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA+C +Y F + K WN+++SGF + EA+ +F QM ++ ++ T
Sbjct: 631 LYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFT 690
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S + A A +A+++ IH + ++G+ EV++ L+ +Y+KCG++ A F +P
Sbjct: 691 FGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMP 750
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
DK+ I W+++I Y +HG G A+ LF +M Q V PN VTF VL ACSHVGLVDEG
Sbjct: 751 --DKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEG 808
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+S F+ M + H+++P +HY C++DLLGR+G L A + MPI+P+ VW LL AC
Sbjct: 809 ISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACN 868
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+N+++GE AA ELEP+++ Y+L++N+YA G+W ++ R M+ + G++K P +
Sbjct: 869 VHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGR 928
Query: 300 SLVEV 304
S VEV
Sbjct: 929 SWVEV 933
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 17/244 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC+ +++ F+ + WN +L G+ ++ Q+F QM +E + P+ T
Sbjct: 429 LYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFT 488
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ S+L L IH ++++GF + + V+S+L+D+Y+K G L +A IF
Sbjct: 489 YPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFR--R 546
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
LK+ D++ W+A+IA Y +H A++LF EM G+K + + F S + AC+ + +D+G
Sbjct: 547 LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 606
Query: 181 LSLFQFMLKHHIIPLVDHYT-------CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
+ H + Y+ ++ L R G++ +AY + K N W +
Sbjct: 607 RQI-------HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDN-VSWNS 658
Query: 234 LLGA 237
L+
Sbjct: 659 LVSG 662
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 7/238 (2%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNLS ++F S++ +N+++SG A+ LFK+M ++ +PD T SLL
Sbjct: 333 GNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLL 392
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A A + L H Y I++G + V L+D+Y KC + AH F + + ++
Sbjct: 393 SACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF--LACETEN 450
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+++W+ ++ YG+ + + +F +M G+ PNQ T+ S+L C+ +G D G +
Sbjct: 451 VVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHT 510
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV-WGALLGACVSHE 242
+LK V + +ID+ + G+LD A + R + K N V W A++ H+
Sbjct: 511 QVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRL--KENDVVSWTAMIAGYTQHD 566
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 36/270 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + + W A++SG N EA+ LF QM + P F+S+L A +
Sbjct: 239 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVE 298
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ +H +++ GF V + LV +YS+ G+L A IF+ + +D+ + ++++
Sbjct: 299 FFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDR--VSYNSL 356
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I+ + G+ A++LF +M KP+ VT S+L AC+ VG + G + +K +
Sbjct: 357 ISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM 416
Query: 193 I-------PLVDHYTCIIDL------------------------LGRAGRLDDAYNLIRT 221
L+D Y D+ G+ L+ ++ +
Sbjct: 417 TSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQ 476
Query: 222 MPIK---PNHAVWGALLGACVSHENVELGE 248
M I+ PN + ++L C + +LGE
Sbjct: 477 MQIEGIVPNQFTYPSILKTCTTLGATDLGE 506
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + +F + + + WN + + FI L LF++ML ++V+ D F +L
Sbjct: 133 NCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGC 192
Query: 69 AILA-DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
+ A + IH I SGF + + L+D+Y K G L A +F LK +D +
Sbjct: 193 SGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFE--NLKARDSV 250
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W A+I+ ++G+ E A+ LF +M SG+ P F+SVL AC+ V + G L +
Sbjct: 251 SWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLV 310
Query: 188 LKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTM 222
LK + Y C ++ L R+G L A + M
Sbjct: 311 LKQGFSS--ETYVCNALVTLYSRSGNLSSAEQIFHCM 345
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 188/306 (61%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F + KK W + SG+ N + E++ +F+ ML +PD
Sbjct: 324 MYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIA 383
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + L L+QA+ +H ++I++GF + + L+++Y+KC S+ A+ +F
Sbjct: 384 LVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK--G 441
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD++ WS+IIAAYG HG GE A+ LF +M S KPN VTF S+L ACSH GL+ E
Sbjct: 442 MTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKE 501
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+++F M+ K+ + P +HY ++DLLGR G LD A ++I MP++ +WGALLGAC
Sbjct: 502 GINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGAC 561
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+++GEVAA+ F L+P + G YILL+N+Y+ W K+R +V E L K+
Sbjct: 562 RIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVG 621
Query: 299 QSLVEV 304
QS+VE+
Sbjct: 622 QSVVEL 627
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
+Y KC N + K+FM+ K W +++SG+ + A+ F +M+V E V PD
Sbjct: 121 LYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPV 180
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S+ A A L++ K ++H ++ R G +L +A+ L+ +Y K GS+ A ++F
Sbjct: 181 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR-- 238
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ DKDII WS ++A Y +G + LFNEM+ +KPN VT SVL AC+ + ++E
Sbjct: 239 EMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEE 298
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ + + + + T ++D+ + + A +L MP K + W L
Sbjct: 299 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSG 355
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 160/337 (47%), Gaps = 48/337 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + +F + S K W+ +++ + N + + LF +ML + ++P+ T
Sbjct: 223 LYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVT 282
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A +++L++ M IH + GF V++ L+D+Y KC S A +FN +P
Sbjct: 283 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ + + Y +G ++ +F M+ SG +P+ + +L S +G++ +
Sbjct: 343 --KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 400
Query: 181 LSLFQFMLKHHI-------IPLVDHY------------------------TCIIDLLGRA 209
+ L F++K+ L++ Y + II G
Sbjct: 401 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 460
Query: 210 GRLDDAYNLIRTMP----IKPNHAVWGALLGACVSH-----ENVELGEVAARWTFELEPE 260
G+ ++A L M KPN+ + ++L AC SH E + + ++ ++L+P
Sbjct: 461 GQGEEALKLFYQMANHSDTKPNNVTFISILSAC-SHSGLIKEGINMFDIMVN-KYKLKP- 517
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
N+ +Y ++ +L +GR +++ D++N + ++ P
Sbjct: 518 NSEHYAIMVDL---LGRMGELDMALDVINNMPMQAGP 551
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 46/292 (15%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-----LVEDVQPDNATFNSLL 65
++K+F +T + WNA+L + E + LF+QM + + +PDN + + L
Sbjct: 25 AHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIAL 84
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
+ A L L IH +L + + V S L+D+Y+KCG + A +F P D
Sbjct: 85 KSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYP--KPD 142
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++W++II+ Y + G E+A++ F+ MV S V P+ VT SV AC+ + G S+
Sbjct: 143 VVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVH 202
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP--------------------- 223
F+ + + + ++ L G+ G + +A NL R M
Sbjct: 203 GFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAET 262
Query: 224 -------------IKPNHAVWGALLGACVSHENVELG----EVAARWTFELE 258
IKPN ++L AC N+E G E+A + FE+E
Sbjct: 263 DVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEME 314
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 188/306 (61%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F + KK W + SG+ N + E++ +F+ ML +PD
Sbjct: 324 MYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIA 383
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + L L+QA+ +H ++I++GF + + L+++Y+KC S+ A+ +F
Sbjct: 384 LVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK--G 441
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD++ WS+IIAAYG HG GE A+ LF +M S KPN VTF S+L ACSH GL+ E
Sbjct: 442 MTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKE 501
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+++F M+ K+ + P +HY ++DLLGR G LD A ++I MP++ +WGALLGAC
Sbjct: 502 GINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGAC 561
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+++GEVAA+ F L+P + G YILL+N+Y+ W K+R +V E L K+
Sbjct: 562 RIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVG 621
Query: 299 QSLVEV 304
QS+VE+
Sbjct: 622 QSVVEL 627
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
+Y KC N + K+FM+ K W +++SG+ + A+ F +M+V E V PD
Sbjct: 121 LYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPV 180
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S+ A A L++ K ++H ++ R G +L +A+ L+ +Y K GS+ A ++F
Sbjct: 181 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR-- 238
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ DKDII WS ++A Y +G + LFNEM+ +KPN VT SVL AC+ + ++E
Sbjct: 239 EMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEE 298
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ + + + + T ++D+ + + A +L MP K + W L
Sbjct: 299 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSG 355
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 160/337 (47%), Gaps = 48/337 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + +F + S K W+ +++ + N + + LF +ML + ++P+ T
Sbjct: 223 LYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVT 282
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A +++L++ M IH + GF V++ L+D+Y KC S A +FN +P
Sbjct: 283 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ + + Y +G ++ +F M+ SG +P+ + +L S +G++ +
Sbjct: 343 --KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 400
Query: 181 LSLFQFMLKHHI-------IPLVDHY------------------------TCIIDLLGRA 209
+ L F++K+ L++ Y + II G
Sbjct: 401 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 460
Query: 210 GRLDDAYNLIRTMP----IKPNHAVWGALLGACVSH-----ENVELGEVAARWTFELEPE 260
G+ ++A L M KPN+ + ++L AC SH E + + ++ ++L+P
Sbjct: 461 GQGEEALKLFYQMANHSDTKPNNVTFISILSAC-SHSGLIKEGINMFDIMVN-KYKLKP- 517
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
N+ +Y ++ +L +GR +++ D++N + ++ P
Sbjct: 518 NSEHYAIMVDL---LGRMGELDMALDVINNMPMQAGP 551
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 46/292 (15%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-----LVEDVQPDNATFNSLL 65
++K+F +T + WNA+L + E + LF+QM + + +PDN + + L
Sbjct: 25 AHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIAL 84
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
+ A L L IH +L + + V S L+D+Y+KCG + A +F P D
Sbjct: 85 KSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYP--KPD 142
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++W++II+ Y + G E+A++ F+ MV S V P+ VT SV AC+ + G S+
Sbjct: 143 VVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVH 202
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP--------------------- 223
F+ + + + ++ L G+ G + +A NL R M
Sbjct: 203 GFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAET 262
Query: 224 -------------IKPNHAVWGALLGACVSHENVELG----EVAARWTFELE 258
IKPN ++L AC N+E G E+A + FE+E
Sbjct: 263 DVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEME 314
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 188/306 (61%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F + KK W + SG+ N + E++ +F+ ML +PD
Sbjct: 354 MYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIA 413
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + L L+QA+ +H ++I++GF + + L+++Y+KC S+ A+ +F
Sbjct: 414 LVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK--G 471
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD++ WS+IIAAYG HG GE A+ LF +M S KPN VTF S+L ACSH GL+ E
Sbjct: 472 MTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKE 531
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+++F M+ K+ + P +HY ++DLLGR G LD A ++I MP++ +WGALLGAC
Sbjct: 532 GINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGAC 591
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+++GEVAA+ F L+P + G YILL+N+Y+ W K+R +V E L K+
Sbjct: 592 RIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVG 651
Query: 299 QSLVEV 304
QS+VE+
Sbjct: 652 QSVVEL 657
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
+Y KC N + K+FM+ K W +++SG+ + A+ F +M+V E V PD
Sbjct: 151 LYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPV 210
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S+ A A L++ K ++H ++ R G +L +A+ L+ +Y K GS+ A ++F
Sbjct: 211 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR-- 268
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ DKDII WS ++A Y +G + LFNEM+ +KPN VT SVL AC+ + ++E
Sbjct: 269 EMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEE 328
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ + + + + T ++D+ + + A +L MP K + W L
Sbjct: 329 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSG 385
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 160/337 (47%), Gaps = 48/337 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + +F + S K W+ +++ + N + + LF +ML + ++P+ T
Sbjct: 253 LYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVT 312
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A +++L++ M IH + GF V++ L+D+Y KC S A +FN +P
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ + + Y +G ++ +F M+ SG +P+ + +L S +G++ +
Sbjct: 373 --KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430
Query: 181 LSLFQFMLKHHI-------IPLVDHY------------------------TCIIDLLGRA 209
+ L F++K+ L++ Y + II G
Sbjct: 431 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 210 GRLDDAYNLIRTMP----IKPNHAVWGALLGACVSH-----ENVELGEVAARWTFELEPE 260
G+ ++A L M KPN+ + ++L AC SH E + + ++ ++L+P
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSAC-SHSGLIKEGINMFDIMVN-KYKLKP- 547
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
N+ +Y ++ +L +GR +++ D++N + ++ P
Sbjct: 548 NSEHYAIMVDL---LGRMGELDMALDVINNMPMQAGP 581
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 46/302 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-----LVEDVQ 55
+YA+ + ++K+F +T + WNA+L + E + LF+QM + + +
Sbjct: 45 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 104
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
PDN + + L + A L L IH +L + + V S L+D+Y+KCG + A +
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKV 164
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHV 174
F P D+++W++II+ Y + G E+A++ F+ MV S V P+ VT SV AC+ +
Sbjct: 165 FMEYP--KPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP----------- 223
G S+ F+ + + + ++ L G+ G + +A NL R M
Sbjct: 223 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 282
Query: 224 -----------------------IKPNHAVWGALLGACVSHENVELG----EVAARWTFE 256
IKPN ++L AC N+E G E+A + FE
Sbjct: 283 ACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 342
Query: 257 LE 258
+E
Sbjct: 343 ME 344
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 188/306 (61%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F + KK W + SG+ N + E++ +F+ ML +PD
Sbjct: 354 MYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIA 413
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + L L+QA+ +H ++I++GF + + L+++Y+KC S+ A+ +F
Sbjct: 414 LVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK--G 471
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD++ WS+IIAAYG HG GE A+ LF +M S KPN VTF S+L ACSH GL+ E
Sbjct: 472 MTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKE 531
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+++F M+ K+ + P +HY ++DLLGR G LD A ++I MP++ +WGALLGAC
Sbjct: 532 GINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGAC 591
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+++GEVAA+ F L+P + G YILL+N+Y+ W K+R +V E L K+
Sbjct: 592 RIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVG 651
Query: 299 QSLVEV 304
QS+VE+
Sbjct: 652 QSVVEL 657
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
+Y KC N + K+FM+ K W +++SG+ + A+ F +M+V E V PD
Sbjct: 151 LYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPV 210
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S+ A A L++ K ++H ++ R G +L +A+ L+ +Y K GS+ A ++F
Sbjct: 211 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR-- 268
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ DKDII WS ++A Y +G + LFNEM+ +KPN VT SVL AC+ + ++E
Sbjct: 269 EMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEE 328
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ + + + + T ++D+ + + A +L MP K + W L
Sbjct: 329 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSG 385
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 160/337 (47%), Gaps = 48/337 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + +F + S K W+ +++ + N + + LF +ML + ++P+ T
Sbjct: 253 LYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVT 312
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A +++L++ M IH + GF V++ L+D+Y KC S A +FN +P
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ + + Y +G ++ +F M+ SG +P+ + +L S +G++ +
Sbjct: 373 --KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430
Query: 181 LSLFQFMLKHHI-------IPLVDHY------------------------TCIIDLLGRA 209
+ L F++K+ L++ Y + II G
Sbjct: 431 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 210 GRLDDAYNLIRTMP----IKPNHAVWGALLGACVSH-----ENVELGEVAARWTFELEPE 260
G+ ++A L M KPN+ + ++L AC SH E + + ++ ++L+P
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSAC-SHSGLIKEGINMFDIMVN-KYKLKP- 547
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
N+ +Y ++ +L +GR +++ D++N + ++ P
Sbjct: 548 NSEHYAIMVDL---LGRMGELDMALDVINNMPMQAGP 581
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 46/302 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-----LVEDVQ 55
+YA+ + ++K+F +T + WNA+L + E + LF+QM + + +
Sbjct: 45 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 104
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
PDN + + L + A L L IH +L + + V S L+D+Y+KCG + A +
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKV 164
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHV 174
F P D+++W++II+ Y + G E+A++ F+ MV S V P+ VT SV AC+ +
Sbjct: 165 FMEYP--KPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP----------- 223
G S+ F+ + + + ++ L G+ G + +A NL R M
Sbjct: 223 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 282
Query: 224 -----------------------IKPNHAVWGALLGACVSHENVELG----EVAARWTFE 256
IKPN ++L AC N+E G E+A + FE
Sbjct: 283 ACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 342
Query: 257 LE 258
+E
Sbjct: 343 ME 344
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 190/301 (63%), Gaps = 7/301 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK S +F + ++K W+A++SG++ N A EA+++F +M +V PD
Sbjct: 253 YAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVL 312
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
L+ A + L DLK A + Y+ + L + V S LVD+ +KCG++ A +F +P
Sbjct: 313 VGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMP 372
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D++ + ++I + HGHGE AV+LFN M+ G+ P++ FT VL ACSH GL+D+G
Sbjct: 373 --ERDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKG 430
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M +++ I P DH+ C++DLLGR+G+L DAY LI++M I+PN WGAL+GAC
Sbjct: 431 WKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACK 490
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVR--DMVN-EVGLRKL 296
+ ELGE+ A FELEP+N NY+LL+N+YAA GRW+DV VR ++ N E+G+
Sbjct: 491 LQGDTELGEIVANRLFELEPQNAANYVLLSNIYAAAGRWKDVSLVRIQNVQNMEIGMSSC 550
Query: 297 P 297
P
Sbjct: 551 P 551
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + K+F + +++ W A++ G++ +A ++F M + +V A+
Sbjct: 159 MYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDGMPLRNV----AS 214
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+N+++ + + DL A + + + + +VD Y+K G + + +F
Sbjct: 215 WNAMIRGFVKVGDLSSARGVFDSMPEKNVVS----FTTMVDGYAKAGDMESSRFLFE--Q 268
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KD++ WSA+I+ Y ++G A+ +F EM V P++ ++ A S +G +
Sbjct: 269 AAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDLKLA 328
Query: 181 LSLFQFMLKHHIIPLVDHY-TCIIDLLGRAGRLDDAYNLIRTMP 223
+ ++ + I DH + ++D+ + G ++ A L + MP
Sbjct: 329 QRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMP 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 129/290 (44%), Gaps = 15/290 (5%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
S +F + T WN + +S + I F +M E PD+ T+ S++ A +
Sbjct: 68 STAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSG 127
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+ ++H + R G L + + L+D+Y KCG + A +FN L +++++ W+
Sbjct: 128 TCKVLVGKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFN--ELTERNVVSWT 185
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
A++ Y G A +F+ M V ++ +++ VG + +F M +
Sbjct: 186 AMVVGYVTAGDVVKAKKVFDGMPLRNV----ASWNAMIRGFVKVGDLSSARGVFDSMPEK 241
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
+++ +T ++D +AG ++ + L K + W AL+ V +N E E A
Sbjct: 242 NVVS----FTTMVDGYAKAGDMESSRFLFEQAAEK-DVVTWSALISGYV--QNGEANE-A 293
Query: 251 ARWTFELEPENT-GNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ E+E N + +L L +A + D++ + + + VG + Q
Sbjct: 294 LKVFLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQ 343
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 244 bits (624), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 188/304 (61%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC +S +F K S+ WN++++GF NSL ++A+ FK+M P +
Sbjct: 462 VYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFS 521
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++ + A L+ L Q IH +I+ G++ + V S LV++Y KCG +G A + F+++P
Sbjct: 522 FATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMP 581
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K+I+ W+ +I Y +G+G AVSL+ +M+ SG KP+ +TF +VL ACSH LVDEG
Sbjct: 582 --GKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEG 639
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ +F ML K ++P +DHYTCIID LGR GR ++ ++ TMP K + VW +L +C
Sbjct: 640 VEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCR 699
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H NV L + AA L P N+ Y+LLAN+Y+++GRW D + VRD++++ + K P
Sbjct: 700 VHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGY 759
Query: 300 SLVE 303
S E
Sbjct: 760 SRSE 763
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 145/315 (46%), Gaps = 44/315 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F S WNA+LSG+ ++ EA++LF++M + PD T +L + A L
Sbjct: 373 QIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELG 432
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ +H + GF + VAS L+++YSKCG + + H+F+ L + D++ W+++
Sbjct: 433 LLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFS--KLSELDVVCWNSM 490
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
IA + + + A++ F M Q G P++ +F ++ +C+ + + +G + ++K
Sbjct: 491 IAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGY 550
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP----------------------------- 223
+ V + ++++ + G + A MP
Sbjct: 551 VDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKD 610
Query: 224 -----IKPNHAVWGALLGACVSH-----ENVELGEVAARWTFELEPENTGNYILLANLYA 273
KP+ + A+L AC SH E VE+ + FE+ P+ +Y + +
Sbjct: 611 MISSGEKPDDITFVAVLTAC-SHSALVDEGVEIFSSMLQ-KFEVVPK-LDHYTCIIDCLG 667
Query: 274 AVGRWRDVEKVRDMV 288
VGR+ +VE + D +
Sbjct: 668 RVGRFNEVEVILDTM 682
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 135/314 (42%), Gaps = 32/314 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++++F + + ++ G + +E ++LF+ ML + + D+ +
Sbjct: 182 MYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVS 241
Query: 61 FNSLLP------AYAILADLK------QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 108
+++L ++ + D + Q IH ++ GF L + + L+D+Y+K G
Sbjct: 242 LSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGD 301
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+ A ++F L ++ W+ +I+ YG E A+ F M G +P+ VT+ ++L
Sbjct: 302 MDSAENVFE--NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINML 359
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK--- 225
AC G V G +F M +I + I+ ++ +A L R M +
Sbjct: 360 TACVKSGDVKVGRQIFDCMSSPSLIS----WNAILSGYNQSADHGEAVELFRKMQFQWQN 415
Query: 226 PNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNY------ILLANLYAAVGRWR 279
P+ +L +C ELG + A + G Y L N+Y+ G+
Sbjct: 416 PDRTTLAIILSSC-----AELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKME 470
Query: 280 DVEKVRDMVNEVGL 293
+ V ++E+ +
Sbjct: 471 VSKHVFSKLSELDV 484
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 40/193 (20%)
Query: 3 AKCNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
A C NL Y ++F++ ++ T N +++ + N R+A+ + M+V E V+P +
Sbjct: 80 AFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHI 139
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF ++ A L D+ H +++ GF + V++ L+ +Y+KCG A +F I
Sbjct: 140 TFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGI 199
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
V+PN+VTFT+++ S V E
Sbjct: 200 -------------------------------------VEPNEVTFTTMMGGLSQTNQVKE 222
Query: 180 GLSLFQFMLKHHI 192
GL LF+ ML+ I
Sbjct: 223 GLELFRLMLRKGI 235
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 35/217 (16%)
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
+LL + L A IH + R + + L+D+YSKC + AHH+F+ IP
Sbjct: 10 NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIP-- 67
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLF---------------NEMVQSG----------- 156
K+I ++AI++A+ K + + A LF MV++G
Sbjct: 68 HKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDL 127
Query: 157 ------VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAG 210
VKP+ +TF +V AC + V+ G +LK + ++ + + G
Sbjct: 128 MMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCG 187
Query: 211 RLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
+DA+ + + ++PN + ++G V+ G
Sbjct: 188 LNEDAFRVFEGI-VEPNEVTFTTMMGGLSQTNQVKEG 223
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 244 bits (624), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 182/292 (62%), Gaps = 4/292 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
MF ++ WNA++ F L EA+ LF +M E V + + S+L A LA
Sbjct: 291 MFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLAS 350
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L +H L+RS F L VAS+L+ +Y KCG L A IFN KD +++W+++I
Sbjct: 351 LDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKD--VVMWNSMI 408
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKHHI 192
Y +HG GE A+++F++M SGV+P++VTF VL ACS+ G V EG +F+ M + +
Sbjct: 409 TGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQV 468
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P ++HY C++DLLGRAGR+D+A L+ MP++P+ VWGALLGAC +H ++L EVA
Sbjct: 469 EPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVE 528
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+LEP+N G Y+LL+++YA GRWRDVE +R +N + K P S +EV
Sbjct: 529 KLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVI-KFPGCSWIEV 579
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 55/262 (20%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
++ A WNA++S + + R+A+ LF QM Q + +FN ++ Y
Sbjct: 49 QRTIASWNAMVSAYFESHKPRDALLLFDQM----PQRNTVSFNGMISGYV---------- 94
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
K G + A +F+++P +++++ W++++ Y +
Sbjct: 95 -------------------------KNGMVADARKVFDVMP--ERNVVSWTSMVRGYVQE 127
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
G E A LF EM + N V++T ++ +D+ LF + + ++ +
Sbjct: 128 GMVEEAEKLFWEMPRR----NVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVV---- 179
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 259
T +I + GRLD+A L M ++ N W ++ + V++ AR FE+ P
Sbjct: 180 TNMIGGYCQVGRLDEARELFDEMKVR-NVFTWTTMVSGYAKNGRVDV----ARKLFEVMP 234
Query: 260 E-NTGNYILLANLYAAVGRWRD 280
E N ++ + Y GR ++
Sbjct: 235 ERNEVSWTAMLMGYTQSGRMKE 256
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 103 YSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
Y + G + A +F+ PL + I W+A+++AY + A+ LF++M Q N V
Sbjct: 29 YGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR----NTV 84
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+F ++ G+V + +F M + +++ +T ++ + G +++A L M
Sbjct: 85 SFNGMISGYVKNGMVADARKVFDVMPERNVVS----WTSMVRGYVQEGMVEEAEKLFWEM 140
Query: 223 PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANL---YAAVGRWR 279
P + N W ++G + ++ A+ F++ PE + +++ N+ Y VGR
Sbjct: 141 P-RRNVVSWTVMIGGLLKESRID----DAKKLFDMIPEK--DVVVVTNMIGGYCQVGR-- 191
Query: 280 DVEKVRDMVNEVGLRKL 296
+++ R++ +E+ +R +
Sbjct: 192 -LDEARELFDEMKVRNV 207
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F ++ W +++ G++ + EA +LF +M +V LL I
Sbjct: 104 KVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRI-D 162
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
D K+ + +I + V + ++ Y + G L A +F+ +K +++ W+ +
Sbjct: 163 DAKKLFD----MIPEKDVV---VVTNMIGGYCQVGRLDEARELFD--EMKVRNVFTWTTM 213
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
++ Y K+G ++A LF M + N+V++T++L + G + E LF+ M I
Sbjct: 214 VSGYAKNGRVDVARKLFEVMPER----NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWI 269
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + +I G AG + A + M + + W A++
Sbjct: 270 VACNE----MILQFGLAGEMHRARMMFEGMKER-DEGTWNAMI 307
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 186/304 (61%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC ++YK+F +K W +++ GF+ + +EA+ L +QMLV ++PD T
Sbjct: 187 YIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITL 246
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ L A A L L+Q IH Y+ ++ + L+D+Y KCG + A +F+ L
Sbjct: 247 SCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFS--KL 304
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ K + W+AII + HG G A+ F +M ++G+KP TFT+VL ACSH GLV+EG
Sbjct: 305 EKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGK 364
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
SLF+ M +++ P+++HY C++DLLGRAG L +A + +MPIKPN A+WG+LL AC
Sbjct: 365 SLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHL 424
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+++ELG+ ++ EL+PE+ G YI LA+++AA G W + +VR + GL LP S
Sbjct: 425 HKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCS 484
Query: 301 LVEV 304
+ +
Sbjct: 485 TITL 488
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 138/290 (47%), Gaps = 39/290 (13%)
Query: 2 YAKCNCGNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
YA NL+Y +F + S T WN ++ + +++ EA+ L+ QML + +
Sbjct: 53 YASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAY 112
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF LL A + L+ L + IH +I+ GF + + L+ +Y+ GS+ AH +F+++
Sbjct: 113 TFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLL 172
Query: 120 PLKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFN 150
P +D K++I W+++I + + G + A+ L
Sbjct: 173 PSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQ 232
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII--PLVDHYTCIIDLLGR 208
+M+ +G+KP+++T + L AC+ +G +++G + ++ K+ I P++ +ID+ +
Sbjct: 233 QMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLG--CALIDMYVK 290
Query: 209 AGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
G + A + + K + W A++G H G A W +++
Sbjct: 291 CGEMKKALLVFSKLEKKCVY-TWTAIIGGFAVHGK---GSEALDWFTQMQ 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F K KK W A++ GF + EA+ F QM ++P + T
Sbjct: 287 MYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFT 346
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYR---LEVASILVDIYSKCGSLGYAHHIFN 117
F ++L A + +++ ++ + S F +E +VD+ + G L A
Sbjct: 347 FTAVLTACSHTGLVEEGKSL--FESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVE 404
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P+K + IW +++ A H H E+
Sbjct: 405 SMPIKP-NAAIWGSLLNACHLHKHLELG 431
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 244 bits (622), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 183/305 (60%), Gaps = 2/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MY KC K+F + K WNA++SG+ N AR ++++++M V V PD
Sbjct: 205 MYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPV 264
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +L + A L + + R GF + + L+++Y++CG+L A +F+ +
Sbjct: 265 TLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCM 324
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ K ++ W+AII YG HG GE AV LF+ MV+SGVKP++ F SVL ACSH GL ++
Sbjct: 325 DERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAGLTEK 384
Query: 180 GLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GL F M K+ + P +HY+C++DLLGR+GRL +A +LI M +KP+ VWGALLGAC
Sbjct: 385 GLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLIDLMKVKPDGPVWGALLGAC 444
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H NVEL EVA + ELEP N G Y+LL+NLY+ V KVR M+ + LRK P
Sbjct: 445 KIHRNVELAEVAFQHVIELEPTNIGYYVLLSNLYSDTKNLEGVLKVRVMMRDRNLRKDPG 504
Query: 299 QSLVE 303
S VE
Sbjct: 505 CSYVE 509
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 151/310 (48%), Gaps = 23/310 (7%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MY+K + L+ K+F ++ T +NA++SG+ +N + EAI+LF++ML E+ ++
Sbjct: 103 MYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSV 162
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T L+ + L+ +H + GF L V + + +Y KCG + Y +F+ I
Sbjct: 163 TMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEI 222
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGL-- 176
+ KD+I W+A+I+ Y ++GH + ++ EM + GV P+ VT VL +C+++G
Sbjct: 223 LV--KDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQG 280
Query: 177 ----VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV-W 231
V++ + F F ++ +I++ R G L A + M + V W
Sbjct: 281 IGREVEKEIDRFGFRSNSFLM------NALINMYARCGNLVRAREVFDCMDERSKSVVSW 334
Query: 232 GALLGACVSHEN----VELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDM 287
A++G H VEL +V R ++P+ T +L+ A + +E +M
Sbjct: 335 TAIIGGYGIHGEGETAVELFDVMVRSG--VKPDRTVFVSVLSACSHAGLTEKGLEYFDEM 392
Query: 288 VNEVGLRKLP 297
+ GL+ P
Sbjct: 393 ERKYGLQPGP 402
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 189/306 (61%), Gaps = 3/306 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MY++ N LS ++F + + W A+++G++ N A+ LF++M +D ++P+
Sbjct: 281 MYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRV 340
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ S+LPA +L L +H + I+ F + + + L+D+Y+KCGSL YA +F+
Sbjct: 341 SLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNG 400
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
KD I WS+II+AYG HG G+ A++ + EM+Q G+KP+ +T VL AC GLVDE
Sbjct: 401 SYS-KDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDE 459
Query: 180 GLSLF-QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+S++ ++ + P V+ C++DLLGR+G+LD A + IR MPI P +VWG+LL A
Sbjct: 460 GISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTAS 519
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
V H N ++A R ELEPEN NYI L+N YA+ RW ++ +VR M+ E GLRK+P
Sbjct: 520 VIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPG 579
Query: 299 QSLVEV 304
S + +
Sbjct: 580 ISWITI 585
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 15/249 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGF-----IHNSLAREAIQLFKQMLVEDVQ 55
MY +C + K+F + ++ +N ++SG + SL + F++M +
Sbjct: 170 MYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYN 229
Query: 56 PDNATFNSLLPAYAIL-ADLKQAMNIHCYLIRSGFLYRL----EVASILVDIYSKCGSLG 110
D T SLLP +HCYL+++G ++ + S L+D+YS+ L
Sbjct: 230 ADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLV 289
Query: 111 YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLH 169
+ +F+ +K ++I +W+A+I Y ++G E A+ LF EM + ++PN+V+ SVL
Sbjct: 290 LSRRVFD--QMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLP 347
Query: 170 ACS-HVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
AC VGL+ G + F +K + +ID+ + G LD A + +
Sbjct: 348 ACGLLVGLMG-GKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDA 406
Query: 229 AVWGALLGA 237
W +++ A
Sbjct: 407 ITWSSIISA 415
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 14/250 (5%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA +S +F K WN++++G++ N AI LF+QM + PD+ T
Sbjct: 71 YATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM-GRCLLPDDYTL 129
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++ + DL IH +R GF+ + V + ++ +Y +C G A +F+ +P
Sbjct: 130 ATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMP- 188
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAV-----SLFNEMVQSGVKPNQVTFTSVL-HACSHVG 175
+++ ++ II+ G+ + ++ + F M G + T S+L C G
Sbjct: 189 -QRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDG 247
Query: 176 LVDEGLSLFQFMLKH----HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
D G L +++K+ + V + +ID+ R+ +L + + M + N VW
Sbjct: 248 KFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSR-NIYVW 306
Query: 232 GALLGACVSH 241
A++ V +
Sbjct: 307 TAMINGYVQN 316
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 189/298 (63%), Gaps = 7/298 (2%)
Query: 12 YKMFMKTSKK----RTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPA 67
+ +F+K S+ A WNAV+ G + N + EA+++F++M +P+ T +S+LPA
Sbjct: 265 FSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPA 324
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
+ +L+ IHCY+ R + L + L+ +Y+KCG L + ++F++ ++ KD++
Sbjct: 325 CSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM--MRRKDVV 382
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+ +I A HG+G+ A+ LF++M+ S V+PN VTFT VL CSH LV+EG+ +F M
Sbjct: 383 AWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSM 442
Query: 188 LKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
+ H++ P +HY+C++D+ RAGRL++AY I+ MP++P + WGALL AC ++NVEL
Sbjct: 443 GRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVEL 502
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+++A+ FE+EP N GNY+ L N+ W + +VR ++ E G+ K P S ++V
Sbjct: 503 AKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQV 560
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 34/247 (13%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC C + ++F + W ++ S ++ R+ + +F++M V+P+ T
Sbjct: 123 YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTV 182
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S+LPA A L DLK IH + +R G + L V S LV +Y+KC S+ A +F+++P
Sbjct: 183 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP- 241
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+D++ W+ ++ AY K+ E SLF +M + GV+ ++ T+ +V+ C G +E +
Sbjct: 242 -HRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 300
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+F+ M K M KPN ++L AC
Sbjct: 301 EMFRKMQK--------------------------------MGFKPNEITISSILPACSFS 328
Query: 242 ENVELGE 248
EN+ +G+
Sbjct: 329 ENLRMGK 335
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 117/241 (48%), Gaps = 7/241 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + ++F + + ++S + L+ EAI+++ + ++PD F + A
Sbjct: 29 NRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKAC 88
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
A+ D + +H R G + + V + L+ Y KC + A +F+ + ++D ++
Sbjct: 89 AVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRD--VVS 146
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+++ + Y K G + +F EM SGVKPN +T +S+L AC+ + + G + F +
Sbjct: 147 WTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAV 206
Query: 189 KHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
+H ++ V+ + C ++ L + + +A + MP + + W +L A ++ E
Sbjct: 207 RHGMV--VNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTAYFKNKEYEK 263
Query: 247 G 247
G
Sbjct: 264 G 264
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC NLS +F +K WN ++ + +EA+ LF +ML+ VQP++ T
Sbjct: 359 MYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 418
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L + +++ + I + R + S +VDIYS+ G L A+ +
Sbjct: 419 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 478
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P+ + W A++AA + + E+A
Sbjct: 479 PM-EPTASAWGALLAACRVYKNVELA 503
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 192/298 (64%), Gaps = 7/298 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + K T W A++SGF+ N EA+++F QM+ E V P TF S+L A A A
Sbjct: 232 KVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEA 291
Query: 73 DLKQAMNIHCYLIR---SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
+ + +HC +IR S L+ + V + L+D+Y+KCG + A ++F ++ + KD++ W
Sbjct: 292 LIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMM-IHVKDVVSW 350
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+ +I + ++G GE ++++F+ M++S ++PN VTF VL AC+H GLV+ GL L M +
Sbjct: 351 NTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMER 410
Query: 190 HH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK-PNH-AVWGALLGACVSHENVEL 246
+ + P +HY +IDLLGR RL++A LI +P + NH A+WGA+LG C H N+EL
Sbjct: 411 RYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLEL 470
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
AA F LEPENTG Y++L+N+YAA GRW D ++R+++ E GL+K PA S +E+
Sbjct: 471 ARKAAEALFALEPENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIEL 528
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 69/302 (22%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVL------------------------------ 30
+Y+KC C +K F K T WN +L
Sbjct: 55 LYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSL 114
Query: 31 -SGFIHNSLAREAIQLFKQML--VEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRS 87
SG + +EA++ F++M V + D T SL+ + L +K +H
Sbjct: 115 ISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIV 174
Query: 88 GFLYRLEVASILVDIYSKCGS-------------------------------LGYAHHIF 116
GF L + + L+D Y KCG + A +F
Sbjct: 175 GFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVF 234
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
N +P+ K + W+A+I+ + K+G A+ +F++M++ GV P TF SVL AC+ L
Sbjct: 235 NEMPV--KYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEAL 292
Query: 177 VDEGLSLF-QFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
+ G + Q + L + Y ++D+ + G + A NL M + W
Sbjct: 293 IGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNT 352
Query: 234 LL 235
L+
Sbjct: 353 LI 354
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 50/282 (17%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+SL+ LK +H LI++ + +A+ L+D+YSKCG H F+ +P
Sbjct: 14 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 73
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K W+ +++ Y K G A LF+EM Q N V++ S++ + E
Sbjct: 74 --NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQR----NLVSYNSLISGLTRHEFHKEA 127
Query: 181 LSLFQFML---------KHHIIPLVDHYTC----------------------------II 203
+ F+ M + ++ LV + +C +I
Sbjct: 128 VKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALI 187
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
D G+ G + ++ L R+M ++ + W +++ V++ + A + E+ + T
Sbjct: 188 DAYGKCGEPNSSFCLFRSM-VEKDAVSWTSMV---VTYTRASRIDDACKVFNEMPVKYTV 243
Query: 264 NYILLANLYAAVGR-WRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++ L + + GR + +E M+ E L + AQ+ V V
Sbjct: 244 SWAALISGFVKNGRCYEALEVFHQMIKEGVLPR--AQTFVSV 283
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 179/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC N + +F + + K W ++ + +E LF+ ++ V+P+ T
Sbjct: 240 LYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYT 299
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L A A LA + +H Y+ R G+ AS LV +YSKCG+ A +FN +P
Sbjct: 300 FAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP 359
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D ++ W+++I Y ++G +MA+ F +++SG KP+++TF VL AC+H GLVD G
Sbjct: 360 RPD--LVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIG 417
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F + KH ++ DHY C+IDLL R+GR +A N+I MP+KP+ +W +LLG C
Sbjct: 418 LEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCR 477
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N+EL E AA+ FELEPEN YI L+N+YA G W + KVR+ ++ G+ K P +
Sbjct: 478 IHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGK 537
Query: 300 SLVEV 304
S +E+
Sbjct: 538 SWIEI 542
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 117/224 (52%), Gaps = 4/224 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA-TFNSLLPAYAIL 71
K+F + + WNAV+SG++ EA+ LF+ M + N T +S L A A +
Sbjct: 150 KLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAI 209
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+ L++ IH YLIRSG V + L+D+Y KCGSL A IF+ + DKDI+ W+
Sbjct: 210 SSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFD--QMADKDIVSWTT 267
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I + G + SLF +++ SGV+PN+ TF VL+AC+ + G + +M +
Sbjct: 268 MIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVG 327
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
P + ++ + + G + A + MP +P+ W +L+
Sbjct: 328 YDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLI 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQM--LVEDV-------QPDNATFNSLLPAYAILADLK 75
P + LS + E I+LF Q L E V QP +++L+ A L+
Sbjct: 21 PKDTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLE 80
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
+H + S F+ + +++ L+ +Y+KCGSL A +F+ IP KD+ W+ +I+
Sbjct: 81 LGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIP--QKDLCSWNTMISG 138
Query: 136 YGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
Y G E A LF+EM + ++ +V+ G E L LF+ M
Sbjct: 139 YANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWYMEALDLFRMM 186
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 184/305 (60%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + +Y +F K +K W ++++G+ N+ E++++F M V V PD
Sbjct: 379 MYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFI 438
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A L L+ +H I+SG + V + LV +Y+KCG L A IF +
Sbjct: 439 VASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIF--VS 496
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ KD+I W+AII Y ++G G ++ ++ MV SG +P+ +TF +L ACSH GLVDEG
Sbjct: 497 MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEG 556
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
FQ M K + I P +HY C+IDL GR+G+LD+A L+ M +KP+ VW +LL AC
Sbjct: 557 RKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACR 616
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
HEN+EL E AA FELEP N Y++L+N+Y+A +W DV K+R ++ G+ K P
Sbjct: 617 VHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGC 676
Query: 300 SLVEV 304
S +E+
Sbjct: 677 SWLEI 681
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 124/235 (52%), Gaps = 5/235 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + M WN+++ GF+ + L EA++LFK M +++ D+ T
Sbjct: 280 MYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYT 339
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L + + ++H +I++GF V++ LVD+Y+K G + A+ +F
Sbjct: 340 FPSVLNCCVVGS--INPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFE--K 395
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +KD+I W++++ Y ++ E ++ +F +M +GV P+Q S+L AC+ + L++ G
Sbjct: 396 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFG 455
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ +K + Y ++ + + G LDDA + +M +K + W A++
Sbjct: 456 KQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAII 509
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 125/237 (52%), Gaps = 7/237 (2%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYAKC C + + +F ++ +K W A+++G+ N +A++ F+ M + V+ +
Sbjct: 177 MYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQ 236
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF ++L A + + +H ++++SGF + V S LVD+Y+KCG L A ++
Sbjct: 237 YTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLET 296
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
++D D++ W++++ + +HG E A+ LF M +K + TF SVL+ C VG ++
Sbjct: 297 --MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN 353
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
S+ ++K ++D+ + G +D AY + M ++ + W +L+
Sbjct: 354 PK-SVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLV 408
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 121/238 (50%), Gaps = 3/238 (1%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
N G L + ++F S K + W++++SG+ EA LF+ M +E + T S
Sbjct: 79 NVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGS 138
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L + L ++ IH +++++GF + V + LVD+Y+KC + A +F +
Sbjct: 139 VLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDR 198
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
K+ ++W+A++ Y ++G G AV F M GV+ NQ TF ++L ACS V G +
Sbjct: 199 KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQV 258
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
F++K V + ++D+ + G L +A N++ TM + W +L+ V H
Sbjct: 259 HGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRH 315
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 194/304 (63%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC+ + + K+F + + + + ++++ + + A EA++L+ QM V D++PD
Sbjct: 432 YGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVC 491
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+SLL A A L+ +Q +H + I+ GF+ + ++ LV++Y+KCGS+ A F+ IP
Sbjct: 492 SSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIP- 550
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ I+ WSA+I +HGHG+ A+ +FN+M++ V PN +T SVL AC+H GLV+EG
Sbjct: 551 -QRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGK 609
Query: 182 SLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F+ M K I P +H+ C+IDLLGR+G+L++A L+ ++P + + +VWGALLGA
Sbjct: 610 QYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARI 669
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+NVELGE AA F LEP+ +G +LLAN+YA+ G W +V VR ++ ++K P S
Sbjct: 670 HKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMS 729
Query: 301 LVEV 304
+EV
Sbjct: 730 WIEV 733
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 18 TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQA 77
T + W+A++S ++ N +EA+ F +M V+ + TF ++L A +I DL
Sbjct: 43 TEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMG 102
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
+H + SGF V++ LV +Y+KCG + +F +I + ++ W+A+ + +
Sbjct: 103 KKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMIL--EPGVVSWNALFSCHV 160
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD 197
+ V LF MV+ V+PN+ + + +L+AC+ GL D G+ L + +D
Sbjct: 161 QSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACA--GLRDGGIGRTVHGLLMKLGHGLD 218
Query: 198 HYT--CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
++ ++D+ +AGR++DA ++ R M I P+ W A++ CV HE +L
Sbjct: 219 QFSANALVDMYAKAGRIEDAVDVFREM-IHPDTVSWNAIIAGCVLHEYNDLA 269
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 10/290 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + S K+F + WNA+ S + + E + LFK+M+ V+P+ +
Sbjct: 127 MYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYS 186
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L A A L D +H L++ G A+ LVD+Y+K G + A +F
Sbjct: 187 LSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFR--E 244
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D + W+AIIA H + ++A+ L NEM +SG PN T +S L AC+ +GL D G
Sbjct: 245 MIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLG 304
Query: 181 LSLFQFMLKHHIIPLVDHYTCI--IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+ +K I D + + IDL + +DDA MP K +H + G L +
Sbjct: 305 RQIHSCSVK--IDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTK-DHIIAGNALISG 361
Query: 239 VSHENVELGEVAARWTFELEPENTG-NYILLANLYAAVGRWRDVEKVRDM 287
S + E A FEL EN N L+ + +V + ++ + +
Sbjct: 362 YSQCGDD--EQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQI 409
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 1 MYAKCNCGNLSYKMF-MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
+Y+KC + + + + + +K NA++SG+ +AI LF ++ E++ +
Sbjct: 329 LYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQT 388
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +++L + A L +K IH I+ G V + L+D Y KC + A IF
Sbjct: 389 TLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFE-- 446
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+D++ ++++I AY +HG E A+ L+ +M + +KP+ +S+L+AC+++ ++
Sbjct: 447 ERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQ 506
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G L +K + + ++++ + G ++DA +P + W A++G
Sbjct: 507 GKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIP-QRGIVSWSAMIGGLA 565
Query: 240 SH 241
H
Sbjct: 566 QH 567
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 16/172 (9%)
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
M +H +LI+ GF + + L+ YS GYA ++ + + + ++ WSA+I+ Y
Sbjct: 1 MELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLD-QSTEPRTVVSWSALISRYV 59
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD 197
++G + A+ FNEM GVK N+ TF +VL ACS + + L++ + K H + +V
Sbjct: 60 QNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACS----IKKDLNMGK---KVHAMTVVS 112
Query: 198 HY-------TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
+ ++ + + G+ D+ L M ++P W AL V +
Sbjct: 113 GFESDAFVSNTLVVMYAKCGQFSDSKKLF-GMILEPGVVSWNALFSCHVQSD 163
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + F + ++ W+A++ G + +EA+ +F QML + V P++ T
Sbjct: 532 MYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHIT 591
Query: 61 FNSLLPA---YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
S+L A ++ + KQ + G E + ++D+ + G L A + N
Sbjct: 592 LVSVLCACNHAGLVNEGKQYFET--MEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVN 649
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
IP + D +W A++ A H + E+
Sbjct: 650 SIPF-EADGSVWGALLGAARIHKNVELG 676
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 187/306 (61%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
YAKC ++ F MKT K WNA++SG+ N A EA++LF+ M+ +++PD+
Sbjct: 290 FYAKCGEVTVAKSFFDKMKTPNK-VMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDS 348
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T S + A A + LK A + Y+ +S + + V + L+D+Y+KCGS+ A +F+
Sbjct: 349 ITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDR 408
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+KD +++WSA+I YG HG G A+ L++ M Q GV PN VTF +L ACSH GL+
Sbjct: 409 ASVKD--VVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIK 466
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+G LF M I P +HY+C++DLLGRAG L AY I MPI+P +VWGALL AC
Sbjct: 467 QGWELFHCMRDFGIKPRNEHYSCVVDLLGRAGYLKQAYVFILKMPIEPGVSVWGALLSAC 526
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H V LGE AA+ F L+P NTG+Y+ L+NLYA+ W V +R ++ E GL K
Sbjct: 527 KIHRCVTLGEYAAQKLFSLDPYNTGHYVQLSNLYASSRMWDRVAYIRVLMKEKGLTKYLG 586
Query: 299 QSLVEV 304
S++++
Sbjct: 587 YSVIDI 592
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 124/235 (52%), Gaps = 2/235 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC ++ +F + + W A++SG+ N EA+++F QM DV+PD +
Sbjct: 189 LYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWIS 248
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ AY + DL+Q ++H +I+ G ++ L Y+KCG + A F+ +
Sbjct: 249 LVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMK 308
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K +++W+A+I+ Y K+GH E AV LF M+ +KP+ +T S + AC+ VG +
Sbjct: 309 TPNK-VMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLA 367
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ ++ K + T +ID+ + G ++ A + +K + +W A++
Sbjct: 368 QWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVK-DVVMWSAMI 421
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 123/242 (50%), Gaps = 4/242 (1%)
Query: 6 NCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
N G + Y K+F + WNA++ + N++ R I++++ M + PD TF
Sbjct: 91 NLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPC 150
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L A + L D + +H ++I GF + V + LV +Y+KCG +G A +F+ L D
Sbjct: 151 VLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFD--RLYD 208
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
+ I+ W+AI++ YG++G A+ +F++M ++ VKP+ ++ SV+ A + V +++G SL
Sbjct: 209 RTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSL 268
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
++K + D + + G + A + M +W A++ + +
Sbjct: 269 HGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGH 328
Query: 244 VE 245
E
Sbjct: 329 AE 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 68 YAILAD----LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
YA L D + +H L+ SG + + + LV+ S G + YA +F+ P D
Sbjct: 50 YASLIDNSTHITHLYQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFP--D 107
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
D+ +W+AII Y ++ + ++ M G+ P++ TF VL ACS L+D GLS
Sbjct: 108 PDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSE--LLDFGLS 164
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 194/304 (63%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC+ + + K+F + + + + ++++ + + A EA++L+ QM V D++PD
Sbjct: 432 YGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVC 491
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+SLL A A L+ +Q +H + I+ GF+ + ++ LV++Y+KCGS+ A F+ IP
Sbjct: 492 SSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIP- 550
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ I+ WSA+I +HGHG+ A+ +FN+M++ V PN +T SVL AC+H GLV+EG
Sbjct: 551 -QRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGK 609
Query: 182 SLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F+ M K I P +H+ C+IDLLGR+G+L++A L+ ++P + + +VWGALLGA
Sbjct: 610 QYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARI 669
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+NVELGE AA F LEP+ +G +LLAN+YA+ G W +V VR ++ ++K P S
Sbjct: 670 HKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMS 729
Query: 301 LVEV 304
+EV
Sbjct: 730 WIEV 733
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 18 TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQA 77
T + W+A++S ++ N +EA+ F +M V+ + TF ++L A +I DL
Sbjct: 43 TEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMG 102
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
+H + SGF V++ LV +Y+KCG + +F +I + ++ W+A+ + +
Sbjct: 103 KKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMI--LEPGVVSWNALFSCHV 160
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD 197
+ V LF MV+ V+PN+ + + +L+AC+ GL D G+ L + +D
Sbjct: 161 QSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACA--GLRDGGIGRTVHGLLMKLGHGLD 218
Query: 198 HYT--CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
++ ++D+ +AGR++DA ++ R M I P+ W A++ CV HE +L
Sbjct: 219 QFSANALVDMYAKAGRIEDAVDVFREM-IHPDTVSWNAIIAGCVLHEYNDLA 269
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 10/290 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + S K+F + WNA+ S + + E + LFK+M+ V+P+ +
Sbjct: 127 MYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYS 186
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L A A L D +H L++ G A+ LVD+Y+K G + A +F
Sbjct: 187 LSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFR--E 244
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D + W+AIIA H + ++A+ L NEM +SG PN T +S L AC+ +GL D G
Sbjct: 245 MIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLG 304
Query: 181 LSLFQFMLKHHIIPLVDHYTCI--IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+ +K I D + + IDL + +DDA MP K +H + G L +
Sbjct: 305 RQIHSCSVK--IDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTK-DHIIAGNALISG 361
Query: 239 VSHENVELGEVAARWTFELEPENTG-NYILLANLYAAVGRWRDVEKVRDM 287
S + E A FEL EN N L+ + +V + ++ + +
Sbjct: 362 YSQCGDD--EQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQI 409
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 1 MYAKCNCGNLSYKMF-MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
+Y+KC + + + + + +K NA++SG+ +AI LF ++ E++ +
Sbjct: 329 LYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQT 388
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +++L + A L +K IH I+ G V + L+D Y KC + A IF
Sbjct: 389 TLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEER 448
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+D++ ++++I AY +HG E A+ L+ +M + +KP+ +S+L+AC+++ ++
Sbjct: 449 TW--EDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQ 506
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G L +K + + ++++ + G ++DA +P + W A++G
Sbjct: 507 GKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQR-GIVSWSAMIGGLA 565
Query: 240 SH 241
H
Sbjct: 566 QH 567
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 16/172 (9%)
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
M +H +LI+ GF + + L+ YS GYA ++ + + + ++ WSA+I+ Y
Sbjct: 1 MELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLD-QSTEPRTVVSWSALISRYV 59
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD 197
++G + A+ FNEM GVK N+ TF +VL ACS + + L++ + K H + +V
Sbjct: 60 QNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACS----IKKDLNMGK---KVHAMTVVS 112
Query: 198 HY-------TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
+ ++ + + G+ D+ L M ++P W AL V +
Sbjct: 113 GFESDAFVSNTLVVMYAKCGQFSDSKKLF-GMILEPGVVSWNALFSCHVQSD 163
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + F + ++ W+A++ G + +EA+ +F QML + V P++ T
Sbjct: 532 MYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHIT 591
Query: 61 FNSLLPA---YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
S+L A ++ + KQ + G E + ++D+ + G L A + N
Sbjct: 592 LVSVLCACNHAGLVNEGKQYFET--MEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVN 649
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
IP + D +W A++ A H + E+
Sbjct: 650 SIPF-EADGSVWGALLGAARIHKNVELG 676
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 241 bits (614), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 183/306 (59%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + F + KK W + SG+ N + E++ +F+ ML +PD
Sbjct: 262 MYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIA 321
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + L L+QA+ H ++I++GF + + L+++Y+KC S+ A+ +F
Sbjct: 322 LVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK--G 379
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD++ WS+IIAAYG HG GE A+ F +M S KPN VTF S+L ACSH GL+ E
Sbjct: 380 MTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKE 439
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+++F M+ K+ + P +HY ++DLLGR G LD A +LI MP++ +WGALLGAC
Sbjct: 440 GINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGAC 499
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+++GEVAA+ F L+ + G YILL+N+Y W K+R +V E L K+
Sbjct: 500 RIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVG 559
Query: 299 QSLVEV 304
QS+VE+
Sbjct: 560 QSVVEL 565
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
+Y KC N + ++FM+ K W +++SG+ + A+ F +M+V E V PD
Sbjct: 59 LYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPV 118
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S+ A A L++ K ++H ++ R G +L +A+ L+ +Y K GS+ A ++F
Sbjct: 119 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR-- 176
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ DKDII WS + A Y +G + LF EM+ +KPN VT SVL AC+ + ++E
Sbjct: 177 EMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEE 236
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ + + + + T ++D+ + + A + MP K + W L
Sbjct: 237 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSG 293
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 157/337 (46%), Gaps = 48/337 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + +F + S K W+ + + + N + + LF +ML + ++P+ T
Sbjct: 161 LYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVT 220
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A +++L++ M IH + GF V++ L+D+Y KC S A FN +P
Sbjct: 221 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 280
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ + + Y +G ++ +F M+ SG +P+ + +L S +G++ +
Sbjct: 281 --KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 338
Query: 181 LSLFQFMLKHHI-------IPLVDHY------------------------TCIIDLLGRA 209
+ F++K+ L++ Y + II G
Sbjct: 339 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 398
Query: 210 GRLDDA----YNLIRTMPIKPNHAVWGALLGACVSH-----ENVELGEVAARWTFELEPE 260
G+ ++A Y + KPN+ + ++L AC SH E + + ++ ++L+P
Sbjct: 399 GQGEEALKFFYQMANHSDTKPNNVTFISILSAC-SHSGLIKEGINMFDIMVN-KYKLKP- 455
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
N+ +Y ++ +L +GR +++ D++N + ++ P
Sbjct: 456 NSEHYAIMVDL---LGRMGELDMALDLINNMPMQAGP 489
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 41/243 (16%)
Query: 55 QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
+PDN + + L + A L L IH +L + + V S L+D+Y+KCG + A
Sbjct: 12 KPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVE 71
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSH 173
+F P D+++W++I++ Y + G E+A++ F+ MV S V P+ VT SV AC+
Sbjct: 72 VFMEYP--KPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQ 129
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---------- 223
+ G S+ F+ + + + ++ L G+ G + +A NL R M
Sbjct: 130 LSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM 189
Query: 224 ------------------------IKPNHAVWGALLGACVSHENVELG----EVAARWTF 255
IKPN ++L AC N+E G E+A + F
Sbjct: 190 FACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGF 249
Query: 256 ELE 258
E+E
Sbjct: 250 EME 252
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 241 bits (614), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 190/305 (62%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C + ++F K + WN++L+ + N E+I L ++M V+P AT
Sbjct: 192 MYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEAT 251
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++ + A +A L IH + R GF +V + L+D+Y+KCGS+ A +F
Sbjct: 252 LVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFE--R 309
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L++K ++ W+AII Y HG A+ LF++M + +P+ +TF VL ACS L+DEG
Sbjct: 310 LREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEG 368
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+L+ M++ + I P V HYTC+IDLLG G+LD+AY+LIR M +KP+ VWGALL +C
Sbjct: 369 RALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCK 428
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H NVEL E+A ELEP+++GNY++LAN+YA G+W VEK+R ++ + ++K A
Sbjct: 429 IHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIAC 488
Query: 300 SLVEV 304
S +EV
Sbjct: 489 SWIEV 493
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 146/289 (50%), Gaps = 6/289 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA N + +F K K+ WN ++ G+ N AI L+ +ML ++PDN T
Sbjct: 91 LYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFT 150
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A + L+ + + +IH Y+I+SG+ L V + L+D+Y+KCG + A +F+ I
Sbjct: 151 LPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIV 210
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D ++W++++AAY ++GH + ++SL EM +GV+P + T +V+ + + V + G
Sbjct: 211 VRDA--VLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYG 268
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ F +H T +ID+ + G + A L + K W A++
Sbjct: 269 REIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREK-RVVSWNAIITGYAM 327
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVN 289
H L A ++ E+ ++I + AA R R +++ R + N
Sbjct: 328 H---GLAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYN 373
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/306 (40%), Positives = 186/306 (60%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKCN S + F +K WN++++G + N + F++ML E+V+P +
Sbjct: 271 MYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVS 330
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+S++PA A L L +H ++R GF +AS LVD+Y+KCG++ A ++F+ I
Sbjct: 331 FSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRI- 389
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D++ W+AII HGH AVSLF M++ GV+P V F +VL ACSH GLVDEG
Sbjct: 390 -DKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEG 448
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP-IKPNHAVWGALLGAC 238
F M + I P ++HY + DLLGRAGRL++AY+ I M ++P +VW LL AC
Sbjct: 449 WRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAAC 508
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
+H++VEL E ++ EN G Y+L++N+Y+A RW+D ++R + + GL+K PA
Sbjct: 509 RAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPA 568
Query: 299 QSLVEV 304
S +EV
Sbjct: 569 CSWIEV 574
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 119/230 (51%), Gaps = 4/230 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAIL 71
K+F + WN V++GF N + EA+ + ++M ++PD+ T +S+LP +A
Sbjct: 181 KVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEH 240
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
D+ + IH Y +R+GF + + S L+D+Y+KC L + F I+P KD I W++
Sbjct: 241 VDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDA--ISWNS 298
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
IIA ++G + + F M++ VKP V+F+SV+ AC+H+ + G L +++
Sbjct: 299 IIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLG 358
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ ++D+ + G + A + + K + W A++ C H
Sbjct: 359 FDDNEFIASSLVDMYAKCGNIKMARYVFDRID-KRDMVAWTAIIMGCAMH 407
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 113/238 (47%), Gaps = 19/238 (7%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W++++ + +SL + F M V P+ F SLL A +L K A ++H +
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGY---------------AHHIFNIIPLKDKDIIIWS 130
R G L +A+ L++ Y+K + G +F+++P+ +D++ W+
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPV--RDVVSWN 195
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+IA + ++G A+ + EM ++G +KP+ T +S+L + V++G + + ++
Sbjct: 196 TVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVR 255
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
+ V + +ID+ + RL+ + +P K + W +++ CV + + G
Sbjct: 256 NGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRK-DAISWNSIIAGCVQNGEFDRG 312
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 183/306 (59%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + F + KK W + SG+ N + E++ +F+ ML +PD
Sbjct: 354 MYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIA 413
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + L L+QA+ H ++I++GF + + L+++Y+KC S+ A+ +F
Sbjct: 414 LVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK--G 471
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD++ WS+IIAAYG HG GE A+ F +M S KPN VTF S+L ACSH GL+ E
Sbjct: 472 MTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKE 531
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+++F M+ K+ + P +HY ++DLLGR G LD A +LI MP++ +WGALLGAC
Sbjct: 532 GINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGAC 591
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+++GEVAA+ F L+ + G YILL+N+Y W K+R +V E L K+
Sbjct: 592 RIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVG 651
Query: 299 QSLVEV 304
QS+VE+
Sbjct: 652 QSVVEL 657
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
+Y KC N + ++FM+ K W +++SG+ + A+ F +M+V E V PD
Sbjct: 151 LYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPV 210
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S+ A A L++ K ++H ++ R G +L +A+ L+ +Y K GS+ A ++F
Sbjct: 211 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR-- 268
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ DKDII WS + A Y +G + LF EM+ +KPN VT SVL AC+ + ++E
Sbjct: 269 EMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEE 328
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ + + + + T ++D+ + + A + MP K + W L
Sbjct: 329 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSG 385
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 157/337 (46%), Gaps = 48/337 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + +F + S K W+ + + + N + + LF +ML + ++P+ T
Sbjct: 253 LYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVT 312
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A +++L++ M IH + GF V++ L+D+Y KC S A FN +P
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ + + Y +G ++ +F M+ SG +P+ + +L S +G++ +
Sbjct: 373 --KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 430
Query: 181 LSLFQFMLKHHI-------IPLVDHY------------------------TCIIDLLGRA 209
+ F++K+ L++ Y + II G
Sbjct: 431 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 210 GRLDDA----YNLIRTMPIKPNHAVWGALLGACVSH-----ENVELGEVAARWTFELEPE 260
G+ ++A Y + KPN+ + ++L AC SH E + + ++ ++L+P
Sbjct: 491 GQGEEALKFFYQMANHSDTKPNNVTFISILSAC-SHSGLIKEGINMFDIMVN-KYKLKP- 547
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
N+ +Y ++ +L +GR +++ D++N + ++ P
Sbjct: 548 NSEHYAIMVDL---LGRMGELDMALDLINNMPMQAGP 581
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-----LVEDVQ 55
+YA+ + ++K+F +T K WNA+L + E + LF QM + + +
Sbjct: 45 LYARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEK 104
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
PDN + + L + A L L IH +L + + V S L+D+Y+KCG + A +
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEV 164
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHV 174
F P D+++W++I++ Y + G E+A++ F+ MV S V P+ VT SV AC+ +
Sbjct: 165 FMEYP--KPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP----------- 223
G S+ F+ + + + ++ L G+ G + +A NL R M
Sbjct: 223 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMF 282
Query: 224 -----------------------IKPNHAVWGALLGACVSHENVELG----EVAARWTFE 256
IKPN ++L AC N+E G E+A + FE
Sbjct: 283 ACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 342
Query: 257 LE 258
+E
Sbjct: 343 ME 344
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 183/306 (59%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + F + KK W + SG+ N + E++ +F+ ML +PD
Sbjct: 354 MYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIA 413
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + L L+QA+ H ++I++GF + + L+++Y+KC S+ A+ +F
Sbjct: 414 LVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK--G 471
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD++ WS+IIAAYG HG GE A+ F +M S KPN VTF S+L ACSH GL+ E
Sbjct: 472 MTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKE 531
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+++F M+ K+ + P +HY ++DLLGR G LD A +LI MP++ +WGALLGAC
Sbjct: 532 GINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGAC 591
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+++GEVAA+ F L+ + G YILL+N+Y W K+R +V E L K+
Sbjct: 592 RIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVG 651
Query: 299 QSLVEV 304
QS+VE+
Sbjct: 652 QSVVEL 657
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
+Y KC N + ++FM+ K W +++SG+ + A+ F +M+V E V PD
Sbjct: 151 LYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPV 210
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S+ A A L++ K ++H ++ R G +L +A+ L+ +Y K GS+ A ++F
Sbjct: 211 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR-- 268
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ DKDII WS + A Y +G + LF EM+ +KPN VT SVL AC+ + ++E
Sbjct: 269 EMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEE 328
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ + + + + T ++D+ + + A + MP K + W L
Sbjct: 329 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSG 385
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 157/337 (46%), Gaps = 48/337 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + +F + S K W+ + + + N + + LF +ML + ++P+ T
Sbjct: 253 LYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVT 312
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A +++L++ M IH + GF V++ L+D+Y KC S A FN +P
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+I W+ + + Y +G ++ +F M+ SG +P+ + +L S +G++ +
Sbjct: 373 --KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 430
Query: 181 LSLFQFMLKHHI-------IPLVDHY------------------------TCIIDLLGRA 209
+ F++K+ L++ Y + II G
Sbjct: 431 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 210 GRLDDA----YNLIRTMPIKPNHAVWGALLGACVSH-----ENVELGEVAARWTFELEPE 260
G+ ++A Y + KPN+ + ++L AC SH E + + ++ ++L+P
Sbjct: 491 GQGEEALKFFYQMANHSDTKPNNVTFISILSAC-SHSGLIKEGINMFDIMVN-KYKLKP- 547
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
N+ +Y ++ +L +GR +++ D++N + ++ P
Sbjct: 548 NSEHYAIMVDL---LGRMGELDMALDLINNMPMQAGP 581
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-----LVEDVQ 55
+YA+ + ++K+F +T K WNA+L + E + LF QM + + +
Sbjct: 45 LYARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEK 104
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
PDN + + L + A L L IH +L + + V S L+D+Y+KCG + A +
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEV 164
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHV 174
F P D+++W++I++ Y + G E+A++ F+ MV S V P+ VT SV AC+ +
Sbjct: 165 FMEYP--KPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP----------- 223
G S+ F+ + + + ++ L G+ G + +A NL R M
Sbjct: 223 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMF 282
Query: 224 -----------------------IKPNHAVWGALLGACVSHENVELG----EVAARWTFE 256
IKPN ++L AC N+E G E+A + FE
Sbjct: 283 ACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 342
Query: 257 LE 258
+E
Sbjct: 343 ME 344
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 184/305 (60%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + + K T ++A++SG + N A +A+ +F+QM + P T
Sbjct: 356 MYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLET 415
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LLPA + LA L+ H Y + GF + + ++D+YSKCG + + IF+
Sbjct: 416 MIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFD--R 473
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++DII W+ +I YG HG A+SLF E+ G+KP+ VT +VL ACSH GLV EG
Sbjct: 474 MQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEG 533
Query: 181 LSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M ++ +I P + HY C++DLL RAG LD+AY I+ MP PN +WGALL AC
Sbjct: 534 KYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACR 593
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H+N+E+GE ++ L PE TGN++L++N+Y++VGRW D +R + G +K P
Sbjct: 594 THKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGC 653
Query: 300 SLVEV 304
S VE+
Sbjct: 654 SWVEI 658
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MYAKC+ + K+F +KK W+A++ G++ + +A+ L+ ML + + P A
Sbjct: 254 MYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPA 313
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T ++L A A L DLK+ +HC++I+SG V + L+ +Y+KCG + A +
Sbjct: 314 TLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLD-- 371
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD + +SAII+ ++G+ E A+ +F +M SG+ P T ++L ACSH+ +
Sbjct: 372 EMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQH 431
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
G + + IID+ + G++
Sbjct: 432 GTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKI 464
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
L+ +F + K WN ++ + + +++I L+ ML V P N TF LL A
Sbjct: 58 QLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKAC 117
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ L L+ IH + G L V++ L+ +Y+KCG L A +FN I +D+DI+
Sbjct: 118 SSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVA 177
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+A+IAA+ H + +M Q+GV PN T S+L + +G ++ + +
Sbjct: 178 WNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYI 237
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
++ V T ++D+ + L A + T+ K N W A++G V H+++
Sbjct: 238 RNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN-KKNDVCWSAMIGGYVLHDSIS 293
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 189/280 (67%), Gaps = 3/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W A++SG N +A+++F QM E+V+P++ T SLL A A + LK+ +HC+ +
Sbjct: 533 WTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSM 592
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ GF+ + VA+ L+D+YS+ G L A+++FN I ++K + W+ ++ Y H HGE
Sbjct: 593 KLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKI--QEKTLPCWNCMMMGYAIHSHGEEV 650
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIID 204
+ L+++M + ++P+ +TFT++L AC + GLVDEG F M + ++I+P ++HY C++D
Sbjct: 651 MILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVD 710
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
LLG++G LD+A + I TMPIKP+ ++WGALL +C H+N++L E+AAR F++EP N+ N
Sbjct: 711 LLGKSGFLDEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNSAN 770
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
Y+L+ NLY+++ RW VE+++ + + ++ P S +V
Sbjct: 771 YVLMMNLYSSLNRWVAVERLKHSMTVLAMKIPPVWSWTQV 810
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 5/226 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN++LSG++ + F+ + +PD+ + S L A L K IH Y++
Sbjct: 362 WNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIM 421
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
RS Y + V + LVD+Y K L A + + K+K++ W+++I+ Y G A
Sbjct: 422 RSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLH--RAKNKNVCAWNSLISGYSFKGQFGEA 479
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
V L N+MV+ G+ P+ VT+ ++ S G +DE L++ + I P V +T +I
Sbjct: 480 VKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISG 539
Query: 206 LGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE 248
+ + DA + M +KPN +LL AC ++ GE
Sbjct: 540 CSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGE 585
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 38/228 (16%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K +C + + + K WN+++SG+ EA++L QM+ E + PD T
Sbjct: 438 MYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVT 497
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+N L+ Y++ + +A+ I + SG I P
Sbjct: 498 WNGLVSGYSMQGRIDEALTIINRIKSSG-----------------------------ITP 528
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+++ W+A+I+ ++ A+ +F++M VKPN T S+L AC+ L+ +G
Sbjct: 529 ----NVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKG 584
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI-----RTMP 223
L F +K + + T +ID+ AG+L AYN+ +T+P
Sbjct: 585 EELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLP 632
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQL---FKQMLVEDVQPDNATFNSLLPAYA 69
K+F + WN+ L F S + ++ F +M + V+ D+ F +L
Sbjct: 108 KIFFVGFARNYLLWNSFLEEF--ESFGGDPFEILVVFNEMYSKGVEFDSKAFTFVLKICL 165
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L + + +H LI+ GF + ++ L++ Y KC S+ A+ +F+ P K+ +W
Sbjct: 166 ALREFLFGLEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQVFHETPYKED--FLW 223
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+ I+ A + + A+ LF +M + K T +L AC + ++EG L + L+
Sbjct: 224 NTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGKQLHGYALR 283
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
++ II + R R A + +M
Sbjct: 284 FGLVSNTLVCNSIISMYSRNSRFKLARAVFDSM 316
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 109/273 (39%), Gaps = 37/273 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y KC + + ++F +T K WN ++ + + + A++LF M + + T
Sbjct: 198 FYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGT 257
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A L L + +H Y +R G + V + ++ +YS+ A +F+ +
Sbjct: 258 TVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSME 317
Query: 121 ---------------------LKDK---------------DIIIWSAIIAAYGKHGHGEM 144
L D DII W++I++ Y G EM
Sbjct: 318 DHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEM 377
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
++ F + G KP+ + TS L A +G G + ++++ ++ V T ++D
Sbjct: 378 VLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVD 437
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + L+ A ++ K N W +L+
Sbjct: 438 MYVKNDCLEKAQAVLHRAKNK-NVCAWNSLISG 469
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++ ++Y +F K +K WN ++ G+ +S E + L+ +M ++PD T
Sbjct: 609 MYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAIT 668
Query: 61 FNSLLPA----------YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLG 110
F +LL A + +++ NI + +E +VD+ K G L
Sbjct: 669 FTALLSACKNSGLVDEGWKYFDSMQEDYNI---------VPTIEHYCCMVDLLGKSGFLD 719
Query: 111 YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
A H +P+K D IW A++A+ H + ++A
Sbjct: 720 EASHFIETMPIK-PDASIWGALLASCKIHKNIKLA 753
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 190/304 (62%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+ + + ++F + WN++++GF+ N L +A++ M E +PD +TF
Sbjct: 400 YAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTF 459
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
L + A LA L+ +H +++SG++ L V++ L+ +Y+KCG + A +F I
Sbjct: 460 ACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDI-- 517
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ D+I W+++I+ Y +G+ A F +M G P++VTF +L ACSH GL ++G+
Sbjct: 518 EGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGV 577
Query: 182 SLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
LF+ M++ I PL +HY+C++DLLGR GRL++A+N++R M +K N +WG+LL AC
Sbjct: 578 DLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRV 637
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+N+ELG++AA ELEP N NYI L+N++A GRW DVE++R ++ E KLP S
Sbjct: 638 HKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCS 697
Query: 301 LVEV 304
+EV
Sbjct: 698 WIEV 701
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 142/292 (48%), Gaps = 32/292 (10%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F K S++ WN +++G++HN++ EA +LF M + DN ++ ++ Y
Sbjct: 69 QLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLM----AERDNFSWALMITCYTRKG 124
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L++A + + +L+ A + ++ Y+K G A +F +P+ KD++ ++
Sbjct: 125 MLEKARELFELVPD-----KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPV--KDLVSYN 177
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+++A Y ++G +A+ F M + V + ++ C + LF+
Sbjct: 178 SMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCD----LGSAWELFE----- 228
Query: 191 HIIPLVDHYTCIIDLLG--RAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
IP + + + L G R G++ +A L MP K N W A++ A V +++++ E
Sbjct: 229 -KIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCK-NVVSWNAMIAAYV--QDLQIDE 284
Query: 249 VAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
A + E ++ ++ + N Y VG+ +++ R++ N++ + + A++
Sbjct: 285 -AVKLFKETPYKDCVSWTTMINGYVRVGK---LDEAREVYNQMPYKDVAAKT 332
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 10 LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
L+ K F + +++ WN +++GF++N A +LF+++ P+ ++ ++L +A
Sbjct: 191 LAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKI----PDPNAVSWVTMLCGFA 246
Query: 70 ILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ +A + + ++ + +A+ + D+ + A +F P KD +
Sbjct: 247 RHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDL-----QIDEAVKLFKETPY--KDCVS 299
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+ +I Y + G + A ++N+M V T+++ G +DE +F +
Sbjct: 300 WTTMINGYVRVGKLDEAREVYNQMPYKDVAAK----TALMSGLIQNGRIDEASQVFSQLN 355
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
K I + +I ++GR+ +A NL R MP+K N W ++
Sbjct: 356 KRDAIC----WNSMIAGYCQSGRMSEALNLFRQMPVK-NAVSWNTMISG 399
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + K+F WN+++SG+ N A EA F+QM E PD T
Sbjct: 500 MYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVT 559
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRL-EVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + Q +++ +I + L E S LVD+ + G L A +I +
Sbjct: 560 FIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGM 619
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
+K + +W +++AA H + E+
Sbjct: 620 KVK-ANAGLWGSLLAACRVHKNMELG 644
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 183/293 (62%), Gaps = 4/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAIL 71
K+F + ++ WN ++ G++ N L E ++ FK+MLVE V P++ T ++L A + L
Sbjct: 259 KVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRL 318
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
L +H Y G+ L V ++L+D+Y+KCG + A +FN L KDII W+
Sbjct: 319 GALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNC--LDRKDIISWNT 376
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
II HGH A+ +F+ M G +P+ VTF +L AC+H+GLV +G F+ M+ H+
Sbjct: 377 IINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHY 436
Query: 192 -IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
I+P ++HY C++DLLGRAG LD A N IR MPI+P+ +W ALLGAC ++NVE+ E+A
Sbjct: 437 SIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELA 496
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+ ELEP N N+++++N+Y +GR DV +++ + + G RKLP S++E
Sbjct: 497 LQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIE 549
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F K + TA WNA+ G++ N R+ + LF ++ P+ TF ++ + L
Sbjct: 65 KLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLE 124
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+++ +HC + GF VA+ L+D+YSK G + A+ +F + ++++++W+AI
Sbjct: 125 GVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFG--EMHERNVVVWTAI 182
Query: 133 IAAY 136
I Y
Sbjct: 183 INGY 186
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
Query: 79 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGK 138
I ++ G + VA + S+ + +A +F+ IP + W+A+ Y +
Sbjct: 30 QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP--QPNTATWNAMFRGYLQ 87
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH 198
+GH V LF E+ + PN TF ++ +C + V EG + KH
Sbjct: 88 NGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFV 147
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
T +ID+ + G ++DAY + M + N VW A++ + +V V+ R F+L
Sbjct: 148 ATSLIDMYSKKGCVEDAYKVFGEMH-ERNVVVWTAIINGYILCGDV----VSGRRLFDLA 202
Query: 259 PE 260
PE
Sbjct: 203 PE 204
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F +K WN +++G + A +A+ +F +M E +PD T
Sbjct: 349 MYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVT 408
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGS 108
F +L A H L++ GFLY ++E +VD+ + G
Sbjct: 409 FVGILSACT-----------HMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGL 457
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
L A + +P+ + D +IW+A++ A + + E+A +++ ++PN
Sbjct: 458 LDQALNFIRKMPI-EPDAVIWAALLGACRLYKNVEIAELALQRLIE--LEPNN 507
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP--DN 58
MY+K C +YK+F + ++ W A+++G+I +LF D+ P D
Sbjct: 154 MYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLF------DLAPERDV 207
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
++ L+ Y ++ A + + + + +++ Y+ G + +F+
Sbjct: 208 VMWSVLISGYIESKNMAAARELFDKMPNRDTMS----WNAMLNGYAVNGEVEMFEKVFDE 263
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLV 177
+P ++++ W+ +I Y K+G + F M+ G V PN T +VL ACS +G +
Sbjct: 264 MP--ERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGAL 321
Query: 178 DEG 180
D G
Sbjct: 322 DMG 324
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 181/304 (59%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K N + ++F + W +++G+ +A+ +F++M + ++PD +
Sbjct: 187 YVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISI 246
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++LPA A L L+ IH Y ++GFL + + + L+++Y+KCG + A ++F+ L
Sbjct: 247 IAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFD--QL 304
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+KD+I WS +I HG G A+ LF EM + V PN++TF VL ACSH GL DEGL
Sbjct: 305 VEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGL 364
Query: 182 SLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M +HI P ++HY C+IDLLGR+G L A + I MPIKP+ +W +LL +C
Sbjct: 365 KYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRI 424
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N+++ +A + ELEPE +GNY+LLAN+YA G+W DV +R ++ ++K P S
Sbjct: 425 HRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSS 484
Query: 301 LVEV 304
+EV
Sbjct: 485 SIEV 488
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 35/270 (12%)
Query: 6 NCGNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV---EDVQPDNAT 60
N G++SY +F + +NA++ + HN AI +F QML V PD T
Sbjct: 54 NLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFT 113
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++ + + + M +H + + G + + L+D+Y+K G L A +F +
Sbjct: 114 FPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMS 173
Query: 121 LKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
+D + I+ W+ +I YG+ G A+ +F E
Sbjct: 174 HRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE 233
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
M G++P++++ +VL AC+ +G ++ G + + K+ + +I++ + G
Sbjct: 234 MQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGC 293
Query: 212 LDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+D+A+NL + ++ + W ++G +H
Sbjct: 294 IDEAWNLFDQL-VEKDVISWSTMIGGLANH 322
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C + ++ +F + +K W+ ++ G ++ EAIQLF++M V P+ T
Sbjct: 287 MYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEIT 346
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + + + + S + +E L+D+ + G LG A + +
Sbjct: 347 FLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKM 406
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
P+K D IW++++++ H + ++AV ++++
Sbjct: 407 PIK-PDSRIWNSLLSSCRIHRNLQIAVIAVKQLME 440
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 181/304 (59%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K N + ++F + W +++G+ +A+ +F++M + ++PD +
Sbjct: 187 YVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISI 246
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++LPA A L L+ IH Y ++GFL + + + L+++Y+KCG + A ++F+ L
Sbjct: 247 IAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFD--QL 304
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+KD+I WS +I HG G A+ LF EM + V PN++TF VL ACSH GL DEGL
Sbjct: 305 VEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGL 364
Query: 182 SLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M +HI P ++HY C+IDLLGR+G L A + I MPIKP+ +W +LL +C
Sbjct: 365 KYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRI 424
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N+++ +A + ELEPE +GNY+LLAN+YA G+W DV +R ++ ++K P S
Sbjct: 425 HRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSS 484
Query: 301 LVEV 304
+EV
Sbjct: 485 SIEV 488
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 35/270 (12%)
Query: 6 NCGNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV---EDVQPDNAT 60
N G++SY +F + +NA++ + HN AI +F QML V PD T
Sbjct: 54 NLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFT 113
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++ + + + M +H + + G + + L+D+Y+K G L A +F +
Sbjct: 114 FPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMS 173
Query: 121 LKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
+D + I+ W+ +I YG+ G A+ +F E
Sbjct: 174 HRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE 233
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
M G++P++++ +VL AC+ +G ++ G + + K+ + +I++ + G
Sbjct: 234 MQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGC 293
Query: 212 LDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+D+A+NL + ++ + W ++G +H
Sbjct: 294 IDEAWNLFDQL-VEKDVISWSTMIGGLANH 322
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C + ++ +F + +K W+ ++ G ++ EAIQLF++M V P+ T
Sbjct: 287 MYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEIT 346
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + + + + S + +E L+D+ + G LG A + +
Sbjct: 347 FLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKM 406
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
P+K D IW++++++ H + ++AV ++++
Sbjct: 407 PIK-PDSRIWNSLLSSCRIHRNLQIAVIAVKQLME 440
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 192/306 (62%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K N +L+ +F ++ +K WNA++SG+ N AI LFK+M+ + P+ T
Sbjct: 354 IYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVT 413
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
++L A A L L +H +LI+S L + V++ LVD+Y+KCG++ A +F+
Sbjct: 414 ITTILSACAQLGSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFD-- 470
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ +K+ + W+ +I YG HG+G A+ L+NEM+ G P+ VTF SVL+ACSH GLV E
Sbjct: 471 SMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGE 530
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G +F M+ K+ I PL++HY C++D+LGR+G+L+ A I+ MP++P AVWG LLGAC
Sbjct: 531 GEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGAC 590
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
+ H++ ++ +A+ FEL+P + G Y+LL+N+Y+ + +R +V + L K P
Sbjct: 591 MIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPG 650
Query: 299 QSLVEV 304
+L+EV
Sbjct: 651 CTLIEV 656
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 7/235 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F ++ T WN +++G + N ++IQLF++M+ + V+ D++T ++LPA A L
Sbjct: 164 KVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQ 223
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+LK M I C ++ GF + V + L+ +YSKCG + A +F I D+I ++A+
Sbjct: 224 ELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRI--NRPDLIAYNAM 281
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I+ + +G E +V LF E++ SG + + T ++ S G + S+ F +K I
Sbjct: 282 ISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGI 341
Query: 193 I--PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
I P V T + + +D A +L P K A W A++ + + E
Sbjct: 342 ILNPTVS--TAFTAIYNKLNEIDLARHLFDESPEKTVVA-WNAMISGYTQNGSTE 393
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILA 72
+F K +N ++ GF N +I L+ + ++ PDN T+ A+A+ A
Sbjct: 66 LFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTY-----AFAVAA 120
Query: 73 --DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+ K M +H + I G+ + V S LVD+Y K + YA +F+ +P ++D ++W+
Sbjct: 121 CSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMP--ERDTVLWN 178
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+I K+ + ++ LF EMV GV+ + T T+VL A + + + G+ + LK
Sbjct: 179 TMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKI 238
Query: 191 HIIPLVDH-YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
D+ T +I L + G ++ A L R + +P+ + A++ ++ E
Sbjct: 239 G-FGFCDYVLTGLISLYSKCGDVNTARLLFRRIN-RPDLIAYNAMISGFTANGGTE 292
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 189/318 (59%), Gaps = 14/318 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSG-------------FIHNSLAREAIQLFK 47
YAK +S +F + ++ A WN +L+ F + E++ LF+
Sbjct: 296 FYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFR 355
Query: 48 QMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 107
M V ++P+ T +L+ A + L + Q +HC+++R+ V + VD+YSKCG
Sbjct: 356 DMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCG 415
Query: 108 SLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSV 167
L A +F+ +P D+D ++A+I + HG+G A+ L+ +M G+ P+ TF
Sbjct: 416 CLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVT 475
Query: 168 LHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP 226
+ ACSHVGLV+EGL +F+ M + H + P ++HY C+IDLLGRAGRL +A + MP+KP
Sbjct: 476 MFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKP 535
Query: 227 NHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRD 286
N +W +LLGA H N+ +GEVA ELEPE +GNY+LL+N+YA+VGR DV++VR
Sbjct: 536 NAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRK 595
Query: 287 MVNEVGLRKLPAQSLVEV 304
++ G+ KLP SLVE+
Sbjct: 596 LMKHHGVNKLPGFSLVEI 613
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 183/305 (60%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY C + S ++F K + +NA++ N+ A EA+ LF+++ ++P + T
Sbjct: 156 MYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVT 215
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + A+L L +H Y+ + GF ++V + L+D+Y+KCGSL A ++F +P
Sbjct: 216 MLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMP 275
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D WSAII AY HG G A+S+ NEM + V+P+++TF +L+ACSH GLV+EG
Sbjct: 276 KRDTQA--WSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEG 333
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M + I+P + HY C++DLLGRAGRLD+AY I +PIKP +W LL AC
Sbjct: 334 FEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACS 393
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H NVE+G+ FEL+ + G+Y++ +NL A G+W DV +R + + G K+P
Sbjct: 394 THGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGC 453
Query: 300 SLVEV 304
S +EV
Sbjct: 454 SSIEV 458
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILAD--------------------LKQAMNIH 81
A QLF Q+ QP+ FN++ YA L D L + +H
Sbjct: 80 AHQLFDQI----TQPNIVLFNTMARGYARLNDPLRMITHFRRCLRLVSKVKALAEGKQLH 135
Query: 82 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGH 141
C+ ++ G + V L+++Y+ CG + + +F+ I + ++ ++AII + ++
Sbjct: 136 CFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKI--DEPCVVAYNAIIMSLARNNR 193
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC 201
A++LF E+ + G+KP VT VL +C+ +G +D G + +++ K+ V T
Sbjct: 194 ANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTT 253
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ID+ + G LDDA N+ R MP + A W A++ A +H
Sbjct: 254 LIDMYAKCGSLDDAVNVFRDMPKRDTQA-WSAIIVAYATH 292
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 192/306 (62%), Gaps = 9/306 (2%)
Query: 4 KCNCGNLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
KC+ +S ++F ++ R P W +VLSGF+ N EA FK+ML+ P +A
Sbjct: 246 KCDREMVS-EIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSA 304
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T ++LLPA A A ++ IH Y + G L V S LVD+Y+KCG + A +F +
Sbjct: 305 TISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKM 364
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHVGLVD 178
P +K+ + +++I Y HG E A+ LFN+M GV K + +TFT+ L ACSHVG ++
Sbjct: 365 P--EKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIE 422
Query: 179 EGLSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G LF+ M + + I P ++HY C++DL GRAG+L++AY +I++MP+KP+ VWGALL A
Sbjct: 423 LGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAA 482
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C +H +VEL EVAA+ ELEPE+ GN +LL++LYA G W VE+++ + + LRKL
Sbjct: 483 CRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQ 542
Query: 298 AQSLVE 303
S ++
Sbjct: 543 GLSWID 548
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 7/253 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y C +++ K+F K + W A+++ A+++F +M + Q N+
Sbjct: 73 LYTTCGQLSIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSV 132
Query: 61 F--NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F S+L A + D +HC +++ F V+S L+ +YSKCG + A +F+
Sbjct: 133 FVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDG 192
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ + KD++ +A+++ Y + G A+SL M GV PN VT+ +++ + +
Sbjct: 193 MVV--KDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDRE 250
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALL 235
+F+ M + + P V +T ++ + R ++A++ + M + P A ALL
Sbjct: 251 MVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALL 310
Query: 236 GACVSHENVELGE 248
AC + V G+
Sbjct: 311 PACATEARVRFGK 323
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 54 VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
++ + ++ L+ Y L+Q +H L +G++ +AS L+ +Y+ CG L A
Sbjct: 25 LRSEPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIAR 84
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFT--SVLHAC 171
+F+ IP +I W A+IA + G + A+ +F+EM + + F SVL AC
Sbjct: 85 KLFDKIP--QTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKAC 142
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
HVG G + +LK + +I + + G + DA + M +K
Sbjct: 143 GHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVK 196
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 192/307 (62%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + + +F ++ A++SG+ L EA++LF+++ E ++ + T
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L A + LA L +H +++RS + + + L+D+YSKCG+L Y+ IF+
Sbjct: 61 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDT-- 118
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ ++ +I W+A++ Y KHG G + LF M + + VKP+ VT +VL CSH GL D+
Sbjct: 119 MYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDK 178
Query: 180 GLSLFQFML--KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
GL++F M K + P ++HY C++DLLGR+GR+++A+ I+ MP +P A+WG+LLGA
Sbjct: 179 GLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGA 238
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H NV++GE A + E+EP N GNY++L+NLYA+ GRW DV +RD++ + + K P
Sbjct: 239 CRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEP 298
Query: 298 AQSLVEV 304
+S +E+
Sbjct: 299 GRSSIEL 305
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 192/307 (62%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + + +F ++ A++SG+ L EA++LF+++ E ++ + T
Sbjct: 185 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 244
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L A + LA L +H +++RS + + + L+D+YSKCG+L Y+ IF+
Sbjct: 245 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDT-- 302
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ ++ +I W+A++ Y KHG G + LF M + + VKP+ VT +VL CSH GL D+
Sbjct: 303 MYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDK 362
Query: 180 GLSLFQFML--KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
GL++F M K + P ++HY C++DLLGR+GR+++A+ I+ MP +P A+WG+LLGA
Sbjct: 363 GLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGA 422
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H NV++GE A + E+EP N GNY++L+NLYA+ GRW DV +RD++ + + K P
Sbjct: 423 CRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEP 482
Query: 298 AQSLVEV 304
+S +E+
Sbjct: 483 GRSSIEL 489
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC+ ++ +F + ++ W A++S + A +A+ LF QML +P+ T
Sbjct: 84 LYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFT 143
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++L + IH +I+ + + V S L+D+Y+K G + A +F +P
Sbjct: 144 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 203
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D++ +AII+ Y + G E A+ LF + G+K N VT+T VL A S + +D G
Sbjct: 204 --ERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLG 261
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ +L+ I V +ID+ + G L + + TM + W A+L
Sbjct: 262 KQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM-YERTVISWNAML 315
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 103/189 (54%), Gaps = 20/189 (10%)
Query: 44 QLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 103
Q QM + +N++L ++ +H ++I++ +L + + + L+ +Y
Sbjct: 26 QPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLY 85
Query: 104 SKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVT 163
+KC SLG AH++F+ +P +++++ W+A+I+AY + G+ A++LF +M++SG +PN+ T
Sbjct: 86 TKCDSLGDAHNVFDEMP--ERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFT 143
Query: 164 FTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLV------DHY---TCIIDLLGRAGRLDD 214
F +VL +C+ S F+L I L+ DH + ++D+ + G++ +
Sbjct: 144 FATVLTSCT---------SSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHE 194
Query: 215 AYNLIRTMP 223
A + +P
Sbjct: 195 ARTVFECLP 203
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 193/309 (62%), Gaps = 9/309 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC +++ ++F +K WN ++ G+ + SL EA+ LF+ ML +V+P++ T
Sbjct: 307 MYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVT 366
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI---LVDIYSKCGSLGYAHHIFN 117
F +L A A L L +H Y+ ++ L AS+ L+D+Y+KCG + A +F
Sbjct: 367 FLGILHACACLGALDLGKWVHAYIDKN--LRNSSNASLWTSLIDMYAKCGCIEAAERVFR 424
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHVGL 176
+ +++ W+A+++ + HGH E A++LF+EMV G+ +P+ +TF VL AC+ GL
Sbjct: 425 --SMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGL 482
Query: 177 VDEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
VD G F+ M++ + I P + HY C+IDLL RA + ++A L++ M ++P+ A+WG+LL
Sbjct: 483 VDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLL 542
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
AC +H VE GE A F+LEPEN G ++LL+N+YA GRW DV ++R +N+ G++K
Sbjct: 543 SACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKK 602
Query: 296 LPAQSLVEV 304
+P + +E+
Sbjct: 603 VPGCTSIEI 611
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 4/245 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y C + + ++F + K WNA++SG++ + EAI F +M +V P+ +T
Sbjct: 207 YVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTM 266
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L A + I ++ +GF L++ + L+D+Y KCG A +F+ I
Sbjct: 267 VVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGI-- 324
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++KD+I W+ +I Y E A++LF M++S VKPN VTF +LHAC+ +G +D G
Sbjct: 325 EEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGK 384
Query: 182 SLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ ++ K+ +T +ID+ + G ++ A + R+M + N A W A+L
Sbjct: 385 WVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAM 443
Query: 241 HENVE 245
H + E
Sbjct: 444 HGHAE 448
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 35/264 (13%)
Query: 8 GNLSYKMFM-----KTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
G+LSY + + + K WN+++ G+ +S ++ LF +ML VQP++ TF
Sbjct: 76 GDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFP 135
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
L + + +H + ++ + V + ++ +Y+ G + +A +F+ L+
Sbjct: 136 FLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLR 195
Query: 123 D-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
D KD++ W+A+I+ Y + G E A+ F EM
Sbjct: 196 DAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ 255
Query: 154 QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
++ V PN+ T VL AC H + G + ++ + + +ID+ + G D
Sbjct: 256 EANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETD 315
Query: 214 DAYNLIRTMPIKPNHAVWGALLGA 237
A L + K + W ++G
Sbjct: 316 IARELFDGIEEK-DVISWNTMIGG 338
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 188/305 (61%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + SY +F + SK+ WNA+++G+ N +A LF +M PD+ T
Sbjct: 413 MYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSIT 472
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SL+ A L IH ++IR+G + V + LVD+Y KCG L A FN++P
Sbjct: 473 IVSLVQGCASTGQLHPGKWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMP 532
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D++ WSAIIA YG HG GE A+ L+++ +++ +KPN V F S+L +CSH GL+D+G
Sbjct: 533 --SQDLVSWSAIIAGYGYHGKGETALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQG 590
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L++++ M + +P ++H+ C++DLL RAG++++AYNL + M P V G +L AC
Sbjct: 591 LNIYESMTRDFGFVPNLEHHACMVDLLCRAGKVEEAYNLYKRMFSDPVLDVLGIILDACR 650
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
++ N ELG++ A +L P + GNY+ LA+ YA++ +W V +V + +GLRK+P
Sbjct: 651 ANGNKELGDIIANDIIKLRPMSAGNYVQLAHCYASINKWEGVGEVWTHMRSLGLRKIPGW 710
Query: 300 SLVEV 304
S +++
Sbjct: 711 SFIDI 715
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 139/275 (50%), Gaps = 7/275 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K N+++KMF ++ K W A++SG + N A +A+ +F QM ++P T
Sbjct: 312 MYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTET 371
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A A L +IH Y++R + LV +Y+KCG L ++ +F+
Sbjct: 372 MASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFD--R 429
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +D++ W+AI+A Y ++G A SLFNEM P+ +T S++ C+ G + G
Sbjct: 430 MSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPG 489
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ F++++ + P + T ++D+ + G LD A MP + + W A++
Sbjct: 490 KWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQ-DLVSWSAIIAGYGY 548
Query: 241 HENVELGEVAAR-WTFELEPENTGNYILLANLYAA 274
H GE A R ++ LE N+++ ++ ++
Sbjct: 549 HGK---GETALRLYSKFLETRIKPNHVIFLSILSS 580
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 120/237 (50%), Gaps = 3/237 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC K+F ++ WN++LS + E + L K+M ++ ++P
Sbjct: 211 LYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQA 270
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L D++ +H ++R GF+ + + + +Y K G++ A +F
Sbjct: 271 FGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFE--R 328
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
DKD+++W+A+I+ ++ + + A+++F++M + G+KP+ T SV+ AC+ +G + G
Sbjct: 329 SLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLG 388
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
S+ ++L+ + + ++ + + G LD +Y + M K + W A++
Sbjct: 389 KSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRMS-KRDLVSWNAIVAG 444
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 8/263 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y K +++ K+F ++ PW V+ + REA LF+QM E +QP + T
Sbjct: 113 FYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVT 172
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SLL ++++ +H I GF+ L + + +V++Y KCGS+ +F
Sbjct: 173 LLSLLFG---VSEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEF-- 227
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +D++ W+++++AY + G + L M G++P F SVL G + G
Sbjct: 228 MDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLG 287
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +L+ + T I + + G ++ A+ + + + +W A++ V
Sbjct: 288 RLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFER-SLDKDVVLWTAMISGLVQ 346
Query: 241 HENVE--LGEVAARWTFELEPEN 261
+EN + L + F ++P
Sbjct: 347 NENADKALAVFDQMFKFGMKPST 369
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 12/223 (5%)
Query: 18 TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQA 77
+S T +NA+++ R+ + + ML ++ D TF SLL A + L
Sbjct: 29 SSSATTHSYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLG 88
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
++H +I +G +AS L++ Y K G A +F+ +P +++++ W+ +I Y
Sbjct: 89 NSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMP--ERNVVPWTTVIGCYS 146
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD--EGLSLFQ-FMLKHHIIP 194
K G A SLF +M G++P+ VT S+L S V V G ++F FM +++
Sbjct: 147 KMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMSDLNLL- 205
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+++L G+ G ++D L M + + W +LL A
Sbjct: 206 -----NSMVNLYGKCGSIEDCRKLFEFMD-RRDVVSWNSLLSA 242
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 187/305 (61%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + K+F K W V+ G + A E++ LF ++ E D
Sbjct: 145 MYAKCAVIEDARKLFDVMVSKDLVTW-TVMIGCYADYDAYESLVLFDRLREEGFVSDKVA 203
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++ A A L + +A ++ Y+ +G + + + ++D+Y+KCG + A +F+
Sbjct: 204 MVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFD--R 261
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+K++I WSA+IAAYG HG G+ A+ LF+ M+ G+ PN++TF S+L+ACSH GL DEG
Sbjct: 262 MKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEG 321
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F M + + + P V HYTC++DLLGRAGRLD+A LI TM ++ + +W ALLGAC
Sbjct: 322 LHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGACR 381
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N+EL A EL+P+N G Y+LL+N+YA G+W V + RD++ + L+K+P
Sbjct: 382 VHGNMELAGKVAESLLELQPKNPGIYVLLSNIYAKAGKWEKVGEFRDLMTQRKLKKVPGW 441
Query: 300 SLVEV 304
+ +EV
Sbjct: 442 TWIEV 446
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 111/229 (48%), Gaps = 4/229 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N +Y +F + + W+ ++ GF F+++L ++ PDN T ++ A
Sbjct: 52 NDAYYLFDEMPTRDPTTWSIMVGGFSKLGDYNNCYATFREILRCNITPDNYTLPFVIRAC 111
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
D++ IH +++ G + V + LVD+Y+KC + A +F++ + KD++
Sbjct: 112 RDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDV--MVSKDLVT 169
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+ +I Y + E V LF+ + + G ++V +V++AC+ +G + + +++
Sbjct: 170 WTVMIGCYADYDAYESLV-LFDRLREEGFVSDKVAMVTVVNACAKLGAMHRARFVNEYIC 228
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + V T +ID+ + G +D A + M K N W A++ A
Sbjct: 229 GNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEK-NVISWSAMIAA 276
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 185/306 (60%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA C + +F WN++++G+ + A F+++ V + +P++ T
Sbjct: 383 MYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHIT 442
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+LP + L+Q IHCY RSG + V + L+D+YSKCG L +FN +
Sbjct: 443 LVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMM 502
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+ I ++ +I+A G HG GE + + +M ++G+KPN+VTF S+L ACSH GLVD G
Sbjct: 503 VKNT--ITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRG 560
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L+ M+ + I P ++HY+C++DL+GR G LD AY I TMP+ P+ V G+LLGAC
Sbjct: 561 WLLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVTPDANVLGSLLGACR 620
Query: 240 SHENVELG-EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H VEL ++ A F+L E++G+Y+LL+NLYA+ RW D+ KVR ++ + GL K P
Sbjct: 621 LHNKVELADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPG 680
Query: 299 QSLVEV 304
S ++V
Sbjct: 681 SSWIQV 686
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 146/299 (48%), Gaps = 11/299 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + +F + W+ +++G+ N + +E+ +L+ +M+ + +
Sbjct: 282 MYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIV 341
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++LPA L KQ +H ++++ G L + V S LVD+Y+ CGS+ A IF
Sbjct: 342 VSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIFR--N 399
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D DI++W+++IA Y G + A F E+ + +PN +T SVL C+ +G + +G
Sbjct: 400 MLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQG 459
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ + + + + +ID+ + G L+ + M +K N + ++ AC +
Sbjct: 460 KEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVK-NTITYNTMISACGA 518
Query: 241 HENVELGEVAARWTFEL-EPENTGNYILLANLYAAVGRWRDVEK----VRDMVNEVGLR 294
H LGE ++ ++ E N + +L +A V++ MVN+ G++
Sbjct: 519 H---GLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSMVNDYGIK 574
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 127/238 (53%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+ KC + K+F + + + A W A++ G + N EA+ LF++M +E ++ D+
Sbjct: 180 MFVKCESLEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVI 239
Query: 61 FNSLLPAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+LP L + LK M +H +RSGF L V++ ++D+Y KCG A +F+ +
Sbjct: 240 VASVLPVCGRLMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYM 299
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+DI+ WS +IA Y ++G + + L+ MV G+ N++ ++VL A + L +
Sbjct: 300 VF--RDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQ 357
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G + F+LK ++ V + ++D+ G + +A ++ R M + + VW +L+
Sbjct: 358 GKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNM-LDMDIMVWNSLIAG 414
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 12/285 (4%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++ F + K WNA+L I ++ +IQ + ML PDN T+ +L A +
Sbjct: 89 AFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPDNYTYPLVLKACSS 148
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L ++ ++ ++ + L V L+D++ KC SL A +F+ + +D+ W+
Sbjct: 149 LQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFD--EMNVRDLATWT 206
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM--- 187
A+I +G + AV LF +M G+K + V SVL C G + EGL L M
Sbjct: 207 ALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVC---GRLMEGLKLGMAMHGC 263
Query: 188 -LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
L+ + IID+ + G D+A + M + + W L+ +N
Sbjct: 264 ALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFR-DIVSWSTLIAG--YSQNGMY 320
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
E + + T N I+++ + A+G+ + ++ ++M N V
Sbjct: 321 KESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFV 365
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 192/336 (57%), Gaps = 34/336 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVL------------------------------ 30
MYAK C + +F + S K A WNA++
Sbjct: 123 MYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTM 182
Query: 31 -SGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSG 88
SG++ N +A+ LF +M E DV P+ T S+LPA A L L+ + Y ++G
Sbjct: 183 VSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNG 242
Query: 89 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSL 148
F L V + ++++Y+KCG + A +F+ I + +++ W+++I HG A+ L
Sbjct: 243 FFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIG-RFRNLCSWNSMIMGLAVHGQCHKAIQL 301
Query: 149 FNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH-HIIPLVDHYTCIIDLLG 207
+++M++ G P+ VTF +L AC+H G+V++G +FQ M + +IIP ++HY C++DLLG
Sbjct: 302 YDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLG 361
Query: 208 RAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYIL 267
RAGRL +AY +I+ MP+KP+ +WG LLGAC H NVEL EVAA F LEP N GNY++
Sbjct: 362 RAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVI 421
Query: 268 LANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
L+N+YA+ G+W V K+R ++ + K QS +E
Sbjct: 422 LSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIE 457
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 31 SGFIHNSLAR------EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
+ F++N L + + L+ QM + P+ TFN L L+ L IH
Sbjct: 46 TTFLYNKLIQACSSKHQCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQF 105
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--------------------- 123
++SGF + + ++ L+D+Y+K G L +A ++F+ + +K+
Sbjct: 106 MKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERAL 165
Query: 124 --------KDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHV 174
++++ W+ +++ Y ++ E A+ LF M + V PN+VT SVL AC+++
Sbjct: 166 ELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANL 225
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
G ++ G + + K+ + ++++ + G++D A+ + + N W ++
Sbjct: 226 GALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSM 285
Query: 235 LGACVSH 241
+ H
Sbjct: 286 IMGLAVH 292
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 179/292 (61%), Gaps = 3/292 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ F K WN+V++G+ N + AI+LF QM ++ +PD T +S+L L
Sbjct: 360 EFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLV 419
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DL IH ++ ++ + L + + L+ +YS+CG +G A H+FN + L KD+I W+A+
Sbjct: 420 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLY-KDVITWNAM 477
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I Y HG A+ LF M ++P +TF SVL+AC+H GLV+EG F M+ +
Sbjct: 478 IGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYG 537
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P V+H+ ++D+LGR G+L +A +LI MP+KP+ AVWGALLGAC H NV+L +VAA
Sbjct: 538 IEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAA 597
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+ LEPE++ Y LL NLYA +G+W D E+VR ++ E ++K S ++
Sbjct: 598 KALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
K+ WN+++ ++ A +LF +M V+ D ++N+++ Y + D+++A
Sbjct: 274 KRNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEA-- 327
Query: 80 IHCYLIRSGFLYRLEVASIL-----VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
S + + +L + +S+ G L F +P K++I W+++IA
Sbjct: 328 -------SKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP--HKNLISWNSVIA 378
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD--EGLSLFQFMLKHHI 192
Y K+ + A+ LF++M G +P++ T +S+L + GLVD G + QF+ K +
Sbjct: 379 GYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTK-TV 435
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+P + +I + R G + DA ++ M + + W A++G H
Sbjct: 436 VPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFH 484
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 179/292 (61%), Gaps = 3/292 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ F K WN+V++G+ N + AI+LF QM ++ +PD T +S+L L
Sbjct: 360 EFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLV 419
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DL IH ++ ++ + L + + L+ +YS+CG +G A H+FN + L KD+I W+A+
Sbjct: 420 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLY-KDVITWNAM 477
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I Y HG A+ LF M ++P +TF SVL+AC+H GLV+EG F M+ +
Sbjct: 478 IGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYG 537
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P V+H+ ++D+LGR G+L +A +LI MP+KP+ AVWGALLGAC H NV+L +VAA
Sbjct: 538 IEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAA 597
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+ LEPE++ Y LL NLYA +G+W D E+VR ++ E ++K S ++
Sbjct: 598 KALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
K+ WN+++ ++ A +LF +M V+ D ++N+++ Y + D+++A
Sbjct: 274 KRNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEA-- 327
Query: 80 IHCYLIRSGFLYRLEVASIL-----VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
S + + +L + +S+ G L F +P K++I W+++IA
Sbjct: 328 -------SKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP--HKNLISWNSVIA 378
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD--EGLSLFQFMLKHHI 192
Y K+ + A+ LF++M G +P++ T +S+L + GLVD G + QF+ K +
Sbjct: 379 GYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTK-TV 435
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+P + +I + R G + DA ++ M + + W A++G H
Sbjct: 436 VPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFH 484
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 179/292 (61%), Gaps = 3/292 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ F K WN+V++G+ N + AI+LF QM ++ +PD T +S+L L
Sbjct: 360 EFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLV 419
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DL IH ++ ++ + L + + L+ +YS+CG +G A H+FN + L KD+I W+A+
Sbjct: 420 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLY-KDVITWNAM 477
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I Y HG A+ LF M ++P +TF SVL+AC+H GLV+EG F M+ +
Sbjct: 478 IGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYG 537
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P V+H+ ++D+LGR G+L +A +LI MP+KP+ AVWGALLGAC H NV+L +VAA
Sbjct: 538 IEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAA 597
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+ LEPE++ Y LL NLYA +G+W D E+VR ++ E ++K S ++
Sbjct: 598 KALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
K+ WN+++ ++ A +LF +M V+ D ++N+++ Y + D+++A
Sbjct: 274 KRNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEA-- 327
Query: 80 IHCYLIRSGFLYRLEVASIL-----VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
S + + +L + +S+ G L F +P K++I W+++IA
Sbjct: 328 -------SKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP--HKNLISWNSVIA 378
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD--EGLSLFQFMLKHHI 192
Y K+ + A+ LF++M G +P++ T +S+L + GLVD G + QF+ K +
Sbjct: 379 GYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTK-TV 435
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+P + +I + R G + DA ++ M + + W A++G H
Sbjct: 436 VPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFH 484
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 179/292 (61%), Gaps = 3/292 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ F K WN+V++G+ N + AI+LF QM ++ +PD T +S+L L
Sbjct: 360 EFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLV 419
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DL IH ++ ++ + L + + L+ +YS+CG +G A H+FN + L KD+I W+A+
Sbjct: 420 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLY-KDVITWNAM 477
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I Y HG A+ LF M ++P +TF SVL+AC+H GLV+EG F M+ +
Sbjct: 478 IGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYG 537
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P V+H+ ++D+LGR G+L +A +LI MP+KP+ AVWGALLGAC H NV+L +VAA
Sbjct: 538 IEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAA 597
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+ LEPE++ Y LL NLYA +G+W D E+VR ++ E ++K S ++
Sbjct: 598 KALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
K+ WN+++ ++ A +LF +M V+ D ++N+++ Y + D+++A
Sbjct: 274 KRNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEA-- 327
Query: 80 IHCYLIRSGFLYRLEVASIL-----VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
S + + +L + +S+ G L F +P K++I W+++IA
Sbjct: 328 -------SKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP--HKNLISWNSVIA 378
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD--EGLSLFQFMLKHHI 192
Y K+ + A+ LF++M G +P++ T +S+L + GLVD G + QF+ K +
Sbjct: 379 GYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTK-TV 435
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+P + +I + R G + DA ++ M + + W A++G H
Sbjct: 436 VPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFH 484
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 187/303 (61%), Gaps = 5/303 (1%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C G + ++ +F + K A WN +++GF N EA+ LF QM+ +QPD+ TF
Sbjct: 229 CKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFV 288
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
SL A A LA L + + I+ G L V++ LV +YSKCG + + F+ I
Sbjct: 289 SLFTACASLALLDEGRQTNALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQI--S 346
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
DI+ W+ IIAA+ +HG + A F+ MV +GV P+ +TF ++L AC G VDE ++
Sbjct: 347 HPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVN 406
Query: 183 LFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
LF M+ K+ I+P +HY+C++D++ RAG+L A +I+ MP + + ++WGA L C H
Sbjct: 407 LFDLMVHKYGILPRSEHYSCVVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLVGCNIH 466
Query: 242 ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
NV+LGE+AAR L+P N+G Y++++N+YAA G+W+DV ++R ++ E G++K A S
Sbjct: 467 SNVKLGELAARSILNLDPYNSGAYVMMSNIYAAAGKWKDVNRMRVLMKEQGIKKQTAYSW 526
Query: 302 VEV 304
+++
Sbjct: 527 MQI 529
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC +S F + S WN +++ F + L A F M+ V PD T
Sbjct: 328 MYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGIT 387
Query: 61 FNSLLPAYAILADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +LL A + + +N+ ++ + G L R E S +VD+ S+ G L A + +
Sbjct: 388 FLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEHYSCVVDVMSRAGQLLRACKVIQEM 447
Query: 120 PLKDKDIIIWSAIIAAYGKHGH---GEMA 145
P + D IW A + H + GE+A
Sbjct: 448 PF-EADASIWGAFLVGCNIHSNVKLGELA 475
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 107/238 (44%), Gaps = 28/238 (11%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
S +F K WN++++ I N +A F M ++V A++N+++ +
Sbjct: 79 SKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNV----ASYNAMMSGFVK 134
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC---GSLGYAHHIFNIIPLKDKDII 127
+ +++A + + R + ++++D Y K + A +F+ +P +++ +
Sbjct: 135 MGRVEEAKKVFEEIPRPNVVSY----TVMIDGYMKMEGGSGIKRARALFDAMPSRNE--V 188
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+ +I+ ++G E A +F M Q V V FT+++ G +DE +LFQ
Sbjct: 189 SWTVMISGLVENGLHEEAWEVFVRMPQKNV----VAFTAMITGFCKQGKIDEAWNLFQ-- 242
Query: 188 LKHHIIPLVDH--YTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVS 240
I D + +I + GR ++A NL M ++P+ + +L AC S
Sbjct: 243 ----QIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACAS 296
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 188/305 (61%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC+ + KMF + W+++L+G++ N L A+ LF+ + + D
Sbjct: 201 VYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFL 260
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S + A A LA L + +H +SGF + V S L+D+Y+KCG + A+ +F
Sbjct: 261 ISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEE 320
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ I++W+A+I+ +G+H A+ LF +M Q G+ P+ VT+ SVL+ACSH+GL ++G
Sbjct: 321 LRS--IVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQG 378
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M++ H++ P V HY+C++D+LGRAG + AY+LI MP ++WG+LL +C
Sbjct: 379 HKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFSATSSIWGSLLASCR 438
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N+E E+AA+ FE+EP+N GN++LLAN+YAA +W +V K R ++ + L+K
Sbjct: 439 IHGNIEFAEIAAKHLFEMEPDNAGNHVLLANIYAANKKWEEVAKTRKLLRDSELKKDRGT 498
Query: 300 SLVEV 304
S +E+
Sbjct: 499 SWIEI 503
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 13/300 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC+ + + +F + K WN ++ + +EA+ LF QML E + T
Sbjct: 100 MYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFT 159
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+L A + + M +H + I+ V + L+ +Y+KC S+ A +F +P
Sbjct: 160 ISSVLCECAFKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMP 219
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ + + WS+I+A Y ++G E A+ LF + G + + +S + AC+ + + EG
Sbjct: 220 --ETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEG 277
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG---- 236
+ K + + +ID+ + G + +AY + + ++ + +W A++
Sbjct: 278 KQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELR-SIVLWNAMISGFGR 336
Query: 237 -ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRD-MVNEVGLR 294
AC + ++ R F P++ Y+ + N + +G K D MV E LR
Sbjct: 337 HACALEAMILFEKMQQRGLF---PDDV-TYVSVLNACSHMGLHEQGHKYFDLMVREHNLR 392
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG 140
H I GF + +++L+++YSKC + A +F+ +P+ K ++ W+ +I A +
Sbjct: 79 HAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPV--KSVVSWNTMIGALTRIA 136
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
+ A+ LF +M++ G N+ T +SVL C+ + E + L F +K + T
Sbjct: 137 KEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQLHAFSIKVSVDSNCFVGT 196
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
++ + + + DA + +MP + N W ++L V
Sbjct: 197 ALLHVYAKCSSIKDASKMFESMP-ETNAVTWSSILAGYV 234
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 188/307 (61%), Gaps = 6/307 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKR-TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y KC +F + S++R WN+++SG++H+ + +A+ L M+ + D T
Sbjct: 587 YGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFT 646
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++L A A +A L++ M +H +R+ + V S LVD+Y+KCG + YA F ++P
Sbjct: 647 FATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMP 706
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+++ I W+++I+ Y +HGHG+ A+ +F M Q G P+ VTF VL ACSHVGLVDEG
Sbjct: 707 VRN--IYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEG 764
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC- 238
F+ M + + + P ++H++C++DLLGRAG + + I+TMP+ PN +W +LGAC
Sbjct: 765 YKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACC 824
Query: 239 -VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
+ N ELG+ AA+ ELEP+N NY+LL+N++AA G W DV + R + + ++K
Sbjct: 825 RANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDA 884
Query: 298 AQSLVEV 304
S V +
Sbjct: 885 GCSWVNM 891
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 3/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + +F K T WN+++SG HN EA+ F M + P N +
Sbjct: 383 MYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFS 442
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S L + + L L IH + G + V++ L+ +Y++ S+ +F +P
Sbjct: 443 VISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 502
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEM-AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ D + W++ I A K+ + A+ F EM+Q+G +PN+VTF ++L A S ++
Sbjct: 503 --EYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGL 560
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G + +LK+ + ++ G+ +++D + M + + W +++
Sbjct: 561 GHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 618
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 8 GNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNL + K+F + +K W+ ++SG+ N + EA LFK ++ + P++ S L
Sbjct: 72 GNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSAL 131
Query: 66 PAYAILAD--LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC-GSLGYAHHIFNIIPLK 122
A +K M IH ++ + + + ++++L+ +YS C GS+ AH +F+ I +
Sbjct: 132 RACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFR 191
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV----KPNQVTFTS-VLHACSHVGLV 177
+ + W++II+ Y + G A LF+ M GV +PN+ T S V ACS L
Sbjct: 192 NS--VTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACS---LA 246
Query: 178 DEGLSLFQFMLK--HHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
D GL L + ML L D Y + +++ R G +D A + + M + + G
Sbjct: 247 DCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGL 306
Query: 234 LLGACVSHENVELGEV 249
++G H+ E +V
Sbjct: 307 MVGLARQHQGEEAAKV 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S Y + L A ++H L ++GF + + L++IY + G+L A +F+ +P
Sbjct: 26 LDSEFDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMP 85
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL--VD 178
K+++ WS +I+ Y ++ + A SLF ++ SG+ PN S L AC G +
Sbjct: 86 --QKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIK 143
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGR----AGRLDDAYNLIRTMPIKPNHAVWGAL 234
G+ + F+ K +P V L+ +G +DDA+ + + + N W ++
Sbjct: 144 LGMQIHAFICK---LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFR-NSVTWNSI 199
Query: 235 L 235
+
Sbjct: 200 I 200
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ--- 55
MY+ C+ G++ ++++F + + + WN+++S + A A +LF M +E V+
Sbjct: 170 MYSDCS-GSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNL 228
Query: 56 -PDNATFNSLLPAYAILAD-----LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 109
P+ T SL+ A LAD L+Q + + +SGFL L V S LV+ +++ G +
Sbjct: 229 RPNEYTLCSLVTAACSLADCGLVLLEQMLT---RIEKSGFLRDLYVGSALVNGFARYGLM 285
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
A IF + D++ + + ++ + GE A +F EM + V+ N + +L
Sbjct: 286 DCAKMIFK--QMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLS 342
Query: 170 ACSHVGLVDEGLSLFQ----FMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPI 224
+ + EG Q ++ + ++ + ++++ G+ +D+A ++ + MP
Sbjct: 343 TFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPS 402
Query: 225 KPNHAVWGALLGACVSHENVE 245
K + W +++ +E E
Sbjct: 403 K-DTVSWNSMISGLDHNERFE 422
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + + F + WN+++SG+ + ++A+++F +M PD+ T
Sbjct: 688 MYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVT 747
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY----RLEVASILVDIYSKCGSLGYAHHIF 116
F +L A + + + + + G +Y R+E S +VD+ + G +
Sbjct: 748 FVGVLSACSHVGLVDEGYK---HFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFI 804
Query: 117 NIIPLKDKDIIIWSAIIAA 135
+P+ D +I+IW ++ A
Sbjct: 805 KTMPM-DPNILIWRTVLGA 822
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 187/312 (59%), Gaps = 11/312 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKR--------TAPWNAVLSGFIHNSLAREAIQLFKQMLVED 53
YA + +Y++F+K K W+AV+SGF ++++LF+QM +
Sbjct: 339 YADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAK 398
Query: 54 VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
V + T +S+L A LA L +H Y IR+ + V + LV++Y KCG AH
Sbjct: 399 VMANCVTISSVLSVCAELAALNLGRELHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAH 458
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
+F+ I K +D+I W+++I YG HG GE AV F+EM+ +G++P+++TF +VL ACSH
Sbjct: 459 LVFDNI--KGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSH 516
Query: 174 VGLVDEGLSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
GLV G +LF M+ I P V+HY C++DLLGRAG L +A++++R MPI+PN VWG
Sbjct: 517 AGLVAAGRNLFDRMVTEFSIEPTVEHYACMVDLLGRAGLLQEAHDIVRNMPIEPNECVWG 576
Query: 233 ALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVG 292
ALL +C + + +L E L+ E TG+++LL+N+YA G+ D +VR E G
Sbjct: 577 ALLNSCRMYRDTDLIEEIESRILALKSEITGSFMLLSNIYADSGKREDSARVRVSAKEKG 636
Query: 293 LRKLPAQSLVEV 304
+K+P QS +EV
Sbjct: 637 FKKIPGQSWIEV 648
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 42/227 (18%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + K+F + WN ++SG+ N A ++FK+M +E ++P+ T
Sbjct: 170 MYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVT 229
Query: 61 FNSLLPAYA--------------------------------ILADL---KQAMNIHCYLI 85
+ SLL ++A + AD+ ++ IH ++I
Sbjct: 230 WTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVI 289
Query: 86 RSGFLYRLEVASILVDIYSKC-GSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
+ G+ L V + L+ IY K LG AH IF+ I K+K ++ W+A+I++Y G +
Sbjct: 290 KGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDI--KNKSLVSWNALISSYADSGLCDD 347
Query: 145 AVSLFNEMVQSG----VKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
A +F ++ +S V+PN +++++V+ + G +++ L LF+ M
Sbjct: 348 AYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQM 394
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAP--WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
Y++ N + + K+F T + + WN+++ + + A++++ QM+ PD
Sbjct: 68 YSRFNSISEARKIFTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMMKFGFLPDGF 127
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T ++ + + + + +HC+++ +GF + V + LV +Y K + A +F+ +
Sbjct: 128 TLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGM 187
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ ++ W+ +++ Y + A +F M G++PN VT+TS+L + + GL DE
Sbjct: 188 VVRS--VLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDE 245
Query: 180 GLSLFQFM 187
+ LF+ M
Sbjct: 246 TMELFKVM 253
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 19/212 (8%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L+QA IH LI + + +++ L+ YS+ S+ A IF P + ++W++II
Sbjct: 39 LQQARQIHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSNLVWNSII 98
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS------LFQFM 187
A HG+ AV ++++M++ G P+ T ++ +CS +G V GL + +
Sbjct: 99 RANVSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSV--GLCKIVHCHVLETG 156
Query: 188 LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GACVSHENVEL 246
K+H+ + + ++ + G+ R++DA + M ++ + W L+ G + + V
Sbjct: 157 FKNHVHVVNE----LVGMYGKVRRMEDACKVFDGMVVRSVLS-WNTLVSGYAFNFDYVGA 211
Query: 247 GEVAARWTFE-LEPENTGNYILLANLYAAVGR 277
V R E LEP NY+ +L ++ R
Sbjct: 212 FRVFKRMELEGLEP----NYVTWTSLLSSHAR 239
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++ +F + WN+++ G+ + L A++ F +M+ ++PD T
Sbjct: 447 MYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKIT 506
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F ++L A + + N+ ++ + +E + +VD+ + G L AH I +
Sbjct: 507 FVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYACMVDLLGRAGLLQEAHDIVRNM 566
Query: 120 PLKDKDIIIWSAII 133
P++ + +W A++
Sbjct: 567 PIEPNE-CVWGALL 579
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 186/306 (60%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC ++ +F T K WN+V+SG+ + A EA+ LF +M +E PD T
Sbjct: 385 MYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVT 444
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNII 119
+L A A + + +++H + ++ G + + V + L++ Y+KCG A +F+
Sbjct: 445 VVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFD-- 502
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ +K+ + W+A+I G G G +++LF +M++ + PN+V FT++L ACSH G+V+E
Sbjct: 503 GMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEE 562
Query: 180 GLSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GL +F FM K + +P + HY C++DLL RAG L +A + I MP++P V+GA L C
Sbjct: 563 GLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGC 622
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H N + GEVA R EL P+ Y+L++NLYA+ GRW V++VR+M+ + GL K+P
Sbjct: 623 GLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPG 682
Query: 299 QSLVEV 304
SLVE+
Sbjct: 683 VSLVEM 688
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 7/259 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W A++ G+ + A++LF + P++ T SLL A A L ++ +H ++
Sbjct: 310 WTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVV 369
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ G L + + LVD+Y+KCG + AH++F DKD++ W+++I+ Y + G A
Sbjct: 370 KYG-LDDTSLRNSLVDMYAKCGLIPDAHYVFATT--VDKDVVSWNSVISGYAQSGSAYEA 426
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY-TCIID 204
+ LFN M P+ VT VL AC+ VG GLSL F LK+ ++ + T +++
Sbjct: 427 LDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLN 486
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
+ G A + M K N W A++G C + +G +A + L+ E N
Sbjct: 487 FYAKCGDATSARMVFDGMGEK-NAVTWAAMIGGC-GMQGDGVGSLAL-FRDMLKEELVPN 543
Query: 265 YILLANLYAAVGRWRDVEK 283
++ L AA VE+
Sbjct: 544 EVVFTTLLAACSHSGMVEE 562
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 110/224 (49%), Gaps = 5/224 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+KC + K+F + + W +++ ++ N A E + LF +M + + T
Sbjct: 179 YSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTV 238
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
SL+ A L L Q +H Y+I++G +A+ L+++Y KCG +G A +F+ +
Sbjct: 239 GSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSV 298
Query: 122 KD----KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
D++ W+A+I Y + G+ + A+ LF + + PN VT S+L AC+ + +
Sbjct: 299 STCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENI 358
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
G L ++K+ + ++D+ + G + DA+ + T
Sbjct: 359 VMGKLLHVLVVKYGLDD-TSLRNSLVDMYAKCGLIPDAHYVFAT 401
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 56/290 (19%)
Query: 37 SLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA 96
+LAR + F ++V F+ LL + L D+ +HC +++S +
Sbjct: 123 NLARTTLGSFNDLVV---------FSILLKTASQLRDIVLTTKLHCNILKSNAADSFVLT 173
Query: 97 SILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
S LVD YSKCG L A +F+ IP D+ ++ W+++I AY ++ E + LFN M +
Sbjct: 174 S-LVDAYSKCGKLRDARKVFDEIP--DRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGF 230
Query: 157 VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDD 214
+ N T S++ AC+ +G + +G + +++K+ I ++ Y T ++++ + G + D
Sbjct: 231 LDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGI--EINSYLATSLLNMYVKCGDIGD 288
Query: 215 AYNLI--------------------------RTMP--------------IKPNHAVWGAL 234
A ++ R P I PN +L
Sbjct: 289 ARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASL 348
Query: 235 LGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKV 284
L AC EN+ +G++ + ++T L ++YA G D V
Sbjct: 349 LSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPDAHYV 398
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 176/284 (61%), Gaps = 3/284 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ F K WN+V++G+ N + AI+LF QM ++ +PD T +S+L L
Sbjct: 286 EFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLV 345
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DL IH ++ ++ + L + + L+ +YS+CG +G A H+FN + L KD+I W+A+
Sbjct: 346 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLY-KDVITWNAM 403
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I Y HG A+ LF M ++P +TF SVL+AC+H GLV+EG F M+ +
Sbjct: 404 IGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYG 463
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P V+H+ ++D+LGR G+L +A +LI MP+KP+ AVWGALLGAC H NV+L +VAA
Sbjct: 464 IEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAA 523
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
+ LEPE++ Y LL NLYA +G+W D E+VR ++ E ++K
Sbjct: 524 KALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKK 567
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
K+ WN+++ ++ A +LF +M V+ D ++N+++ Y + D+++A
Sbjct: 200 KRNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEA-- 253
Query: 80 IHCYLIRSGFLYRLEVASIL-----VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
S + + +L + +S+ G L F +P K++I W+++IA
Sbjct: 254 -------SKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP--HKNLISWNSVIA 304
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD--EGLSLFQFMLKHHI 192
Y K+ + A+ LF++M G +P++ T +S+L + GLVD G + QF+ K +
Sbjct: 305 GYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTK-TV 361
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+P + +I + R G + DA ++ M + + W A++G H
Sbjct: 362 VPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFH 410
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 177/293 (60%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F +++ W A+++G+ + + + +M + + +TF L A +A
Sbjct: 317 ELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMA 376
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L +H +++G+ V + L+++Y KCGS+G A+ +F + LKD II W+ +
Sbjct: 377 ALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKD--IISWNTM 434
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
+A Y +HG G A+ +F+ M +G KP+++T VL ACSH GL D G F M K +
Sbjct: 435 LAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYG 494
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P HY C+IDLLGRAG L++A+NL+R MP +P+ A WGALLGA H N ELGE AA
Sbjct: 495 ITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGEKAA 554
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
F +EP N G Y+LL+NLYA +G+W DV K+R + ++G++K+P S VEV
Sbjct: 555 EMVFNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEV 607
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 19/224 (8%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F +K WN +LSG++ + EA +F M + D+ ++N LL Y
Sbjct: 101 LFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYK----DSISWNGLLAVYVQNGR 156
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L++A L S + L + L+ Y K LG A +F+ +P+++ I W+ +I
Sbjct: 157 LEEARR----LFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNA--ISWNTMI 210
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
+ Y + G A LF E S V+ + T+T+++ A G++DE +F M +
Sbjct: 211 SGYARDGDLLQARRLFEE---SPVR-DVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREM 266
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
Y +I + ++D A L MP + N W ++
Sbjct: 267 A----YNVMIAGYVQYKKMDMARELFEAMPCR-NVGSWNTIISG 305
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC +Y +F + K WN +L+G+ + R+A+ +F M +PD T
Sbjct: 406 MYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEIT 465
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+L A + + + + G + + ++D+ + G L AH++ +
Sbjct: 466 MVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNM 525
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P + D W A++ A HG+ E+
Sbjct: 526 PF-EPDAATWGALLGASRIHGNAELG 550
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 186/305 (60%), Gaps = 4/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC + + F +T +K W+A+++G+ N+ +E+++LF +M+ V P T
Sbjct: 321 YAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTL 380
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A L L IH Y + + + + + +VD+Y+KCGS+ A +F+ +P
Sbjct: 381 VSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP 440
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++I W+ +IA Y +G + A+++F++M G +PN +TF S+L ACSH GL+ EG
Sbjct: 441 --ERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEG 498
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M K+ I P HY C++DLLGR G L++AY LI MP++P A WGALL AC
Sbjct: 499 REYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACR 558
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H NVEL ++A L+PE++G Y+LLAN A +W DV +VR ++ + G++K+P
Sbjct: 559 MHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGY 618
Query: 300 SLVEV 304
SL+E+
Sbjct: 619 SLIEI 623
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 35/257 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F ++S K W ++ G+ + + EA+++F+ ML+ V+P+ T +++ A + +
Sbjct: 200 QVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMG 259
Query: 73 DLKQAMNIH--------------------------CYLIRSGFLYRLEVASI-----LVD 101
+L+ +H C + R+ + +V+
Sbjct: 260 NLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVN 319
Query: 102 IYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
Y+KCG L A F+ P K+ + WSA+IA Y ++ + ++ LF+EM++ GV P +
Sbjct: 320 GYAKCGDLESARRFFDQTP--RKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIE 377
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIR 220
T SVL AC + ++ G + Q+ + IIPL V I+D+ + G +D A +
Sbjct: 378 HTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFS 437
Query: 221 TMPIKPNHAVWGALLGA 237
TMP + N W ++
Sbjct: 438 TMPER-NLISWNTMIAG 453
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 9/258 (3%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
G+L Y +F + + T WN ++ G+ + A F M V+ D+ +F L
Sbjct: 92 GDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFAL 151
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A + + +++C + + GF L V + L+ Y++ G L A +F+ DKD
Sbjct: 152 KACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFD--ESSDKD 209
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
++ W+ +I Y H E A+ +F M+ S V+PN+VT +V+ ACS +G ++ G + +
Sbjct: 210 VVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHE 269
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
+ + ++ + + ++D+ + L DA L M K ++ W +++ ++E
Sbjct: 270 KVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYS-WTSMVNGYAKCGDLE 328
Query: 246 LGEVAARWTFELEPENTG 263
+AR F+ P
Sbjct: 329 ----SARRFFDQTPRKNA 342
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + ++F ++ WN +++G+ N A++AI +F QM +P+N T
Sbjct: 422 MYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNIT 481
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F SLL A + + + + R G + +VD+ + G L A+ + +
Sbjct: 482 FVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANM 541
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P++ + W A++ A HG+ E+A
Sbjct: 542 PMQPCE-AAWGALLNACRMHGNVELA 566
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 186/305 (60%), Gaps = 4/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC + + F +T +K W+A+++G+ N+ +E+++LF +M+ V P T
Sbjct: 271 YAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTL 330
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A L L IH Y + + + + + +VD+Y+KCGS+ A +F+ +P
Sbjct: 331 VSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP 390
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++I W+ +IA Y +G + A+++F++M G +PN +TF S+L ACSH GL+ EG
Sbjct: 391 --ERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEG 448
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M K+ I P HY C++DLLGR G L++AY LI MP++P A WGALL AC
Sbjct: 449 REYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACR 508
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H NVEL ++A L+PE++G Y+LLAN A +W DV +VR ++ + G++K+P
Sbjct: 509 MHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGY 568
Query: 300 SLVEV 304
SL+E+
Sbjct: 569 SLIEI 573
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 35/257 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F ++S K W ++ G+ + + EA+++F+ ML+ V+P+ T +++ A + +
Sbjct: 150 QVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMG 209
Query: 73 DLKQAMNIH--------------------------CYLIRSGFLYRLEVASI-----LVD 101
+L+ +H C + R+ + +V+
Sbjct: 210 NLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVN 269
Query: 102 IYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
Y+KCG L A F+ P K+ + WSA+IA Y ++ + ++ LF+EM++ GV P +
Sbjct: 270 GYAKCGDLESARRFFDQTP--RKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIE 327
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIR 220
T SVL AC + ++ G + Q+ + IIPL V I+D+ + G +D A +
Sbjct: 328 HTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFS 387
Query: 221 TMPIKPNHAVWGALLGA 237
TMP + N W ++
Sbjct: 388 TMPER-NLISWNTMIAG 403
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 9/258 (3%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
G+L Y +F + + T WN ++ G+ + A F M V+ D+ +F L
Sbjct: 42 GDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFAL 101
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A + + +++C + + GF L V + L+ Y++ G L A +F+ DKD
Sbjct: 102 KACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFD--ESSDKD 159
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
++ W+ +I Y H E A+ +F M+ S V+PN+VT +V+ ACS +G ++ G + +
Sbjct: 160 VVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHE 219
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
+ + ++ + + ++D+ + L DA L M K ++ W +++ ++E
Sbjct: 220 KVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYS-WTSMVNGYAKCGDLE 278
Query: 246 LGEVAARWTFELEPENTG 263
+AR F+ P
Sbjct: 279 ----SARRFFDQTPRKNA 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + ++F ++ WN +++G+ N A++AI +F QM +P+N T
Sbjct: 372 MYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNIT 431
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F SLL A + + + + R G + +VD+ + G L A+ + +
Sbjct: 432 FVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANM 491
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P++ + W A++ A HG+ E+A
Sbjct: 492 PMQPCE-AAWGALLNACRMHGNVELA 516
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 181/305 (59%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+ + ++ T WN+++SGF A+ F +ML V PDN T
Sbjct: 517 MYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFT 576
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++L A LA ++ IH +++ + +AS +VD+YSKCG++ + +F P
Sbjct: 577 YATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP 636
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D + WSA+I AY HG GE A+ LF EM VKPN F SVL AC+H+G VD+G
Sbjct: 637 --KRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG 694
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F+ M H+ + P ++HY+C++DLLGR+G++++A LI +MP + + +W LLG C
Sbjct: 695 LHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICR 754
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
NVE+ E AA +L+P+++ Y+LL+N+YA G W +V K+R + L+K P
Sbjct: 755 LQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGC 814
Query: 300 SLVEV 304
S ++V
Sbjct: 815 SWIQV 819
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 146/298 (48%), Gaps = 11/298 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F K WNA+++ N E + LF ML ++PD+ T
Sbjct: 416 MYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYT 475
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A A L M +H +I+SG V S ++D+Y KCG L A I
Sbjct: 476 FGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHE--R 533
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+++ + W++II+ + GE A+S F+ M+Q GV P+ T+ +VL C+++ V+ G
Sbjct: 534 LEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELG 593
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +LK + V + I+D+ + G + D+ + P K ++ W A++ A
Sbjct: 594 KQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAY 652
Query: 241 HENVELGEVAARWTFELEPENTG-NYILLANLYAAVGRWRDVEK----VRDMVNEVGL 293
H LGE A + E++ +N N+ + ++ A V+K R+M + GL
Sbjct: 653 H---GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGL 707
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 19/237 (8%)
Query: 8 GNLSYKMFMKTS--KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GN+ + F+ S ++ WN++LS ++ N R++I++F +M + ++Q D ATF +L
Sbjct: 118 GNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVL 177
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A + D + +HC I+ GF + + LVD+YS C L +A +IF +P +++
Sbjct: 178 KACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMP--ERN 235
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ WSA+IA Y ++ + L+ M+ G+ +Q TF S +C+ GLS F+
Sbjct: 236 SVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA-------GLSAFE 288
Query: 186 FMLKHHIIPLVDHY-------TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ H L ++ T +D+ + R+ DA + T P P AL+
Sbjct: 289 LGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP-NPTRQSHNALI 344
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C + ++ +F + ++ + W+AV++G++ N E ++L+K ML E + AT
Sbjct: 214 MYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQAT 273
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S + A L+ + +H Y +++ F Y V + +D+Y+KC + A +FN P
Sbjct: 274 FASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +A+I Y + A+ +F + +S + ++++ + L ACS + EG
Sbjct: 334 NPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ L +K + + I+D+ + G L +A + M IK + W A++ A
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHEQ 450
Query: 241 HENVE 245
+E+VE
Sbjct: 451 NEHVE 455
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 95/217 (43%), Gaps = 30/217 (13%)
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF+ + + L + H + +GF+ + V++ L+ Y KC +L YA ++F+ +
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 120 PLKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFN 150
P +D +D++ W+++++ Y ++G ++ +F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAG 210
+M ++ + TF VL AC+ + GL + ++ V T ++D+
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 211 RLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
+LD A+N+ MP + N W A++ V ++ G
Sbjct: 220 KLDHAFNIFCEMP-ERNSVCWSAVIAGYVRNDRFTEG 255
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 181/305 (59%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+ + ++ T WN+++SGF A+ F +ML V PDN T
Sbjct: 517 MYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFT 576
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++L A LA ++ IH +++ + +AS +VD+YSKCG++ + +F P
Sbjct: 577 YATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP 636
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D + WSA+I AY HG GE A+ LF EM VKPN F SVL AC+H+G VD+G
Sbjct: 637 --KRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG 694
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F+ M H+ + P ++HY+C++DLLGR+G++++A LI +MP + + +W LLG C
Sbjct: 695 LHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICR 754
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
NVE+ E AA +L+P+++ Y+LL+N+YA G W +V K+R + L+K P
Sbjct: 755 LQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGC 814
Query: 300 SLVEV 304
S ++V
Sbjct: 815 SWIQV 819
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 146/298 (48%), Gaps = 11/298 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F K WNA+++ N E + LF ML ++PD+ T
Sbjct: 416 MYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYT 475
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A A L M +H +I+SG V S ++D+Y KCG L A I
Sbjct: 476 FGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHE--R 533
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+++ + W++II+ + GE A+S F+ M+Q GV P+ T+ +VL C+++ V+ G
Sbjct: 534 LEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELG 593
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +LK + V + I+D+ + G + D+ + P K ++ W A++ A
Sbjct: 594 KQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAY 652
Query: 241 HENVELGEVAARWTFELEPENTG-NYILLANLYAAVGRWRDVEK----VRDMVNEVGL 293
H LGE A + E++ +N N+ + ++ A V+K R+M + GL
Sbjct: 653 H---GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGL 707
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 19/237 (8%)
Query: 8 GNLSYKMFMKTS--KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GN+ + F+ S ++ WN++LS ++ N R++I++F +M + ++Q D ATF +L
Sbjct: 118 GNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVL 177
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A + D + +HC I+ GF + + LVD+YS C L +A +IF +P +++
Sbjct: 178 KACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMP--ERN 235
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ WSA+IA Y ++ + L+ M+ G+ +Q TF S +C+ GLS F+
Sbjct: 236 SVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA-------GLSAFE 288
Query: 186 FMLKHHIIPLVDHY-------TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ H L ++ T +D+ + R+ DA + T P P AL+
Sbjct: 289 LGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP-NPTRQSHNALI 344
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C + ++ +F + ++ + W+AV++G++ N E ++L+K ML E + AT
Sbjct: 214 MYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQAT 273
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S + A L+ + +H Y +++ F Y V + +D+Y+KC + A +FN P
Sbjct: 274 FASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +A+I Y + A+ +F + +S + ++++ + L ACS + EG
Sbjct: 334 NPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ L +K + + I+D+ + G L +A + M IK + W A++ A
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHEQ 450
Query: 241 HENVE 245
+E+VE
Sbjct: 451 NEHVE 455
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 95/217 (43%), Gaps = 30/217 (13%)
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF+ + + L + H + +GF+ + V++ L+ Y KC +L YA ++F+ +
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 120 PLKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFN 150
P +D +D++ W+++++ Y ++G ++ +F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAG 210
+M ++ + TF VL AC+ + GL + ++ V T ++D+
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 211 RLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
+LD A+N+ MP + N W A++ V ++ G
Sbjct: 220 KLDHAFNIFCEMP-ERNSVCWSAVIAGYVRNDRFTEG 255
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 184/305 (60%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+C S +F + K WNA++SGF EA+ LF +M E T
Sbjct: 239 MYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFT 298
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++LL + + L+Q +H ++++SG V + L+ +Y+K G++ A +F+
Sbjct: 299 YSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFD--R 356
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVDE 179
L D++ ++++ Y +HG G+ AV LF EM + ++PN +TF SVL ACSH GL+DE
Sbjct: 357 LVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDE 416
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
GL F+ M K+ + P + HYT ++DL GRAG LD A + I MPI+PN +WGALLGA
Sbjct: 417 GLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASK 476
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+N E+G AA+ EL+P G + LL+N+YA+ G+W+DV KVR + + GL+K PA
Sbjct: 477 MHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPAC 536
Query: 300 SLVEV 304
S VE+
Sbjct: 537 SWVEI 541
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHN---SLAREAIQLFKQMLVEDVQPD 57
MYAKC ++ ++F + K W ++++G+ + S A A+ LF +M+ + ++P+
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPN 194
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
+SL+ L IH + GF + V S LVD+Y++CG L + +F+
Sbjct: 195 EFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFD 254
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
L+ K+ + W+A+I+ + + G GE A+ LF +M + G + T++++L + S G +
Sbjct: 255 --ELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSL 312
Query: 178 DEGLSLFQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
++G L M+K ++ V + ++ + ++G + DA + + +K + ++L
Sbjct: 313 EQGKWLHAHMMKSGKKLVGYVGN--TLLHMYAKSGNICDAKKVFDRL-VKVDVVSCNSML 369
Query: 236 GACVSH----ENVELGEVAARWTFELEPEN 261
H E VEL E W E+EP +
Sbjct: 370 IGYAQHGLGKEAVELFEEMMLWV-EIEPND 398
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 54 VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
++PD +N LL +L LKQ +H +L+ S F L + + ++ +Y+KCGSL A
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVS---LFNEMVQSGVKPNQVTFTSVLHA 170
+F+ + + KD++ W+++I Y + G+ A + LF EMV+ G++PN+ +S++
Sbjct: 147 QVFDEMCV--KDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKC 204
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
C +G +G + K+ V + ++D+ R G L ++ + + K N
Sbjct: 205 CGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK-NEVS 263
Query: 231 WGALLGA 237
W AL+
Sbjct: 264 WNALISG 270
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 191/310 (61%), Gaps = 8/310 (2%)
Query: 1 MYAKCNCGNLSYKMFMK--TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYAK + +F + +S + A WNA+++G+ N L +AI L KQMLV++V P+
Sbjct: 469 MYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNA 528
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T S+LPA + + + A +H + IR + V + L D YSKCG++ YA ++F
Sbjct: 529 VTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLR 588
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
P +K+ + ++ ++ YG+HG G+ A++L++ M++SG++P+ VTF ++L AC++ GLVD
Sbjct: 589 TP--EKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVD 646
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH-AVWGALLG 236
EGL +F+ M K H I P ++HY C+ D+LGR GR+ +AY ++ + N +WG+LLG
Sbjct: 647 EGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLG 706
Query: 237 ACVSHENVELGEVAAR--WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
+C +H + ELG+ A+ ++ G ++LL+N+YA G W V++VR + E GL
Sbjct: 707 SCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLH 766
Query: 295 KLPAQSLVEV 304
K S VE+
Sbjct: 767 KETGCSWVEI 776
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++CN + S K+F K ++ WN ++S F+ N EA+ L +M + D+ T
Sbjct: 369 MYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVT 428
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LL A + L +L H YLIR G + + S L+D+Y+K GS+ A +F
Sbjct: 429 ATALLSAASNLRNLYVGKQTHAYLIRRGIQFE-GMESYLIDMYAKSGSIRTAELLFEQNC 487
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+D W+AIIA Y ++G E A+ L +M+ V PN VT S+L ACS +G +
Sbjct: 488 SSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLA 547
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
L F ++ + V T + D + G + A N+ P K
Sbjct: 548 RQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEK 592
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP--DNATFNSLLPAYAILADLKQA 77
+ T WN+V+ GFI N+L +A+ L+ +M D TF+S L A A+ D+
Sbjct: 77 RPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTG 136
Query: 78 MNIHCYLIRSGFLYRLEVASI----LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
IH + +RS + I L+++Y+ C YA ++F++ ++ ++++ W+ +I
Sbjct: 137 KAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDV--MRRRNVVAWNTLI 193
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
++ K AV F M+ V P+ VTF ++ A S +G + FM K
Sbjct: 194 LSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQ 253
Query: 194 PLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ D + + I + G +D A ++ + N +W ++ A V +
Sbjct: 254 YVSDVFVVSSAILMFSDVGCMDYA-RMVFDRCLNKNTEIWNTMIVAYVQN 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 113/245 (46%), Gaps = 9/245 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA C + +F ++ WN ++ F+ + +A++ F M+ + V P T
Sbjct: 165 MYASCQ-HEYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVT 223
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSG--FLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F +L PA + L D + + ++ + G ++ + V S + ++S G + YA +F+
Sbjct: 224 FVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFD- 282
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS--GVKPNQVTFTSVLHACSHVGL 176
+K+ IW+ +I AY ++ A+ +F + ++S GV + VT SVL A S +
Sbjct: 283 -RCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGV-CDDVTLLSVLTAVSQLQQ 340
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+ F++K L+ ++ + R +D + + M ++ + W ++
Sbjct: 341 IKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKM-LERDAVSWNTIIS 399
Query: 237 ACVSH 241
A V +
Sbjct: 400 AFVQN 404
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 181/304 (59%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + +F + ++ W+A++SG+ + +EA++LF +ML + PD T
Sbjct: 298 YAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITM 357
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S++ A + + L QA IH Y+ RSGF L V + L+D+Y+KCG+L A +F +P
Sbjct: 358 LSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMP- 416
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K++I WS++I A+ HG+ + A+ LF M + ++PN VTF VL+AC H GLV+EG
Sbjct: 417 -RKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGE 475
Query: 182 SLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
LF M+ H I P +HY C++DL RA L A LI TMP PN +WG+L+ AC
Sbjct: 476 KLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQV 535
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H ELGE AA+ ELEP++ G ++L+N+YA RW DV +R ++ G+ K A S
Sbjct: 536 HGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASS 595
Query: 301 LVEV 304
+E+
Sbjct: 596 RIEI 599
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 34/325 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA C + +F K WN ++ G+ N +A++LF+ M D++PD+
Sbjct: 165 MYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVI 224
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++L A +L IH ++ +G+ + + L+++Y+ CG++ A I++ +
Sbjct: 225 LCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLS 284
Query: 121 LK-----------------------------DKDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
K ++D++ WSA+I+ Y + + A+ LF+E
Sbjct: 285 SKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDE 344
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
M+Q P+Q+T SV+ ACSHVG + + + ++ + + +ID+ + G
Sbjct: 345 MLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGN 404
Query: 212 LDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANL 271
L A + MP K N W +++ A H N + R E+ E G + L
Sbjct: 405 LVKAREVFENMPRK-NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG-VTFIGVL 462
Query: 272 YAA--VGRWRDVEKV-RDMVNEVGL 293
YA G + EK+ M+NE G+
Sbjct: 463 YACGHAGLVEEGEKLFSSMINEHGI 487
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPDNATFNSLLPAYAILA 72
+F + T N +L +S + I L+ + + D +F SLL A + ++
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ IH + GF+ + + L+ +Y+ C + A +F+ + D + W+ I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFD--KMCHPDAVAWNMI 193
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I Y ++GH + A+ LF +M S +KP+ V +VL AC H G + G ++ +F +K +
Sbjct: 194 IDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEF-VKDNG 252
Query: 193 IPLVDH-YTCIIDLLGRAGRLD 213
+ H T +I++ G +D
Sbjct: 253 YAIDSHLQTALINMYANCGAMD 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYAKC GNL + ++F +K W+++++ F + A AI+LF++M +++P+
Sbjct: 398 MYAKC--GNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG 455
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
TF +L A +++ + +I G E +VD+Y + L A +
Sbjct: 456 VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIE 515
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P ++IIW ++++A HG E+
Sbjct: 516 TMPFA-PNVIIWGSLMSACQVHGEAELG 542
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 172/280 (61%), Gaps = 3/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W+ V+ G + NS EA+++F++M +PD T S+L A ++ L+ IHCY+
Sbjct: 548 WSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVF 607
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R + L + LVD+Y+KCG L + ++F+++P+KD + W+ +I A G HG+G+ A
Sbjct: 608 RHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKD--VFSWNTMIFANGMHGNGKEA 665
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII-PLVDHYTCIID 204
+SLF +M+ S VKP+ TFT VL ACSH LV+EG+ +F M + H++ P +HYTC++D
Sbjct: 666 LSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVD 725
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
+ RAG L++AY I+ MP++P W A L C ++NVEL +++A+ FE++P + N
Sbjct: 726 IYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSAN 785
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
Y+ L N+ W + K+R ++ E G+ K P S V
Sbjct: 786 YVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHV 825
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 125/233 (53%), Gaps = 3/233 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC C + ++F + WN++ + +++ ++ + +F++M + V+ + T
Sbjct: 85 YGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTV 144
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S+LP + L DLK IH +++R G + + V+S V+ Y+KC + A +F+++P
Sbjct: 145 SSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMP- 203
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+D++ W+++ + Y G + +++F EMV GVKP+ VT + +L ACS + + G
Sbjct: 204 -HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
++ F LKH ++ V +++L + +A + MP + N W +L
Sbjct: 263 AIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHR-NVITWNSL 314
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 131/247 (53%), Gaps = 3/247 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y C C + +F + WN++ S +++ ++ + +F++M + V+PD
Sbjct: 286 LYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMA 345
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+LPA + L DLK IH + ++ G + + V + LV++Y+ C + A +F+++P
Sbjct: 346 MSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++ W+++ + Y G + +++F EMV +GVKP+ VT S+LHACS + + G
Sbjct: 406 --HRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG 463
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ F ++H ++ V ++ L + + +A + +P + A W +L A +
Sbjct: 464 KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHR-EVASWNGILTAYFT 522
Query: 241 HENVELG 247
++ E G
Sbjct: 523 NKEYEKG 529
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 127/234 (54%), Gaps = 3/234 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
YAKC C + +F + WN++ S +++ ++ + +F++M+++ V+PD T
Sbjct: 185 FYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVT 244
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L A + L DLK IH + ++ G + + V++ LV++Y C + A +F+++P
Sbjct: 245 VSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP 304
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+++I W+++ + Y G + +++F EM +GVKP+ + +S+L ACS + + G
Sbjct: 305 --HRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG 362
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
++ F +KH ++ V T +++L + +A + MP + N W +L
Sbjct: 363 KTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSL 415
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 34/276 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA C C + +F + WN++ S +++ ++ + +F++M++ V+PD T
Sbjct: 387 LYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT 446
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + L DLK IH + +R G + + V + L+ +Y+KC + A +F++IP
Sbjct: 447 MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506
Query: 121 LKD---------------------------------KDIIIWSAIIAAYGKHGHGEMAVS 147
++ D I WS +I K+ E A+
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAME 566
Query: 148 LFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLG 207
+F +M G KP++ T S+L ACS + G + ++ +H + ++D+
Sbjct: 567 IFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYA 626
Query: 208 RAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
+ G L + N+ MPIK + W ++ A H N
Sbjct: 627 KCGGLSLSRNVFDMMPIKDVFS-WNTMIFANGMHGN 661
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 103/221 (46%), Gaps = 10/221 (4%)
Query: 16 MKTS--KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
M+TS K+ +P S I + L EAI+++ ++PD F ++ A A D
Sbjct: 1 METSIKNKKKSP-----SFGIPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRD 55
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+ H R G + + + + + Y KC + A +F+ L +D++ W+++
Sbjct: 56 ALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFD--DLVARDVVTWNSLS 113
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
A Y G + +++F +M + VK N +T +S+L CS + + G + F+++H ++
Sbjct: 114 ACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMV 173
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
V + ++ + + +A + MP + + W +L
Sbjct: 174 EDVFVSSAFVNFYAKCLCVREAQTVFDLMPHR-DVVTWNSL 213
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC +LS +F K WN ++ + +EA+ LF++ML+ V+PD+AT
Sbjct: 624 MYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSAT 683
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + +++ + I + R + E + +VDIYS+ G L A+ +
Sbjct: 684 FTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRM 743
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P+ + I W A +A + + E+A
Sbjct: 744 PM-EPTAIAWKAFLAGCRVYKNVELA 768
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 183/306 (59%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + +F K+ W A+L G N A A++LF +M E+V ++ T
Sbjct: 384 MYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVT 443
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NII 119
SL+ A L LK+ ++H +LIR G+ + S L+D+Y+KCG + A +F N
Sbjct: 444 LVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGF 503
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
LKD +I+ +++I YG HG G A+ +++ M+ +KPNQ TF S+L ACSH GLV+E
Sbjct: 504 HLKD--VILCNSMIMGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEE 561
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G +LF M + H+I P HY C +DLL RAG L++AY L++ +P++P+ V ALLG C
Sbjct: 562 GRTLFHCMERVHNIKPSDKHYACFVDLLSRAGYLEEAYALVKQIPVEPSIDVLEALLGGC 621
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N+ +G A L+ NTG Y++L+N+Y+ RW V +R ++ + GL+K PA
Sbjct: 622 RIHKNINMGIQIADRLISLDYLNTGIYVMLSNIYSEARRWESVNYIRGLMRKRGLKKTPA 681
Query: 299 QSLVEV 304
SL EV
Sbjct: 682 FSLTEV 687
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 118/216 (54%), Gaps = 4/216 (1%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
CN G+ ++ +F + + WNA++SG + N + E+ LF +++ D+ T
Sbjct: 285 CNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLV 344
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
SL+ + +DL+ +H +IR G L +++ +VD+YSKCG++ A +F ++
Sbjct: 345 SLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFR--TME 402
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
+++I W+A++ ++G+ E A+ LF M + V N VT S++H C+H+G + +G S
Sbjct: 403 KRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRS 462
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
+ +++H + + +ID+ + G++ A L
Sbjct: 463 VHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKL 498
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 3/233 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N +YK+F + + T NA++ GF+ N +E +LFK M + D++ ++ T L A
Sbjct: 89 NYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKAC 148
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+L D + M + +R GF V S +++ KCG+L A +F+ +P ++D++
Sbjct: 149 TVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMP--ERDVVC 206
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W++II Y + G + + LF EM+ G++P+ VT S+L AC G G + F+L
Sbjct: 207 WNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVL 266
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ V T ++D+ G + A+ + M + + W A++ CV +
Sbjct: 267 ALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSR-SLISWNAMISGCVQN 318
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 9/284 (3%)
Query: 7 CGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
CGNL + +F ++ WN+++ G++ L +E IQLF +M+ ++P + T S+
Sbjct: 186 CGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASI 245
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A K +H +++ G + V + LVD+Y G A +FN + +
Sbjct: 246 LKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFN--RMCSR 303
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+I W+A+I+ ++G + SLF+++VQSG + T S++ CS ++ G L
Sbjct: 304 SLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLH 363
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
+++ + + T I+D+ + G + A ++ RTM K N W A+L V
Sbjct: 364 ACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTME-KRNVITWTAML---VGLSQN 419
Query: 245 ELGEVAARWTFELEPENT-GNYILLANLYAAVGRWRDVEKVRDM 287
E A + ++ EN N + L +L ++K R +
Sbjct: 420 GYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSV 463
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 55 QPDNATFNSLLPAYA-ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
QP ++ F+SLL ++ L D+K +IH +IR+ + +A+ L+ IYS G L YA+
Sbjct: 37 QP-SSIFSSLLREFSNTLIDVK---SIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAY 92
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
+F+ P ++ I+ +A++ + K+ + LF M ++ N T L AC+
Sbjct: 93 KVFDQCP--HRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKACT- 149
Query: 174 VGLVDE-GLSLFQFMLKH--HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
V L DE G+ L + ++ H+ P V + +I+ L + G L+DA + MP + +
Sbjct: 150 VLLDDEVGMELVRMAVRKGFHLHPHVG--SSMINFLVKCGNLNDARMVFDGMP-ERDVVC 206
Query: 231 WGALLGACV 239
W +++G V
Sbjct: 207 WNSIIGGYV 215
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 188/306 (61%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC + +F K T WN ++SG++ +A++LF +M V+PD T
Sbjct: 352 LYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAIT 411
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L A + LA L++ IH ++ V L+D+Y+KCG++ A +F +P
Sbjct: 412 FTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP 471
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D++ W+++I AYG HG A+ LF EM+QS VKP++VTF ++L ACSH GLVD+G
Sbjct: 472 --ERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG 529
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP-IKPNHAVWGALLGAC 238
L F M+ + IIP ++HY+C+I LLGRAGRL +AY ++++ P I + + L AC
Sbjct: 530 LYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSAC 589
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N++LG A + +P+++ YI+L+N+YA+ G+W +V VR + ++GL+K P
Sbjct: 590 RLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPG 649
Query: 299 QSLVEV 304
S +E+
Sbjct: 650 CSWIEI 655
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 15/307 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKCN + K+F + K A WN V+S + + EA++ F M +PD+ T
Sbjct: 150 MYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVT 209
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ + + A L DL + IH L+ SGF V++ LVD+Y KCG L A +F +P
Sbjct: 210 ITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP 269
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K ++ W+++I YG G G + LF M GVKP T TS L ACS + EG
Sbjct: 270 --NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG 327
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +++++ I P + + ++DL + G+++ A + + MP K W ++ V+
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP-KTTTVSWNVMISGYVT 386
Query: 241 HENV-----ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
+ GE++ + +EP+ I ++ AA + +EK R++ N + R
Sbjct: 387 EGKLFDALRLFGEMSKSF---VEPDA----ITFTSVLAACSQLAALEKGREIHNLIVERN 439
Query: 296 LPAQSLV 302
L +V
Sbjct: 440 LGNNEVV 446
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 9/241 (3%)
Query: 1 MYAKCNCGNLSYKMF-MKTSKKRTAPWNAVLSGFIHNSLAREAIQLF-KQMLVEDVQPDN 58
+Y CN + + +F + + + N +++G+ N + EA+ LF K M ++PD+
Sbjct: 47 LYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDS 106
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T+ S+L A L + IH L++ G + + V S LV +Y+KC A +F+
Sbjct: 107 YTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDE 166
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+P DKD+ W+ +I+ Y + G E A+ F M + G +P+ VT T+ + +C+ + +D
Sbjct: 167 MP--DKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLD 224
Query: 179 EGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
G + + ++ +D + ++D+ G+ G+L+ A + MP K A W +++
Sbjct: 225 RGREIHKELVNSGF--RMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVA-WNSMIN 281
Query: 237 A 237
Sbjct: 282 G 282
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 188/306 (61%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC + +F K T WN ++SG++ +A++LF +M V+PD T
Sbjct: 352 LYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAIT 411
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L A + LA L++ IH ++ V L+D+Y+KCG++ A +F +P
Sbjct: 412 FTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP 471
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D++ W+++I AYG HG A+ LF EM+QS VKP++VTF ++L ACSH GLVD+G
Sbjct: 472 --ERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG 529
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP-IKPNHAVWGALLGAC 238
L F M+ + IIP ++HY+C+I LLGRAGRL +AY ++++ P I + + L AC
Sbjct: 530 LYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSAC 589
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N++LG A + +P+++ YI+L+N+YA+ G+W +V VR + ++GL+K P
Sbjct: 590 RLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPG 649
Query: 299 QSLVEV 304
S +E+
Sbjct: 650 CSWIEI 655
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 15/307 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKCN + K+F + K A WN V+S + + EA++ F M +PD+ T
Sbjct: 150 MYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVT 209
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ + + A L DL + IH L+ SGF V++ LVD+Y KCG L A +F +P
Sbjct: 210 ITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP 269
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K ++ W+++I YG G G + LF M GVKP T TS L ACS + EG
Sbjct: 270 --NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG 327
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +++++ I P + + ++DL + G+++ A + + MP K W ++ V+
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP-KTTTVSWNVMISGYVT 386
Query: 241 HENV-----ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
+ GE++ + +EP+ I ++ AA + +EK R++ N + R
Sbjct: 387 EGKLFDALRLFGEMSKSF---VEPDA----ITFTSVLAACSQLAALEKGREIHNLIVERN 439
Query: 296 LPAQSLV 302
L +V
Sbjct: 440 LGNNEVV 446
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 9/241 (3%)
Query: 1 MYAKCNCGNLSYKMF-MKTSKKRTAPWNAVLSGFIHNSLAREAIQLF-KQMLVEDVQPDN 58
+Y CN + + +F + + + N +++G+ N + EA+ LF K M ++PD+
Sbjct: 47 LYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDS 106
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T+ S+L A L + IH L++ G + + V S LV +Y+KC A +F+
Sbjct: 107 YTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDE 166
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+P DKD+ W+ +I+ Y + G E A+ F M + G +P+ VT T+ + +C+ + +D
Sbjct: 167 MP--DKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLD 224
Query: 179 EGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
G + + ++ +D + ++D+ G+ G+L+ A + MP K A W +++
Sbjct: 225 RGREIHKELVNSGF--RMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVA-WNSMIN 281
Query: 237 A 237
Sbjct: 282 G 282
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 182/304 (59%), Gaps = 2/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K N + ++F + W A++ G+ NSL ++A++LF+ M+ E +P++ T
Sbjct: 353 YVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTL 412
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L ++ LA L +H IR + + V + L+ +YSK G + A +FN I
Sbjct: 413 AAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQI-C 471
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++D + W+++I A +HG G A+ LF +M++ +KP+ +T+ VL AC+HVGLV++G
Sbjct: 472 TERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGK 531
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M HHI P HY C+IDL GRAG +++AYN I+TMPI+P+ WG+LL AC
Sbjct: 532 RYFNLMKNVHHIEPTHSHYACMIDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRV 591
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+NV+L +VAA ++P N+G Y LAN ++A G W + KVR ++ + ++K S
Sbjct: 592 HKNVDLAKVAAEKLLLIDPNNSGAYSALANTHSACGEWEEAAKVRKLMRDREVKKEQGFS 651
Query: 301 LVEV 304
V++
Sbjct: 652 WVQI 655
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 128/328 (39%), Gaps = 69/328 (21%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV------ 54
MY K +F + + + WN ++S + + A+ LF QM D+
Sbjct: 186 MYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSI 245
Query: 55 --------------------------QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSG 88
+PD T S+L A A L LK IH Y++R+
Sbjct: 246 IAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRAD 305
Query: 89 FLYRLEVASILVDIYSKCGSLGYAHHI--------FNII--------------------- 119
V + L+ +Y+K G++ A I N+I
Sbjct: 306 IDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREI 365
Query: 120 --PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
LK +D++ W+A+I Y ++ + A+ LF M+ G +PN T +VL S + +
Sbjct: 366 FDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASL 425
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
D G L ++ + V +I + ++G + DA + + + + W +++ A
Sbjct: 426 DHGKQLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIA 485
Query: 238 CVSH----ENVELGEVAARWTFELEPEN 261
H E +EL E + F L+P++
Sbjct: 486 LAQHGLGNEAIELFEDMLK--FNLKPDH 511
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 110/248 (44%), Gaps = 30/248 (12%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + ++F + + W ++ G+ AI F+QM+ + + P TF
Sbjct: 86 YAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHTFQQMISDGILPTQFTF 145
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L + L +H ++++ G + VA+ L+++Y K G +F+ + L
Sbjct: 146 TNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRL 205
Query: 122 KDK-----------------------------DIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
+DK DII W++IIA Y G+ A+ F++M
Sbjct: 206 RDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDM 265
Query: 153 VQ-SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
+ S +KP++ T SVL AC+++ + G + ++++ I +I + ++G
Sbjct: 266 FRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGA 325
Query: 212 LDDAYNLI 219
++ A ++
Sbjct: 326 VEVARTIV 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
P + TF LL + D IH +I+ G + + + L++ YSK S AH +
Sbjct: 8 PKSDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRL 67
Query: 116 FNIIPLK-----------------------------DKDIIIWSAIIAAYGKHGHGEMAV 146
F+ +P + + D + W+ +I Y + G A+
Sbjct: 68 FSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAI 127
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLL 206
F +M+ G+ P Q TFT+VL +C G +D G + F++K + +V ++++
Sbjct: 128 HTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMY 187
Query: 207 GRAG 210
++G
Sbjct: 188 VKSG 191
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 183/304 (60%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K L+ +F K S K WNA+++G++ N A ++LFK ML V+P+ +
Sbjct: 206 YMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSL 265
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S+L + L+ L+ +H + +S + L+ +YSKCG L + +F IP
Sbjct: 266 TSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIP- 324
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
KD++ W+A+I+ Y +HG GE A+ LF+EM +S +KP+ +TF +VL AC+H G+VD G
Sbjct: 325 -RKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGT 383
Query: 182 SLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M+K I +HY C++DLLGRAGRL +A +++++MP KP+ A++G LLGAC
Sbjct: 384 KYFNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKSMPFKPHPAIFGTLLGACRI 443
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+++ + E AA+ EL+P + Y+ LAN+YAA +W V +VR + E + K P S
Sbjct: 444 HKSMHMAEFAAKNLLELDPTSATGYVQLANVYAAQSKWEHVARVRKSMKENNVVKPPGYS 503
Query: 301 LVEV 304
+E+
Sbjct: 504 WIEI 507
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 11/221 (4%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNI 80
+ TA WN +LSG+ + EA +++LV + + T+++++ Y DL A +
Sbjct: 132 RDTASWNTMLSGYAQVRMMDEA----RRLLVAMPEKNCVTWSAMVSGYVACGDLDAA--V 185
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG 140
C+ + + + + ++ Y K G +G A +F + L K ++ W+A+IA Y +G
Sbjct: 186 ECFY--AAPMKSVITWTAMITGYMKFGRVGLAEMLFWKLSL--KTLVTWNAMIAGYVDNG 241
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
E + LF M+++GVKPN ++ TSVL CS + + G + Q + K + T
Sbjct: 242 RAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVT 301
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+I + + G L D+++L +P K + W A++ H
Sbjct: 302 SLISMYSKCGDLKDSWDLFVQIPRK-DVVTWNAMISGYAQH 341
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC S+ +F++ +K WNA++SG+ + +A+ LF +M +++PD T
Sbjct: 306 MYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWIT 365
Query: 61 FNSLLPA--YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F ++L A +A + DL + + G R E +VD+ + G L A +
Sbjct: 366 FVAVLLACNHAGMVDLGTKY-FNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKS 424
Query: 119 IPLK 122
+P K
Sbjct: 425 MPFK 428
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 185/304 (60%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+ +++ ++ K +K PWNA++SG + +EA+ LF +M + ++PD T
Sbjct: 335 YARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTM 394
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ L A + L L + IH Y+ R + + + LVD+Y+KCG++ A +F IP
Sbjct: 395 VNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIP- 453
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++ + W+A+I HG+ + A+S F++M+ G+ P+++TF VL AC H GLV+EG
Sbjct: 454 -QRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGR 512
Query: 182 SLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M K ++ P + HY+C++DLLGRAG L++A L++ MP+ + AV GAL AC
Sbjct: 513 KYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRV 572
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+ NV++GE A E++P+++GNY+LLA++Y+ W++ R ++N+ G+ K P S
Sbjct: 573 YGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCS 632
Query: 301 LVEV 304
LVE+
Sbjct: 633 LVEI 636
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 6 NCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
+CG LS Y +F K+ + WN++++G + LA EAI+++K+M E V+P+ T
Sbjct: 205 SCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIG 264
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN------ 117
++ + + + DL HCY+ G + + + + L+D+Y KCG L A +F+
Sbjct: 265 MISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKT 324
Query: 118 -----------------------IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+ + +K ++ W+AII+ + G+ A++LF+EM
Sbjct: 325 LVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQI 384
Query: 155 SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDD 214
++P++VT + L ACS +G +D G+ + ++ +H + V T ++D+ + G +
Sbjct: 385 RTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIAR 444
Query: 215 AYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
A + +P + N W A++ H N +
Sbjct: 445 ALQVFEEIPQR-NCLTWTAVICGLALHGNAQ 474
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
WNA + G++ + L+K+ML+ ++PDN T+ LL + + ++
Sbjct: 125 WNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHV 184
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
++ GF + V + + + CG L A+ +FN + +D++ W+++I K G
Sbjct: 185 LKFGFECDIFVHNASITMLLSCGELSVAYDVFN--KSRVRDLVTWNSMITGCVKRGLAIE 242
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI---IPLVDHYTC 201
A+ ++ EM V+PN++T ++ +CS V ++ G ++ +H + IPL +
Sbjct: 243 AIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTN---A 299
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIK 225
++D+ + G L A L M K
Sbjct: 300 LMDMYVKCGELLTARVLFDNMAQK 323
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 179/305 (58%), Gaps = 5/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + ++K+F + + + WNA++SG LA +AI +F M +PD T
Sbjct: 141 LYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGIT 200
Query: 61 FNSLLPAYAILADLKQAMNIHCYLI--RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
S++ A + DL A+ +H Y+ ++ + +++ L+D+Y KCG + A+ +F
Sbjct: 201 MVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVF-- 258
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
++D+++ W+++I Y HGH + A+ F+ M +SGVKPN VTF VL AC H G V
Sbjct: 259 ATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQ 318
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG F M + I P + HY C++DLLGRAG DDA ++ MP+KPN VWG L+GA
Sbjct: 319 EGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGA 378
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H NV++ E A LEP N G Y++L+N+YA G W++VE++R + E L K+P
Sbjct: 379 CEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIP 438
Query: 298 AQSLV 302
A S+
Sbjct: 439 AYSIT 443
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 51/311 (16%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++ + + A++++ ML V PD T +L A + ++ +H Y I
Sbjct: 65 WNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGI 124
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ G S +++Y K G AH +F+ + + W+A+I+ + G A
Sbjct: 125 KLGLQSNEYCESGFINLYCKAGDFDSAHKVFD--ENHEPKLGSWNALISGLSQGGLAMDA 182
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL--FQFMLKHHIIPLVDHYTCII 203
+ +F +M + G +P+ +T SV+ AC +G + L L + F K + ++ +I
Sbjct: 183 IVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLI 242
Query: 204 DLLGRAGRLDDAYNLIRTMP----------------------------------IKPNHA 229
D+ G+ GR+D AY + TM +KPN+
Sbjct: 243 DMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYV 302
Query: 230 VWGALLGACVSHENVELGEVAARWTFELEPENTG------NYILLANLYAAVGRWRDVEK 283
+ +L ACV V+ G R+ F++ G +Y + +L G + D
Sbjct: 303 TFIGVLSACVHGGTVQEG----RFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDD--- 355
Query: 284 VRDMVNEVGLR 294
R MV E+ ++
Sbjct: 356 ARRMVEEMPMK 366
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 188/291 (64%), Gaps = 7/291 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNATFNSLLPAYAILA 72
+F K ++ T WN++++G+ N + +AI+LF++M+ ED +PD T S+ A L
Sbjct: 359 LFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLG 418
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+L L + + V + L+ +YS+CGS+ A IF + +D++ ++ +
Sbjct: 419 ELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQ--EMATRDLVSYNTL 476
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I+ + +HGHG ++ L +M + G++P+++T+ ++L ACSH GL+ EG LF+ +
Sbjct: 477 ISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK---- 532
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P VDHY C+ID+LGRAGRL++A LI++MP++P+ ++G+LL A H+ VELGE+AA
Sbjct: 533 FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAA 592
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
F++EP N+GNY+LL+N+YA+ GRW+D +KVRD + + G++K S +E
Sbjct: 593 KLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLE 643
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 35/246 (14%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILAD 73
F K ++ WNA+LSG+ E I+LF ML +VQPD T+ +++ + + L D
Sbjct: 223 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGD 282
Query: 74 LKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIF---------NIIP--- 120
+ +I L + GF V + L+D+++KCG+L AH IF + +P
Sbjct: 283 PCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNA 342
Query: 121 --------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKP 159
+ +D + W+++IA Y ++G A+ LF EM+ S KP
Sbjct: 343 MISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKP 402
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
++VT SV AC H+G + G + ++HI + Y +I + R G + DA +
Sbjct: 403 DEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIF 462
Query: 220 RTMPIK 225
+ M +
Sbjct: 463 QEMATR 468
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 121/265 (45%), Gaps = 23/265 (8%)
Query: 39 AREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVAS 97
A+ + LFK ML +++P+ + ++ ++ + ++M ++++SG+ V +
Sbjct: 84 AQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAG-----SESMLFLAHVLKSGYDRDHYVRN 138
Query: 98 ILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV 157
++ IY+K G + +A +F+ +P D+ + W+ +I+ Y K G+ E A +LF+ M +
Sbjct: 139 GILGIYAKYGPIEFARKLFDEMP--DRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEI 196
Query: 158 KPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYN 217
N +T+T+++ + G + F M + ++ + ++ + G ++
Sbjct: 197 SRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS----WNAMLSGYAQGGAPEETIR 252
Query: 218 LIRTM----PIKPNHAVWGALLGACVSHENVELGEVAARW---TFELEPENTGNYILLAN 270
L M ++P+ W ++ +C S + L E R T P NY +
Sbjct: 253 LFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRP----NYFVKTA 308
Query: 271 LYAAVGRWRDVEKVRDMVNEVGLRK 295
L + ++E + ++G+ K
Sbjct: 309 LLDMHAKCGNLEAAHKIFEQLGVYK 333
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 178/298 (59%), Gaps = 2/298 (0%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPA 67
N + K+F KK W A+++G++ + L+ EA++LF +M D ++P TF ++L A
Sbjct: 236 NRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGA 295
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
+ LA L + IH + ++ F V S L+++YSKCG A +F+ D+I
Sbjct: 296 CSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLI 355
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+ +IAAY HG+G A+ LFN+M + G + N VT+ +L ACSH GL DEG F +
Sbjct: 356 AWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDEL 415
Query: 188 LKHHIIPLV-DHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
LK+ + + DHYTC+IDL GRAGRLD+A N+I + + + +VWGALL C H N ++
Sbjct: 416 LKNRYMQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSVWGALLAGCSVHGNADI 475
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
G + A ++EPEN Y+L +N+YA+VG + VR + + GL+K P S ++V
Sbjct: 476 GRLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKDKGLKKQPGCSWIDV 533
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 49/229 (21%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + K+F + S++ + W ++SG+I L EA +LF ++ E S++
Sbjct: 18 NEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAE---------KSVI--- 65
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
V + +V Y K + A +FN +P+ ++++
Sbjct: 66 --------------------------VWTAMVSGYIKINRIEEAERLFNEMPV--RNVVS 97
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+ +I Y ++G + A+ LF M + V V++ +V+ A +H G +D+ LF M
Sbjct: 98 WNTMIDGYARNGRTQEAMDLFGRMPERNV----VSWNTVMTALAHCGRIDDAERLFNEMR 153
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ ++ +T ++ L + GR+DDA ++ MPI+ N W A++
Sbjct: 154 ERDVVS----WTTMVAGLSKNGRVDDARDVFDRMPIR-NVVSWNAMIAG 197
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 130/293 (44%), Gaps = 29/293 (9%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K N + ++F + + WN ++ G+ N +EA+ LF +M +V ++
Sbjct: 74 YIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNV----VSW 129
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
N+++ A A + A + + + + +V SK G + A +F+ +P+
Sbjct: 130 NTVMTALAHCGRIDDAERLFNEMRERDVVS----WTTMVAGLSKNGRVDDARDVFDRMPI 185
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++++ W+A+IA Y ++G + A+ LF M + + T + G ++
Sbjct: 186 --RNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQN----GDLNRAE 239
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP----IKPNHAVWGALLGA 237
LF M K ++I +T ++ + G ++A L M +KP + +LGA
Sbjct: 240 KLFHAMPKKNVIT----WTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGA 295
Query: 238 CVS----HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRD 286
C E ++ ++ ++ F+ E+T L N+Y+ G + +K+ D
Sbjct: 296 CSDLAGLPEGQQIHQMISKTVFQ---ESTYVVSALINMYSKCGDFHVAKKMFD 345
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 175/306 (57%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTA-PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
+Y+K + + K+F KT +R WN+++SG+IHN EA++L+ M V+ +
Sbjct: 375 VYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRS 434
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF+ L A A L +Q +H +L ++ + + V + LVD YSKCG L A F I
Sbjct: 435 TFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSI 494
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ W+A+I Y HG G A+S F M+ GV PN TF +VL ACSH GLVDE
Sbjct: 495 F--SPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDE 552
Query: 180 GLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GL F M + + I P ++HYTC++DLLGR+GR+ +A I MPIK + +WGALL A
Sbjct: 553 GLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNAS 612
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
NVELGE AA F L+P + + L+N+YA GRW K+R + + LRK
Sbjct: 613 CFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQG 672
Query: 299 QSLVEV 304
S +E+
Sbjct: 673 FSWIEL 678
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 47/271 (17%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
MF + + + WN ++SG+ EA+ L M V+ + +F++ L A
Sbjct: 59 MFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGS 118
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS------------------------- 108
L IH L +SG+ V S L+ Y +C
Sbjct: 119 LFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAG 178
Query: 109 ------LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG-EMAVSLFNEMVQSG-VKPN 160
+G A IF +P+ +D++ W+ +I+ Y K G E A+ LF M +S V PN
Sbjct: 179 YVQRDMIGDAMEIFEKMPV--RDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPN 236
Query: 161 QVTFTSVLHACS-----HVGLVDEGLSLFQ-FMLKHHIIPLVDHYTCIIDLLGRAGRLDD 214
+ T VL C+ +VG V GL + F + + + + C+ D +DD
Sbjct: 237 EFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDA------VDD 290
Query: 215 AYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
A + +M + V +L+G VS V+
Sbjct: 291 AKRVYESMVGEACSNVADSLIGGLVSMGRVK 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDI--YSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
KQ + L+ + Y V S + I ++K G L A H+F+ +PL+ + W+ +
Sbjct: 17 KQKLQFFTTLLEASQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRT--VSSWNTM 74
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
I+ Y + G A++L + M S VK N+V+F++ L AC+ G + G + + K
Sbjct: 75 ISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFK 131
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 189/305 (61%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC +L+ +F S K +N ++ G+ + + E++ LF +M + + PD +
Sbjct: 483 MYSKCGHLSLARNVF-NVSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVS 541
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++ A A L+ +KQ IH +L+R F L A+ L+D+Y+KCG + A +F+ I
Sbjct: 542 FIGIISACAHLSSIKQGKEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRI- 600
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ KD+ W+ +I YG G E A++LF M + GV+ + V++ +VL ACSH GL+++
Sbjct: 601 -QHKDVASWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEK 659
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G F+ M ++I P HY C++DLLGRAG++++A NLIR + +P+ +WGALLGAC
Sbjct: 660 GNKYFKQMQDYNIEPTHTHYACMVDLLGRAGQIEEAANLIRGLSFEPDANIWGALLGACR 719
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ NVELG AA F+L+P++ G YILL+N+YA GRW + VR+++ G +K P
Sbjct: 720 IYGNVELGHWAAEHLFKLKPDHCGYYILLSNMYAEAGRWDEANMVRELMKSRGAKKNPGC 779
Query: 300 SLVEV 304
S V++
Sbjct: 780 SWVQI 784
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 115/219 (52%), Gaps = 2/219 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC K+F + ++ WNAV++GF L+ +A+ F+ M+ ++P+ T
Sbjct: 281 VYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVT 340
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+LP L K M +H Y +R G + + + L+D+Y+K GS A IFN
Sbjct: 341 ISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFN--K 398
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D++I+ W++++A + ++ H AV L +M G PN VTFT+VL AC+ +G ++ G
Sbjct: 399 MGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVG 458
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
+ +++ + + D+ + G L A N+
Sbjct: 459 KEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVF 497
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 125/235 (53%), Gaps = 4/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK ++ +F K + WN++++ F N A++L +QM P+N T
Sbjct: 382 MYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVT 441
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++LPA A L L IH +I++G L +++ L D+YSKCG L A ++FN +
Sbjct: 442 FTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVFN-VS 500
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KDK + ++ +I Y + + +++LF+EM SG+ P+ V+F ++ AC+H+ + +G
Sbjct: 501 IKDK--VSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQG 558
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ +++ + ++DL + GR+D A + + K + A W ++
Sbjct: 559 KEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHK-DVASWNTMI 612
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 7/234 (2%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATF 61
NCG + +F + ++ WN V+ E++ FK+M+V V+PD T
Sbjct: 181 NCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTV 240
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S+LP A ++ A +H Y+ + G ++V + LVD+Y KCGS +F+ +
Sbjct: 241 VSVLPVCADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFD--EM 298
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+++ + W+A+I + G A+ F M+ +G++PN VT +S+L +GL G+
Sbjct: 299 DERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGM 358
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + L+ I + +ID+ ++G A + M + N W +++
Sbjct: 359 EVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDR-NIVSWNSMV 411
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 15/225 (6%)
Query: 21 KRTAPWNAVLSGFIHNSLAR--------EAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ T P++ + F+ N+L R + ++ M+ V+PD+ T+ +L A +
Sbjct: 91 QNTLPFSK--TAFLWNTLIRAYSIAGFFDGFGVYNTMVRSGVKPDDHTYPFVLKACSDYL 148
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ +H + + GF + V + L+ Y CG A ++F+ + ++D + W+ +
Sbjct: 149 KFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFD--EMFERDKVSWNTV 206
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSG--VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
I G E ++ F EMV + V+P+ VT SVL C+ V + ++ K
Sbjct: 207 IGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKV 266
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ V ++D+ G+ G + + M + N W A++
Sbjct: 267 GLSGHVKVGNALVDVYGKCGSEEACKKVFDEMD-ERNEVSWNAVI 310
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 74 LKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIF-NIIPLKDKDIIIWSA 131
L Q +H + I + FL + + +++ L+ Y+ + +F N +P K +W+
Sbjct: 47 LSQTNQLHAFSILNAFLPHSVSISASLILKYASFRHPETSLILFQNTLPFS-KTAFLWNT 105
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I AY G + ++N MV+SGVKP+ T+ VL ACS D+G + + K
Sbjct: 106 LIRAYSIAGFFD-GFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFDKGREVHGVVFKVG 164
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
V ++ G G DA N+ M + + W ++G C
Sbjct: 165 FDKDVFVGNTLLMFYGNCGFFVDAMNVFDEM-FERDKVSWNTVIGLC 210
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 179/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y +C L+ F +K WN +++GF N +A+ +F QML + PD +
Sbjct: 546 LYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEIS 605
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
L A + ++ L+ +HC+ ++S V L+D+Y+KCG + + +IF+ +
Sbjct: 606 IIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVH 665
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
LK + + W+ +I YG HGHG A+ LF M +G +P+ VTF ++L AC+H GLV EG
Sbjct: 666 LKGE--VTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEG 723
Query: 181 LS-LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L L Q I P ++HY C++D+LGRAGRL++A L+ +P KP+ +W +LL +C
Sbjct: 724 LEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCR 783
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
++ ++++GE A EL P+ NY+L++N YA +G+W +V K+R + E+GL+K
Sbjct: 784 NYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGC 843
Query: 300 SLVEV 304
S +E+
Sbjct: 844 SWIEI 848
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 120/237 (50%), Gaps = 9/237 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC + + +F K + WNA++ G + N R+A+ L+ M ++PD T
Sbjct: 446 YAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTI 505
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
SLL A A L L IH ++R+GF + LV +Y +CG + A F+ +
Sbjct: 506 ASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFD--NM 563
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++K+++ W+ +I + ++ A+ +F++M+ S + P++++ L ACS V + G
Sbjct: 564 EEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGK 623
Query: 182 SLFQFMLKHHIIPLVDH--YTC-IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
L F +K H L +H TC +ID+ + G ++ + N+ + +K W L+
Sbjct: 624 ELHCFAVKSH---LTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLK-GEVTWNVLI 676
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 12/247 (4%)
Query: 1 MYAKCNCGNL-SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDN 58
MY+KC G L ++ T++K WN+++ G+ + R A +L ++M +ED V+ +
Sbjct: 343 MYSKC--GYLCEARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNE 400
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE-VASILVDIYSKCGSLGYAHHIFN 117
T ++LP + IH Y +R GF+ E VA+ V Y+KCGSL YA +F
Sbjct: 401 VTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVF- 459
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
++ K + W+A+I + ++G A+ L+ M SG++P+ T S+L AC+ + +
Sbjct: 460 -CGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSL 518
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCI--IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G + ML++ +D + CI + L + G++ A M K N W ++
Sbjct: 519 SCGKEIHGSMLRNGF--ELDEFICISLVSLYVQCGKILLAKLFFDNMEEK-NLVCWNTMI 575
Query: 236 GACVSHE 242
+E
Sbjct: 576 NGFSQNE 582
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 124/240 (51%), Gaps = 7/240 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MY+ C+ S +F + +K WNA+LSG++ NSL R+A+ +F +M+ + + PDN
Sbjct: 138 MYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNF 197
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T ++ A + D++ +H + +++ L + V + L+ +Y K G + A +F+ +
Sbjct: 198 TLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKM 257
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ--SGVKPNQVTFTSVLHACSHVGLV 177
P ++++ W++++ A ++G E + LF ++ G+ P+ T +V+ C+ G V
Sbjct: 258 P--QRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEV 315
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ LK + + + ++D+ + G L +A L T + N W +++G
Sbjct: 316 RLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGG 373
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDN 58
MY K + K+F K ++ WN+V+ + N + E+ LFK +L D + PD
Sbjct: 240 MYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDV 299
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
AT +++P A +++ M H ++ G L+V S L+D+YSKCG L A +F+
Sbjct: 300 ATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT 359
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHAC 171
+K++I W+++I Y K A L +M ++ VK N+VT +VL C
Sbjct: 360 ---NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 177/306 (57%), Gaps = 5/306 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC K+F K KK W +++ + S +A+ +F QM E P++ TF
Sbjct: 419 YVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTF 478
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S++ A L L+ IH + ++ + S L+D+YSKCG+L A +IF I
Sbjct: 479 SSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERI-- 536
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ D + W+AII+ Y +HG E A+ LF +M QS VK N VT +L ACSH G+V++GL
Sbjct: 537 SNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGL 596
Query: 182 SLF-QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+F Q + ++P ++HY C++DLLGR GRLD+A I MPI+P+ VW LLGAC
Sbjct: 597 EIFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLGACRI 656
Query: 241 HENVELGEVAAR--WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H N ELGE AA+ + + EPE++ Y+LL+N Y G D +RD++ E G+RK P
Sbjct: 657 HGNAELGETAAQKILSTQPEPEHSSTYVLLSNTYIESGLLEDGIGLRDVMKERGIRKEPG 716
Query: 299 QSLVEV 304
S + V
Sbjct: 717 YSWISV 722
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 18/254 (7%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRT----APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP 56
MY+KC G L + SK APWNA+++G+ EA+++F +M DV+P
Sbjct: 314 MYSKC--GVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKP 371
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHI 115
D TF + + A L LK H ++ GF + V + L D Y KC SL +
Sbjct: 372 DLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVLNALADAYVKCESLEAGEKV 431
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F ++ KDI+ W+ ++ AY + A+++F++M G PN TF+SV+ AC +
Sbjct: 432 F--YKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLC 489
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCI----IDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
L++ G + + K + D +CI ID+ + G L +A N+ + P+ W
Sbjct: 490 LLEYGQQIHGLICKASL----DAESCIESALIDMYSKCGNLTEAKNIFERIS-NPDTVTW 544
Query: 232 GALLGACVSHENVE 245
A++ H VE
Sbjct: 545 TAIISTYAQHGLVE 558
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAK S +F + WNA++SGF N L +A M+ V P+ T
Sbjct: 213 LYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTT 272
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F + A +L D+ + +H Y G V + L+++YSKCG L A +F+
Sbjct: 273 FLCISKAVGLLGDINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDS-- 330
Query: 121 LKDKDIII---WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
K + ++ W+A+I Y + G A+ +F M Q+ VKP+ TF V ++ +
Sbjct: 331 -KFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNSIA----- 384
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
GL + + + H + L C D M I +V AL A
Sbjct: 385 --GLKCLKSLKEAHGVAL----KCGFD----------------AMEI----SVLNALADA 418
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRW-RDVEKVRDMVNE 290
V E++E GE + +++E ++ ++ + Y W + + M NE
Sbjct: 419 YVKCESLEAGE---KVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNE 469
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+KC + + K+F S++ W ++ + R A++LF ML + + D F
Sbjct: 113 YSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAF 172
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+++L + L + +H ++ GFL V + L+++Y+K G + ++FN +
Sbjct: 173 SAVLQSCVGLDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFN--NM 230
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
D + + W+A+I+ + +G A M+++GV PN+ TF + A +G ++
Sbjct: 231 TDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCH 290
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
+ ++ + + T +I++ + G L DA
Sbjct: 291 EVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDA 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 101/197 (51%), Gaps = 9/197 (4%)
Query: 1 MYAKCNCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY+KC GNL+ +F + S T W A++S + + L +A+QLF++M V+ +
Sbjct: 519 MYSKC--GNLTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANA 576
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
T +L A + ++ + I + + G + +E + +VD+ + G L A +
Sbjct: 577 VTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFID 636
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV--G 175
+P+ + D ++W ++ A HG+ E+ + +++ + +P + T VL + +++ G
Sbjct: 637 KMPI-EPDEMVWQTLLGACRIHGNAELGETAAQKILSTQPEPEHSS-TYVLLSNTYIESG 694
Query: 176 LVDEGLSLFQFMLKHHI 192
L+++G+ L M + I
Sbjct: 695 LLEDGIGLRDVMKERGI 711
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 51 VEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI--LVDIYSKCGS 108
+ QP+ LL + LKQA IH ++++SGF R + + +V YSKC
Sbjct: 59 TQQKQPNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKD 118
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
A +F+ + ++++ W+ +I A +HG+ A+ LF M++ G+ + F++VL
Sbjct: 119 YDSARKVFD--GMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVL 176
Query: 169 HACSHV-----GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP 223
+C + G + + + L H ++ T +++L + G + + N+ M
Sbjct: 177 QSCVGLDSVVFGEMVHAQVVVRGFLMHAVVG-----TSLLNLYAKLGMCECSVNVFNNM- 230
Query: 224 IKPNHAVWGALLGACVSH 241
N W A++ S+
Sbjct: 231 TDVNDVSWNAMISGFTSN 248
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 184/288 (63%), Gaps = 10/288 (3%)
Query: 23 TAPWN-----AVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQA 77
T PWN A+L+ + N AREAI+++++M ++ + + A A L D++ +
Sbjct: 270 TVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMS 329
Query: 78 MNIHCYLIRSGFLYRLEVAS-ILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAY 136
N Y I GF + + S L+ + SKCG++ A FNI ++++D+ +SA+IAA+
Sbjct: 330 -NSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNI--MRNRDLYTYSAMIAAF 386
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPL 195
+HG + A+ LF +M Q G+KPNQVTF VL+ACS GL++EG FQ M + + I PL
Sbjct: 387 AEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPL 446
Query: 196 VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTF 255
+HYTC++DLLGRAG+L+ AY+LI+ + WG+LL AC + NVELGE+AAR F
Sbjct: 447 PEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLF 506
Query: 256 ELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
E++P ++GNY+LLAN YA+ +W E+V+ ++++ G++K S ++
Sbjct: 507 EIDPTDSGNYVLLANTYASNDKWECAEEVKKLMSKKGMKKPSGYSWIQ 554
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 26 WNAVLSGFI-HNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
W +++ F+ H++ I F +M + + P TF+ +L A + + +H L
Sbjct: 82 WTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNACGRVPAGFEGKQVHARL 141
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
++SGFL V + L+D+Y+KCG + A +F+ I D+D++ W+A+I Y K G
Sbjct: 142 VQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIV--DRDVVAWTAMICGYAKAGRMVD 199
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A LF+ M + N T+T+++ ++ G + + L+ M + V +I
Sbjct: 200 ARFLFDNMGER----NSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWV----AMIA 251
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH-----ENVELGEVAAR 252
G+ G + +A + + + N + ALL AC + E +E+ E R
Sbjct: 252 GYGKLGNVSEARRIFDEITVPWNPSTCAALL-ACYAQNGHAREAIEMYEKMRR 303
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 108 SLGYAHHIFNIIPLKDKDIIIWSAIIAAY-GKHGHGEMAVSLFNEMVQSGVKPNQVTFTS 166
+L YAH +F+ +P + IW+++I A+ H H +S F M Q G+ P+ TF+
Sbjct: 62 NLYYAHKLFDTMP-NCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSL 120
Query: 167 VLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP 226
VL+AC V EG + +++ + T ++D+ + G + DA ++ + +
Sbjct: 121 VLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGI-VDR 179
Query: 227 NHAVWGALLGACVSHENVELGEVAARWTFE-LEPENTGNYILLANLYAAVGRWRDVEKVR 285
+ W A++ + V AR+ F+ + N+ + + YA G + ++
Sbjct: 180 DVVAWTAMICGYAKAGRM----VDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELY 235
Query: 286 DMVN 289
D++N
Sbjct: 236 DVMN 239
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 176/284 (61%), Gaps = 5/284 (1%)
Query: 24 APWNAVLSGFIHNSLAREAIQLFKQM--LVEDVQPDNATFNSLLPAYAILADLKQAMNIH 81
+ WN V+ G + N+ A+ L ++M +++P+ T +S++P ++ ++L+ +H
Sbjct: 357 STWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVH 416
Query: 82 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGH 141
Y IR + + VA+ +VD Y+K G + A +F+ + + +IIW++II AY HG
Sbjct: 417 GYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFD--QSQSRSLIIWTSIIYAYASHGD 474
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKHHIIPLVDHYT 200
+A+ L+N+M+ G++P+ VT TSVL AC+H GLV+E +F M KH I P+V+HY
Sbjct: 475 ASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYA 534
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 260
C++ +L RAG+L +A I MP +P VWGALL +++VE+G+ A FE+EPE
Sbjct: 535 CMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYDDVEIGKFACDHLFEIEPE 594
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+TGNYI++ANLY+ GRW + K+R+ + + G K+ S +E
Sbjct: 595 HTGNYIIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSSWIET 638
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 110/233 (47%), Gaps = 10/233 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE---DVQPD 57
YAK N + +F K K + WN+++ + SL +A+ LF + +V PD
Sbjct: 93 FYAKSNLIRNARNVFDKIPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPD 152
Query: 58 NATFNSLLPAYAILADL--KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
N T S+L A+ + + K A IHC + GF + V + LV Y +CG + A +
Sbjct: 153 NFTMTSILKTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKV 212
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV---QSGVKPNQVTFTSVLHACS 172
F+ + ++DI+ W+A+I Y + G E L+ EM+ G+ PN VT SV+ AC
Sbjct: 213 FD--EMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACG 270
Query: 173 HVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+ G+ + +FM I V II + + G L+ A L M K
Sbjct: 271 QSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEK 323
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 121/278 (43%), Gaps = 37/278 (13%)
Query: 5 CNCG--NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV---EDVQPDNA 59
C CG ++ K+F + +++ WNA++ G+ + E +L+ +ML + + P+
Sbjct: 201 CRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAV 260
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S++ A DL M +H ++ G + + + ++ +Y+KCGSL YA +F+ +
Sbjct: 261 TIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEM 320
Query: 120 PLKDK--------------------DII---------IWSAIIAAYGKHGHGEMAVSLFN 150
KD+ D++ W+ +I ++ E A+ L
Sbjct: 321 GEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVR 380
Query: 151 EMVQSG--VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
EM G +KPN VT +S++ S+ + + + ++ + T I+D +
Sbjct: 381 EMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAK 440
Query: 209 AGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
G + A + + + +W +++ A SH + L
Sbjct: 441 LGFIHLARRVFDQSQSR-SLIIWTSIIYAYASHGDASL 477
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 175/307 (57%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC S ++F + WNA +S + N +A EAI LF M V P+ T
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVT 322
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++L A A + L + Y G + + VA+ L+D+Y+KCGSL A +FN +P
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP 382
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG--VKPNQVTFTSVLHACSHVGLVD 178
K+ W+A+I+A HG + A+SLF M G +PN +TF S+L AC H GLVD
Sbjct: 383 RKND--ASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVD 440
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG LF M ++P ++HY+C++DLL RAG L +A+++I MP KP++ GAL A
Sbjct: 441 EGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSA 500
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C +NV++GE + EL+P N+GNYI+ + +Y + W D ++R ++ E G+ K P
Sbjct: 501 CQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTP 560
Query: 298 AQSLVEV 304
S +EV
Sbjct: 561 GCSWIEV 567
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 136/242 (56%), Gaps = 4/242 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MY +C ++ K+F + ++K WN++LSG+ AREA+++F ++ E +PD
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ S+L A L DL+ + +++ G + S L+ +YSKCG L + IF+ +
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P +D I W+A I+AY ++G + A+SLF+ M ++GV PN+VT T+VL AC+ +G +D
Sbjct: 281 P--SRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G + ++ + + T +ID+ + G L+ A + MP K N A W A++ A
Sbjct: 339 GKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRK-NDASWNAMISALA 397
Query: 240 SH 241
SH
Sbjct: 398 SH 399
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
+ L+ QM ++ P+N TF + A A L +++ A HC + + G + +V
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 102 IYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPN 160
+Y +CG G A +F+ I +KD++ W+++++ Y K G AV +F + +SG +P+
Sbjct: 161 MYFRCGENGVARKVFDEI--TEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPD 218
Query: 161 QVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNL 218
+++ SVL AC +G ++ G + F+++ + V+ Y + +I + + G L + +
Sbjct: 219 EMSLVSVLGACGELGDLELGRWVEGFVVERGM--KVNSYIGSALISMYSKCGELVSSRRI 276
Query: 219 IRTMPIKPNHAVWGALLGA 237
MP + + W A + A
Sbjct: 277 FDGMPSR-DFITWNAAISA 294
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 193/339 (56%), Gaps = 36/339 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC C ++ +F ++ K+ WN++++G + NS + A++LF++M+ E + PD+AT
Sbjct: 282 MYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSAT 341
Query: 61 FNSLLPAYA--------------------------------ILAD---LKQAMNIHCYLI 85
+NSL+ +A + D L+ A IH Y +
Sbjct: 342 WNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYAL 401
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R +A+ LVD Y KCG + +A +F+ +K D W+A+I YG +G E A
Sbjct: 402 RICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESA 461
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+F EM+ V+PN TF SVL ACSH G ++ GL F+ + K+ + P +H+ C++DL
Sbjct: 462 FEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFRMIRKYGLDPKPEHFGCVVDL 521
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNY 265
LGRAG+L +A +L++ + +P +V+ +LLGAC + + LGE A ++EP+N
Sbjct: 522 LGRAGQLGEARDLVQELA-EPPASVFDSLLGACRCYLDSNLGEEMAMKLIDIEPKNPAPL 580
Query: 266 ILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++L+N+YAA+GRW +VE++R ++ + GL K S++EV
Sbjct: 581 VVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISMIEV 619
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 3/215 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNAT 60
Y+KC S K+F K +NA +SG + N R +FK M + + +P+ T
Sbjct: 181 YSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVT 240
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A A L++++ +H ++ + V + LVD+YSKCG G A +F+
Sbjct: 241 LVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFS--R 298
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +++I W+++IA + E AV LF MV G+ P+ T+ S++ + G+ E
Sbjct: 299 SEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEA 358
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
F M + P + T ++ + G + L A
Sbjct: 359 FKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSA 393
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 9/241 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + + +NAVLSG N +A+ LF+Q+ +++P++ T SLL A +
Sbjct: 92 ELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSARDV-K 150
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ +HC + G Y + V++ LV YSKCG L ++ +F L+ K+++ ++A
Sbjct: 151 NQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFE--NLRVKNVVTYNAF 208
Query: 133 IAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
++ ++G + +F +M + KPN+VT SV+ AC+ + + G + +K
Sbjct: 209 MSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLE 268
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV----SHENVELG 247
V T ++D+ + G A+++ + K N W +++ + S VEL
Sbjct: 269 ACDHVMVVTSLVDMYSKCGCWGSAFDVF-SRSEKRNLITWNSMIAGMMMNSESERAVELF 327
Query: 248 E 248
E
Sbjct: 328 E 328
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 184/310 (59%), Gaps = 9/310 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKR--TAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQP 56
MYAKC ++ MF + K W ++ G+ + A A+QLF +M D + P
Sbjct: 302 MYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVP 361
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYAHH 114
++ T + +L + A L+ L IH Y++R +Y L VA+ L+D+YSK G + A
Sbjct: 362 NDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQV 421
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+F+ + ++ + W++++ YG HG E A +F+EM + + P+ +TF VL+ACSH
Sbjct: 422 VFD--SMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHS 479
Query: 175 GLVDEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
G+VD G++LF M K + P V+HY C++DLLGRAGRL +A LI M ++P VW +
Sbjct: 480 GMVDRGINLFYRMSKDFGVDPGVEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWIS 539
Query: 234 LLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
LL AC +H N+EL E AA+ EL+ +N G Y LL+N+YA RW+DV ++R ++ G+
Sbjct: 540 LLSACRTHSNIELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGI 599
Query: 294 RKLPAQSLVE 303
+K P S V+
Sbjct: 600 KKRPGWSWVQ 609
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 123/236 (52%), Gaps = 16/236 (6%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
KM + + W++V+SG+ EA+ +F+QM +P+ T SLL A A +
Sbjct: 206 KMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVG 265
Query: 73 DLKQAMNIHCYLIRSGFLYR---------LEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
L HCY ++ F+ + L V + L+D+Y+KC SL A +F+ I KD
Sbjct: 266 ALLHGKETHCYSVK--FILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKD 323
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEM--VQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+D++ W+ +I Y +HG A+ LF+EM + + + PN T + VL +C+ + ++ G
Sbjct: 324 RDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGK 383
Query: 182 SLFQFMLKHHII--PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ ++L+ +I ++ C+ID+ ++G +D A + +M K N W +LL
Sbjct: 384 QIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLL 438
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 6/200 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKK---RTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQP 56
MY KC + K+F + + + WN+++S + H + A+ LF++M V + P
Sbjct: 54 MYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILP 113
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
D ++LP L +H + +RSG + + V + LVD+Y+KCG + A+ +F
Sbjct: 114 DTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVF 173
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
++ KD++ W+A++ Y ++G E A+SLF +M + ++ + VT++SV+ + G
Sbjct: 174 E--RMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGF 231
Query: 177 VDEGLSLFQFMLKHHIIPLV 196
E + +F+ M P V
Sbjct: 232 GCEAMDVFRQMCGCRCRPNV 251
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 95/182 (52%), Gaps = 3/182 (1%)
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
PD+ TF + A +++ + +IH +IR GF + V + ++ +Y KC ++ +A +
Sbjct: 8 PDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKV 67
Query: 116 FNIIPLKD-KDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSH 173
F+ + + D + W++I++ Y +AVSLF EM V G+ P+ V ++L C +
Sbjct: 68 FDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGY 127
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
+GL G + F ++ ++ V ++D+ + G+++DA + M K + W A
Sbjct: 128 LGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFK-DVVTWNA 186
Query: 234 LL 235
++
Sbjct: 187 MV 188
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 182/306 (59%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRT-APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MY KC+ + + +F S+ WNA+LS + E +L+K+M +PD+
Sbjct: 413 MYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSI 472
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +LL A L L +HCY I+SG + + V + L+D+Y+KCGSL +A +F+
Sbjct: 473 TITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFD-- 530
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ DI+ WS++I Y + G G A++LF M GV+PN+VT+ L ACSH+GLV+E
Sbjct: 531 STQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEE 590
Query: 180 GLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G L++ M +H I P +H++CI+DLL RAG L +A I+ + + W LL AC
Sbjct: 591 GWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAAC 650
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
+H NV++ E A +L+P N+ ++L N++A+ G W +V K+R ++ ++G++K+P
Sbjct: 651 KTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPG 710
Query: 299 QSLVEV 304
QS +EV
Sbjct: 711 QSWIEV 716
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNATFNSLLPAYAILA 72
+F + K W +++G+I EA+ LF+ +L + QP+ F S+ A + L
Sbjct: 223 VFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLL 282
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+L+ +H ++ G + L D+Y+K G L A F +K+ DI+ W+AI
Sbjct: 283 ELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAF--CQIKNPDIVSWNAI 340
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
IAA+ +G A+ F +M+ G+ P+ +T+ S+L C +++G + +++K
Sbjct: 341 IAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGF 400
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
+ ++ + + L DA N+ R + N W A+L AC+ + + GE
Sbjct: 401 DKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACL--QKKQEGE---- 454
Query: 253 WTFELEPE 260
TF L E
Sbjct: 455 -TFRLYKE 461
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F W +++SG+ N A +AI ++ QM PD T
Sbjct: 109 MYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLT 168
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A I D+ +H ++I+S F + L + L+ +Y+ G + +A ++F IP
Sbjct: 169 FGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIP 228
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHVGLVDE 179
KD+I W +I Y + G+ A+ LF ++++ G +PN+ F SV ACS + ++
Sbjct: 229 --TKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEY 286
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G + +K + V + D+ + G L A + P+ W A++ A
Sbjct: 287 GKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSA-KMAFCQIKNPDIVSWNAIIAA 343
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 139/323 (43%), Gaps = 47/323 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + F + WNA+++ F N A EAI F+QM+ + PD+ T
Sbjct: 312 MYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSIT 371
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ SLL L Q IH Y+++ GF + V + L+ +Y+KC L A ++F I
Sbjct: 372 YISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDIS 431
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ +++ W+AI++A + L+ EM SG KP+ +T T++L C+ + + G
Sbjct: 432 -RNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVG 490
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD--------------------------- 213
+ + +K +I V +ID+ + G L
Sbjct: 491 NQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQC 550
Query: 214 ----DAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARW----TFELE---P 259
+A NL R M ++PN + L AC SH +G V W + E E P
Sbjct: 551 GLGHEALNLFRIMTNLGVQPNEVTYLGALSAC-SH----IGLVEEGWRLYKSMETEHGIP 605
Query: 260 ENTGNYILLANLYAAVGRWRDVE 282
++ + +L A G + E
Sbjct: 606 PTREHFSCIVDLLARAGCLHEAE 628
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 136/264 (51%), Gaps = 16/264 (6%)
Query: 40 REAIQLFK-QMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI 98
+EA++ F + + + +T+ SL+ A A L A IH ++++S + + + +
Sbjct: 46 KEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNH 105
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
++++Y KCGS+ A +F+ + L +++ W+++I+ Y ++G A+ ++ +M +SG
Sbjct: 106 MINMYGKCGSMKDARKVFDTMQL--PNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQF 163
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
P+Q+TF SV+ AC G +D G L ++K + +I + G+++ A N+
Sbjct: 164 PDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNV 223
Query: 219 IRTMPIKPNHAVWGALLGACVSHENVELG-EVAARWTF-ELEPENT--GNYILLANLYAA 274
+P K + WG ++ ++LG V A + F +L + T N + ++++A
Sbjct: 224 FTRIPTK-DLISWGTMITG-----YIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSA 277
Query: 275 VGRWRDVE---KVRDMVNEVGLRK 295
++E +V M + GLR+
Sbjct: 278 CSSLLELEYGKQVHGMCVKFGLRR 301
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + +F + +K T WN +++G+ + EA+ ++ +M + D+ T
Sbjct: 268 MYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFT 327
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++ A LA L+ H L+R GF L S LV+ YSK G + A H+F+
Sbjct: 328 ISIVITICARLASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFD--K 385
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K+II W+A+IA YG HG GE A+ +F +M+Q + PN VTF +VL ACS+ GL + G
Sbjct: 386 MHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERG 445
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+FQ M + H+I P HY C+I+LLGR G LD+A LIR P P +W ALL AC
Sbjct: 446 WEIFQSMSQDHNIKPRAMHYACMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACR 505
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+N+ELG+ AA + +EPE NY++L N+Y + G+ ++ V + GLR LPA
Sbjct: 506 MHKNLELGKFAAEKLYGMEPEKLCNYVMLLNIYNSSGKLKEAADVLQTLKRKGLRMLPAY 565
Query: 300 SLVEV 304
+ +EV
Sbjct: 566 TWIEV 570
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+ +CN + F ++ ++ W ++ G + + EA +LF M E + T
Sbjct: 167 MHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRT 226
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +++ A A L ++ IH +++ V L+D+YSKCG++ A +F+ +P
Sbjct: 227 FAAMVRASARLDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMP 286
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K + W+ IIA Y G E A+ ++ +M SG K + T + V+ C+ + ++ G
Sbjct: 287 --QKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHG 344
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+++ + + +++ + GR+++A ++ M K N W AL+
Sbjct: 345 KQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRK-NIISWNALIAGYGH 403
Query: 241 H----ENVELGE 248
H E +E+ E
Sbjct: 404 HGRGEEAIEMFE 415
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 180/304 (59%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC S K+F + + WN ++ G++ A+ LF ML D+QP T
Sbjct: 382 VYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVT 441
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++S+L A A LA L+ + IH I++ + VA+ L+D+Y+KCG + A F+
Sbjct: 442 YSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFD--K 499
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +D + W+A+I Y HG A++LF+ M + KPN++TF VL ACS+ GL+ +G
Sbjct: 500 MNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG 559
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ F+ M K + I P ++HYTC++ LLGR GR D+A LI + +P+ VW ALLGACV
Sbjct: 560 QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACV 619
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+ V+LG V A+ E+EP + ++LL+N+YA GRW +V VR + + +RK P
Sbjct: 620 IHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGL 679
Query: 300 SLVE 303
S VE
Sbjct: 680 SWVE 683
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 124/235 (52%), Gaps = 3/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAK + ++F + K PW+ +++ + + ++EA+ LF +M V P+N T
Sbjct: 281 LYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFT 340
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L A A L IH +++ G + V++ ++D+Y+KCG + + +F +P
Sbjct: 341 FASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D++ + W+ II Y + G GE A++LF M++ ++P +VT++SVL A + + ++ G
Sbjct: 401 --DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPG 458
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
L + +K +ID+ + GR++DA M K + W A++
Sbjct: 459 LQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMI 512
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
+++ +F K W +++ + N E++QLF QM + +P+N T + L +
Sbjct: 188 DVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSC 247
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
L ++H ++ + + L V L+++Y+K G + A +F +P D+I
Sbjct: 248 LGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP--KTDLIP 305
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
WS +IA Y + + A+ LF M Q+ V PN TF SVL AC+ +D G + +L
Sbjct: 306 WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL 365
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
K + V I+D+ + G ++++ L +P + N W ++
Sbjct: 366 KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDR-NDVTWNTII 411
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 44/285 (15%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y + N + K+F + + T + + G+ + +A+ ++ E + + F
Sbjct: 80 YVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVF 139
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+LL + +H + + G V + L+D YS G++ A H+F+ I
Sbjct: 140 TTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICC 199
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL------------- 168
KD++ W+ ++A Y ++ E ++ LFN+M G KPN T + L
Sbjct: 200 --KDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGK 257
Query: 169 --HACSHVGLVDEGL--------------------SLFQFMLKHHIIPLVDHYTCIIDLL 206
H C+ G D L LF+ M K +IP ++ +I
Sbjct: 258 SVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIP----WSLMIARY 313
Query: 207 GRAGRLDDAYNL---IRTMPIKPNHAVWGALLGACVSHENVELGE 248
++ R +A +L +R + PN+ + ++L AC S +++LG+
Sbjct: 314 AQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 177/306 (57%), Gaps = 3/306 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC N++ ++F K ++ WN +++ + EA+ LF ML PD AT
Sbjct: 259 MYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKAT 318
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L A L +H YL++S + +A+ L+D+Y+K G LG A IFN
Sbjct: 319 FLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNN-S 377
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
L+ KD+++W+++I A HGHG A+SLF M + S + P+ +T+ VL ACSHVGLV+E
Sbjct: 378 LEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEE 437
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
F M K + I+P +HY+C++DLL RAG +A L+ TM I+PN A+WGALL C
Sbjct: 438 AQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGC 497
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
HEN+ + ELEP +G Y LL+N+YA G+W +V + R M+ + K
Sbjct: 498 QIHENIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEEVNRTRKMMKHKRIAKTIG 557
Query: 299 QSLVEV 304
S VE+
Sbjct: 558 HSSVEM 563
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 128/248 (51%), Gaps = 9/248 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C K+F K K W +++G++ N REA+++FK+M V+ + T
Sbjct: 151 MYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVT 210
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSG---FLY----RLEVASILVDIYSKCGSLGYAH 113
+ L A A D+ +H + ++G F++ + +A+ +V++Y+KCG L A
Sbjct: 211 MVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVAR 270
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
+FN +P +++I+ W+ +I AY ++ A+ LF M+ +G P++ TF SVL C+
Sbjct: 271 ELFNKMP--ERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCAR 328
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
++ G ++ ++LK ++ + T ++D+ + G L A + K + +W +
Sbjct: 329 RCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTS 388
Query: 234 LLGACVSH 241
++ A H
Sbjct: 389 MINALAIH 396
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N+++ G+ ++ ++ L+KQML PD+ TF +L A + + D +H ++
Sbjct: 75 FNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVHSCIL 134
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+SGF + VA+ L+++Y +C ++ +F+ IP +++ W+ +I Y + A
Sbjct: 135 KSGFEANVYVATGLLNMYVECKNMESGLKVFDKIP--KWNVVAWTCLINGYVINDQPREA 192
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY------ 199
+ +F EM + GV+ N+VT + L AC+ VD G + + + K P V
Sbjct: 193 LEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVIL 252
Query: 200 -TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
T I+++ + G L+ A L MP + N W ++ A +E
Sbjct: 253 ATAIVEMYAKCGWLNVARELFNKMP-ERNIVAWNCMINAYNQYE 295
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 185/307 (60%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C N +Y +F K +K WNA+LSGF H + E L ++ML E V+P+ T
Sbjct: 372 MYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVT 431
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYAHHIFNI 118
S+LP A +A+L+ HCY+++ ++ L + + LV++YS+ G + A +F+
Sbjct: 432 IASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFD- 490
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
L KD + ++++I YG G GE A+ LF EM + +KP+ VT +VL ACSH GLV
Sbjct: 491 -SLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVA 549
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+G LF+ M++ + I P V+HY+C++DL GRAG LD A +I M KP A+W L+GA
Sbjct: 550 QGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGA 609
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H N +GE AA E++P+++G Y+L+AN+YAA R + R + + G ++ P
Sbjct: 610 CKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKEAEARTYMRDSGAKRTP 669
Query: 298 AQSLVEV 304
+ V+V
Sbjct: 670 GCAWVDV 676
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN V+S ++ N L +AI ++++ML + V PD+ T+ S+L A L D + +H +
Sbjct: 161 WNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQ 220
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
S + L V + LV +Y + G L A +F+I+P +D + W+ +I+ Y G + A
Sbjct: 221 ESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDD--VSWNTMISCYASRGLWDEA 278
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
LF M ++G++ N + + ++ C H G L LF M
Sbjct: 279 FRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQM 320
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 113/238 (47%), Gaps = 9/238 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN + G +H + A++LF QM +Q D+ L A + + +K IH + +
Sbjct: 297 WNTIAGGCLHTGNFKGALKLFSQMRAV-IQLDSVAMVVGLNACSHIGAVKLGKEIHGHAV 355
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R+ F V + L+ +YS+C L +A+ +F I +K +I W+A+++ + E
Sbjct: 356 RTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKI--DEKGLITWNAMLSGFAHMDRSEEV 413
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK--HHIIPLVDHYTCII 203
L EM++ GV+PN VT S+L C+ + + G +M+K + + ++
Sbjct: 414 SFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLV 473
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPEN 261
++ R+G++ +A + ++ K ++G VS + GE A + E+ N
Sbjct: 474 EMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGD----GETALKLFAEMRRLN 527
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L L Q IH ++I G + S L++ Y+ L A + D + W+
Sbjct: 105 LKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECS--NSFDPLHWN 162
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+I+ Y K+ E A+S++ M+ GV P+ T+ SVL AC + D G+++ + + +
Sbjct: 163 MVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQES 222
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
I + + ++ + GR G+L+ A L MP + + W ++ S
Sbjct: 223 SIKWSLFVHNALVFMYGRFGKLEVARELFDIMPAR-DDVSWNTMISCYAS 271
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 173/294 (58%), Gaps = 5/294 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILA 72
F + K W ++S ++ N E ++LF +M+ E V PD +++ A A L
Sbjct: 198 FFKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLG 257
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L +H YL+ SGF + + S L+D+Y+KCGSL + +F LK+K++ W+++
Sbjct: 258 ALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVF--YKLKEKNLFCWNSM 315
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I HG+ + A+ +F EM + G++PN+VTF SVL AC+H G + EG F M++ +
Sbjct: 316 IDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYC 375
Query: 193 I-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P V+HY C++DLL + G L+DA +IR M +PN +WGALL C H N+E+ V
Sbjct: 376 ISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNGCKVHRNLEIARVTV 435
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK-LPAQSLVEV 304
R LEP N+G+Y LL N+YA V RW DV K+R + ++G+ K P S +E+
Sbjct: 436 RNLMILEPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVEKRCPGSSWIEI 489
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 106/230 (46%), Gaps = 5/230 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + F + +K T +NA++ +H+ + +A+ + ML V P + +F+SL+ A
Sbjct: 29 NFAISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIKAC 88
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+L D +H ++ + GF + V + LV+ YS G + A +F+ + +D+
Sbjct: 89 TLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFD--EMSARDVYA 146
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+ +I+AY ++ E A LF EM + N T+ +V+ + +G ++ F+ +
Sbjct: 147 WTTMISAYVRNNDVESAEILFVEMPEG---KNTATWNAVIDGYAKLGNIERVEFFFKEIP 203
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
II +C + + + ++ + P+ ++ AC
Sbjct: 204 SKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISAC 253
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC S +F K +K WN+++ G + A+EA+++F +M E ++P+ T
Sbjct: 287 MYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVT 346
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F S+L A +++ +I + ++E +VD+ SK G L A + +
Sbjct: 347 FVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGM 406
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA-VSLFNEMV 153
+ + IW A++ H + E+A V++ N M+
Sbjct: 407 RF-EPNSFIWGALLNGCKVHRNLEIARVTVRNLMI 440
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 176/280 (62%), Gaps = 3/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W ++SG N L EA ++F+QM ++P++ + S L A +A L +IH Y++
Sbjct: 556 WTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVM 615
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R+ + L++ + ++D+Y+KCG+L A +F I K++ +++A+I+AY HG A
Sbjct: 616 RNFMSFSLQITTSIIDMYAKCGNLDDAKFVF--IICSTKELPVYNAMISAYASHGKSAEA 673
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYTCIID 204
++LF E+V+ G+ P+ +TFTSVL ACSH L+ EGL LF++M+ + + P HY C++
Sbjct: 674 LALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVK 733
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
LL G+LD+A +I TMP P+ + G+LL AC + EL A+W ++EP N GN
Sbjct: 734 LLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPGN 793
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
Y+ L+N+YAA+G+W +V +R + E GL+K+P S +EV
Sbjct: 794 YVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEV 833
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 140/292 (47%), Gaps = 17/292 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGF-IHNSLAREAIQLFKQMLVEDVQPDNA 59
+YAKCN ++ F K + A + G N L +EA+ + +M+ + PDN
Sbjct: 149 LYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNF 208
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSG--FLYRLEVASILVDIYSKCGSLGYAHHIFN 117
+ L A L + IH ++++ G F + VA+ LVD+Y KCG L A +F+
Sbjct: 209 VVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFD 268
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGL 176
+P + ++ ++W+++I Y ++G AV LF +M + GV+P++V+ + AC+++
Sbjct: 269 EMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEA 328
Query: 177 VDEG------LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
V+EG + L F L + + + I++ + G +++ + R+M + +
Sbjct: 329 VEEGKQGHALVILMGFELNYVL------GSSIMNFYSKVGLIEEVELVFRSMAVLKDEVT 382
Query: 231 WGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVE 282
W ++ + V E W E E + + L++L A RDV+
Sbjct: 383 WNLMISSYVQFGMFEKALEMCHWMRE-EENLRFDCVTLSSLLALAADTRDVK 433
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAILADLKQAMN 79
K WN ++S ++ + +A+++ M E+ ++ D T +SLL A D+K
Sbjct: 378 KDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKK 437
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
+H + IR+ F + V S ++D+Y+KCG + A +F+ K KDI++W+ ++AA +
Sbjct: 438 LHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAG-KKKDIVLWNTMLAACAEK 496
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
G A+ LF +M V PN V++ S++ G V E +F M + P + +
Sbjct: 497 GLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITW 556
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVS 240
T +I L + G +A + + M ++PN + L AC +
Sbjct: 557 TTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTN 600
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 35/242 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKR-TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MYAKC + + +F KK+ WN +L+ L+ EA++LF QM +E V P+
Sbjct: 460 MYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVV 519
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
++NSL+ + R+G + + D++S+ G +
Sbjct: 520 SWNSLIFGF----------------FRNGQVVEAQ------DMFSEMQLSG-------VT 550
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P ++I W+ +I+ ++G G A +F +M +G++PN ++ TS L AC+++ L++
Sbjct: 551 P----NLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNY 606
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G S+ +++++ + + T IID+ + G LDDA + K V+ A++ A
Sbjct: 607 GRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTK-ELPVYNAMISAYA 665
Query: 240 SH 241
SH
Sbjct: 666 SH 667
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
Query: 40 REAIQLFKQMLVED-VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE--VA 96
+EAI Q+ + PD + LL DL + IH +LI+ G Y V
Sbjct: 86 QEAISTLSQLPQHTPIGPD--IYGELLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVE 143
Query: 97 SILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
S LV +Y+KC A H F + +K++++ ++AI+ ++G + A+ + EM++ G
Sbjct: 144 SKLVILYAKCNLTRVAVHFFRNV-VKNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKG 202
Query: 157 VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDD 214
P+ + L AC + + G + F++K + V T ++D+ G+ G L+D
Sbjct: 203 FCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLED 262
Query: 215 AYNLIRTMP-IKPNHAVWGALL-GACVSHENVELGEVAARWTFE--LEPENTGNYILLAN 270
A + MP K N VW +++ G + NVE + + FE +EP + L+
Sbjct: 263 AEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSE----VSLSG 318
Query: 271 LYAAVGRWRDVEK 283
++A VE+
Sbjct: 319 FFSACANLEAVEE 331
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + +F+ S K +NA++S + + + EA+ LF++++ + + PD+ T
Sbjct: 632 MYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHIT 691
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV-ASILVDIYSKCGSLGYAHHIFNII 119
F S+L A + LK+ + + Y++ + E LV + + G L A I +
Sbjct: 692 FTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTM 751
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P D I +++AA G++ E+A
Sbjct: 752 P-SPPDAHILGSLLAACGQNHETELA 776
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 185/315 (58%), Gaps = 15/315 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLARE--AIQLFKQMLVEDVQPDN 58
MY KC C + + +F +K WN+++S +H ++LF +ML VQPD
Sbjct: 278 MYGKCKCASDALNVFEVMDEKDMFSWNSIIS--VHQRCGDHYGTLKLFDRMLGNKVQPDL 335
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGF--------LYRLEVASILVDIYSKCGSLG 110
T ++LPA LA L IH Y+I +G + + + L+D+Y+KCGS+
Sbjct: 336 VTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMR 395
Query: 111 YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
A +F+ + +KD+ W+ +I YG HG+G+ A+ F M Q+ + PN+++F +L A
Sbjct: 396 DARMVFD--NMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSA 453
Query: 171 CSHVGLVDEGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA 229
CSH G+V EGL M K+ + P V+HYTC+ID+L RAG+L +AY+L+ TMP K +
Sbjct: 454 CSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCRAGKLVEAYDLMLTMPFKADPV 513
Query: 230 VWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVN 289
W ALL AC +++ +L E+AA ELEP + GNY+L++N+Y VGR+ V ++R +
Sbjct: 514 GWRALLAACRIYKDTDLAEIAASKVIELEPGHCGNYVLMSNVYGVVGRYEQVSELRHTMR 573
Query: 290 EVGLRKLPAQSLVEV 304
+ ++K P S +E+
Sbjct: 574 QQNVKKRPGCSWIEL 588
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 117/228 (51%), Gaps = 5/228 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTS--KKRTAPWNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPD 57
MY+KC N + K+F + K +NA+++GF+ N L++ + L+KQM L+ V PD
Sbjct: 73 MYSKCTLINYALKVFNYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPD 132
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
TF ++ A D+ + IH L + G + V S LV Y K + AH +F
Sbjct: 133 KFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFE 192
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+P+ +D+++W++++ Y + G E A+ +F MV++GV P + T T VL S +G
Sbjct: 193 ELPV--RDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDF 250
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
D G ++ F+ K V +ID+ G+ DA N+ M K
Sbjct: 251 DNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEK 298
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 125/241 (51%), Gaps = 16/241 (6%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++++F + + WN++++G+ EA+ +F++M+ V P T +L Y++
Sbjct: 187 AHEVFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSV 246
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+ D +H +L + G+ + V + L+D+Y KC A ++F + + +KD+ W+
Sbjct: 247 IGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEV--MDEKDMFSWN 304
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+II+ + + G + LF+ M+ + V+P+ VT T+VL AC+H+ + G + +M
Sbjct: 305 SIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHGYM--- 361
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
I++ LG+ GR +D +++ + +A G++ A + +N+ +VA
Sbjct: 362 -----------IVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVA 410
Query: 251 A 251
+
Sbjct: 411 S 411
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 21/247 (8%)
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
D T + L A +L + +H +L+++GF + ++++YSKC + YA +F
Sbjct: 28 DIGTCITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVF 87
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK-PNQVTFTSVLHACSHVG 175
N DK++ ++AIIA + +G + + L+ +M GV P++ TF V+ AC G
Sbjct: 88 NYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAG 147
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP----NHAVW 231
V E + + K + V + ++ + + DA+ + +P++ N V
Sbjct: 148 DVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVN 207
Query: 232 GALLGACVSH------ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVR 285
G C VE G V R+T TG + ++Y+ +G + + + V
Sbjct: 208 GYAQIGCFEEALGMFRRMVENGVVPCRYTV------TG----VLSIYSVIGDFDNGQAVH 257
Query: 286 DMVNEVG 292
+ ++G
Sbjct: 258 GFLTKMG 264
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 173/292 (59%), Gaps = 4/292 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F S+ WN ++ + N +A++LF ++ + ++PD T SL+P +A
Sbjct: 548 IFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMAS 607
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+ H Y+IRS F L + L+D Y+KCG +GYA+ IF DKD+++++A+I
Sbjct: 608 VHLLRQCHGYIIRSSF-EDLHLKGTLLDAYAKCGIIGYAYKIFQ--SSVDKDLVMFTAMI 664
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHI 192
Y HG E A+ F+ M+ G+KP+ V FTS+L ACSH G + EGL +F + K H +
Sbjct: 665 GGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGM 724
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P ++ + C++DLL R G + +AY+ + +PI+ N +WG LLGAC ++ VELG + A
Sbjct: 725 KPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVAD 784
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
F++E + GNYI+L+NLYAA RW V +VR M+ L+K S +EV
Sbjct: 785 KLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWIEV 836
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 97/175 (55%), Gaps = 5/175 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAR-EAIQLFKQMLVE-DVQPDN 58
MYAKC + +K+F + + WN VLSG+ + + +++F+ M +V P +
Sbjct: 87 MYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSS 146
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY-AHHIFN 117
T ++LP A +L ++H Y+I+SGF + LV +Y+KCG + A+ +F+
Sbjct: 147 VTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFD 206
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
I KD++ W+A+IA ++G + A SLF+ M++ VKPN T ++L C+
Sbjct: 207 SII--HKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCA 259
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 128/307 (41%), Gaps = 74/307 (24%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC +Y F S+K WN++L F + L ML D++PD+ T
Sbjct: 400 YAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTI 459
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLY---RLEVASILVDIYSKCGSLGYAHHIF-- 116
+++ A L +K+ IH Y IRSG L V + ++D YSKCG++ YA+ +F
Sbjct: 460 LTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQN 519
Query: 117 -----NIIP-----------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSL 148
N++ + + D+ W+ ++ Y ++ E A+ L
Sbjct: 520 LSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALEL 579
Query: 149 FNEMVQSGVKPNQVTFTSVLHACSHV---------------------------------- 174
F ++ G+KP+ VT S++ C+ +
Sbjct: 580 FLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDLHLKGTLLDAYAKC 639
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIID---LLGRAGRLDDAYNLIRTMPIKPNHAVW 231
G++ +FQ + ++ +T +I + G + + + ++ + M IKP+H ++
Sbjct: 640 GIIGYAYKIFQSSVDKDLV----MFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIF 695
Query: 232 GALLGAC 238
++L AC
Sbjct: 696 TSILSAC 702
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 14/246 (5%)
Query: 1 MYAKCN---CGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
MYAKC C +Y +F K WNA+++G N L +EA LF M+ V+P+
Sbjct: 190 MYAKCGLVACD--AYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPN 247
Query: 58 NATFNSLLPAYAILAD---LKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAH 113
AT ++LP A + + IH Y+++ L + V + L+ Y K G A
Sbjct: 248 YATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAE 307
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACS 172
+F + +D++ W+ IIA Y +G ++ +F +V + + VT S+L AC+
Sbjct: 308 SLF--WAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACA 365
Query: 173 HVGLVDEGLSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
+ + G + ++L+H + ++ + G +++AY+ +M + + W
Sbjct: 366 QLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTF-SMISRKDLISW 424
Query: 232 GALLGA 237
++L A
Sbjct: 425 NSILDA 430
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 117/257 (45%), Gaps = 10/257 (3%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV--QPDNATFNSLLPAYAILADLKQA 77
++ W + + +S EA+ F L + +PD+ ++L + + L
Sbjct: 3 QRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLG 62
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
+H Y+++ G + + L+++Y+KCG L H +F+ D +IW+ +++ Y
Sbjct: 63 KCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFD--QFGRCDPVIWNIVLSGYS 120
Query: 138 KHGHGEMAV-SLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL 195
+ G + V +F M SG V P+ VT +VL C+ G ++ G S+ +++K
Sbjct: 121 RSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMD 180
Query: 196 VDHYTCIIDLLGRAGRLD-DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWT 254
++ + + G + DAY + ++ I + W A++ EN L E + ++
Sbjct: 181 TFAGNALVSMYAKCGLVACDAYAVFDSI-IHKDVVSWNAMIAGLA--ENGLLKEAFSLFS 237
Query: 255 FELEPENTGNYILLANL 271
++ NY +AN+
Sbjct: 238 LMMKGSVKPNYATVANI 254
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC +YK+F + K + A++ G+ + ++ +A++ F ML ++PD+ F
Sbjct: 636 YAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIF 695
Query: 62 NSLLPAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + + + + I + + G +E + +VD+ ++ G + A+ IP
Sbjct: 696 TSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIP 755
Query: 121 LKDKDIIIWSAIIAA 135
+ + + IW ++ A
Sbjct: 756 I-EANANIWGTLLGA 769
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 189/292 (64%), Gaps = 8/292 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATFNSLLPAYAIL 71
+F K ++ T WN++++G+ N + +AI+LF++M+ + +PD T S+ A L
Sbjct: 344 LFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHL 403
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+L L + + V + L+++YS+CGS+ A IF + +D++ ++
Sbjct: 404 GELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQ--EMATRDLVSYNT 461
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I+ + +HGHG ++ L ++M + G++P+++T+ ++L ACSH GL+DEG LF+ +
Sbjct: 462 LISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK--- 518
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
P VDHY C+ID+LGRAGRL++A LI++MP++P+ ++G+LL A H+ VELGE+AA
Sbjct: 519 -FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAA 577
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
F++EP N+GNY LL+N+YA+ GRW++ +KVRD + + G++K S +E
Sbjct: 578 AKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 629
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 36/247 (14%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILAD 73
F K ++ WNA+LSG+ E I+LF ML +VQPD T+ +++ + + L D
Sbjct: 208 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD 267
Query: 74 LKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIF---------NIIP--- 120
+ +I L + GF V + L+D+++KCG+L AH IF + +P
Sbjct: 268 PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNA 327
Query: 121 --------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS--GVK 158
+ +D + W+++IA Y ++G A+ LF EM+ S K
Sbjct: 328 MISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRK 387
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
P++VT SV AC H+G + G + +HI + Y +I++ R G + DA +
Sbjct: 388 PDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLI 447
Query: 219 IRTMPIK 225
+ M +
Sbjct: 448 FQEMATR 454
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 43 IQLFKQMLVE-DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
+ LFK ML D++P NA+F S++ A ++M ++++SG+ V + ++
Sbjct: 73 VSLFKHMLQHCDIKP-NASFYSVMMKSAG----SESMLFLAHVLKSGYDRDHYVRNGILG 127
Query: 102 IYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
IY+K G + +A +F+ +P D+ + W+ +I+ Y K G+ E A +LF+ M + N
Sbjct: 128 IYAKYGPIEFARKLFDEMP--DRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNV 185
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
+T+T+++ + G + F M + ++ + ++ + G ++ L
Sbjct: 186 ITWTTMITGHAKKGNLKTARMYFDKMPERSVVS----WNAMLSGYAQGGAPEETIRLFND 241
Query: 222 M----PIKPNHAVWGALLGACVSHENVELGEVAAR 252
M ++P+ W ++ +C S + L E R
Sbjct: 242 MLSPGNVQPDETTWATVISSCSSLGDPCLSESIVR 276
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 182/305 (59%), Gaps = 5/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+ + + ++F+ K W ++++G+ N++ ++A+Q F++M V D T
Sbjct: 185 YARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITL 244
Query: 62 NSLLPAYAILADLKQAMNIH--CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ A A L A I R G + V S L+D+YSKCG++ A+++F
Sbjct: 245 VGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFK-- 302
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+K+ ++ +S++I + HG A+ LF EM+++G+KPN VTF + ACSH G+V++
Sbjct: 303 GMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQ 362
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G LF M + + + P DHY C+ DLLGRAG L+ A L++TMP++PN VWGALLGA
Sbjct: 363 GQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGAS 422
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H N ++ E+A+R FELEP+N GNY+LL+ YA +W DV +VR ++ E LRK P
Sbjct: 423 HIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPG 482
Query: 299 QSLVE 303
S VE
Sbjct: 483 CSWVE 487
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 136/336 (40%), Gaps = 79/336 (23%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++A++ + N +I+L+ ML +V P + TF++L +++L + +H +
Sbjct: 80 YSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSAL---FSLLKNPSLGSQLHLHAF 136
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
GF+ L V + ++ +Y K G L A +F+ +P +D++ W+ +I AY + G + A
Sbjct: 137 LFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMP--HRDVVTWTELIVAYARSGDMDSA 194
Query: 146 VSL-------------------------------FNEMVQSGVKPNQVTFTSVLHACSHV 174
L F +M ++GV +++T + AC+ +
Sbjct: 195 CELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQL 254
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMP--------- 223
G+ + + + + + +ID+ + G +++AYN+ + M
Sbjct: 255 GVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSS 314
Query: 224 -------------------------IKPNHAVWGALLGACVSHENVELGEV---AARWTF 255
IKPNH + L AC VE G+ A + +
Sbjct: 315 MIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECY 374
Query: 256 ELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
+ P +Y +A+L +GR +EK +V +
Sbjct: 375 GVSP-TADHYACMADL---LGRAGHLEKALQLVQTM 406
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC +Y +F + +++++ GF + AR AI+LF +ML ++P++ T
Sbjct: 287 MYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVT 346
Query: 61 FNSLLPAYAILADLKQAMNI-----HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
F L A + ++Q + CY G + + + D+ + G L A +
Sbjct: 347 FVGLFTACSHAGMVEQGQQLFGAMKECY----GVSPTADHYACMADLLGRAGHLEKALQL 402
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P+ + + +W A++ A HG+ ++A
Sbjct: 403 VQTMPM-EPNGGVWGALLGASHIHGNPDVA 431
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 194/307 (63%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
YAK + ++ K+F K ++ WN ++SG+ HN LA EA+ LF++M V PD+AT
Sbjct: 160 FYAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSAT 219
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+ A + + L+ ++ ++ +G + + + L++++S+CG + A +F+ I
Sbjct: 220 FVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSI- 278
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDE 179
+ ++I W+A+I+ YG HG+G A+ LF EM + G+ PN VTF +VL AC+H GL+ E
Sbjct: 279 -SEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHE 337
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM-PIKPNHAVWGALLGA 237
G +F M + + ++P ++H+ C++D+LG+AG L +AY I+ + P++ AVW A+LGA
Sbjct: 338 GRQVFASMREEYGLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGA 397
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H+N +LG AA+ LEPEN NY+LL+N+YA GR VE VR+++ + G++K
Sbjct: 398 CKMHKNYDLGVEAAQHLISLEPENPSNYVLLSNMYALAGRMDRVESVRNVMIQRGIKKQA 457
Query: 298 AQSLVEV 304
S ++V
Sbjct: 458 GYSSIDV 464
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 143/294 (48%), Gaps = 14/294 (4%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
G+++Y ++F+ + + +N+++ + + + I +++ML +P + TF S+
Sbjct: 64 GSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVF 123
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A A L+ LK +H ++ SGF V + +V Y+K +L A +F+ +P +
Sbjct: 124 KACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMP--QRS 181
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
++ W+ +I+ Y +G A++LF +M + GV P+ TF SV ACS +G ++ G ++
Sbjct: 182 VVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYD 241
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
++ + I V T +I++ R G + A + ++ + N W A++ H
Sbjct: 242 SIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSIS-EGNVIAWTAMISGYGMH---G 297
Query: 246 LGEVAARWTFELEPE-----NTGNYILLANLYAAVGRWRDVEKV-RDMVNEVGL 293
G A +E++ E NT ++ + + A G + +V M E GL
Sbjct: 298 YGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEYGL 351
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 188/305 (61%), Gaps = 4/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ-PDNAT 60
YA+ + ++F ++ K W A++SG + + A +A+ LF +M E V D
Sbjct: 187 YARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLV 246
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S++ A A A + +HC +I G+ L +++ LVD+Y+KC + A +IF
Sbjct: 247 LSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIF--CE 304
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ KD++ W++II +HG E A++L+++MV +GVKPN+VTF +++ACSHVGLV +G
Sbjct: 305 MRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKG 364
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+LF+ M++ I P + HYTC++DL R+G LD+A NLIRTMP+KP+ W ALL AC
Sbjct: 365 RALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACK 424
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N ++ A +L+PE+ +YILL+N+YA G W +V VR ++ ++K+P
Sbjct: 425 HHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGY 484
Query: 300 SLVEV 304
S V++
Sbjct: 485 SCVDL 489
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 6/209 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC+ + +F + +K W +++ G + LA EA+ L+ M++ V+P+ T
Sbjct: 288 MYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVT 347
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F L+ A + + + + + ++ G L+ + L+D++S+ G L A ++ +
Sbjct: 348 FVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTM 407
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P+K D W+A+++A HG+ +MAV + + ++ +KP + +L + E
Sbjct: 408 PVK-PDEPTWAALLSACKHHGNTKMAVRIADHLLD--LKPEDPSSYILLSNIYAGAGMWE 464
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
+S+ + ++ + V Y+C+ LGR
Sbjct: 465 NVSMVRKLMAVKEVKKVPGYSCVD--LGR 491
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC + K+F ++ W VLS ++L +A + +L E +QPD+ F
Sbjct: 53 YGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVF 112
Query: 62 NSLLPAYAILAD--LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+SL+ A A L +K +H + S F V S LVD+Y+K Y +F+ I
Sbjct: 113 SSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSI 172
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ I W+A+I+ Y + G A+ LF E S K N +T+++ G ++
Sbjct: 173 --FELSSISWTAMISGYARSGRKLEALELFRE---SPFK-NLYAWTALISGLVQSGNAND 226
Query: 180 GLSLFQFMLKHHI 192
L LF M + +
Sbjct: 227 ALYLFVEMRREGV 239
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 77 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAY 136
A +H +I+SG + L+D Y KCG L A +F+ +P +D + W+ +++A
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDH--VAWATVLSAC 84
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS-------LFQFMLK 189
A S+ ++ G++P+ F+S++ AC+++G V L L +
Sbjct: 85 NLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFE 144
Query: 190 HHII--PLVDHY------------------------TCIIDLLGRAGRLDDAYNLIRTMP 223
++ LVD Y T +I R+GR +A L R P
Sbjct: 145 DDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESP 204
Query: 224 IKPNHAVWGALLGACVSHEN 243
K N W AL+ V N
Sbjct: 205 FK-NLYAWTALISGLVQSGN 223
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 178/304 (58%), Gaps = 2/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC+ + +F + K W A+ SG+ S E+++L+K + + ++P+ T
Sbjct: 488 VYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFT 547
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +++ A + +A L+ H +I+ GF VA+ LVD+Y+K GS+ AH F I
Sbjct: 548 FAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAF--IS 605
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD W+++IA Y +HG E A+ +F +M+ G+KPN VTF VL ACSH GL+D G
Sbjct: 606 TNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLG 665
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M + I P ++HY C++ LLGRAG+L +A I MPIK VW +LL AC
Sbjct: 666 FDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRV 725
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
NVELG AA P ++G+Y+LL+N++A+ G W +V ++R+ ++ G+ K P S
Sbjct: 726 SGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCS 785
Query: 301 LVEV 304
+EV
Sbjct: 786 WIEV 789
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 7/247 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC+ + K+F + +NA++ G+ EA+ LF++M + P
Sbjct: 387 MYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLI 446
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F SLL A L L+ + IH +I+ G S L+D+YSKC +G A +F I
Sbjct: 447 FVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEI- 505
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+DKDI++W+A+ + Y + E ++ L+ + S +KPN+ TF +V+ A S++ + G
Sbjct: 506 -QDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHG 564
Query: 181 LSLFQFMLKHHI--IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
++K P V + ++D+ ++G +++A+ + K + A W +++
Sbjct: 565 QQFHNQVIKMGFDDDPFVAN--TLVDMYAKSGSIEEAHKAFISTNWK-DTACWNSMIATY 621
Query: 239 VSHENVE 245
H E
Sbjct: 622 AQHGEAE 628
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 4/241 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNAT 60
Y+K N N + K+F S K W++++S + H+S EA+ LF Q + + +P+
Sbjct: 84 YSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYI 143
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A L A+ IH +++ G++ + V + L+D Y+K + A +F+
Sbjct: 144 LASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFD--G 201
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ K W+ IIA Y K G ++++ LF++M + V P++ +SVL AC + ++ G
Sbjct: 202 LQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGG 261
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ ++L+ I+ V ID + ++ L M + N W ++ C+
Sbjct: 262 KQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRM-VDKNVVSWTTVIAGCMQ 320
Query: 241 H 241
+
Sbjct: 321 N 321
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y K C + + +F K + W +++G+ ++ +++LF QM V PD
Sbjct: 185 FYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYV 244
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+L A +L L+ IHCY++RSG + + + + +D Y KC + +F+
Sbjct: 245 LSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFD--R 302
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ DK+++ W+ +IA ++ A+ LF EM + G P+ TSVL++C + +++G
Sbjct: 303 MVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKG 362
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+ + +K +I +ID+ + L DA + M
Sbjct: 363 RQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLM 404
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 22/255 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y KC+ L K+F + K W V++G + NS R+A+ LF +M PD
Sbjct: 286 FYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFG 345
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L + L L++ +H Y I+ V + L+D+Y+KC SL A +FN++
Sbjct: 346 CTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMA 405
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D++ ++A+I Y + A+ LF EM S P + F S+L +
Sbjct: 406 A--IDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSA-------- 455
Query: 181 LSLFQFMLKHHIIPLVDHY---------TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
SL+ L + I L+ Y + +ID+ + R+ DA + + K + VW
Sbjct: 456 -SLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDK-DIVVW 513
Query: 232 GALL-GACVSHENVE 245
A+ G EN E
Sbjct: 514 TAMFSGYTQQSENEE 528
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 173/285 (60%), Gaps = 2/285 (0%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNI 80
K W A++SG N + +A+ L+++M ++ PD ATF ++L A A+L+ L+ I
Sbjct: 610 KSIVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEI 669
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG 140
H + +GF +S LVD+Y+KCG + A +F +P+K KD+I W+++I + K+G
Sbjct: 670 HSLIFHTGFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIK-KDVISWNSMIVGFAKNG 728
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII-PLVDHY 199
+ E A+ +F+EM S V P+ VTF VL ACSH GLV EG +F M+ ++ I P VDH+
Sbjct: 729 YAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNMVNYYSIHPRVDHH 788
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 259
C++DLLGR G L++A I + ++PN +W LLGAC H + + G AA ELEP
Sbjct: 789 ACMVDLLGRCGFLEEAEEFIDKLDVEPNAMIWANLLGACSIHGDEKRGLRAAEKLIELEP 848
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+N+ Y+LL N++A G W + + +R + + ++K P S + V
Sbjct: 849 QNSSPYVLLYNMHAGSGHWDEAKSLRRTMVQNEVQKTPGCSWIVV 893
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F + WN +L + N + ++LF +M+ PD T
Sbjct: 286 MYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFT 345
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++S+L + A L +H +I+ F L V + LVD+Y+K G+L A F
Sbjct: 346 YSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFE--R 403
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K +D I W+AI+ Y + A ++F M + GV P++V S+L AC ++ +++ G
Sbjct: 404 MKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAG 463
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP 223
L +K + + + +ID+ + G ++DA + MP
Sbjct: 464 LQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMP 506
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++SG +EA++ +++M + V +T S+L A A L DL + +H +
Sbjct: 210 WNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGEAV 269
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ GF + VAS L+++Y KC L A +F+++ D+++++W+ I+ Y ++G
Sbjct: 270 KLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVC--DRNVVMWNTILGVYAQNGCLSDV 327
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+ LF+EM+ G P++ T++S+L +C+ +D G L ++K + ++D+
Sbjct: 328 MELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDM 387
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
+AG L +A M + N + W A+L V E
Sbjct: 388 YAKAGALKEARKQFERMKYRDNIS-WNAILVGYVQEE 423
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 143/311 (45%), Gaps = 13/311 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + K F + + WNA+L G++ EA +F++M V PD
Sbjct: 387 MYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVC 446
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + L+ + H ++ G L S L+D+YSKCG + A I++ +P
Sbjct: 447 MASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMP 506
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ ++ +A+IA Y E A++L +EM G+KP+++TF S++ C V G
Sbjct: 507 --EWSVVSMNALIAGYAIKDTKE-AINLLHEMQILGLKPSEITFASLIDCCKESPKVILG 563
Query: 181 LSLFQFMLKHHIIPLVDHY-TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ + +LK+ ++ + T ++ + + +L + L + + +W AL+
Sbjct: 564 MQIHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISG-- 621
Query: 240 SHENVELGEVAARWTFELEPEN----TGNYILLANLYAAVGRWRDVEKVRDMVNEVG--L 293
H + + A E+ N ++ + A + +D +++ ++ G L
Sbjct: 622 -HTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDL 680
Query: 294 RKLPAQSLVEV 304
+L + +LV++
Sbjct: 681 DELTSSALVDM 691
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+F++ L + L +L+ ++H +I++GF + L+ Y+KC L A +FN +
Sbjct: 74 SFSTTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNSV 133
Query: 120 P-LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
L + D ++A+I Y + G + A+ LF+EM QSG +++ +VL+AC ++G +D
Sbjct: 134 SRLDNLDTATFTALIGGYVRVGMFDDALQLFDEM-QSGFVLDELVIVTVLNACVNLGKLD 192
Query: 179 EGLSLFQFM 187
LF M
Sbjct: 193 HACELFDEM 201
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTS-KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MYAKC + K+F + KK WN+++ GF N A A+++F +M + V PD+
Sbjct: 691 MYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTLSSVSPDDV 750
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNI 118
TF +L A + + + I ++ ++ R++ + +VD+ +CG L A +
Sbjct: 751 TFLGVLTACSHAGLVSEGRQIFDNMVNYYSIHPRVDHHACMVDLLGRCGFLEEAEEFIDK 810
Query: 119 IPLKDKDIIIWSAIIAAYGKHG---HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
+ + + + +IW+ ++ A HG G A E+ P + + +HA S G
Sbjct: 811 LDV-EPNAMIWANLLGACSIHGDEKRGLRAAEKLIELEPQNSSPYVLLYN--MHAGS--G 865
Query: 176 LVDEGLSLFQFMLKHHI 192
DE SL + M+++ +
Sbjct: 866 HWDEAKSLRRTMVQNEV 882
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 45/240 (18%)
Query: 2 YAKCNCGNLSYKMFMKTSKKR---TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
YAKC C N + +F S+ TA + A++ G++ + +A+QLF +M
Sbjct: 117 YAKCKCLNSARTLFNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEM--------- 167
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+SGF+ ++V + + C +LG H +
Sbjct: 168 ---------------------------QSGFVLD---ELVIVTVLNACVNLGKLDHACEL 197
Query: 119 IPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
D +++ W+ +I+ +GK G+ + AV + +M +GV ++ T SVL A + +G
Sbjct: 198 FDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGD 257
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+ GL + +K V + +I++ G+ L DA + + + N +W +LG
Sbjct: 258 LGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDR-NVVMWNTILG 316
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 185/308 (60%), Gaps = 10/308 (3%)
Query: 5 CNCG--NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C+CG N + +F K + A ++A++SG++ N E +QLF+++ +D FN
Sbjct: 162 CSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFN 221
Query: 63 -----SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
S+L A ++ ++ IH Y+ +G Y LE+ + L+D Y KCG + A +FN
Sbjct: 222 GALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFN 281
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+P+KD + WSA+I +G+ +MA+ LF +M + G KPN+VTF VL AC+H L
Sbjct: 282 KMPVKD--VATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLF 339
Query: 178 DEGLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
E LF M K++I P ++HY C++D+L R+G++ A I +M I+P+ A+WG+LL
Sbjct: 340 GESARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLN 399
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
C+ H + ELG+ ++ E EP+++G Y+LLAN+YA +G+W V +VR ++ + G+ +
Sbjct: 400 GCLMHGHYELGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIV 459
Query: 297 PAQSLVEV 304
S +E+
Sbjct: 460 SGWSFIEI 467
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 37/252 (14%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N++++ + NS + +F +ML +++P++ TF +L+ A L+ L+Q + L
Sbjct: 56 YNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLSMKLG 115
Query: 86 RSGFLYRLEVA----------------------------SILVDIYSKCGSLGYAHHIFN 117
S +Y + + LV Y CG + A +F+
Sbjct: 116 NSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFD 175
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-----VKPNQVTFTSVLHACS 172
+PL+++ +SA+++ Y ++G V LF E+ + +K N SVL+AC+
Sbjct: 176 KMPLRNE--ASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACT 233
Query: 173 HVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
VG +EG + ++ ++ + ++ T +ID + G + A + MP+K + A W
Sbjct: 234 MVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVK-DVATWS 292
Query: 233 AL-LGACVSHEN 243
A+ LG ++ N
Sbjct: 293 AMILGLAINGNN 304
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 7/305 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C N + K+F S WN ++S HN +REA++LF+ + +P+ T
Sbjct: 466 MYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHL---QFKPNEFT 522
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + L +H Y R G+ +++ LVD+YS CG L A +F
Sbjct: 523 IVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFR--- 579
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K W+++IAAYG HG+GE A+ LF+EM G+K + TF S+L ACSH GLV++G
Sbjct: 580 HSQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQG 639
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L ++ ML K+ I P +H ++++L R+GR+D+AY + + + VWG LL C
Sbjct: 640 LQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLSVCN 699
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H +ELG+ A FE+EP+N G YI LAN+Y A G W+D +R +++ GLRK
Sbjct: 700 YHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDLRQYIHDQGLRKCAGY 759
Query: 300 SLVEV 304
SL++V
Sbjct: 760 SLIDV 764
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNA 59
+Y++C +++ +F + + K WNA++ G+ N EA L +M QPD
Sbjct: 159 LYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIV 218
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNI 118
T ++LP A L ++ IH Y IR + L + + L+D+YSKC + A +F+
Sbjct: 219 TLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFH- 277
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
D++ W+A+I+ Y ++ + E A +LF E++ G + T ++L +C+ ++
Sbjct: 278 -STAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLN 336
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G S+ + LK + ++ + +G L +++++ + A W ++ C
Sbjct: 337 FGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGC 396
Query: 239 VSHENVELGEVAARWTFEL---EPENTGNYILLANLYAAVG 276
V + + A TF L P + I L N+ +AV
Sbjct: 397 VRGDQFQ----EALETFMLMRQGPSFNYDSITLVNVLSAVA 433
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 38/319 (11%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KCN + +F T++ WNA++SG+ N +A LFK++L ++T
Sbjct: 262 MYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSST 321
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++L + L ++H + ++SGFL + + L+ +Y G L F+I+
Sbjct: 322 VFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSG---FSILQ 378
Query: 121 LKDK--DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLV 177
DI W+ II + + A+ F M Q + +T +VL A +++ L+
Sbjct: 379 ENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELL 438
Query: 178 DEGLSLFQFMLK----------HHIIPLVDH---------------------YTCIIDLL 206
++G SL LK + +I + D + C+I L
Sbjct: 439 NQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISAL 498
Query: 207 GRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE-PENTGNY 265
+A L R + KPN ++L AC + G+ +TF +N+
Sbjct: 499 SHNKESREALELFRHLQFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFIS 558
Query: 266 ILLANLYAAVGRWRDVEKV 284
L +LY+ GR + KV
Sbjct: 559 AALVDLYSTCGRLDNAVKV 577
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
Query: 49 MLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 108
M+ + + D+ T ++ + L + Q IHC I+SG L + + + L+++Y+KCG
Sbjct: 1 MIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGD 60
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+ + ++ KD++ W++I+ +G E ++ F M S + + V+ + +
Sbjct: 61 VNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAI 120
Query: 169 HACSHVGLVDEGLSLF--QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP 226
ACS +G + G + L + V +I L + +D A + R M K
Sbjct: 121 SACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYK- 179
Query: 227 NHAVWGALLGACVSHENV 244
+ W A++ S+EN+
Sbjct: 180 DIVSWNAMMEGYASNENI 197
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 175/291 (60%), Gaps = 3/291 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
MF K KK W ++ G+ + +A+ LF +ML +V+PD+ T ++++ + A LA
Sbjct: 286 MFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLAS 345
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L +H +I G + V+S LVD+Y KCG A IF +P+K+ +IIW+++I
Sbjct: 346 LYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVIFETMPIKN--VIIWNSMI 403
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
Y ++G E A++L+ M+Q KP+ ++F VL AC + +V EG F + + +
Sbjct: 404 LGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTNMVKEGRKHFDSISEQGMT 463
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 253
P +DHY C+I LLGR+G +D A +LI+ MP KP+ +W ALL C S +++ EVAA
Sbjct: 464 PTLDHYACMIILLGRSGNIDKALDLIKGMPHKPDCRIWSALLSVC-SKGDIKTAEVAANH 522
Query: 254 TFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
F+L+P N G+YI+L+NLYAA GRW+DV VR ++ +K A S VE+
Sbjct: 523 IFQLDPHNAGSYIMLSNLYAACGRWKDVAVVRSLMKSKNAKKFSAYSWVEI 573
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 40/272 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSG---------------------------- 32
+YAKC + + ++F K SK+ WNA+LS
Sbjct: 75 LYAKCGKISDAQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTM 134
Query: 33 ---FIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGF 89
F N L+ +A++ F +M + +P ++ + L A + L D + IH ++ F
Sbjct: 135 IACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRVVVGEF 194
Query: 90 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLF 149
+ V + + D+Y+KCG + A +F+ + +K+++ W+ +I+ Y K G + +S F
Sbjct: 195 EKNVFVWNAVTDLYAKCGDIDRARWLFD--GMVNKNLVSWNLMISGYVKMGKPDECISFF 252
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
N+M SG+KP+QVT +SVL+A G VD+ ++F + K I +T +I ++
Sbjct: 253 NKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEIC----WTTMIVGYAQS 308
Query: 210 GRLDDAYNLIRTM---PIKPNHAVWGALLGAC 238
GR +DA L M ++P+ ++ +C
Sbjct: 309 GREEDALMLFSEMLRGNVRPDSHTISTVVSSC 340
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F K WN+++ G+ N A EA+ L+++ML E+ +PDN +
Sbjct: 374 MYCKCGVPLDARVIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNIS 433
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L A +K+ + G L+ + ++ + + G++ A + +P
Sbjct: 434 FVGVLSACINTNMVKEGRKHFDSISEQGMTPTLDHYACMIILLGRSGNIDKALDLIKGMP 493
Query: 121 LKDKDIIIWSAIIAAYGK 138
K D IWSA+++ K
Sbjct: 494 HK-PDCRIWSALLSVCSK 510
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 175/307 (57%), Gaps = 6/307 (1%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY K ++++F M S+K WN++++ N + EA F M V PD+
Sbjct: 191 MYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDD 250
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
AT SLL A + +H + G L + + L+++YSK G L + +F
Sbjct: 251 ATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEE 310
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLV 177
I DK + W+A++A Y HG G+ A+ F +V + G++P+ VTFT +L ACSH GLV
Sbjct: 311 ISKPDK--VAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLV 368
Query: 178 DEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
EG F+ M + + P +DHY+C++DLLGR G LDDA+ LI+ MP +PN VWGALLG
Sbjct: 369 KEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLG 428
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
AC H N++LG+ AA+ L+P + NYI+L+N+Y+A G W D KVR ++ L +
Sbjct: 429 ACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTRN 488
Query: 297 PAQSLVE 303
S +E
Sbjct: 489 QGCSFIE 495
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 130/260 (50%), Gaps = 15/260 (5%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYA 69
+Y +F + KK WN+++SG E + +F +M + +++ + TF S++ A
Sbjct: 99 AYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACV 158
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
+ +HC ++ G +Y ++V + LV++Y K G + A +F+ +P +K I+ W
Sbjct: 159 SEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSW 218
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH--VGLVDEGLS--LFQ 185
++I+A ++G A + F+ M +G P+ T S+L AC + +G + E L +F
Sbjct: 219 NSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFT 278
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH---- 241
L ++ + T +++L + GRL+++ + + KP+ W A+L H
Sbjct: 279 CGLDENLTIV----TTLLNLYSKLGRLNNSRKVFEEIS-KPDKVAWTAMLAGYAMHGCGK 333
Query: 242 ENVELGEVAARWTFELEPEN 261
E +E E R +EP++
Sbjct: 334 EAIEFFERIVREE-GMEPDH 352
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 181/304 (59%), Gaps = 2/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+K +++ +F + K W ++SG+ +EA+ L +M ++ D+ F
Sbjct: 262 YSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFF 321
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S+L A A L +H +RS F +V + +D+Y+KCG + A +FN +
Sbjct: 322 ISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMK- 380
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+KD++ W+++I +G HGHGE ++ LFN MV+ G KP++ TF +L AC+H GLV+EG
Sbjct: 381 TEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGR 440
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M + + I+P ++HY C++DLLGR G L +A+ L+R+MP +PN + G LLGAC
Sbjct: 441 GYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRM 500
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H +V+L +++ F+L P + GN+ LL+N+YA G W +V KVR +N+ G +K S
Sbjct: 501 HNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVS 560
Query: 301 LVEV 304
+EV
Sbjct: 561 SIEV 564
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 124/258 (48%), Gaps = 16/258 (6%)
Query: 5 CNCGN--LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C CG+ ++ K+F ++ WN+++ G + N A+++F +M + D ++N
Sbjct: 170 CRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEM----PERDRVSWN 225
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
++L + ++ +A + + + S +V YSK G + A +F+ P+
Sbjct: 226 TMLDGFTKAGEMDKAFKLFERMAERDIV----SWSTMVCGYSKNGDMDMARMLFDRCPV- 280
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
K++++W+ II+ Y + G + A++L +EM +SG++ + F S+L AC+ G++ G
Sbjct: 281 -KNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKK 339
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH- 241
+ L+ ID+ + G +DDA+ + M + + W +++ H
Sbjct: 340 MHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHG 399
Query: 242 ---ENVELGEVAARWTFE 256
+++EL R F+
Sbjct: 400 HGEKSIELFNTMVREGFK 417
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 19/235 (8%)
Query: 30 LSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD-LKQAMNIHCYLIRSG 88
LSG NSL A + +M V+ V DN T+ LL + L +H ++ + G
Sbjct: 97 LSGNESNSLC--AFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLG 154
Query: 89 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSL 148
F + + V + L+D Y +CG + A +F+ ++++D++ W++++ K+G + A+ +
Sbjct: 155 FYWDIFVPNSLIDCYCRCGDVEMAMKVFS--GMEERDVVSWNSMVGGLVKNGDLDGALKV 212
Query: 149 FNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
F+EM + ++V++ ++L + G +D+ LF+ M + I+ ++ ++ +
Sbjct: 213 FDEMPER----DRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVS----WSTMVCGYSK 264
Query: 209 AGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
G +D A L P+K N +W ++ E G+V E E +G
Sbjct: 265 NGDMDMARMLFDRCPVK-NLVLWTTIISG-----YAEKGQVKEAMNLCDEMEKSG 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYAKC C + ++++F MKT K + WN+++ GF + ++I+LF M+ E +PD
Sbjct: 362 MYAKCGCVDDAFRVFNGMKTEKDLVS-WNSMIHGFGIHGHGEKSIELFNTMVREGFKPDR 420
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
TF LL A + + + R G + ++E +VD+ + G L A +
Sbjct: 421 YTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVR 480
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSL 148
+P + II+ ++ A H ++A S+
Sbjct: 481 SMPFEPNAIIL-GTLLGACRMHNDVKLATSV 510
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 188/328 (57%), Gaps = 27/328 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML---------- 50
MY++ ++ +F ++K WN +++G++ +A+ L M
Sbjct: 434 MYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINT 493
Query: 51 ---VED-----VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDI 102
ED ++P++ T ++LP A LA L + IH Y ++ + V S LVD+
Sbjct: 494 FDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDM 553
Query: 103 YSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-----V 157
Y+KCG L + +F + +++ +I W+ +I AYG HG GE A+ LF MV+ G +
Sbjct: 554 YAKCGCLNLSRTVFEQMSVRN--VITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREI 611
Query: 158 KPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAY 216
+PN+VT+ ++ + SH G+VDEGL+LF M KH I P DHY C++DLLGR+G++++AY
Sbjct: 612 RPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAY 671
Query: 217 NLIRTMPIKPNHA-VWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAV 275
NLI+TMP W +LLGAC H+N+E+GE+AA+ F L+P Y+LL+N+Y++
Sbjct: 672 NLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVASYYVLLSNIYSSA 731
Query: 276 GRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
G W VR + E G+RK P S +E
Sbjct: 732 GLWDQAIDVRKKMKEKGVRKEPGCSWIE 759
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 152/301 (50%), Gaps = 12/301 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + ++F + + + WN++++ A+ LF+ ML+E+V P + T
Sbjct: 129 MYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFT 188
Query: 61 FNSLLPAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+ A + L + L +H +++R+G +R + LV +Y+K G + A +F++
Sbjct: 189 LVSVAHACSNLINGLLLGKQVHAFVLRNGD-WRTFTNNALVTMYAKLGRVYEAKTLFDV- 246
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
DKD++ W+ II++ ++ E A+ + M+QSGV+PN VT SVL ACSH+ ++
Sbjct: 247 -FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305
Query: 180 GLSLFQFMLKHHIIPLVDHYTC-IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G + F+L ++ + C ++D+ + + + M + AVW A++
Sbjct: 306 GKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGM-FRRTIAVWNAMIAGY 364
Query: 239 VSHE-NVELGEVAARWTFELEPENTGNYILLANLYAAVGR---WRDVEKVRDMVNEVGLR 294
V +E + E E+ FEL + N + L+++ A R + D E + V + G
Sbjct: 365 VRNEFDYEAIELFVEMVFELGL--SPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFE 422
Query: 295 K 295
K
Sbjct: 423 K 423
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MY C +F ++ A WNA+++G++ N EAI+LF +M+ E + P++
Sbjct: 332 MYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSV 391
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +S+LPA IH +++ GF V + L+D+YS+ G + A IF
Sbjct: 392 TLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFG-- 449
Query: 120 PLKDKDIIIWSAIIAAY---GKH------------GHGEMAVSLFNEMVQSG---VKPNQ 161
+ KDI+ W+ +I Y G+H G E ++ F++ + +KPN
Sbjct: 450 SMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNS 509
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
VT +VL C+ + + +G + + +K + V + ++D+ + G L+ + +
Sbjct: 510 VTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQ 569
Query: 222 MPIKPNHAVWGALLGA 237
M ++ N W L+ A
Sbjct: 570 MSVR-NVITWNVLIMA 584
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 36 NSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV 95
+S +AI + M+ V PDN F ++L A A + DL +H ++ + G V
Sbjct: 63 SSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAV 122
Query: 96 ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
+ V++Y KCG + A +F+ I ++D + W+++I A + E+AV LF M+
Sbjct: 123 PNSFVNMYGKCGDIDAARRVFDEI--TNRDDVSWNSMINAACRFEEWELAVHLFRLMLLE 180
Query: 156 GVKPNQVTFTSVLHACSHV 174
V P T SV HACS++
Sbjct: 181 NVGPTSFTLVSVAHACSNL 199
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 176/305 (57%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAK C + +F +K + WNA+++G++ L ++ F +M ++PD T
Sbjct: 98 LYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYT 157
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+ A A LA L+ H +++ + V S L+D+Y KC + +F+
Sbjct: 158 FASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFD--K 215
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ I W+ +I+ YGKHG + F+ M+ +PN VTF +VL ACSHVGL+DE
Sbjct: 216 CLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEA 275
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
FQ M++ + ++P HY ++DLLGR+G+L +AY + P K + +WGALLGAC
Sbjct: 276 YKYFQSMIRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACK 335
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H +++L ++A++ FE E NTG Y++LAN YA+ G W DVE+VR + E G+ K P
Sbjct: 336 IHGDLDLLKIASKKYFEFERVNTGKYVVLANAYASSGLWDDVEEVRASLRESGVTKEPGY 395
Query: 300 SLVEV 304
S +EV
Sbjct: 396 SRIEV 400
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 12 YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAIL 71
+ F + K T + VL G + +AI+L + V P T++ +L
Sbjct: 11 FSAFRSSLAKNTQNLDKVLQGLCVSGKLEDAIRLLYRTGFP-VHPR--TYSLMLQECIFW 67
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+ + IH ++I G++ + L+ +Y+K G L A +FN L +KD W+A
Sbjct: 68 KNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFN--NLVEKDSFAWNA 125
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+IA Y + G E+ + F EM Q+ ++P+Q TF SV AC+ + L++ G MLK
Sbjct: 126 MIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLKCQ 185
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
I V + +ID+ + + D L+ + N W L+ H V
Sbjct: 186 IGDNVVVNSALIDMYFKCSCICDG-RLLFDKCLSRNTITWTTLISGYGKHGQV 237
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 176/304 (57%), Gaps = 5/304 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C + + ++F K W +++ G N+ +A+ FK+M+ +P+ T
Sbjct: 446 MYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQ-KPNWVT 504
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A A + IH Y +R+G + + ++D+Y +CG + YA F I
Sbjct: 505 LVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSI- 563
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+D+ W+ ++ Y + G G +A LF M++S V PN+VTF S+L ACS G+V EG
Sbjct: 564 --DQDVSTWNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACSRSGMVAEG 621
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L + M K+ I P + HY C++DLLGRAG+L+DAY I+ +P+KP+ AVWGALL AC
Sbjct: 622 LEYYDSMKYKYSIKPNLKHYACVVDLLGRAGKLEDAYEFIQKIPMKPDPAVWGALLNACR 681
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H VELGE+AA+ F + + G YILL+NLYA W V +VR M+ + G+ P
Sbjct: 682 IHRRVELGELAAKNIFHDDTTSVGYYILLSNLYADNNIWDKVAEVRKMMRQNGIIVDPGC 741
Query: 300 SLVE 303
S VE
Sbjct: 742 SWVE 745
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 122/235 (51%), Gaps = 5/235 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ + K+F +T + W A++SG+ +N + ++A++ +K M E + PD T
Sbjct: 345 MYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPDEIT 404
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A + L DL MN+H ++G ++ + VA+ L+D+Y+KC + A +F+ I
Sbjct: 405 IGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSI- 463
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+DK+II W++II + A+ F EM++ KPN VT VL AC+ +G G
Sbjct: 464 -RDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQ-KPNWVTLVCVLSACARIGAFTCG 521
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + L+ + ++D+ R GR++ A+ + I + + W LL
Sbjct: 522 KEIHAYALRTGVSDDGYMPNAVLDMYVRCGRMEYAWK--QFFSIDQDVSTWNILL 574
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 120/235 (51%), Gaps = 3/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + +F K KK WNA+++G N E + LF +M+ V PD T
Sbjct: 244 MYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMT 303
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A ++ D + IH Y++R+ F V + L+ +YS G + A +F+
Sbjct: 304 MTSVITACELIGDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFS--Q 361
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +D+++W+A+I+ Y + + A+ + M G+ P+++T VL ACS + +D G
Sbjct: 362 TECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTG 421
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
++L + K +I V +ID+ + +D A + ++ K N W +++
Sbjct: 422 MNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDK-NIISWTSII 475
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 5/232 (2%)
Query: 8 GNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNL ++ +F + ++ WN ++ G+ EA+ L+ +ML V+PD TF +L
Sbjct: 148 GNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVL 207
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
+ DL + IH +++R GF ++V + L+ +Y+KCG + A +F+ +P KD+
Sbjct: 208 RTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDR- 266
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
I W+A+IA ++G ++LF M++ V P+ +T TSV+ AC +G G +
Sbjct: 267 -ISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHG 325
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++++ Y +I + G +++A + + + +W A++
Sbjct: 326 YVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECR-DVVMWTAMISG 376
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 75 KQAMNIHCYLIRSGFLYRLEV--ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
K+ + Y+ +S + L V ++L+ ++ K G+L A ++F +P ++++ W+ +
Sbjct: 114 KEGSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAWYVFGRMP--ERNLFSWNVL 171
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
+ Y K G + A++L++ M+ GV+P+ TF VL C V + +G + +L+
Sbjct: 172 VGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGF 231
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
VD +I + + G +D A + MP K + W A++ C EN E E
Sbjct: 232 ESDVDVINALITMYAKCGDIDTARLVFDKMP-KKDRISWNAMIAGCF--ENGECLE 284
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F +K W+A++ G+ N L REAI+LF +M +V+PD
Sbjct: 249 MYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYA 308
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
L + A L L+ + FL + + L+D Y+KCGS+ A ++ +
Sbjct: 309 MVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKM-- 366
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+KD ++++A+I+ +G A +F +M + G+ PN+ TF +L C+H GLVD+G
Sbjct: 367 MKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDG 426
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M + P ++HY C++DLL RAG LD+A+NLI+ MP+K N VWG+LLG C
Sbjct: 427 RHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCR 486
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H +L E + ELEP N+G+Y+LL+N+Y+A RW + EK+R VNE G++KLP
Sbjct: 487 LHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGY 546
Query: 300 SLVEV 304
S VEV
Sbjct: 547 SWVEV 551
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 12/230 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y+KC ++K+F K W ++ G I REA+ LF+ +L ++PD
Sbjct: 148 FYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFV 207
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A A L DL+ I + G + VA+ LVD+Y+KCGS+ A +F+
Sbjct: 208 IVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFD--G 265
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD-- 178
+ +KDI+ WSA+I Y +G A+ LF EM + V+P+ L +C+ +G ++
Sbjct: 266 MVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELG 325
Query: 179 ---EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+GL ++ L + ++ T +ID + G +++A + + M K
Sbjct: 326 NWAKGLMNYEEFLSNPVLG-----TSLIDFYAKCGSMEEALGVYKMMKEK 370
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 12/264 (4%)
Query: 14 MFMKT-SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+F KT + T +N ++ G + A+ L+ M + PD+ TF+ +L A A L
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ IH + ++GF + V + +V YSKCG L A +F+ + + K+++ W+ +
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVV--KNVVSWTGM 176
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I + G AV LF +++SG++P+ VL AC+ +G ++ G + + M + +
Sbjct: 177 ICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGL 236
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
V T ++D+ + G +++A + M ++ + W A++ S+ L A
Sbjct: 237 SRNVFVATSLVDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMIQGYASN---GLPREAIE 292
Query: 253 WTFELEPENTGNYILLANLYAAVG 276
FE+ N + + YA VG
Sbjct: 293 LFFEMRKVN-----VRPDCYAMVG 311
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 181/301 (60%), Gaps = 8/301 (2%)
Query: 10 LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV----EDVQPDNATFNSLL 65
++ +F K + + WN++++G + A+E++++F +M + V+PD T S+L
Sbjct: 213 MALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVL 272
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A A+L + +H YL ++ + + + LV++Y KCG + A IFN +P +KD
Sbjct: 273 SACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMP--EKD 330
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
W+A+I+ + HG G+ A F EM ++GVKPN VTF +L ACSH GLV++G F
Sbjct: 331 ASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFD 390
Query: 186 FMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
M + + I P + HY C++D+L RA D+A LIR+MP+KP+ VWGALLG C H N+
Sbjct: 391 VMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNI 450
Query: 245 ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR-KLPAQSLVE 303
+LGE A + +LEP N YI L ++Y G++ +++R+ + E G+ K+P S++E
Sbjct: 451 KLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIE 510
Query: 304 V 304
+
Sbjct: 511 I 511
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 43/282 (15%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN-IHCYLIRSGFLYRLEVASIL 99
+A+ L+KQML + + P+N TF L+ + L IH ++++ GFL + V + L
Sbjct: 111 KALMLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSL 170
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM------- 152
+ ++ G A +F+ + ++D ++ W++++ Y ++G EMA++LF +M
Sbjct: 171 ISLFMNFGLSKNARKVFDEMFVRD--VVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIIT 228
Query: 153 --------VQSG--------------------VKPNQVTFTSVLHACSHVGLVDEGLSLF 184
VQ+G VKP+++T SVL AC+ +G +D G +
Sbjct: 229 WNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVH 288
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
++ K+ I V T ++++ G+ G + A + MP K + + W A++ H
Sbjct: 289 AYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEK-DASAWTAMISVFALH--- 344
Query: 245 ELGEVAARWTFELEPENTG-NYILLANLYAAVGRWRDVEKVR 285
G+ A E+E N++ L +A VE+ R
Sbjct: 345 GFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGR 386
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + ++F +K + W A++S F + ++A F +M V+P++ T
Sbjct: 309 MYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVT 368
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 116
F LL A + ++Q C +Y +E + +VDI S+ A +
Sbjct: 369 FVGLLSACSHSGLVEQG---RCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLI 425
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGH 141
+P+K D+ +W A++ HG+
Sbjct: 426 RSMPMK-PDVYVWGALLGGCQMHGN 449
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 176/294 (59%), Gaps = 4/294 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI-L 71
K+F K W+A+L+G+ EA +LF Q++ E ++P+ TF+S++ A A
Sbjct: 449 KVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPT 508
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
A +Q H Y I+ L V+S LV +Y+K G++ AH +F K++D++ W++
Sbjct: 509 AAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFK--RQKERDLVSWNS 566
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-H 190
+I+ Y +HG + A+ +F+EM + + + VTF V+ AC+H GLV++G F M+ H
Sbjct: 567 MISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDH 626
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
HI P + HY+C+IDL RAG L+ A +I MP P VW LLGA H NVELGE+A
Sbjct: 627 HINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELA 686
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A L+PE++ Y+LL+N+YAA G W++ VR ++++ ++K P S +EV
Sbjct: 687 AEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEV 740
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 120/245 (48%), Gaps = 10/245 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K N ++F + ++ W ++L+G+ N L +LF QM E V P+ T
Sbjct: 137 MYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYT 196
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++++ A + + +H +++ GF + V + L+ +YS+ G L A +F+ +
Sbjct: 197 VSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKME 256
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +D + W+++IA Y ++G +FN+M +GVKP +TF SV+ +C+ +
Sbjct: 257 I--RDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASL----RE 310
Query: 181 LSLFQFM----LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
L+L + M LK T ++ L + +DDA +L M N W A++
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMIS 370
Query: 237 ACVSH 241
C+ +
Sbjct: 371 GCLQN 375
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N +L + + +EA+ LF +L +QPD +T + + A D K +HC ++
Sbjct: 62 NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
G + + V + LVD+Y K ++ +F+ + +++++ W++++A Y +G
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFD--EMGERNVVSWTSLLAGYSWNGLYGYVW 179
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLL 206
LF +M GV PN+ T ++V+ A + G+V GL + ++KH + + +I L
Sbjct: 180 ELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLY 239
Query: 207 GRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH-ENVELGEV 249
R G L DA ++ M I+ + W +++ V + +++E+ E+
Sbjct: 240 SRLGMLRDARDVFDKMEIR-DWVTWNSMIAGYVRNGQDLEVFEI 282
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 128/257 (49%), Gaps = 31/257 (12%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F K + WN++++G++ N E ++F +M + V+P + TF S++ + A L +
Sbjct: 251 VFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRE 310
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L + C ++SGF V + L+ SKC + A +F+++ + K+++ W+A+I
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLME-EGKNVVSWTAMI 369
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL-----------HA---------CSH 173
+ ++G + AV+LF++M + GVKPN T++++L HA S
Sbjct: 370 SGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSS 429
Query: 174 VG--LVDEGLSLFQFMLKHHIIPLVD-----HYTCIIDLLGRAGRLDDAYNLIRTM---P 223
VG L+D + L + + +++ ++ ++ + G ++A L +
Sbjct: 430 VGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEG 489
Query: 224 IKPNHAVWGALLGACVS 240
IKPN + +++ AC S
Sbjct: 490 IKPNEFTFSSVINACAS 506
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + ++++F + ++ WN+++SG+ + A++A+++F +M ++ D T
Sbjct: 539 MYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVT 598
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F ++ A +++ +I + ++ S ++D+YS+ G L A I N +
Sbjct: 599 FIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEM 658
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P +W ++ A H + E+
Sbjct: 659 PFP-PGATVWRTLLGAARVHRNVELG 683
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 179/278 (64%), Gaps = 5/278 (1%)
Query: 28 AVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRS 87
A+L+ + N AREAI+++++M ++ + + A A L D++ + N+ Y I
Sbjct: 280 ALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMS-NLLTYDIEE 338
Query: 88 GFLYRLEVAS-ILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
GF + + S L+ + SKCG++ A FNI ++++D+ +SA+IAA+ +HG + A+
Sbjct: 339 GFCEKTHIVSNALIHMQSKCGNIDLAWREFNI--MRNRDLYTYSAMIAAFAEHGKSQDAI 396
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDL 205
LF +M Q G+ PNQVTF VL+ACS GL++EG FQ M + I PL +HYTC++DL
Sbjct: 397 DLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDL 456
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNY 265
LGRAG+L+ AY+LI+ + WG+LL AC + NVELGE+AAR FE++P ++GNY
Sbjct: 457 LGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNY 516
Query: 266 ILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+LLAN YA+ +W E+V+ ++++ G++K S ++
Sbjct: 517 VLLANTYASNDKWERAEEVKKLMSKKGMKKPSGYSWIQ 554
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 26 WNAVLSGFI-HNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
W +++ F+ H++ R I F M + + P TF+S+L A + + + +H L
Sbjct: 82 WTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAVFEGKQVHARL 141
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
++SGFL V + L+D+Y+KCG + A +F+ + D+D++ W+A+I Y K G
Sbjct: 142 VQSGFLGNKIVQTALLDMYAKCGYVCDARDVFD--GMVDRDVVAWTAMICGYAKAGRMVD 199
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A LF+ M + N T+T+++ ++ G + + L+ M + V +I
Sbjct: 200 ARLLFDNMGER----NSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWV----AMIA 251
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH-----ENVELGEVAAR 252
G+ G + +A + +P+ N + ALL AC + E +E+ E R
Sbjct: 252 GYGKLGNVSEARRIFDEIPVPLNPSTCAALL-ACYAQNGHAREAIEMYEKMRR 303
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 137/330 (41%), Gaps = 56/330 (16%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F + W A++ G+ +A LF M + ++ T
Sbjct: 159 MYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNM----GERNSFT 214
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI-LVDIYSKCGSLGYAHHIFNII 119
+ +++ YA D+K AM + Y + +G + EV + ++ Y K G++ A IF+ I
Sbjct: 215 WTTMVAGYANYGDMKAAMEL--YDVMNG---KEEVTWVAMIAGYGKLGNVSEARRIFDEI 269
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG---- 175
P+ + +A++A Y ++GH A+ ++ +M ++ +K V + AC+ +
Sbjct: 270 PVP-LNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRM 328
Query: 176 ------LVDEGLSLFQFMLKHHIIPLVDH---------------------YTCIIDLLGR 208
++EG ++ + +I + Y+ +I
Sbjct: 329 SNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAE 388
Query: 209 AGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE-----VAARWTFELEPE 260
G+ DA +L M + PN + +L AC + +E G + + E PE
Sbjct: 389 HGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPE 448
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNE 290
+Y + +L +GR +EK ++ E
Sbjct: 449 ---HYTCMVDL---LGRAGQLEKAYSLIKE 472
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
Query: 108 SLGYAHHIFNIIPLKDKDIIIWSAIIAAY-GKHGHGEMAVSLFNEMVQSGVKPNQVTFTS 166
+L YAH +F+ +P + IW+++I A+ H H +S F M Q G+ P+ TF+S
Sbjct: 62 NLYYAHKLFDTMP-NCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSS 120
Query: 167 VLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP 226
VL+AC V V EG + +++ + T ++D+ + G + DA ++ M +
Sbjct: 121 VLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGM-VDR 179
Query: 227 NHAVWGALLGACVSHENVELGEVAARWTFE-LEPENTGNYILLANLYAAVGRWRDVEKVR 285
+ W A++ + V AR F+ + N+ + + YA G + ++
Sbjct: 180 DVVAWTAMICGYAKAGRM----VDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELY 235
Query: 286 DMVN 289
D++N
Sbjct: 236 DVMN 239
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 187/307 (60%), Gaps = 8/307 (2%)
Query: 1 MYAKCNCGNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYA+C GNL+ +F +K W ++++G+ H+ +EA+ LF++M++ +++P+
Sbjct: 261 MYARC--GNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNR 318
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
AT ++L A A L L I Y +GF L+V + LV +YSKCG++ A +F
Sbjct: 319 ATLATVLSACADLGSLCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFER 378
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLV 177
+ ++KD+ +WS++I +YG HG G A+SLF +M + +KP+ + +TS+L ACSH GL+
Sbjct: 379 V--ENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIVYTSLLFACSHSGLI 436
Query: 178 DEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
++GL F+ M I P +HYTC++DLL R G+LD A + I MP LL
Sbjct: 437 EDGLKYFKSMQTDFGITPTKEHYTCLVDLLARVGQLDLALDTIEAMPTDVQAEALSPLLS 496
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
AC H N+ELGE+ A ++ P+++ +Y+ +ANLY +VG+W++ +R+M++ G+ K
Sbjct: 497 ACRIHGNIELGELVAAKLLDVSPKSSSSYVGVANLYNSVGKWKEANTMRNMIDGKGMVKE 556
Query: 297 PAQSLVE 303
S V+
Sbjct: 557 CGWSQVQ 563
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 53/340 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC+ + K+F + ++ WN+++S + H S+ +A+ L K+MLV +P ++T
Sbjct: 54 MYSKCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSST 113
Query: 61 FNSLLPAYA----ILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHI 115
F S+L Y+ L Q M++HC++I+ G + + + + + L+ +Y++ G + A +
Sbjct: 114 FVSILSGYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKV 173
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC---- 171
F+ + +K I+ W+ I+ Y K G AV LFNEM + + + F +++ C
Sbjct: 174 FDF--MDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLR 231
Query: 172 -------------------------------SHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
+ G + +F +++ ++ +T
Sbjct: 232 EQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLS----WT 287
Query: 201 CIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 257
+I + R +A +L R M IKPN A +L AC ++ +GE ++ FE
Sbjct: 288 SMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFEN 347
Query: 258 EPENTGN-YILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
E L ++Y+ G ++ K R++ V + L
Sbjct: 348 GFETDLQVQTSLVHMYSKCG---NINKAREVFERVENKDL 384
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+ + + K+F +K W ++ G++ + EA++LF +M +++ D
Sbjct: 160 MYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIV 219
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L+ L + A ++H +++ G + ++L+ +Y++CG+L A IF++I
Sbjct: 220 FVNLVSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIV 279
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K ++ W+++IA Y + A+ LF MV + +KPN+ T +VL AC+ +G + G
Sbjct: 280 --RKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIG 337
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ Q+ ++ + T ++ + + G ++ A + + K + +W +++ +
Sbjct: 338 EEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENK-DLTLWSSMINS 393
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 115/234 (49%), Gaps = 14/234 (5%)
Query: 54 VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
V + T+ L + A L + +H ++ R GF V + LVD+YSKC + A
Sbjct: 6 VHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESAR 65
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS- 172
+F+ +P ++ ++ W+++I+AY E A+SL EM+ G KP+ TF S+L S
Sbjct: 66 KVFDEMP--ERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSS 123
Query: 173 ---HVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
+ +G+S+ F++K ++ V ++ + + G++D+A + M K
Sbjct: 124 NLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEK-TI 182
Query: 229 AVWGALLGACVS-HENVELGEVAARWTFELEPENTG-NYILLANLYAAVGRWRD 280
W ++G V +VE A + E++ +N G ++I+ NL + + R+
Sbjct: 183 VSWTTIMGGYVKVGSSVE----AVKLFNEMQHQNIGLDFIVFVNLVSGCIQLRE 232
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 180/310 (58%), Gaps = 9/310 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKR--TAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQP 56
MYAKC ++ MF + K W ++ G+ A A+QLF +M D + P
Sbjct: 137 MYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVP 196
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYAHH 114
++ T + +L A A LA L+ IH Y++R + L VA+ L+D+YSK G + A
Sbjct: 197 NDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQV 256
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+F+ + ++ I W++++ YG HG E A +F+EM + + + +TF VL+ACSH
Sbjct: 257 VFD--SMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHS 314
Query: 175 GLVDEGLSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
G+VD G+ LF M K ++ P V+HY C+ DL GRAGRL +A LI M ++P VW A
Sbjct: 315 GMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIA 374
Query: 234 LLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
LL AC +H NVEL E AA+ EL+ +N G Y LL+N+YA RW+DV ++R ++ G+
Sbjct: 375 LLSACRTHSNVELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGI 434
Query: 294 RKLPAQSLVE 303
+K P S V+
Sbjct: 435 KKRPGWSWVQ 444
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 20/239 (8%)
Query: 14 MFMKTSKKR----TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
+F K ++R W++V+SG+ EA+ +F+QM +P+ T SLL A
Sbjct: 38 LFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCA 97
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLE-------VASI--LVDIYSKCGSLGYAHHIFNIIP 120
+ L HCY I+ F+ + E +A I L+D+Y+KC SL A +F+ I
Sbjct: 98 SVGALLHGKETHCYSIK--FILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEIC 155
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ--SGVKPNQVTFTSVLHACSHVGLVD 178
KD+D++ W+ +I Y ++G A+ LF+EM + + + PN T + VL AC+ + +
Sbjct: 156 PKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALR 215
Query: 179 EGLSLFQFMLKHHII--PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G + ++L+ I ++ C+ID+ ++G +D A + +M K N W +LL
Sbjct: 216 FGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLL 273
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 180/310 (58%), Gaps = 9/310 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKR--TAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQP 56
MYAKC ++ MF + K W ++ G+ A A+QLF +M D + P
Sbjct: 194 MYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVP 253
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYAHH 114
++ T + +L A A LA L+ IH Y++R + L VA+ L+D+YSK G + A
Sbjct: 254 NDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQV 313
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+F+ + ++ I W++++ YG HG E A +F+EM + + + +TF VL+ACSH
Sbjct: 314 VFD--SMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHS 371
Query: 175 GLVDEGLSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
G+VD G+ LF M K ++ P V+HY C+ DL GRAGRL +A LI M ++P VW A
Sbjct: 372 GMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIA 431
Query: 234 LLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
LL AC +H NVEL E AA+ EL+ +N G Y LL+N+YA RW+DV ++R ++ G+
Sbjct: 432 LLSACRTHSNVELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGI 491
Query: 294 RKLPAQSLVE 303
+K P S V+
Sbjct: 492 KKRPGWSWVQ 501
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 20/239 (8%)
Query: 14 MFMKTSKKR----TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
+F K ++R W++V+SG+ EA+ +F+QM +P+ T SLL A
Sbjct: 95 LFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCA 154
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLE-------VASI--LVDIYSKCGSLGYAHHIFNIIP 120
+ L HCY I+ F+ + E +A I L+D+Y+KC SL A +F+ I
Sbjct: 155 SVGALLHGKETHCYSIK--FILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEIC 212
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ--SGVKPNQVTFTSVLHACSHVGLVD 178
KD+D++ W+ +I Y ++G A+ LF+EM + + + PN T + VL AC+ + +
Sbjct: 213 PKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALR 272
Query: 179 EGLSLFQFMLKHHII--PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G + ++L+ I ++ C+ID+ ++G +D A + +M K N W +LL
Sbjct: 273 FGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLL 330
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 67 AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
Y IL D +NI L SGF V + LVD+Y+KCG + A ++ ++ KD+
Sbjct: 23 GYGILPDTVGVVNI---LPVSGFF----VGNALVDMYAKCGKMEDASKVYE--RMRFKDV 73
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ W+A++ Y ++G E A+SLF +M + ++ + VT++SV+ + G E + +F+
Sbjct: 74 VTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQ 133
Query: 187 MLKHHIIPLV 196
M P V
Sbjct: 134 MCGCSCRPNV 143
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 176/292 (60%), Gaps = 3/292 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILA 72
+F +K WNA++ G+ N + +A++LF +M DV+ + T S+LPA A L+
Sbjct: 273 LFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLS 332
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L +H ++ R+ + V + LVD+Y+KCG +G A +F + +KD W+A+
Sbjct: 333 ALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFE--EMTEKDTGSWNAL 390
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I YG +G + A+ +F M++ G +PNQ+T TSVL AC+H GLV+EG F+ M + I
Sbjct: 391 INGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMERFGI 450
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
+P ++HY C+IDLLGRAGRLD+A LI+ MP PN + + L AC E+V E +
Sbjct: 451 VPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERILK 510
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++E E G+Y++L NLYA RW DVE V++M+ + G K A S++EV
Sbjct: 511 VAVKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNKEVAWSVIEV 562
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 22/243 (9%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + K+F + S + W AV+ G+ EA +LF M+ DV A
Sbjct: 167 MYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDV----AA 222
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI-----LVDIYSKCGSLGYAHHI 115
FN ++ Y + + A ++ ++ V ++ +V YS+ G + A +
Sbjct: 223 FNVMIDGYVKMGRMDLARDL---------FDKMRVKNVISWTSMVHGYSEDGDVDEARFL 273
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHV 174
F+ +P +K+++ W+A+I Y ++G A+ LF EM + V+ N+VT SVL A + +
Sbjct: 274 FDCMP--EKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADL 331
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
+D G + F+ ++ + V ++D+ + G + A + M K + W AL
Sbjct: 332 SALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGS-WNAL 390
Query: 235 LGA 237
+
Sbjct: 391 ING 393
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 15/196 (7%)
Query: 55 QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
+P + TF +L ++ +Q IH ++++ F L V + LVD+Y K G +G+A
Sbjct: 120 RPSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARK 179
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+F+ + + + ++ W+A+I Y + G A LF+ MV V F ++ +
Sbjct: 180 VFDEMSV--RSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDV----AAFNVMIDGYVKM 233
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
G +D LF M ++I +T ++ G +D+A L MP K N W A+
Sbjct: 234 GRMDLARDLFDKMRVKNVIS----WTSMVHGYSEDGDVDEARFLFDCMPEK-NVLSWNAM 288
Query: 235 L-GACV---SHENVEL 246
+ G C SH+ ++L
Sbjct: 289 IRGYCQNGRSHDALKL 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F + ++K T WNA+++G+ N A+EA+++F ML E +P+ T
Sbjct: 362 MYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQIT 421
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A +++ + R G + ++E ++D+ + G L A + +P
Sbjct: 422 MTSVLSACNHCGLVEEGRRCFEAMERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMP 481
Query: 121 LKDKDIIIWSAIIA 134
+II+ S + A
Sbjct: 482 YDPNEIILTSFLFA 495
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 177/293 (60%), Gaps = 6/293 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + K WNA+++G++ L+++A++LF +M V PD T SLL A A L D
Sbjct: 227 LFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGD 286
Query: 74 LKQAMNIHCYL--IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
L+ +H + I G L L + + L+D+Y+KCG++ + +F + DKD+I W++
Sbjct: 287 LENGKKVHAKVMEISMGKLSTL-LGNALIDMYAKCGNIKESLDVF--WSITDKDVISWNS 343
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I HGHG+ ++SLF M ++ + PN++TF VL ACSH G +DEG F M +
Sbjct: 344 VIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEY 403
Query: 192 II-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
I P + H C++D+LGRAG L +A I +M I+PN +W LL AC H +VEL +VA
Sbjct: 404 KIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVA 463
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
F + +++G+Y+L++NLYA+ G W EKVR ++++ G+ K+ S VE
Sbjct: 464 NEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVE 516
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N ++++F + + T +N ++ G + AI L+ +M V+ D+ TF +L A
Sbjct: 59 NYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKAC 118
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
L + +H ++R GF V + L+ ++KCG L A +F+ D++
Sbjct: 119 TRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFD--DSCKGDVVA 176
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQ 154
WS++IA Y + G ++A LFNEM +
Sbjct: 177 WSSLIAGYARRGDLKVARKLFNEMPE 202
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC S +F + K WN+V+ G + +E++ LFK M + P+ T
Sbjct: 316 MYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEIT 375
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV----ASILVDIYSKCGSLGYAHHIF 116
F +L A + ++ + + Y Y++E +VD+ + G L A
Sbjct: 376 FVGVLVACSHAGEIDEG---YKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFI 432
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ + + + + IIW ++AA HG E+A
Sbjct: 433 DSMKI-EPNAIIWRTLLAACKVHGDVELA 460
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 187/307 (60%), Gaps = 6/307 (1%)
Query: 1 MYAKCNCG---NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
+Y C CG +L+ ++F +S + W++++ + + +A++LF +M E+ +P+
Sbjct: 315 IYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPN 374
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
T +++ A L+ K IH Y+++ G + + V + L+++Y+KCGSL + IF
Sbjct: 375 YVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFL 434
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+P +D + W+++I+AYG HG+GE A+ F EM + GVK + VTF +VL AC+H GLV
Sbjct: 435 EMP--SRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLV 492
Query: 178 DEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
EG LF+ + IP+ ++HY C+IDL GR+G+L+DA ++RTMP+KP+ +W +L+
Sbjct: 493 TEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVS 552
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
+C H +++ E + EP N +Y LL+ ++A GRW D+E+VR+ + LRK
Sbjct: 553 SCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKC 612
Query: 297 PAQSLVE 303
S +E
Sbjct: 613 YGFSRIE 619
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 7/259 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y +C ++ +F + K W AV+SG +N A+ +++M VE V P+ T
Sbjct: 216 FYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVT 275
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG-SLGYAHHIFNII 119
+LL A A +K IH Y R GF + L+ +Y +CG SL A IF
Sbjct: 276 LIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGS 335
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
L +D+++WS+II +Y + G + A+ LFN+M +PN VT +V+ AC+++
Sbjct: 336 SL--RDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKH 393
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G + ++LK I + +I++ + G LDD+ + MP + + W +++ A
Sbjct: 394 GGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSR-DSVTWNSMISAYG 452
Query: 240 SHENVELGEVAARWTFELE 258
H GE A + +E++
Sbjct: 453 LH---GYGEQALQHFYEMK 468
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 147/357 (41%), Gaps = 61/357 (17%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + ++F + T WN++++ ++ N L EA+Q+ K P
Sbjct: 110 MYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPEL 169
Query: 61 FNSLLPAYAILADL--KQAMNIHCYLIRSGFL---YRLEVASILVDIYSKCGSLGYAHHI 115
S++ DL + IH ++ G + + + +++ VD Y +CG A +
Sbjct: 170 LASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSV 229
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F+ + +K++ + W+A+I+ + ++A++ + EM GV PN+VT ++L AC+ G
Sbjct: 230 FDEMEVKNE--VSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPG 287
Query: 176 LVDEGLSLFQFMLK------HHIIPLVDHYTC--------------------------II 203
V G + + + H P + + C II
Sbjct: 288 FVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSII 347
Query: 204 DLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 260
R G D A +N +RT +PN+ A++ AC + + + G V + +
Sbjct: 348 GSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKF--- 404
Query: 261 NTGNYIL----LANLYAAVGRWRDVEKV------RD------MVNEVGLRKLPAQSL 301
G I L N+YA G D K+ RD M++ GL Q+L
Sbjct: 405 GIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQAL 461
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 119/285 (41%), Gaps = 21/285 (7%)
Query: 4 KCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF-- 61
+CNC + + F+ + +P + + + + L + +Q F Q+ ++ F
Sbjct: 11 QCNCISFITRRFLSSVVPTHSPSDHIKT-LVSMGLYHQTLQFFTQLHFSAHHFNSIPFVL 69
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S++ A + +HC +G V++ ++ +Y+K + A +F+ +P
Sbjct: 70 PSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMP- 128
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS-------HV 174
+D I W+++I AY ++G A+ + + G P S++ C +
Sbjct: 129 -HRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRI 187
Query: 175 GLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
G GL + ++ H + L T +D R G A ++ M +K N W A
Sbjct: 188 GRQIHGLVVVDGRIRIQHSVFLS---TAFVDFYFRCGDSLMARSVFDEMEVK-NEVSWTA 243
Query: 234 LLGACVSHENVELGEVAARWTFELEPENTG-NYILLANLYAAVGR 277
++ C ++++ ++ R E++ E N + L L AA R
Sbjct: 244 VISGCANNQDYDVALACYR---EMQVEGVSPNRVTLIALLAACAR 285
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 182/303 (60%), Gaps = 1/303 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + + K+F + K+ A WNA++SG S EAI LF +M E +P++ T
Sbjct: 130 YAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTV 189
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
L A + L LK+ +H Y++ + V + ++D+++KCG + A+ +F +
Sbjct: 190 LGALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSC 249
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ K +I W+ +I A+ +G G A+ L + M G P+ V++ L AC+H GLVDEG+
Sbjct: 250 R-KSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGV 308
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
LF M + V HY ++DLLGRAGRL +AY +I +MP+ P+ +W +LLGAC ++
Sbjct: 309 RLFDLMKVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTY 368
Query: 242 ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
NVE+ E+A++ E+ ++G+++LL+N+YAA RW+DV +VR+ + + +RK+P S
Sbjct: 369 GNVEMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFSY 428
Query: 302 VEV 304
EV
Sbjct: 429 TEV 431
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 117/232 (50%), Gaps = 4/232 (1%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNLS +F + T +NA+L G +S ++I ++ ML + D T + L
Sbjct: 33 GNLSLAGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDMLCCVQRVDALTCSFAL 92
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A +A +H ++R GF + + + L+D+Y+K G + YA +F+ + +D
Sbjct: 93 KGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFD--EMDKRD 150
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
I W+A+I+ + + A++LFN M + G +PN VT L ACS +G + EG + +
Sbjct: 151 IASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHR 210
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++L + V +ID+ + G +D AY++ +M + + W ++ A
Sbjct: 211 YVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMA 262
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 179/293 (61%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + K T W+A+++GF+ + A+ LF++M V V PD T S+L A A L
Sbjct: 183 KVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLG 242
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ + Y+ + +E+ + L+D+++KCG++ A +F + + I+ W+++
Sbjct: 243 ALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFR--QMDSRTIVSWTSV 300
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH-H 191
IA HG G AVSLF+EMV++G+ P+ V F VL ACSH GLVD+G F M ++
Sbjct: 301 IAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFS 360
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I+P V+HY C++DLL R G + +A+ ++ MP +PN +W ++ AC + ++LGE +
Sbjct: 361 IVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESIS 420
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ + EP + NY+LL+N+YA + +W KVR+M++ G++K+P +++EV
Sbjct: 421 KELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEV 473
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+AKC + + K+F + + W +V++G + +A+ LF +M+ + PD+
Sbjct: 272 MFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVA 331
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + + + + R+ + ++E +VD+ + G + A +
Sbjct: 332 FIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKM 391
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
P + + IIW II A G ++ S+ E+++S
Sbjct: 392 PF-EPNQIIWRTIITACHATGELKLGESISKELIKS 426
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 176/293 (60%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F K K W V+ GF+ EA++ F++M + V PD T +++ A A L
Sbjct: 178 KLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLG 237
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L + +H +++ F ++V + L+D+Y++CG + A +F+ + ++++ W++I
Sbjct: 238 ALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFD--GMSQRNLVSWNSI 295
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HH 191
I + +G + A+S F M + G++PN V++TS L ACSH GL+DEGL +F + + H
Sbjct: 296 IVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHR 355
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
P ++HY C++DL RAGRL +A+++I+ MP+ PN V G+LL AC + +VEL E
Sbjct: 356 NSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVM 415
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++ EL P NY+L +N+YAAVG+W KVR + E GL+K A S +E+
Sbjct: 416 KYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEI 468
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 75/364 (20%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + + K + +T W + +S N+ +A F QML +V+P++ T +LL A
Sbjct: 38 NQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSAC 97
Query: 69 A---ILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD- 123
A + +H + + GF + + V + L+D+Y+KCG L YA +F+ + +++
Sbjct: 98 AHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNL 157
Query: 124 ----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
K+++ W+ +I + K E A+ F EM +
Sbjct: 158 VSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLA 217
Query: 156 GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL--- 212
GV P+ VT +++ AC+++G + GL + + ++K V +ID+ R G +
Sbjct: 218 GVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELA 277
Query: 213 ----------------------------DDAYNLIRTMP---IKPNHAVWGALLGACVSH 241
D A + R+M ++PN + + L AC SH
Sbjct: 278 RQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTAC-SH 336
Query: 242 ENVELGEVAARWTFELEPENTG---NYILLANLYAAVGR----WRDVEKVRDMVNEVGLR 294
+ + + + N+ +Y L +LY+ GR W ++K+ M NEV L
Sbjct: 337 AGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLG 396
Query: 295 KLPA 298
L A
Sbjct: 397 SLLA 400
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+C C L+ ++F S++ WN+++ GF N LA +A+ F+ M E ++P+ +
Sbjct: 267 MYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVS 326
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ S L A + + + + I + R R+E LVD+YS+ G L A + +
Sbjct: 327 YTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKM 386
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ--SGVKPNQVTFTSVLHA 170
P+ ++++ S ++AA G E+A + V+ G N V F+++ A
Sbjct: 387 PMMPNEVVLGS-LLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAA 438
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 174/303 (57%), Gaps = 3/303 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC +L+ K+F K ++++SG+ N L E+ LF ML D D T
Sbjct: 581 MYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFT 640
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A ++L +H Y+ + G + V S L+ +YSKCGS+ F+
Sbjct: 641 ITSILGAASLLCQSDIGTQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFD--D 698
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ D+I W+++I +Y +HG G A++ + M GV+P+ VTF +L ACSH GLV+E
Sbjct: 699 VEKPDLIGWTSLILSYAQHGKGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEA 758
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
M++ + I P HY CI+D+LGR+GRL +A + I MP++PN +WG LL AC
Sbjct: 759 FFYLNSMIEDYKITPSHRHYACIVDILGRSGRLREAESFINNMPVEPNALIWGTLLAACK 818
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H + ELG++AA LEP + G Y+ +N+ A +W +V K+R +N+ G++K PA
Sbjct: 819 VHGDFELGKLAAEKVMGLEPSDVGAYVSFSNICADGEQWEEVTKIRSSLNKTGMKKEPAW 878
Query: 300 SLV 302
S+V
Sbjct: 879 SVV 881
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 127/241 (52%), Gaps = 3/241 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC C SY++F + K W +++SGF+ + +A++LFK+ML ++V PD+ T
Sbjct: 480 MYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHIT 539
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A L L+ IH R G V LV++YSKCGSL A +F+I+P
Sbjct: 540 LISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILP 599
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD S++++ Y ++G E + LF++M+++ + T TS+L A S + D G
Sbjct: 600 --HKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIG 657
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L ++ K + V + ++ + + G ++D + KP+ W +L+ +
Sbjct: 658 TQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVE-KPDLIGWTSLILSYAQ 716
Query: 241 H 241
H
Sbjct: 717 H 717
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 125/244 (51%), Gaps = 4/244 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + L++K+F ++ WN ++SG++ NS+ +++++F +M + +PD +
Sbjct: 79 LYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCRMHLFGFEPDEFS 138
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ S+L A L + + ++++GFL V + +VD++ K + A FN
Sbjct: 139 YGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEALRFFN--D 196
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ W+AII+ K+G ++A++LF+EM ++ + PN TF S+L AC + + G
Sbjct: 197 ASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACCALKEMQIG 256
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +K + T I+DL + G + +AY M ++ N W A++ V
Sbjct: 257 KGVHGLAIKCGATDVFVE-TAIVDLYAKFGCMSEAYRQFSQMQVQ-NVVSWTAIISGFVQ 314
Query: 241 HENV 244
++
Sbjct: 315 QDDT 318
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 122/244 (50%), Gaps = 5/244 (2%)
Query: 1 MYAKCNCG-NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
M+ K NC + + + F S A WNA++S + N + A+ LF +M + P++
Sbjct: 180 MFCK-NCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSY 238
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF S+L A L +++ +H I+ G + V + +VD+Y+K G + A+ F+
Sbjct: 239 TFPSILTACCALKEMQIGKGVHGLAIKCG-ATDVFVETAIVDLYAKFGCMSEAYRQFS-- 295
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ ++++ W+AII+ + + A+ LF +M Q G + N T TSVL AC+ L++E
Sbjct: 296 QMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEE 355
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ +LK +I V ++++ + G + + M + +W ++L +
Sbjct: 356 AKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFA 415
Query: 240 SHEN 243
+ N
Sbjct: 416 QNRN 419
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 20/237 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSK-KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MYAK LS F + K W ++LS F N + A++LF ML E V+PD
Sbjct: 381 MYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEY 440
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
SLL + L+ Q +H Y++++G + V L +YSKCG L ++ +F
Sbjct: 441 CIGSLLSIMSSLSLGSQ---VHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQA 497
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+KD + W+++I+ + +HG+ + A+ LF EM+ V P+ +T S+L AC+ + L+
Sbjct: 498 IVKDN--VSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRT 555
Query: 180 GL----SLFQFMLKHHII---PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA 229
G S F+ L + + LV+ Y+ + G L A + +P K A
Sbjct: 556 GREIHGSTFRLGLGTNTVVGGALVNMYS-------KCGSLSLARKVFDILPHKDAFA 605
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 181/303 (59%), Gaps = 3/303 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y C + K+F +K W+A++SG+ + EA+ LF++M + ++PD
Sbjct: 384 YLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAI 443
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S++ A +A L IH Y+ ++ F + + + LVD+Y KCG + A +F +
Sbjct: 444 VSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVF--YAM 501
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++K + W+A+I +G E ++++F +M ++ PN++TF VL AC H+GLVDEG
Sbjct: 502 EEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGR 561
Query: 182 SLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M + H I P V HY C++DLLGRAG L +A LI +MP+ P+ A WGALLGAC
Sbjct: 562 RYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWGALLGACRK 621
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N E+GE R +L+P++ G ++LL+N+YA+ G W DV ++R ++ + G+ K+P S
Sbjct: 622 HHNNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGDVLEIRGIMAQHGVVKMPGCS 681
Query: 301 LVE 303
++E
Sbjct: 682 MIE 684
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 30/264 (11%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
++ K C + +F + K W+A++S + N + EA+ LF M V D
Sbjct: 251 LFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVV 310
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S + A L+ ++ ++H + G + + + L+ +YS CG + A IF+
Sbjct: 311 VVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGV 370
Query: 121 LKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
L D KD++ WSA+I+ Y +HG AV+LF E
Sbjct: 371 LLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQE 430
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
M G++P++ SV+ AC+H+ +D G + ++ K+ V T ++D+ + G
Sbjct: 431 MQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGC 490
Query: 212 LDDAYNLIRTMPIKPNHAVWGALL 235
+++A + M K + W AL+
Sbjct: 491 VENALEVFYAMEEK-GVSTWNALI 513
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 63/270 (23%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFI--HNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
S K+F T WN ++ + HNS ++A+ +K L ++ PD+ T+ LL +
Sbjct: 97 SLKIFNHLHNPNTFIWNTIMRSHLELHNS-PQQALNFYKLFLFQNTSPDHYTYPILLRSC 155
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL------------------- 109
+ IH ++++ GF + V + L+++Y+ CG++
Sbjct: 156 TARVSEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWN 215
Query: 110 ----GY--------AHHIFNIIPLKD-----------------------------KDIII 128
GY A +++ +P+++ KD++
Sbjct: 216 TLLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVS 275
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
WSA+I+ Y ++G E A+ LF +M +GV ++V S + AC+ + V G S+
Sbjct: 276 WSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAA 335
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
K I V +I L G + DA +
Sbjct: 336 KIGIQDYVSLQNALIHLYSNCGEILDAQKI 365
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C + ++F +K + WNA++ G N L +++ +F M P+ T
Sbjct: 484 MYMKCGCVENALEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEIT 543
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 116
F +L A + + + + + +++E +VD+ + G L A +
Sbjct: 544 FMGVLGACRHMGLVDEGRRYFSSMTQE---HKIEPNVKHYGCMVDLLGRAGLLKEAEELI 600
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+P+ D+ W A++ A KH + EM L +++Q ++P+ F +L
Sbjct: 601 ESMPMA-PDVATWGALLGACRKHHNNEMGERLGRKLIQ--LQPDHDGFHVLL 649
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 192/295 (65%), Gaps = 10/295 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + K+F K + + WN++L+G++ + L EAI +F+QM+++ +PD +
Sbjct: 258 MYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFS 317
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++L + ++ L + IH ++IR G + L +A+ L+ YSK G L A IFN++P
Sbjct: 318 ISAILTS---VSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMP 374
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D++ W++II+++ KH A+S F +M ++G P+++TF S+L AC+H+GLV++G
Sbjct: 375 --ERDVVSWNSIISSHCKHPE---AISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDG 429
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP-NHAVWGALLGAC 238
LF M K+ I P+++HY C+++L GRAG ++ AY++I M + +WGALL AC
Sbjct: 430 ERLFALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLYAC 489
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
+ H NV +GE++A FELEP+N N++LL +Y GR D+E++R M+ + GL
Sbjct: 490 LLHGNVTIGEISANKLFELEPDNEHNFVLLMKIYEKAGRLEDMERIRMMMVDRGL 544
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 16/265 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKR--TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
+YA + ++ +F + +K+ PWN+++SG+ L +AI L+ QM+ E V+PD
Sbjct: 155 LYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDI 214
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF +L + + +H +++R GF V + LVD+YSKCG + A IFN
Sbjct: 215 FTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNK 274
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ +D + W++++ Y +HG A+++F +MV G KP+ + +++L + S +D
Sbjct: 275 MHFRDS--VSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVSS---LD 329
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+ + ++++ + + +I + GRLD A ++ MP + + W +++ +
Sbjct: 330 VGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPER-DVVSWNSIISSH 388
Query: 239 VSHENV--------ELGEVAARWTF 255
H E GEV + TF
Sbjct: 389 CKHPEAISYFEKMEEAGEVPDKITF 413
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Query: 50 LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGS 108
L + ++ D + SLL + + +H LI L+R + ++S LV +Y+ G
Sbjct: 103 LEKGIKIDPEIYASLLETCYRFGAIHHGIWLH-RLIPPALLHRNVGISSKLVRLYASFGY 161
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+ AH +F+ + +D W+++I+ Y + G + A++L+ +MV+ GV+P+ TF VL
Sbjct: 162 MDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVL 221
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
C +GLV G + + +++ ++D+ + G + A + M + +
Sbjct: 222 KVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFR-DS 280
Query: 229 AVWGALLGACVSH 241
W ++L V H
Sbjct: 281 VSWNSMLTGYVRH 293
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 175/303 (57%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC ++ K+F ++ W++ + G++ REA+ +F++M + + T
Sbjct: 190 YAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S+L A A L L++ +H Y+I + + + + LVD+Y+KCG++ A +F I
Sbjct: 250 VSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISK 309
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
D+ IW+A+I HG E ++ LF EM +G++ +++T+ +L AC+H GLV E
Sbjct: 310 SQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAW 369
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ F+ ++K + P +HY C++D+L RAG+L AY I +PI+P ++ GA+ C++H
Sbjct: 370 NFFESLVKRGMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINH 429
Query: 242 ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
N +L E R EL+P N G YI L+N+YA V RW D + +R+ + G++K P S
Sbjct: 430 RNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSF 489
Query: 302 VEV 304
VE+
Sbjct: 490 VEI 492
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 137/275 (49%), Gaps = 32/275 (11%)
Query: 3 AKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
A N G++ SY++F + S WN ++ G+ ++ ++ +F +ML V PD T
Sbjct: 57 ALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLT 116
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF---- 116
+ L+ A A L+ K +++H +I++G + + L+ +Y+ CG++ +AH +F
Sbjct: 117 YPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQ 176
Query: 117 --NII-----------------------PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
N++ ++++D+ WS+ I Y K G A+++F +
Sbjct: 177 GKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEK 236
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
M G K N+VT SVL AC+H+G + +G + Q+++ + + + T ++D+ + G
Sbjct: 237 MRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGA 296
Query: 212 LDDAYNLIRTMPIKPNHA-VWGALLGACVSHENVE 245
+++A + R + +W A++G +H VE
Sbjct: 297 IEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVE 331
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 180/298 (60%), Gaps = 2/298 (0%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPA 67
N + ++F +K W A+++G++ + L+ EA++LF +M D ++P TF ++L A
Sbjct: 280 NRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGA 339
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
+ LA L + IH + ++ F V S L+++YSKCG A +F+ D+I
Sbjct: 340 CSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLI 399
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+ +IAAY HG+G A++LFN+M + G + N VT+ +L ACSH GL DEG F +
Sbjct: 400 AWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDEL 459
Query: 188 LKHHIIPLV-DHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
LK+ I + DHYTC+IDL GRAGRLD+A N+I + + + ++WGALL C H N ++
Sbjct: 460 LKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADI 519
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
G++ A ++EPEN Y+L +N+YA+VG + VR + + GL+K P S ++V
Sbjct: 520 GKLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDV 577
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 49/229 (21%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + K+F + SK+ + W ++SG+I L EA +LF +PD
Sbjct: 62 NEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFD-------RPDAQK-------- 106
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ V + +V Y K + A +FN +P+ ++++
Sbjct: 107 -----------------------SVIVWTAMVSGYIKMNRIEEAERLFNEMPV--RNVVS 141
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+ +I Y ++G + A+ LF M + V V++ +V+ A +H G +D+ LF M
Sbjct: 142 WNTMIDGYARNGRTQEALDLFGRMPERNV----VSWNTVMTALAHCGRIDDAERLFNEMR 197
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ ++ +T ++ L + GR+D A + MPI+ N W A++
Sbjct: 198 ERDVVS----WTTMVAGLSKNGRVDAAREVFDKMPIR-NVVSWNAMIAG 241
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 130/293 (44%), Gaps = 29/293 (9%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K N + ++F + + WN ++ G+ N +EA+ LF +M +V ++
Sbjct: 118 YIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNV----VSW 173
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
N+++ A A + A + + + + +V SK G + A +F+ +P+
Sbjct: 174 NTVMTALAHCGRIDDAERLFNEMRERDVV----SWTTMVAGLSKNGRVDAAREVFDKMPI 229
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++++ W+A+IA Y ++G + A+ LF M + + T + G ++
Sbjct: 230 --RNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQN----GDLNRAE 283
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP----IKPNHAVWGALLGA 237
LF M + ++I +T ++ + G ++A L M +KP + +LGA
Sbjct: 284 QLFHAMPQKNVIT----WTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGA 339
Query: 238 CVS----HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRD 286
C E ++ ++ ++ F+ E+T L N+Y+ G + +K+ D
Sbjct: 340 CSDLAGLPEGQQIHQMISKTVFQ---ESTYVVSALINMYSKCGDFHVAKKMFD 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 97 SILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
+ ++ Y KCG + A +F+ P K +I+W+A+++ Y K E A LFNEM
Sbjct: 80 TTMISGYIKCGLINEARKLFDR-PDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRN 138
Query: 157 VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAY 216
V V++ +++ + G E L LF M + +++ + ++ L GR+DDA
Sbjct: 139 V----VSWNTMIDGYARNGRTQEALDLFGRMPERNVVS----WNTVMTALAHCGRIDDAE 190
Query: 217 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP-ENTGNYILLANLYAAV 275
L M + + W ++ + V+ AAR F+ P N ++ + YA
Sbjct: 191 RLFNEMR-ERDVVSWTTMVAGLSKNGRVD----AAREVFDKMPIRNVVSWNAMIAGYAQN 245
Query: 276 GRWRDVEKVRDMVNEVGLRKLPA 298
GR+ + K+ + + E R +P+
Sbjct: 246 GRFDEALKLFERMPE---RDMPS 265
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + K F + W ++++G++ N + L+ +M +E V P+ T
Sbjct: 364 MYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELT 423
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + LA L Q +H +I+ GF + + S L +Y+KCGSL + IF +P
Sbjct: 424 MASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP 483
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D+I W+A+I+ ++GHG A+ LF +M+ G+KP+ VTF ++L ACSH+GLVD G
Sbjct: 484 --SRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRG 541
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F+ M + +I P+V+HY C++D+L RAG+L++A I + + +W LLGAC
Sbjct: 542 WEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACK 601
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H N ELG A EL + Y+LL+++Y A+G +VE+VR ++ G+ K P
Sbjct: 602 NHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGC 661
Query: 300 SLVEV 304
S +E+
Sbjct: 662 SWIEL 666
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 3/237 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + + F + K + W+A+++G+ + +A++LF +M V P T
Sbjct: 263 MYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFT 322
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ A + L + + +H + + GF +L V S +VD+Y+KCGSL A F +
Sbjct: 323 LVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECV- 381
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D+++W++II Y ++G E ++L+ +M V PN++T SVL ACS + +D+G
Sbjct: 382 -QQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQG 440
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ ++K+ V + + + + G LDD Y + MP + + W A++
Sbjct: 441 KQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR-DVISWNAMISG 496
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + K+F + ++ T W ++SG+ + +A +A+++F+ M E+ +
Sbjct: 162 MYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFA 221
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + +H I++G L + VA+ LV +Y+KCGSL A F
Sbjct: 222 LTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFS- 280
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
DK+ I WSA++ Y + G + A+ LFN+M SGV P++ T V++ACS + V EG
Sbjct: 281 -GDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEG 339
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ F K + + ++D+ + G L DA + +P+ +W +++ V
Sbjct: 340 KQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ-QPDVVLWTSIITGYVQ 398
Query: 241 HENVELG 247
+ + E G
Sbjct: 399 NGDYEGG 405
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 115/243 (47%), Gaps = 13/243 (5%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLARE---AIQLFKQML-VEDV 54
+YAK N + + +F + + K WN++++ F N + AI LF++M+ +V
Sbjct: 55 LYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNV 114
Query: 55 QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
P+ T + A + L+D+ H +++G + V S L+++Y K G + A
Sbjct: 115 IPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARK 174
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+F+ +P +++ + W+ +I+ Y + AV +F M + N+ TSVL A +
Sbjct: 175 LFDRMP--ERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSD 232
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK--PNHAVWG 232
V G + +K+ ++ +V ++ + + G LDDA +RT N W
Sbjct: 233 VFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDA---VRTFEFSGDKNSITWS 289
Query: 233 ALL 235
A++
Sbjct: 290 AMV 292
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
+ +H ++++G + + V + +++Y+K L +A +F+ I DKD + W+++I A
Sbjct: 29 KGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINA 88
Query: 136 YGKH---GHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+ ++ A+SLF M+++ V PN T V A S++ V G +K
Sbjct: 89 FSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTG 148
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
V + ++++ + G + DA L MP + N W ++ S +
Sbjct: 149 CSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP-ERNTVSWATMISGYASSD 198
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 179/306 (58%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F + + W V++GF+ ++A+ F++ML+++V P+ T
Sbjct: 252 MYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFT 311
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A + L Q +H Y+ + + + LVD+Y+KCG + A +F
Sbjct: 312 LTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFE--N 369
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ K++ W+A+I HG A+++F+ M++SG++PN VTF VL ACSH G VDEG
Sbjct: 370 LQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEG 429
Query: 181 LSLFQFMLKH--HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
LF+ M++H H+ P ++HY C++DLLGRAG L+DA +I MP+KP+ V GALLGAC
Sbjct: 430 KKLFE-MMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLGALLGAC 488
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
VSH++ +GE L+ + Y LLANLY+ W V +VR ++ + K P
Sbjct: 489 VSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVEKTPG 548
Query: 299 QSLVEV 304
S +EV
Sbjct: 549 YSWIEV 554
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 145/312 (46%), Gaps = 41/312 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F ++ ++ W A+++GF+ N + EA++ F +M ++ V D T S+L A A++
Sbjct: 162 KVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVG 221
Query: 73 DLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
D +H + + +G + V LVD+Y KCG A +F+ +P +D++ W+
Sbjct: 222 DYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPY--RDVVAWTV 279
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
++A + + + A+S F M+ V PN+ T TSVL AC+HVG +D+G + ++M +
Sbjct: 280 VVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHND 339
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK-------------------------- 225
T ++D+ + G +D A + + +K
Sbjct: 340 CNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFS 399
Query: 226 --------PNHAVWGALLGACVSHENVELGEV---AARWTFELEPENTGNYILLANLYAA 274
PN + +LGAC V+ G+ R T+ L+P N +Y + +L
Sbjct: 400 RMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKP-NMEHYGCMVDLLGR 458
Query: 275 VGRWRDVEKVRD 286
G D +++ D
Sbjct: 459 AGCLEDAKQIID 470
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 179/306 (58%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F + + W V++GF+ ++A+ F++ML+++V P+ T
Sbjct: 252 MYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFT 311
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A + L Q +H Y+ + + + LVD+Y+KCG + A +F
Sbjct: 312 LTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFE--N 369
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ K++ W+A+I HG A+++F+ M++SG++PN VTF VL ACSH G VDEG
Sbjct: 370 LQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEG 429
Query: 181 LSLFQFMLKH--HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
LF+ M++H H+ P ++HY C++DLLGRAG L+DA +I MP+KP+ V GALLGAC
Sbjct: 430 KKLFE-MMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLGALLGAC 488
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
VSH++ +GE L+ + Y LLANLY+ W V +VR ++ + K P
Sbjct: 489 VSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVEKTPG 548
Query: 299 QSLVEV 304
S +EV
Sbjct: 549 YSWIEV 554
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 145/312 (46%), Gaps = 41/312 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F ++ ++ W A+++GF+ N + EA++ F +M ++ V D T S+L A A++
Sbjct: 162 KVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVG 221
Query: 73 DLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
D +H + + +G + V LVD+Y KCG A +F+ +P +D++ W+
Sbjct: 222 DYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPY--RDVVAWTV 279
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
++A + + + A+S F M+ V PN+ T TSVL AC+HVG +D+G + ++M +
Sbjct: 280 VVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHND 339
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK-------------------------- 225
T ++D+ + G +D A + + +K
Sbjct: 340 CNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFS 399
Query: 226 --------PNHAVWGALLGACVSHENVELGEV---AARWTFELEPENTGNYILLANLYAA 274
PN + +LGAC V+ G+ R T+ L+P N +Y + +L
Sbjct: 400 RMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKP-NMEHYGCMVDLLGR 458
Query: 275 VGRWRDVEKVRD 286
G D +++ D
Sbjct: 459 AGCLEDAKQIID 470
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 168/279 (60%), Gaps = 3/279 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WNA++SGF N RE +F++MLV + P+ T +LLPA + +K +H ++
Sbjct: 255 WNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFIC 314
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R GF + +AS L+D+YSKCGSL A ++F+ I K+ + W+A+I +GK G + A
Sbjct: 315 RKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKN--VASWNAMIDCFGKCGMVDSA 372
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLV-DHYTCIID 204
+ LF +M + G++PN+VTF +L ACSH G V++GL +F M + + + + +HY CI+D
Sbjct: 373 LELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVD 432
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
LL R+G++ +AY I+ MPI+ ++ GA L C H +L + A ++ +G+
Sbjct: 433 LLCRSGKIVEAYEFIKAMPIQVTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLNGSGS 492
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
++ L+N+YAA G W + VR ++ E + K P S +E
Sbjct: 493 FVTLSNIYAAEGDWEEAGNVRKVMKERNVNKWPGSSWLE 531
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 6/293 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C + +F K +N ++ G ++N A+ F+ M + + T
Sbjct: 59 MYSSCTDLKSATLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFT 118
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++ L D+K+ +H + G + + + + L+D+Y KCGS+ YA +F+
Sbjct: 119 FGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFD--G 176
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ ++D+ W+++I + G E A+ LF M G +PN T+ +++ + +G +
Sbjct: 177 MSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKA 236
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGA 237
+ M K IP V + +I + + + + + R M I PN ALL A
Sbjct: 237 FGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPA 296
Query: 238 CVSHENVELG-EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVN 289
C S +V+ G EV + N L ++Y+ G +D V D +
Sbjct: 297 CGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQ 349
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + +F K K A WNA++ F + A++LF +M E +QP+ T
Sbjct: 331 MYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVT 390
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 116
F +L A + +++ + I + Y +E+ + +VD+ + G + A+
Sbjct: 391 FACILSACSHSGSVEKGLEIFTLMKEC---YGVEICKEHYACIVDLLCRSGKIVEAYEFI 447
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+P++ + I A + HG ++A + E+++
Sbjct: 448 KAMPIQVTESIA-GAFLNGCKIHGRKDLAKKMAEEIMR 484
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 171/292 (58%), Gaps = 17/292 (5%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + + A W+ ++ GF + +A FK++L + +P + +L A A
Sbjct: 208 VFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGA 267
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+ +H ++ ++GFL + V + L+D YSKCG++ A +FNI
Sbjct: 268 FEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFNI--------------- 312
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-I 192
+ HG + A+ +F+EM +SGV+P+ VTF S+L+ACSH GLV++G +LF M + I
Sbjct: 313 -SLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGI 371
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P ++HY C++DL GRA RL AY IR MPI PN +W LLGAC H N+EL E+
Sbjct: 372 EPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKA 431
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
E++P N+G+++LL+N+YA G+W+DV +R + E ++K+P S++E+
Sbjct: 432 RLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEI 483
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 133/341 (39%), Gaps = 63/341 (18%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPA 67
N S ++F T +N ++ H+S ++Q F Q+L + PD+ +F L
Sbjct: 62 NYSLRLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKG 121
Query: 68 YAILA-DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--------- 117
A +Q + +H + R GF + V + L+ +Y++CG YA +F+
Sbjct: 122 IANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVA 181
Query: 118 ---------------------------IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFN 150
+K +D WS +I + K G A F
Sbjct: 182 WNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFK 241
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA- 209
E+++ +P++V+ T VL AC+ G + G L FM K + +V +ID +
Sbjct: 242 ELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCG 301
Query: 210 ----------------GRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEV- 249
GR D+A + M ++P+ + +LL AC VE G
Sbjct: 302 NVDMAKLVFNISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCAL 361
Query: 250 --AARWTFELEPENTGNYILLANLYAAVGRWRDV-EKVRDM 287
R + +EP +Y + +LY R + E +R M
Sbjct: 362 FSKMRNFYGIEPA-IEHYGCMVDLYGRAARLQKAYEFIRQM 401
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + +Y +F K K WN ++ GF N ++ EA+ LF +M ++ + T
Sbjct: 449 MYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVT 508
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S + A + L L + IH +I +G L + + LVD+Y+KCG L A +F+ I
Sbjct: 509 FLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIV 568
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K ++ WS +IAA+G HG A SLF++MV S +KPN+VTF ++L AC H G V EG
Sbjct: 569 --EKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEG 626
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M ++ I+P V+H+ I+DLL RAG ++ AY +I+++ ++WGALL C
Sbjct: 627 KFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCR 686
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ +++ E A + ++TG Y LL+N+YA G W + KVR + +GL+K+P
Sbjct: 687 IYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGY 746
Query: 300 SLVEV 304
S VE+
Sbjct: 747 STVEI 751
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 124/224 (55%), Gaps = 4/224 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + + W++++S ++ N + RE +++F+ M+ E ++PD+ S+ A +
Sbjct: 158 KVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIG 217
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ A ++H Y++R G + +++ L+ +YS+CG L A +F I D+ W+++
Sbjct: 218 CLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECID--DRSTSCWTSM 275
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I+AY ++ E A+ +F +M S V+PN VT SVL++C+ +G + EG S+ F+L++ +
Sbjct: 276 ISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAM 335
Query: 193 -IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ +D +ID ++ L+ ++ N W L+
Sbjct: 336 GVTGLDLGPALIDFYSACWKMSSCEKLLHSIG-NENIVSWNTLI 378
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C + ++F + T+ W +++S + N EA+ +F +M +V+P++ T
Sbjct: 247 MYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVT 306
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+L + A L LK+ ++HC+++R+ + L++ L+D YS C + + + I
Sbjct: 307 MISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSI 366
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPN 160
+++I+ W+ +I+ Y + G + A++ F MV G+ P+
Sbjct: 367 G--NENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPD 405
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 178/303 (58%), Gaps = 4/303 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K N + +F S++ W A++SG++ N +A++LF M + +P++ TF
Sbjct: 213 YVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTF 272
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S+L A A + L + +H +I+SG + + LVD+Y+KCG + A +F I
Sbjct: 273 SSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESI-- 330
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+DK+++ W+AII Y HG A+ F+ M G P++VTF +VL AC H GLV+EG
Sbjct: 331 RDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT-PDEVTFVNVLSACVHAGLVEEGE 389
Query: 182 SLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F ML K+ I ++HY+C++DL GRAGR D+A NLI+ MP +P+ +WGALL AC
Sbjct: 390 KHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGL 449
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N+ELGE AA LE + +Y +L+ + G W V ++RD + E G++K A S
Sbjct: 450 HSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQTAIS 509
Query: 301 LVE 303
VE
Sbjct: 510 WVE 512
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + ++ +F K WNA++ G+ + LA A++ F +M V PD T
Sbjct: 313 MYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT-PDEVT 371
Query: 61 FNSLLPAYAILADLKQAMNIHC--YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F ++L A + A L + H L + G +E S +VD+Y + G A ++
Sbjct: 372 FVNVLSA-CVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKN 430
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P + D+++W A++AA G H + E+
Sbjct: 431 MPF-EPDVVLWGALLAACGLHSNLELG 456
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 118/290 (40%), Gaps = 61/290 (21%)
Query: 12 YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPA---- 67
+ +F K K WN +LSGF + + F QM V P++ T ++LL A
Sbjct: 60 HDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVIST 119
Query: 68 ---------YAILADLKQAMNIH--CYLIRSGFLYRLEVA----------------SILV 100
+A+ L +N+ LIR+ + E A + LV
Sbjct: 120 ELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALV 179
Query: 101 DIYSKCGSLGYAHHIFNIIP-----------------------------LKDKDIIIWSA 131
Y + G A F+ +P + +++++ W+A
Sbjct: 180 SSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTA 239
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I+ Y ++ A+ LF M ++ +PN TF+SVL AC+ + GL L ++K
Sbjct: 240 MISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSG 299
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
I V T ++D+ + G +D A+ + ++ K N W A++G SH
Sbjct: 300 IANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDK-NLVSWNAIIGGYASH 348
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 173/284 (60%), Gaps = 8/284 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++ G+ N E + LF++MLVE V+P+ T +L + + L+ +H Y I
Sbjct: 219 WNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSY-I 277
Query: 86 RSG----FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGH 141
++G + V + LVD+Y KCGSL A +F+ I KD++ W+++I Y +G
Sbjct: 278 KNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKI--DGKDVVAWNSMIMGYAVNGL 335
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYT 200
E A+ LF+EM GV+P+ VTF ++L AC H GLV +G +F M ++ + P V+H+
Sbjct: 336 SEEALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVEHFG 395
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 260
C+++LLGRAGRL +AY+L+R+M I P+ +WG LL AC H N+ LGE A + +
Sbjct: 396 CMVNLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLHNNISLGEEIAEFLLSNDLA 455
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++G Y+LL+N+YAA G W KVR ++ + G+ K P S++EV
Sbjct: 456 SSGTYVLLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCSIIEV 499
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 135/315 (42%), Gaps = 42/315 (13%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N S +F +T + W +++ + L +A+ + QML +QP+ TF+SLL
Sbjct: 73 NYSVTLFNRTRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSSLLNGS 132
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK------ 122
I + +IHC++I+ G VA+ LVD Y++ G A +F+ +P K
Sbjct: 133 TI----QPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFT 188
Query: 123 ------------------------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
++D+++W+ +I Y ++G + LF M+ VK
Sbjct: 189 TMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVK 248
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLK---HHIIPLVDHYTCIIDLLGRAGRLDDA 215
PN +T VL +C VG ++ G + ++ + V T ++D+ + G L+DA
Sbjct: 249 PNVITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDA 308
Query: 216 YNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG-NYILLANLYAA 274
+ + K A ++G V+ L E A + E+ E +Y+ L A
Sbjct: 309 RKVFDKIDGKDVVAWNSMIMGYAVN----GLSEEALKLFHEMHGEGVRPSYVTFIALLTA 364
Query: 275 VGRWRDVEKVRDMVN 289
G V K +M N
Sbjct: 365 CGHSGLVTKGWEMFN 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F K K WN+++ G+ N L+ EA++LF +M E V+P T
Sbjct: 298 MYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRPSYVT 357
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNI 118
F +LL A + + + L+++ + R+E +V++ + G L A+ +
Sbjct: 358 FIALLTACGHSGLVTKGWEMF-NLMKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRS 416
Query: 119 IPLKDKDIIIWSAIIAAYGKHGH---GEMAVS--LFNEMVQSGV 157
+ + D D +IW ++ A H + GE L N++ SG
Sbjct: 417 MKI-DPDPVIWGTLLWACRLHNNISLGEEIAEFLLSNDLASSGT 459
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 170/293 (58%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+F +K WN+++SG + + +A++LF +M + +PD T SLL L
Sbjct: 409 SLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLG 468
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+L+ +H Y++R+ + + L+D+YSKCG L YA +F I KD + W+AI
Sbjct: 469 NLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNI--KDPCLATWNAI 526
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I+ Y +G A ++++ + G+KP+++TF VL AC+H GLV GL F M K +
Sbjct: 527 ISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYG 586
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
++P + HY CI+ LLG+ G +A I M I+P+ AVWGALL AC V+LGE A
Sbjct: 587 LMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLA 646
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ F L +N G Y+L++NLYA VGRW DV +VR+M+ + G S+++V
Sbjct: 647 KKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCSGVSVIDV 699
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 138/324 (42%), Gaps = 53/324 (16%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC+ S +F + +K WN ++ + N L +AI FK+ML E P + T
Sbjct: 201 MYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVT 260
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L+ A A N+HCY+++ GF V + LV +Y+K G A ++ P
Sbjct: 261 IMNLVSANAF------PENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYP 314
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH----------A 170
KD+I +AII++Y + G E AV F + +Q +KP+ V VLH
Sbjct: 315 --TKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIG 372
Query: 171 CSHVGL-------------------------VDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
C+ G ++ LSLF M + +I + +I
Sbjct: 373 CTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLIT----WNSMISG 428
Query: 206 LGRAGRLDDAYNLIRTMPI---KPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 262
+AG+ DA L M + KP+ +LL C N+ +GE +
Sbjct: 429 CVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILR-NNVRV 487
Query: 263 GNYI--LLANLYAAVGRWRDVEKV 284
++I L ++Y+ GR EKV
Sbjct: 488 EDFIGTALIDMYSKCGRLDYAEKV 511
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + + MF + S + WN ++ G+ N AIQLF ML E+ +P+ T
Sbjct: 100 LYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTT 159
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SLLP+ + Q +IH + I++GF + + L+ +Y+KC L + +F+
Sbjct: 160 IVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFD--E 217
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
+ +K ++ W+ +I YG++G + A+ F EM++ G P+ VT +++ A
Sbjct: 218 MDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSA 267
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 22 RTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLK------ 75
R+ P ++ N+ + A+ +F+Q+L +V P+ TF+ L+ AY
Sbjct: 13 RSRPNLSLFHSLFQNATS-PALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTA 71
Query: 76 --QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
QA I ++ G + V + L+D+Y K G +A ++F+ + +D++ W+ +I
Sbjct: 72 ALQARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFD--QMSYRDVVSWNVLI 129
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
Y ++G+ A+ LF +M++ KPNQ T S+L +C L+ +G S+ F +K
Sbjct: 130 CGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIK 185
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 181/305 (59%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + ++F + S + WN ++ GF ++ E ++L K+ML E PD T
Sbjct: 314 MYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELT 373
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S++ + + + + + +H + ++ L VA+ L+ YSKCGS+ A F +
Sbjct: 374 ISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELT- 432
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D++ W+++I AY HG E + +F +M+ G+KP+++ F VL AC+H GLV +G
Sbjct: 433 -SQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKG 491
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F+ M + I+P +HYTC++DLLGR G +++A+ ++R+MPI+ + GA +G+C
Sbjct: 492 LHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCK 551
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N+EL ++AA F +EPE + NY +++N++A+ W DVE++R + + K+P
Sbjct: 552 LHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGC 611
Query: 300 SLVEV 304
S +E+
Sbjct: 612 SWIEI 616
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 21/248 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFI------HNSLAREAIQLFKQMLVEDV 54
+Y KC + K+F + + WN ++ + +S R F++ML+E +
Sbjct: 104 VYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMM 163
Query: 55 QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
PD+ TFN L+ D++ + +HC+ ++ GF V LV +Y+KCG + A
Sbjct: 164 VPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARR 223
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+F + +D+++W+ +++ Y + E A +FN M V ++ TF+S+L S
Sbjct: 224 VFCDVSC--RDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVIS-- 279
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHY-------TCIIDLLGRAGRLDDAYNLIRTMPIKPN 227
D+ L + F + H + L + + +I++ ++ + DA + M I+ N
Sbjct: 280 ---DDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIR-N 335
Query: 228 HAVWGALL 235
W ++
Sbjct: 336 VVAWNTMI 343
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 19 SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAM 78
S + PWN+ +S R ++ + Q D + ++ L A L +
Sbjct: 28 SSHQPHPWNS-------SSRLRASMPIPNQTHFNDPNTVHLFCSNALKISAKKGYLPEGK 80
Query: 79 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII-AAYG 137
+H +LI+ GF L + + ++ +Y KC A +F +P+ ++++ W+ +I A+ G
Sbjct: 81 QLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPV--RNVVSWNIMIRASVG 138
Query: 138 KHGHGE-----MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
++ E + S F M+ + P+ +TF ++ C+ ++ G+ L F +K
Sbjct: 139 RNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVK 195
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 168/292 (57%), Gaps = 3/292 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + ++ W ++SG N E ++LF QM E ++P + F + A ++L
Sbjct: 379 IFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGS 438
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L IH +IR G L + L+ +YS+CG + A +F +P D + W+A+I
Sbjct: 439 LDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDS--VSWNAMI 496
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKHHI 192
AA +HGHG A+ LF +M++ + P+++TF ++L AC+H GL+ EG F M ++ I
Sbjct: 497 AALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGI 556
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P DHY +IDLL RAG A ++I++MP + +W ALL C H N+ELG AA
Sbjct: 557 TPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAAD 616
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
EL P G YI+L+N+YAA+G+W +V +VR ++ E G++K P S VEV
Sbjct: 617 RLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEV 668
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 38/253 (15%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN----IH 81
WNA++SG++ L EA F++M +Q D T+ SL+ A + N +H
Sbjct: 251 WNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVH 310
Query: 82 CYLIRS----GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD-------------- 123
Y++R+ + L V + L+ Y+K + A +F+ +P++D
Sbjct: 311 GYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNA 370
Query: 124 ---------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
++++ W+ +I+ ++G GE + LFN+M G++P F +
Sbjct: 371 QRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAI 430
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
ACS +G +D G + +++ + +I + R G ++ A ++ TMP +
Sbjct: 431 TACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDS 489
Query: 229 AVWGALLGACVSH 241
W A++ A H
Sbjct: 490 VSWNAMIAALAQH 502
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 56/297 (18%)
Query: 2 YAKCNCGNLSYKMFMKT--SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
Y+ L+ ++F T + + T +NA+++ + H + A+ LF QM PD
Sbjct: 81 YSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPF 140
Query: 60 TFNSLLPAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS---------L 109
TF+S+L A +++AD + +HC +I+ G L V + L+ Y C S +
Sbjct: 141 TFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLM 200
Query: 110 GYAHHIFNIIP----------------LKDKDI---------------IIWSAIIAAYGK 138
A +F+ P +++ D+ + W+A+I+ Y +
Sbjct: 201 ASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVR 260
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC----SHVGLVDEGLSLFQFMLK----- 189
G E A F M G++ ++ T+TS++ AC +G+ + G + ++L+
Sbjct: 261 RGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEP 320
Query: 190 -HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
HH + V++ +I + R+ +A + MP++ + W A+L V+ + +E
Sbjct: 321 SHHFVLSVNN--ALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSGYVNAQRIE 374
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 48 QMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 107
+L +P+ N L+ Y +++ A + + + + R + L+ YS G
Sbjct: 30 HILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVAR----TTLLSAYSSSG 85
Query: 108 SLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSV 167
++ A +FN PL +D + ++A+I AY G A++LF +M + G P+ TF+SV
Sbjct: 86 NVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSV 145
Query: 168 LHACS 172
L A S
Sbjct: 146 LSALS 150
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C + +F+ + WNA+++ + +AI+LF+QM+ ED+ PD T
Sbjct: 467 MYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRIT 526
Query: 61 FNSLLPA---YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
F ++L A ++ + + + C R G + + L+D+ + G A +
Sbjct: 527 FLTILTACNHAGLIKEGRHYFDTMC--TRYGITPGEDHYARLIDLLCRAGMFLKAQSVIK 584
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+P + IW A++A HG+ E+ + + +++
Sbjct: 585 SMPF-EAGAPIWEALLAGCRIHGNMELGIQAADRLLE 620
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 188/301 (62%), Gaps = 6/301 (1%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNATFNSL 64
G L + +F + + W V+ G+ + +A+ LF++M+ V+ ++P+ T ++
Sbjct: 194 GQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTV 253
Query: 65 LPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
PA A L ++K ++H Y+ + GF + + + L+D+Y+KCG + A +F+ +P
Sbjct: 254 FPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWR 313
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
++ + W+++++ Y G AV F +M ++GV+PN V F S+L ACSH GLV+EGL
Sbjct: 314 RNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEF 373
Query: 184 FQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK-PNHAVWGALLGACVSH 241
F M+ + ++P + HY C+ID+LGRAGRL +A + +P + N +W LLGAC H
Sbjct: 374 FGKMVNDYGLVPDIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVH 433
Query: 242 ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
+NVE+G+ + E+E + G+Y+L++N++A+VGR++DVE++R+M+++ + KLP S+
Sbjct: 434 DNVEIGKRVTKKILEMEKGHGGDYVLMSNIFASVGRFKDVERLREMIDKRNVFKLPGYSI 493
Query: 302 V 302
V
Sbjct: 494 V 494
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 57/315 (18%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQML---VEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
+N ++ + + E+++ F L + D+ T L A A L ++HC
Sbjct: 79 FNNLIRSYSLSLFPHESLKFFTHTLNNLTHSLSLDSFTLTFLAHACANLDTTHFGFHLHC 138
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG 142
+ + GF + V + L+ +YS G L A +F +P D++ + W+ I+ K G
Sbjct: 139 IVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVFGEMP--DRNTVTWNVFISGLIKWGQL 196
Query: 143 EMAVSLFNEMV--------------------------------QSGVKPNQVTFTSVLHA 170
E A S+F+ MV G++PN+VT +V A
Sbjct: 197 EFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPA 256
Query: 171 CSHVGLVDEGLSLFQFMLKHHI----IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP-IK 225
+H+G V S+ ++ K I +V+ +IDL + G ++ A L MP +
Sbjct: 257 IAHLGNVKMCESVHGYVEKRGFNAVDIRIVN---ALIDLYAKCGCIESASGLFSEMPDWR 313
Query: 226 PNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG---NYILLANLYAAVGRWRDVE 282
N W +++ + V A TFE + E G N++ ++ +A VE
Sbjct: 314 RNSVSWNSVMSGYATFGMVR----EAVDTFE-KMEKAGVRPNHVAFLSILSACSHSGLVE 368
Query: 283 K----VRDMVNEVGL 293
+ MVN+ GL
Sbjct: 369 EGLEFFGKMVNDYGL 383
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 169/306 (55%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+C N S +F + K ++ WNA+ S H EA++ +M + V D +
Sbjct: 696 MYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFS 755
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+ L L L + +H ++I+ GF V + +D+Y KCG + +F I+P
Sbjct: 756 FSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEID---DVFRILP 812
Query: 121 L-KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ K + W+ +I+A +HG A F+EM+ G+KP+ VTF S+L ACSH GLVDE
Sbjct: 813 IPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDE 872
Query: 180 GLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GL F M +P ++H CIIDLLGR+GRL +A I MP+ PN VW +LL AC
Sbjct: 873 GLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAAC 932
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H N+ELG AA FEL + Y+L +N+ A+ RW DVE VR + L+K PA
Sbjct: 933 KVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPA 992
Query: 299 QSLVEV 304
S +++
Sbjct: 993 CSWIKL 998
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 16/248 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + + K+ ++ WNA++ G + IQ F M E + + T
Sbjct: 594 MYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYIT 653
Query: 61 FNSLL-----PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
+LL P Y LK M IH +++ +GF V S L+ +Y++CG L + +I
Sbjct: 654 IVNLLGTCMSPDYL----LKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYI 709
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F++ L +K+ W+AI +A +G GE A+ M GV +Q +F+ L ++
Sbjct: 710 FDV--LANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLT 767
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
++DEG L +++K + +D Y +D+ G+ G +DD + ++ I+ + W
Sbjct: 768 VLDEGQQLHSWIIK--LGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRS-WNI 824
Query: 234 LLGACVSH 241
L+ A H
Sbjct: 825 LISALARH 832
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 115/230 (50%), Gaps = 16/230 (6%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F ++ T WN++++ HN E++ F M + D T ++LLPA
Sbjct: 407 RVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQ 466
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
LK +H + +SG + V + L+ +Y++ GS A +F+ +P +D+I W+++
Sbjct: 467 HLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPA--RDLISWNSM 524
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
+A++ + G A+ L EM+++ N VTFT+ L AC ++ E L + + H
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL----EKLKIVHAFVIHFA 580
Query: 193 IPLVDHYTCII-----DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ H+ II + G+ G +D+A + + MP + + W AL+G
Sbjct: 581 V----HHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIGG 625
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 122/278 (43%), Gaps = 7/278 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+K + +F K + A WN ++SGF+ +A+Q F M V P +
Sbjct: 191 MYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYV 250
Query: 61 FNSLLPAYAILADLKQ-AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S++ A + + A IH Y+++ G + + V + L+ Y GS+ A+ +F I
Sbjct: 251 IASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEI 310
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ +I+ W++++ Y +GH + ++++ + +G+ T +V+ C G
Sbjct: 311 --EEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTM 368
Query: 180 GLSLFQFMLKHHI-IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G + ++K + V +I + G +++A + M + + W +++ A
Sbjct: 369 GYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTIS-WNSIITAS 427
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVG 276
+ E W P+ +YI ++ L A G
Sbjct: 428 AHNGRFEESLGHFFWMRRTHPKT--DYITISALLPACG 463
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 27/248 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+ + +F + WN++++ + + AI L +ML + T
Sbjct: 496 MYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVT 555
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F + L A L LK +H ++I + L + + LV +Y K G + A + I+P
Sbjct: 556 FTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP 612
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D++ W+A+I + + FN M + G+ N +T ++L C
Sbjct: 613 --ERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSP------ 664
Query: 181 LSLFQFMLKH------HIIPL---VDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHA 229
++LKH HI+ +D Y + +I + + G L+ + + + K N +
Sbjct: 665 ----DYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANK-NSS 719
Query: 230 VWGALLGA 237
W A+ A
Sbjct: 720 TWNAIFSA 727
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 96 ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
+ LV++YSK GS+ YA H+F+ + D++ W+ +I+ + + G A+ F M ++
Sbjct: 185 TNTLVNMYSKFGSIKYAQHVFD--KMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFEN 242
Query: 156 GVKPNQVTFTSVLHACSHVGLVDEGL-SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDD 214
GV P+ S++ AC G + EG + +++K ++ V T ++ G G + +
Sbjct: 243 GVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSE 302
Query: 215 AYNLIRTMPIKPNHAVWGALL 235
A L + +PN W +L+
Sbjct: 303 ANKLFEEIE-EPNIVSWTSLM 322
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 175/309 (56%), Gaps = 7/309 (2%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFI-HNSLAREAIQLFKQMLVEDVQPD 57
+Y+KC + K+F + K WN ++SGF H L +A+ F++M PD
Sbjct: 287 LYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPD 346
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIF 116
+ +F ++ A + L+ +H I+S R+ V + V +YSKCG+L A IF
Sbjct: 347 DCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIF 406
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ +P +++ + +++IA Y +HG ++ LF M+Q + PN +TF SVL AC+H G
Sbjct: 407 DTMP--EQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGK 464
Query: 177 VDEGLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
VDEG F M K I P +HY+C+IDLLGRAG+L+ A +I TMP P W ALL
Sbjct: 465 VDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALL 524
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
GAC H NVEL AA +LEP N Y++L+N+YA+ RW + V+ ++ E G++K
Sbjct: 525 GACKKHGNVELAVKAANKFLQLEPYNAAPYVMLSNVYASANRWEEAATVKRLMRERGVKK 584
Query: 296 LPAQSLVEV 304
P S +E+
Sbjct: 585 KPGCSWIEI 593
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 5/244 (2%)
Query: 3 AKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
AK N NL++++F + + +N +++ +A+ +FK++ + D T +
Sbjct: 87 AKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVREVGLVLDGFTLS 146
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
++ A + D+ +HC+ + G+ V + ++ Y + G L A +F +
Sbjct: 147 GVISAS--VEDVGLVRQLHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRVFREMGEG 204
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
+D++ W+A+I A G+H G A+ LF EM + G++ + T SVL A + + + G+
Sbjct: 205 CRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQ 264
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGR--LDDAYNLIRTMPIKPNHAVWGALLGACVS 240
M+K + +IDL + + + + +P KP+ +W ++
Sbjct: 265 FHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIP-KPDLVLWNTMISGFSQ 323
Query: 241 HENV 244
HE++
Sbjct: 324 HEDL 327
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 188/315 (59%), Gaps = 14/315 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-----DVQ 55
MY +++++F + + WN+++ ++ EAI LF +M+ + ++Q
Sbjct: 154 MYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQ 213
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSG---FLYRLEVASILVDIYSKCGSLGYA 112
PD+AT L A + L +H + +R G F + V + LVD+Y+KCG++ A
Sbjct: 214 PDHATLVVTLSACGAIGSLDFGRKVHSF-VRDGVNSFGESISVFNALVDMYAKCGAVEEA 272
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHAC 171
+ F+ +K K+++ W+ +I + HG+GE A++LF M+ V +P+++TF VL AC
Sbjct: 273 YETFS--NMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCAC 330
Query: 172 SHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
SH GLVDEG F+ M + ++I P + HY C++DLLGRAG +AY LI++MP++ N +
Sbjct: 331 SHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAII 390
Query: 231 WGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNE 290
W LL AC ++ NVELGE + ELEP+++ +Y+LLAN+YA+ G+W ++ K R + E
Sbjct: 391 WRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQE 450
Query: 291 VGLRK-LPAQSLVEV 304
+RK P S + +
Sbjct: 451 RRVRKPEPGNSFIGI 465
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 12/245 (4%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSL-AREAIQLFKQMLVEDVQPDNATFNSLLPA 67
N + +F K K + WN ++ GF +++ + AI FK+M + +PDN TF+ +L
Sbjct: 61 NYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAH-RPDNFTFSFILKI 119
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
A L + +HC L + GF V + L+ +Y + AH +F + +++
Sbjct: 120 IARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFE--EMYQPNLV 177
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSG-----VKPNQVTFTSVLHACSHVGLVDEGLS 182
W++II + G A+ LF +MVQ ++P+ T L AC +G +D G
Sbjct: 178 SWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRK 237
Query: 183 LFQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ F+ + + + ++D+ + G +++AY M K N W ++ S
Sbjct: 238 VHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRK-NVVSWNVMILGFAS 296
Query: 241 HENVE 245
H N E
Sbjct: 297 HGNGE 301
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 29/259 (11%)
Query: 54 VQPDNATF----NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 109
+ P N T +L+ + + L IH + +GF + L ++ ++ + ++
Sbjct: 1 MSPKNTTLWKTEQTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNM 60
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKH-GHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
YA ++F+ IP D +W+ +I +G H A+ F M Q +P+ TF+ +L
Sbjct: 61 NYALNVFDKIPKPDS--FLWNTMIRGFGNSTTHSHNAIHFFKRM-QLAHRPDNFTFSFIL 117
Query: 169 HACSHVGLVDEG----LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPI 224
+ + V+ G SLF+F ++H +I + G ++ A+ L M
Sbjct: 118 KIIARLRFVNLGKQLHCSLFKFGFENHTYV----RNSLIHMYGMLKDIEIAHQLFEEM-Y 172
Query: 225 KPNHAVWGALLGACV----SHENVELGEVAARWT---FELEPENTGNYILLANLYAAVGR 277
+PN W +++ V +E ++L + EL+P++ + L+ A+G
Sbjct: 173 QPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSAC-GAIGS 231
Query: 278 W---RDVEK-VRDMVNEVG 292
R V VRD VN G
Sbjct: 232 LDFGRKVHSFVRDGVNSFG 250
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 5 CNCG--NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C+CG N +F K ++ A +A++SG++ NS E +QLF+++ +D FN
Sbjct: 182 CSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFN 241
Query: 63 -----SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
S+L A ++ ++ IH Y+ +G Y LE+ + L+D Y+KCG + A +F+
Sbjct: 242 GALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFD 301
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+ +KD + WSA+I +G+ +MA+ LF +M + G KPN+VTF VL AC+H L
Sbjct: 302 KMLVKD--VATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLF 359
Query: 178 DEGLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
E LF M K++I P ++HY CI+D+L R+G++ A I +M I+P+ A+WG+LL
Sbjct: 360 GESSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLN 419
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDM 287
C+ H + ELG+ ++ E +PE++G Y+LLAN+YA +G+W V +V ++
Sbjct: 420 GCLMHGHYELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVAEV 470
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 123/255 (48%), Gaps = 43/255 (16%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N++++ + NS +++ +F +ML +++P++ TF +L+ + L+ L+Q + +
Sbjct: 76 YNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSLEQVFTL---TM 132
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG----- 140
+SG + S +++++SK G++ A +F+ +++++ W+++++ Y G
Sbjct: 133 KSGNSSDVYFVSSVINVFSKHGAIHLARQVFD--ESSNRNVVCWTSLVSGYCSCGLVNEV 190
Query: 141 -------------------HGEMAVSLFNEMVQ------------SGVKPNQVTFTSVLH 169
G + S F+E VQ + VK N SVL+
Sbjct: 191 RDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLN 250
Query: 170 ACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA 229
AC+ +G +EG + ++ ++ + ++ T +ID + G + DA + M +K + A
Sbjct: 251 ACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVK-DVA 309
Query: 230 VWGAL-LGACVSHEN 243
W A+ LG ++ N
Sbjct: 310 TWSAMILGLAINGNN 324
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 177/312 (56%), Gaps = 11/312 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC + + +F + + W +++G+ N EA+ LF QM V+ D
Sbjct: 190 YVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVL 249
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L A A L DLK IH Y+ + + + L+ +Y+ CG + A+ +F +
Sbjct: 250 VAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRMFT--KM 307
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-----QSGVKPNQVTFTSVLHACSHVGL 176
K + W+ II A+ K G G+ A+ LF +M+ +SG++P+ TF + L ACSH G
Sbjct: 308 SWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGF 367
Query: 177 VDEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
V+EG +F+ M+ I L ++HY C++DLL RAG LD+AY LI TMP KPN A+WGALL
Sbjct: 368 VEEGCRIFESMIHTWRISLQIEHYGCMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALL 427
Query: 236 GACVSHENVELG-EVAARWTFELEPEN--TGNYILLANLYAAVGRWRDVEKVRDMVNEVG 292
G C H+N EL VA EL+ + G +LL+N+YA GRW+DV VR + E+G
Sbjct: 428 GGCRIHKNSELASRVANTLVAELDSTDQAAGYLVLLSNIYAFAGRWQDVIAVRQKMIEMG 487
Query: 293 LRKLPAQSLVEV 304
++K P QS +++
Sbjct: 488 VKKPPGQSWIQI 499
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 114/246 (46%), Gaps = 29/246 (11%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++K+F++ +T WN ++ + + +++Q + QM++ +PD T++ LL A
Sbjct: 67 AHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPDGFTYSFLLSACVR 126
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD------- 123
+++ +H ++ G+ + V + L++ Y+ CG + A ++F+ + +
Sbjct: 127 GGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSL 186
Query: 124 ----------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
++++ W+ +IA Y ++G A+SLF +M ++ V+ +Q
Sbjct: 187 LVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQ 246
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
V +VL AC+ +G + G + ++ + V ++ + G +D+AY +
Sbjct: 247 VVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRMFTK 306
Query: 222 MPIKPN 227
M K
Sbjct: 307 MSWKTT 312
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV-----Q 55
MYA C + +Y+MF K S K T W ++ F L +EA+ LFK ML + V +
Sbjct: 290 MYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIR 349
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHH 114
PD TF + L A + +++ I +I + + ++E +VD+ S+ G L A+
Sbjct: 350 PDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYGCMVDLLSRAGCLDEAYR 409
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
+ +P K D IW A++ H + E+A + N +V
Sbjct: 410 LIETMPFKPND-AIWGALLGGCRIHKNSELASRVANTLV 447
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
+ IH +I +G ++ + + L+ Y+ G L +AH +F I + + +W+ +I AY
Sbjct: 33 LQIHTQVILNGLSHKHNIIAKLLSFYAASGKLQHAHKLF--IQIHNPKTTVWNHMIRAYA 90
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD 197
+V +N+MV + +P+ T++ +L AC GLV EG L +L V
Sbjct: 91 SSITPWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVF 150
Query: 198 HYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 257
T +I+ G ++ A + M + + W +LL V + + AAR FE
Sbjct: 151 VNTNLINFYADCGGVEQARYVFDDMT-QRSVVSWNSLLVGYVKCGDFD----AARNVFEE 205
Query: 258 EP-ENTGNYILLANLYAAVGR 277
P N ++ + YA G+
Sbjct: 206 IPVRNVVSWTTMIAGYAQNGK 226
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 171/286 (59%), Gaps = 3/286 (1%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
++ WN++LS ++ N + E ++L+ M VQPD TF + + A A LA +K M
Sbjct: 473 ERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQ 532
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
+ + + G + VA+ +V +YS+CG + A + F+ I DKD+I W+A++AA+ ++
Sbjct: 533 VVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSI--DDKDLISWNAMLAAFAQN 590
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDH 198
G G + F +M+++ KPN +++ SVL CSH+GLV EG F M + I P +H
Sbjct: 591 GLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEH 650
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
++C++DLLGRAG L+ A +LI MP KPN VW ALLG+C H ++ L E AA+ EL+
Sbjct: 651 FSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELD 710
Query: 259 PENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
E + Y+LL+N+Y+ G +V +R ++ G+R S +EV
Sbjct: 711 VEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEV 756
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 40/271 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C +L+ ++F + WN++++G +H L +A+ LF QM V D
Sbjct: 322 MYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFI 381
Query: 61 FNSLL-----PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
++L P YA +L +H Y I+SG V + ++ +Y+KCG A +
Sbjct: 382 LPTILGVCSGPDYASTGEL-----LHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLV 436
Query: 116 FNIIPLK-----------------------------DKDIIIWSAIIAAYGKHGHGEMAV 146
F ++PL+ +++I+ W+++++ Y ++G E +
Sbjct: 437 FRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGL 496
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLL 206
L+ M +GV+P+ +TFT+ + AC+ + +V G+ + K + V I+ +
Sbjct: 497 KLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMY 556
Query: 207 GRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
R G + +A N ++ K + W A+L A
Sbjct: 557 SRCGLIKEAKNTFDSIDDK-DLISWNAMLAA 586
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 7/248 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + ++ WN ++S F + + + +F +M + P+ T+ S+L A A +
Sbjct: 233 QIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTS 292
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DLK ++H ++R L + L+D+Y+KCG L A +F L++ D I W+++
Sbjct: 293 DLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFK--SLREHDHISWNSL 350
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I G GE A+ LFN+M +S V ++ ++L CS G L + +K +
Sbjct: 351 ITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGM 410
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
II + + G D A + R MP++ N W A++ A + ++G+ AR
Sbjct: 411 GSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITA--FSRSGDIGK--AR 465
Query: 253 WTFELEPE 260
F++ PE
Sbjct: 466 GYFDMMPE 473
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 45/272 (16%)
Query: 16 MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP-----DNATFNSLLPAYAI 70
M K + W ++SG+ N + + F +++ D D +F S++ A
Sbjct: 100 MPVRVKDSVSWTTMISGYSQNGFHSRSFETF-SLMIRDTNDGGKNYDPFSFTSVMKACGS 158
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL--------------------- 109
L D + A+ +H + + GF + + +V +Y KCG +
Sbjct: 159 LGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSM 218
Query: 110 --GYAH--------HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
GY+ IFN +P ++D + W+ +I+ + +HG G +++F EM G P
Sbjct: 219 IYGYSQMYGPYKALQIFNRMP--ERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSP 276
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
N +T+ SVL AC+ + G L +L+ H + LV +ID+ + G LD A +
Sbjct: 277 NFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLV-FGNGLIDMYAKCGCLDLAKRV 335
Query: 219 IRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
+++ + +H W +L+ V + LGE A
Sbjct: 336 FKSLR-EHDHISWNSLITGVV---HFGLGEDA 363
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C + F K WNA+L+ F N L + I F+ ML + +P++ +
Sbjct: 555 MYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHIS 614
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ S+L + + + + + + R G E S +VD+ + G L A + +
Sbjct: 615 YVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGM 674
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
P K + +WSA++ + H +A + ++++ V+ ++
Sbjct: 675 PFK-PNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSE 715
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 174/306 (56%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + ++F + +K W +++SG + +E++ LF +ML +PD
Sbjct: 251 MYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVI 310
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A L L +H Y+ S + + + + L+D+Y+KCG + A +FN++P
Sbjct: 311 LTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLP 370
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K+I W+A I +GHG+ A+ F +V+SG +PN++TF +V AC H GLVDEG
Sbjct: 371 --SKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEG 428
Query: 181 LSLFQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
S F+ M +++ P ++HY C++DLL RA +++A LI MP+ P+ + GALL A
Sbjct: 429 RSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSAS 488
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
++ NVEL + E + +G Y+LL+N YA +W +V VR ++ E G+ K P
Sbjct: 489 STYGNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPG 548
Query: 299 QSLVEV 304
SL+ V
Sbjct: 549 SSLIRV 554
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 125/237 (52%), Gaps = 6/237 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+ C + K+F + W ++SG++ L +A+ LF +M DV P+ AT
Sbjct: 153 VYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRM---DVAPNAAT 209
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L A L L IH + + L V++ L+D+Y KC S+ A +F+ IP
Sbjct: 210 FVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIP 269
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KDI+ W+++I+ ++ + ++ LF EM+ SG +P+ V TSVL AC+ +GL+D G
Sbjct: 270 --EKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYG 327
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ +++ I V T +ID+ + G ++ A + +P K N W A +G
Sbjct: 328 RWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSK-NIRTWNAYIGG 383
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 8/219 (3%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
P N ++SG+ + AI++++ ++ PD T ++L + A + + + IH
Sbjct: 76 PCNLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLA 135
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
+++ + V + V +YS CG A +F+ +P+ +D++ W+ +I+ Y K G
Sbjct: 136 VKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPV--RDVVSWTGLISGYMKAGLFND 193
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH-HIIPLVDHYTCII 203
AV+LF M V PN TF S+L AC +G ++ G + + K+ H LV T ++
Sbjct: 194 AVALFLRM---DVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNT-LM 249
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
D+ + + DA L +P K + W +++ V ++
Sbjct: 250 DMYVKCESVTDAKRLFDEIPEK-DIVSWTSMISGLVQYQ 287
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 176/297 (59%), Gaps = 3/297 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
+ + + F + K WN+++ + L EA+ LF +M V ++ T ++L +
Sbjct: 318 DCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSC 377
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ + DL H Y+ + + + ++D+Y+KCG+L A +F +P +K+ +
Sbjct: 378 SHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMP--EKNAVS 435
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM- 187
W+ II A HG+G+ A+ +F +M SGV P+++TFT +L ACSH GLVD G F+ M
Sbjct: 436 WNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMN 495
Query: 188 LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
L I P V+HY C++DLLGR G L +A +LI+ MP+KP+ VW ALLGAC ++ N+ +G
Sbjct: 496 LTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIG 555
Query: 248 EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ + EL N+G Y+LL+N+Y+ RW D++ + ++++ G++K A S +E+
Sbjct: 556 KQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEI 612
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 56/352 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y C + ++F S++ WN++++G+ + EA+ +F++M ++PD T
Sbjct: 178 IYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFT 237
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
LL + +H +++ +G V + L+D+Y+KCG+L A +F+
Sbjct: 238 LVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFD--Q 295
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNE----------------------------- 151
+ DKD++ W+ +I AY HG + A+ FN+
Sbjct: 296 MLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLF 355
Query: 152 --MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
M SGV N T ++L +CSH+G + G ++ ++I IID+ +
Sbjct: 356 YRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKC 415
Query: 210 GRLDDAYNLIRTMPIKPNHAVWGALLGACVSH----ENVELGE-VAARWTFELEPENTG- 263
G L A ++ MP K N W ++GA H E +E+ E + A E TG
Sbjct: 416 GALQTAMDVFFGMPEK-NAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGL 474
Query: 264 --------------NYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
+Y + NL G DVE MV+ +G R L +++
Sbjct: 475 LSACSHSGLVDTGQHYFEIMNL--TFGISPDVEHYACMVDLLGRRGLLGEAI 524
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 115/235 (48%), Gaps = 11/235 (4%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++K+F + + +N ++ G+ ++S +++ L+++M+ + + P+ T +L A A
Sbjct: 87 AHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAA 146
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+ + +H + G V + +++IY CG + A +F+ I ++ ++ W+
Sbjct: 147 KSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDI--SERTLVSWN 204
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
++I Y K G E AV +F EM + G++P+ T +L + G D G +F+ H
Sbjct: 205 SMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLG----RFVHLH 260
Query: 191 HIIPLVDHYTCI----IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
++ ++ + + +D+ + G L A ++ M + + W ++ A +H
Sbjct: 261 MVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQM-LDKDVVSWTCMINAYANH 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F +K WN ++ + +EAI++F++M V PD T
Sbjct: 411 MYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEIT 470
Query: 61 FNSLLPA--YAILADLKQAMNIHCYLIRS---GFLYRLEVASILVDIYSKCGSLGYAHHI 115
F LL A ++ L D Q H + I + G +E + +VD+ + G LG A +
Sbjct: 471 FTGLLSACSHSGLVDTGQ----HYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISL 526
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
+P+K D+++WSA++ A +G+ + + ++++ G
Sbjct: 527 IKKMPVK-PDVVVWSALLGACRTYGNLAIGKQIMKQLLELG 566
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 44 QLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 103
Q+ K +L E P + T + L+ LKQ ++H +I G ++ LV
Sbjct: 22 QISKTILQELKSPTHQTLHYLIDQ---CISLKQLKHVHAQIILHGLATQVLTLGKLVSSS 78
Query: 104 SKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVT 163
+ L YAH +F+ IP +K +++ +I Y ++ L+ MV G+ PNQ T
Sbjct: 79 VQLRDLRYAHKLFDQIPQPNK--FMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFT 136
Query: 164 FTSVLHACS 172
VL AC+
Sbjct: 137 IPFVLKACA 145
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 181/308 (58%), Gaps = 7/308 (2%)
Query: 1 MYAKCNCGNLSYKMFMKT-SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
Y KC + +F + ++K W ++L+ + N A +F Q+ E V+P +
Sbjct: 253 FYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQVRKE-VEPTDF 311
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+S+L A A L L+ ++H +++ + V S LVD+Y KCGS+ A +F+ +
Sbjct: 312 MISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSEL 371
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV--QSGVKPNQVTFTSVLHACSHVGLV 177
P + +++ W+A+I Y G +MA+ LF EM G++P+ VT S+L CS VG V
Sbjct: 372 P--ESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAV 429
Query: 178 DEGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+ G+ +F+ M L + I P +H+ C++DLLGR+G +D AY I+ MPI+P +VWGALLG
Sbjct: 430 ERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLG 489
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
AC H ELG++AA FEL+ ++GN+++L+N+ A+ GRW + VR + ++G++K
Sbjct: 490 ACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKN 549
Query: 297 PAQSLVEV 304
S + V
Sbjct: 550 VGYSWIAV 557
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 142/286 (49%), Gaps = 9/286 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + MF + + A WNA +S + + + + I FK+ L +P++ T
Sbjct: 152 MYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSIT 211
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F + L A + L +H +++R G+ + VA+ L+D Y KCG + A +F+ I
Sbjct: 212 FCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIG 271
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K+++ W +++ A ++ E A +F + V+ V+P +SVL AC+ +G ++ G
Sbjct: 272 NR-KNVVSWCSMLTALVQNHEEERACMVFLQ-VRKEVEPTDFMISSVLSACAELGGLELG 329
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
S+ +K + + + ++DL G+ G +++A + +P + N W A++G
Sbjct: 330 RSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELP-ESNLVTWNAMIGGYAH 388
Query: 241 HENVELGEVAARWTFELEPENTG---NYILLANLYAAVGRWRDVEK 283
++++ A R E+ + G +Y+ L ++ + R VE+
Sbjct: 389 QGDIDM---ALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVER 431
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 3/262 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+K + N + + T + W +++SG +HN A+ F M ++VQP++ T
Sbjct: 51 MYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFT 110
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F + A A++ IH ++ G +Y + V D+Y K G G A ++F+ +P
Sbjct: 111 FPCVFKASALMQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMP 170
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+++ W+A I+ + ++ F E + +PN +TF + L+AC + ++ G
Sbjct: 171 --HRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLG 228
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV- 239
L F+++ V +ID G+ G + A + + + N W ++L A V
Sbjct: 229 RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQ 288
Query: 240 SHENVELGEVAARWTFELEPEN 261
+HE V + E+EP +
Sbjct: 289 NHEEERACMVFLQVRKEVEPTD 310
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 168/296 (56%), Gaps = 4/296 (1%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++++F + K WN+++SGF+ N + ++ F +L ++P+ + + L +
Sbjct: 440 AFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSC 499
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
D+ +H Y++R GF + + + LV +YSKCG L + +FN + ++D I W+
Sbjct: 500 TPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFN--EMVERDTITWN 557
Query: 131 AIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
AII+AY +HG G+ AV F M + G+KP+ TFT+VL ACSH GLVD+ +F M+
Sbjct: 558 AIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIMVN 617
Query: 190 -HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
+ +P VDH++CI+DLLGR+G LD+A ++ + + +L AC H N+ LG
Sbjct: 618 IYGFVPSVDHFSCIVDLLGRSGYLDEAERVVTDGYFGAHPNMCWSLFSACAVHGNLTLGR 677
Query: 249 VAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
AR E E N Y+LLAN+ A G+W + K+RDMV + G K P S +
Sbjct: 678 KVARLLLEREQNNPSVYVLLANICAEAGQWEEAAKLRDMVKQFGTTKQPGCSWIST 733
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 116/241 (48%), Gaps = 18/241 (7%)
Query: 12 YKMFMKTSKKRTA-----------PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y F K ++ R+ WN ++S F ++ +AI + +M E ++PD T
Sbjct: 333 YSFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFT 392
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ SLL A L+ IH L ++G L ++EV + L+ YS+ G + A IF+
Sbjct: 393 YGSLLSAS---DSLQMVEMIHSVLCKNG-LNKVEVLNALISSYSRNGQIKRAFQIFS--D 446
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L K +I W++II+ + +G+ + F+ ++ + +KPN + + L CS +D G
Sbjct: 447 LAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHG 506
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ ++L+H + ++ + + G LD + ++ M ++ + W A++ A
Sbjct: 507 KQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEM-VERDTITWNAIISAYSQ 565
Query: 241 H 241
H
Sbjct: 566 H 566
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 39/269 (14%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F K K A WNA+++G N A +L K M +V+ DN TF ++L +
Sbjct: 143 VFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEG 202
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L ++H +++SGFL V + L+ +Y CG + + +F + ++ + ++A+I
Sbjct: 203 LDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMI 262
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC---------------------- 171
+ E A +F +M + V ++VTF SVL +C
Sbjct: 263 DGFVSVERFEDAFLMFRDMHRGSVCLSEVTFVSVLSSCCSLRVGCQAQGLAIKMGFDCGY 322
Query: 172 -----------SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YN 217
S G V+E S+F+ M + LV + ++ + + +DA Y
Sbjct: 323 TAVNNATMTMYSFFGKVNEARSVFEIMEESR--DLVS-WNVMVSMFFQENINEDAILTYI 379
Query: 218 LIRTMPIKPNHAVWGALLGACVSHENVEL 246
+R I+P+ +G+LL A S + VE+
Sbjct: 380 KMRREGIEPDAFTYGSLLSASDSLQMVEM 408
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 11/229 (4%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY C C YK+F M+ + +NA++ GF+ +A +F+ M V
Sbjct: 231 MYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSVCLSE 290
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFN 117
TF S+L + L QA + I+ GF V + + +YS G + A +F
Sbjct: 291 VTFVSVLSSCCSLRVGCQAQGL---AIKMGFDCGYTAVNNATMTMYSFFGKVNEARSVFE 347
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
I+ + +D++ W+ +++ + + E A+ + +M + G++P+ T+ S+L A + +V
Sbjct: 348 IME-ESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSLLSASDSLQMV 406
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP 226
+ + +L + + V+ +I R G++ A+ + + K
Sbjct: 407 E----MIHSVLCKNGLNKVEVLNALISSYSRNGQIKRAFQIFSDLAYKS 451
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MY+KC + S +F + ++ T WNA++S + + +EA+ F+ M + ++PD+A
Sbjct: 531 MYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHA 590
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF ++L A + + A I ++ GF+ ++ S +VD+ + G L A +
Sbjct: 591 TFTAVLSACSHSGLVDDATRIFDIMVNIYGFVPSVDHFSCIVDLLGRSGYLDEAERVVTD 650
Query: 119 IPLKDKDIIIWSAIIAAYGKHGH---GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
+ WS + +A HG+ G L E Q+ N + + + C+ G
Sbjct: 651 GYFGAHPNMCWS-LFSACAVHGNLTLGRKVARLLLEREQN----NPSVYVLLANICAEAG 705
Query: 176 LVDEGLSL 183
+E L
Sbjct: 706 QWEEAAKL 713
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 62 NSLLPAYAILADLKQAM----NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
NSLL YA DL +I C + S + ++ S+ + YA H+F+
Sbjct: 94 NSLLSLYAKAHDLVSVELVFDDIQCPDVYSW--------TTVLSAISRLSDIDYALHVFD 145
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+P + +W+AII +G ++A L +M + V+ + TF ++L C +
Sbjct: 146 KMP--KCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGL 203
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK-PNHAVWGALLG 236
D G + ++K + +I + G + D Y + M NH + A++
Sbjct: 204 DYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMID 263
Query: 237 ACVSHENVE 245
VS E E
Sbjct: 264 GFVSVERFE 272
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 178/309 (57%), Gaps = 8/309 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKR-TAPWNAVLSGFIHNSLAREAIQLFKQMLV--EDVQPDN 58
Y KC + + +F + R +A WN ++SGF L EA+ F++ML ++ D+
Sbjct: 146 YVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDH 205
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
T S+L A DL + +H +++R+ GF + + L+D Y KCGSL + +IF
Sbjct: 206 MTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFK 265
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+ + ++ W+ +I+ YG HG G+ +V LF +M+ G +PN VT T++L +CSH GL+
Sbjct: 266 TVCYVN--LVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLL 323
Query: 178 DEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP-NHAVWGALL 235
D+G +F M+ + + P +HY C++DL R GRL++A L+ M ++WGALL
Sbjct: 324 DQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALL 383
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
CV H+NV++GEVAA F+LEP NT NY+ L +Y + G V +R + ++GL K
Sbjct: 384 AGCVMHQNVKIGEVAAHHLFQLEPNNTSNYVALWGIYQSRGMVLGVSTIRGKMRDLGLVK 443
Query: 296 LPAQSLVEV 304
P S + +
Sbjct: 444 TPGCSWINI 452
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 107/216 (49%), Gaps = 10/216 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F K ++ WN +++ + HNS+ +A+ +F+ V PD T L +
Sbjct: 56 KLFDKMPQRNMHSWNIMIASYTHNSMYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRID 115
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ H +++ G+ + V + +++ Y KCG++ A +F+ +D W+ +
Sbjct: 116 ECCLGWMCHGLVVKLGYEEIVVVNNSVLEFYVKCGTMSQALSVFSNHN-APRDSATWNLM 174
Query: 133 IAAYGKHGHGEMAVSLFNEMVQ--SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
I+ +GK G AV F EM++ +G++ + +T S+L AC G + + + F++++
Sbjct: 175 ISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVKEVHGFIVRN 234
Query: 191 HII----PLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
P+ + +ID G+ G L D+ N+ +T+
Sbjct: 235 FGFDADAPIGN---ALIDNYGKCGSLKDSENIFKTV 267
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 175/303 (57%), Gaps = 3/303 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
+AK +++ K+F ++ W +LS + E + LF++M + V PD T
Sbjct: 185 HAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTV 244
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S++ A A L D + +H ++ +GF + + + + L+D+Y KCG L A +F+
Sbjct: 245 LSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFD--RT 302
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K K +I W+A++ HG+ E A LF M+ SGV P+ VT ++L A +H G VDEG+
Sbjct: 303 KRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGI 362
Query: 182 SLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
LF+ M + + + P ++HY ++D+LGR+GRL +AYNL+ +MPI N +WGALLGAC
Sbjct: 363 RLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRI 422
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H +V +GE + EL+P+ G YILL ++Y A GR + ++R + G RK P S
Sbjct: 423 HGDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCS 482
Query: 301 LVE 303
VE
Sbjct: 483 WVE 485
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 38/273 (13%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
G+LSY MF + + T +N ++ H++ + F +M + PD +F LL
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLL 114
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLKD 123
+ + L +IH + + GF L V + L+ +Y+ G A +F + D
Sbjct: 115 KSRSFTMPLVH--DIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLD 172
Query: 124 KDIIIWSAIIAAYGKHGHGEMA-------------------------------VSLFNEM 152
DI+ WS ++ A+ K G ++A + LF EM
Sbjct: 173 VDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEM 232
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
+GV P++VT SV+ AC+ +G + G + +F+ ++ +V +ID+ G+ G L
Sbjct: 233 RLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCL 292
Query: 213 DDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
++A+ + K + W A++ C +H E
Sbjct: 293 EEAWQVFDRTKRK-SLITWNAMMMVCANHGYAE 324
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C ++++F +T +K WNA++ ++ A +A +LF+ M+ V PD T
Sbjct: 285 MYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVT 344
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+LL AYA + + + + + R G R+E +VD+ + G L A+++ +
Sbjct: 345 ILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSM 404
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
P+ D +IW A++ A HG M + ++++ +KP++
Sbjct: 405 PIPSND-VIWGALLGACRIHGDVGMGERVIKKLLE--LKPDE 443
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 175/303 (57%), Gaps = 3/303 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
+AK +++ K+F ++ W +LS + E + LF++M + V PD T
Sbjct: 185 HAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTV 244
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S++ A A L D + +H ++ +GF + + + + L+D+Y KCG L A +F+
Sbjct: 245 LSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFD--RT 302
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K K +I W+A++ HG+ E A LF M+ SGV P+ VT ++L A +H G VDEG+
Sbjct: 303 KRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGI 362
Query: 182 SLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
LF+ M + + + P ++HY ++D+LGR+GRL +AYNL+ +MPI N +WGALLGAC
Sbjct: 363 RLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRI 422
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H +V +GE + EL+P+ G YILL ++Y A GR + ++R + G RK P S
Sbjct: 423 HGDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCS 482
Query: 301 LVE 303
VE
Sbjct: 483 WVE 485
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 38/273 (13%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
G+LSY MF + + T +N ++ H++ + F +M + PD +F LL
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLL 114
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLKD 123
+ + L +IH + + GF L V + L+ +Y+ G A +F + D
Sbjct: 115 KSRSFTMPLVH--DIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLD 172
Query: 124 KDIIIWSAIIAAYGKHGHGEMA-------------------------------VSLFNEM 152
DI+ WS ++ A+ K G ++A + LF EM
Sbjct: 173 VDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEM 232
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
+GV P++VT SV+ AC+ +G + G + +F+ ++ +V +ID+ G+ G L
Sbjct: 233 RLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCL 292
Query: 213 DDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
++A+ + K + W A++ C +H E
Sbjct: 293 EEAWQVFDRTKRK-SLITWNAMMMVCANHGYAE 324
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C ++++F +T +K WNA++ ++ A +A +LF+ M+ V PD T
Sbjct: 285 MYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVT 344
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+LL AYA + + + + + R G R+E +VD+ + G L A+++ +
Sbjct: 345 ILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSM 404
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
P+ D +IW A++ A HG M + ++++ +KP++
Sbjct: 405 PIPSND-VIWGALLGACRIHGDVGMGERVIKKLLE--LKPDE 443
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 178/304 (58%), Gaps = 7/304 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTS-KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MY KC C S +F + S +K W A+L + N + + L + E +
Sbjct: 301 MYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVR----ERGDLNFY 356
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + LA + +HC +R G + + S LVD+Y+KCG + +A +F
Sbjct: 357 AFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMF--A 414
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ +++I W+++++ + ++G G A++LF +M++ G+KP+ +TF +VL ACSH GLVDE
Sbjct: 415 SMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDE 474
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G +F M ++ I P+V+HY C+IDLLGRAG +D+A L+ + + ++W ALLGAC
Sbjct: 475 GRKVFTLMGEYGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYDKSLWAALLGACT 534
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ E AR ELEP+ +Y+LL N+Y VGRW D ++R ++ + G++K+ +
Sbjct: 535 KCSDYRTAERVARKMIELEPDFHLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKKMAGK 594
Query: 300 SLVE 303
S ++
Sbjct: 595 SWID 598
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 126/240 (52%), Gaps = 5/240 (2%)
Query: 1 MYAKCNCG-NLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
+Y K N G +LS+ +F K W +++SG+ + L ++I LF +ML VQP+
Sbjct: 94 LYFKLNPGPHLSHARHLFDSLHVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPN 153
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
T +S++ A + L D+ H ++ GF + V+ L+D+Y ++ A +F+
Sbjct: 154 AFTLSSVIKACSALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFD 213
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGL 176
+ +KD D+ W++II+ + ++ + ++ F M + GV P+ TF ++L AC+++GL
Sbjct: 214 ELFVKD-DVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGL 272
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+ +G + ++ V + ++D+ G+ G + + + + + N+ W A+LG
Sbjct: 273 LRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLG 332
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 172/280 (61%), Gaps = 3/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN +++G N + + M + +PD TF S++ + + LA L Q IH +I
Sbjct: 254 WNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVI 313
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G + V S LV +YSKCGSL + F + +++D+++WS++IAAYG HG E A
Sbjct: 314 KAGASSVVTVISSLVSMYSKCGSLQDSIKAF--LECEERDVVLWSSMIAAYGFHGQCEKA 371
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYTCIID 204
+ LFN+ + + N+VTF S+L+ACSH GL D+GL F M+ K+ + ++HYTC++D
Sbjct: 372 IKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVD 431
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
LLGR+G L++A +IR+MP+ + +W LL AC H+N E+ A ++P++ +
Sbjct: 432 LLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRIDPQDPAS 491
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
Y+L+A ++A+ RW++V +VR + + ++K P S VEV
Sbjct: 492 YVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEV 531
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC S K F++ ++ W+++++ + + +AI+LF E++ + T
Sbjct: 330 MYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVT 389
Query: 61 FNSLLPAYAILADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F SLL A + + ++ ++ + G RLE + +VD+ + G L A I +
Sbjct: 390 FLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETIIRSM 449
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
P+ D IIW +++A H + EMA + E+++
Sbjct: 450 PV-SADAIIWKTLLSACKIHKNEEMARRVAEEVLR 483
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 29 VLSGFIHNSLAREAIQLFKQM----LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
+ S I + + ++ L KQ+ D N LL Y+ +L A+ + +
Sbjct: 80 LFSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRM 139
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
R ++ +I++ Y + G++ A ++F+ + ++++ W+A++ K G E
Sbjct: 140 PRRNYMS----CNIMIKAYLEMGNIENAKNLFD--EMTERNVATWNAMVTGLVKFGLNEE 193
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
A+ LF+ M G P++ +F SVL C+H+ + G F ML++
Sbjct: 194 AL-LFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVG-DRFTLMLRN 237
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 186/304 (61%), Gaps = 2/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA C + + +MF + KK T W A++ G+ N +A +A+ +F++M++ V+PD TF
Sbjct: 254 YALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHRVRPDEFTF 313
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S L A A +A LK IH +L+R+ V S +VD+Y+KCGS+ A IFN
Sbjct: 314 SSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSMETARRIFNFTE- 372
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+D+++W+ +I+A +G+G+ AV + N+M++SGVKPN+ T ++L+ACSH GLV +GL
Sbjct: 373 HMQDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACSHSGLVCDGL 432
Query: 182 SLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F+ M H +IP ++HY +IDLLGRAG ++ + + KP V +LL C
Sbjct: 433 QFFKSMTNDHGVIPDLEHYAHLIDLLGRAGCFVESMKDLFMIDCKPGDHVLYSLLCVCRP 492
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+ ++ +G A + + +P ++ Y LL+++YAA+ W V++ R +++E LR+ + S
Sbjct: 493 NGSIGVGREVAEFLIKWQPHSSAAYGLLSSIYAALVTWGLVDEARHIMDERRLRQDRSTS 552
Query: 301 LVEV 304
+E+
Sbjct: 553 WIEI 556
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 29/265 (10%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K + +F K +K WNA++ G+ H EA++ + M V + TF
Sbjct: 122 YVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMRRVCVGYNEFTF 181
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S+L L + + IH ++ GFL + V+S +VD Y+KCG + A +F+ + +
Sbjct: 182 ASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTV 241
Query: 122 KD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
+D K+ W+A+I Y ++G A+ +F +M
Sbjct: 242 RDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKM 301
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
+ V+P++ TF+S L AC+ + + G + F+L+++I P + ++D+ + G +
Sbjct: 302 IMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSM 361
Query: 213 DDAYNLIRTMPIKPNHAVWGALLGA 237
+ A + + +W ++ A
Sbjct: 362 ETARRIFNFTEHMQDVVLWNTMISA 386
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 172/295 (58%), Gaps = 7/295 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + ++ WNA++ G EA++ F ML E P+ +TF + A + +A
Sbjct: 247 RVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIA 306
Query: 73 DLKQAMNIHCYLIRSGFLYRLE--VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L + H I+ FL +L V + L+ Y+KCGS+ + IF+ I ++++ W+
Sbjct: 307 SLGFGRSFHACAIK--FLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKI--CKRNVVSWN 362
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF-QFMLK 189
A+I Y +G G A+SLF M G+KPN+V+ +L AC+H GLVDEG F + ++
Sbjct: 363 AVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIE 422
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
+ +HY C++DLL R+GR +A N IR MP P W A+LG C H N+ELGE+
Sbjct: 423 SPNLLKPEHYACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNIELGEL 482
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
AA+ L+P++ +Y++++N ++A GRW DV ++R + E G++++P S +EV
Sbjct: 483 AAKNILALDPDDVSSYVMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSSWIEV 537
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 29 VLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSG 88
+++ F S +AI LF +ML ++P+ TF ++L L + IH I++
Sbjct: 131 IITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCAIKTS 190
Query: 89 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSL 148
+ V S LVD+Y K S+ A F + +++ ++ +I Y K G E A+ +
Sbjct: 191 LCSNVFVGSALVDLYVKLSSIEEAQKAFE--DTEYPNVVSYTTLIGGYLKSGRFEDALRV 248
Query: 149 FNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
FNEM + V +++ +++ CS +G +E + F ML+ IP + C I
Sbjct: 249 FNEMPERNV----ISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAI 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
YAKC S +F K K+ WNAV+ G+ HN EAI LF++M E ++P+ +
Sbjct: 336 FYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVS 395
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY----RLEVASIL--------VDIYSKCGS 108
LL A H L+ GFLY R+E ++L VD+ ++ G
Sbjct: 396 LLGLLLACN-----------HAGLVDEGFLYFNKARIESPNLLKPEHYACMVDLLARSGR 444
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
A + +P + I W AI+ H + E+
Sbjct: 445 FTEAQNFIRRMPF-NPGIGFWKAILGGCQIHHNIELG 480
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 179/305 (58%), Gaps = 4/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNA 59
Y+K + + ++F + K +NA+++ + +S +EA+ LF ML D + PD
Sbjct: 273 YSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKM 332
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S++ A + L +L+ I + G + +A+ L+D+Y+KCGS+ A+ +F+
Sbjct: 333 TLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFH-- 390
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
L+ +D++ +SA+I G +G AV LF M + PN VT+T +L A +H GL +E
Sbjct: 391 GLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEE 450
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G F M + I+P VDHY ++DLLGRAG LD+AY LI MP++PN VWGALL AC
Sbjct: 451 GYRCFISMKDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGALLLACR 510
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+N++LGE+A + +LE E G Y LL+ +YA VG+W D +K+ V + K+P
Sbjct: 511 LHDNLKLGEIAVQHCIKLESETAGYYSLLSGIYATVGKWNDAKKLTTGVEGKKIIKIPGC 570
Query: 300 SLVEV 304
S ++
Sbjct: 571 SWTQL 575
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 44/268 (16%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C G++ + K+F + K WN++LSG+I E + F ++ ++DV ++N
Sbjct: 150 CKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDV----ISWN 205
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP-- 120
++ YA + +A CYL + + ++ Y CGS+ A +F+ +P
Sbjct: 206 CMVSGYAKAGKMDRA----CYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRR 261
Query: 121 ---------------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
+ DKD++ ++A+IA Y + + A+ LFN M+
Sbjct: 262 NSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVML 321
Query: 154 Q--SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY-TCIIDLLGRAG 210
+ S + P+++T SV+ ACS +G + E + + + I L DH T +IDL + G
Sbjct: 322 KPDSSLHPDKMTLASVISACSQLGNL-EHWRWIESQINNFGIVLDDHLATALIDLYAKCG 380
Query: 211 RLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+D AY L + K + + A++ C
Sbjct: 381 SIDKAYELFHGLR-KRDVVAYSAMIYGC 407
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 52/273 (19%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W V+ F EA+ L+ QM + P + +S+L + A + D + IH ++
Sbjct: 72 WGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIHGHVH 131
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ GF + V + L+D+Y K G + A +F+ +P DK+++ W+++++ Y K G+
Sbjct: 132 KFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMP--DKNVVSWNSLLSGYIKGGN---- 185
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD--HYTCII 203
+DEG F IPL D + C++
Sbjct: 186 -------------------------------LDEGQRFFDE------IPLKDVISWNCMV 208
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
+AG++D A L + MP + N A W ++ V ++ V AR F+ P
Sbjct: 209 SGYAKAGKMDRACYLFQQMP-ERNFASWNTMITGYVDCGSI----VEARELFDAMPRR-- 261
Query: 264 NYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
N + L + A + DV R++ +++ + L
Sbjct: 262 NSVSLITMIAGYSKSGDVHSARELFDQMDDKDL 294
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + +Y++F K+ ++A++ G N A +A++LF++M E + P+ T
Sbjct: 375 LYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVT 434
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L AY ++ + +G + ++ I+VD+ + G L A+ + +P
Sbjct: 435 YTGILTAYNHAGLAEEGYRCFISMKDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMP 494
Query: 121 LKDKDIIIWSAIIAAYGKHGH---GEMAV 146
++ ++ +W A++ A H + GE+AV
Sbjct: 495 MQ-PNVGVWGALLLACRLHDNLKLGEIAV 522
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 112 AHHIFNIIP-LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
+++I +I+ L++ D W +I + + G AVSL+ +M + G+ P+ +S+L +
Sbjct: 54 SNYILSILHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKS 113
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
C+ V GL + + K V T ++DL + G + A + MP K N
Sbjct: 114 CARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDK-NVVS 172
Query: 231 WGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGR 277
W +LL + N++ G+ R+ E+ ++ ++ + + YA G+
Sbjct: 173 WNSLLSGYIKGGNLDEGQ---RFFDEIPLKDVISWNCMVSGYAKAGK 216
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 171/296 (57%), Gaps = 3/296 (1%)
Query: 10 LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
L+ ++F + + WN ++ + S+ EAI L ++M + ++ D T + A
Sbjct: 418 LALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACG 477
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L L A I+ Y+ ++ +++ + LVD++S+CG A +F ++ +D+ W
Sbjct: 478 YLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFE--NMEKRDVSAW 535
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+A I G+ + A+ LF+EM++ VK + F ++L A SH G VD+G LF M K
Sbjct: 536 TAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEK 595
Query: 190 -HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
H + P + HY C++DLLGRAG L++A++L+++MPIKPN +WG+ L AC H+NVE
Sbjct: 596 IHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFAN 655
Query: 249 VAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A +L PE G ++LL+N+YA+ G+W DV +VR + E G +K+ S +EV
Sbjct: 656 YADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEV 711
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 126/246 (51%), Gaps = 3/246 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA C +L K+F + ++ W ++++G+ ++A+EA+ LF +M+ V+P+ T
Sbjct: 177 YAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTM 236
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ A A L DL+ + + G V + L+D+Y KCG + IF+
Sbjct: 237 VCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFD--EF 294
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
DK++++++ I++ Y +HG + + +EM+Q G +P++VT S + AC+ +G + G
Sbjct: 295 SDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGK 354
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
S ++ ++ + L + IID+ + G+ + A + +M K W +L+ V
Sbjct: 355 SSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK-TVVTWNSLIAGLVRD 413
Query: 242 ENVELG 247
+EL
Sbjct: 414 GELELA 419
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 126/265 (47%), Gaps = 36/265 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++F + S K +N ++S ++ + LA E + + +ML + +PD T
Sbjct: 277 MYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVT 336
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNII 119
S + A A L DL + H Y+ R+G L RL+ +++ ++D+Y KCG A +F+
Sbjct: 337 MLSTIAACAQLGDLSVGKSSHAYVFRNG-LERLDNISNAIIDMYMKCGKREAACKVFD-- 393
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS------------------------ 155
+ +K ++ W+++IA + G E+A+ +F EM +S
Sbjct: 394 SMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDL 453
Query: 156 -------GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
G+K ++VT + AC ++G +D ++ ++ K+ I + T ++D+ R
Sbjct: 454 LREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSR 513
Query: 209 AGRLDDAYNLIRTMPIKPNHAVWGA 233
G +A + M K + + W A
Sbjct: 514 CGDPLNAMRVFENME-KRDVSAWTA 537
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 88/162 (54%), Gaps = 3/162 (1%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
N ++ G+ + L +EAI ++ M+ V + PDN TF LL A + + + + +H ++
Sbjct: 100 NTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVV 159
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ G + L VA+ L+ Y+ CG + +F+ + +++++ W+++I Y + A
Sbjct: 160 KMGLVKDLFVANSLIHFYAACGKVDLGRKVFD--EMLERNVVSWTSLINGYSVVNMAKEA 217
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
V LF EMV+ GV+PN VT + AC+ + ++ G + M
Sbjct: 218 VCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLM 259
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+++C + ++F K+ + W A + A+ AI+LF +ML +DV+ D+
Sbjct: 510 MFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFV 569
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +LL A++ + Q + + + G ++ +VD+ + G L A + +
Sbjct: 570 FVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSM 629
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P+K D +IW + +AA KH + E A
Sbjct: 630 PIKPND-VIWGSFLAACRKHKNVEFA 654
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 148/246 (60%), Gaps = 3/246 (1%)
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T+ SLL A + + + IH +++ GF L V + L+ +YSKCG+ A +FN
Sbjct: 469 TYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFN-- 526
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++D ++I W++II + KHG A+ LF M+++GVKPN VT+ +VL ACSHVGL+DE
Sbjct: 527 DMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDE 586
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
F M +H I+P ++HY C++DLLGR+G L +A I +MP + VW LG+C
Sbjct: 587 AWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSC 646
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H N +LGE AA+ E EP + YILL+NLYA GRW DV +R + + + K
Sbjct: 647 RVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAG 706
Query: 299 QSLVEV 304
S +EV
Sbjct: 707 SSWIEV 712
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 21/307 (6%)
Query: 1 MYAK-CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQP 56
M+ K C+ +L + K+F K +K W +++ EAI LF +MLV P
Sbjct: 201 MFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVP 260
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
D T L+ A + L +H ++IRSG + L V LVD+Y+KCG + A +F
Sbjct: 261 DRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVF 320
Query: 117 NIIPLKDKDIIIWSAIIAAY--GKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSH 173
+ +++ +++ W+A++ Y G G+ A+ +F+ M +Q GV PN TF+ VL AC+
Sbjct: 321 D--GMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACAS 378
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
+ D G + +K + + ++ + ++GR++ A + K
Sbjct: 379 LPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEK------NL 432
Query: 234 LLGACVSHENVELGEVAARWTFELEPENTGN------YILLANLYAAVGRWRDVEKVRDM 287
+ V NV+ + + + E E G+ Y L + A +G E++ M
Sbjct: 433 VSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAM 492
Query: 288 VNEVGLR 294
V ++G R
Sbjct: 493 VVKIGFR 499
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 164/356 (46%), Gaps = 65/356 (18%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPD 57
+Y+K N ++ +F M+ SK+ +++++S F +N +A+++F Q+L++D V P+
Sbjct: 96 LYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPN 155
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLG---YAH 113
F +++ A K + + +++++G+ + V L+D++ K SL A
Sbjct: 156 EYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESAR 215
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACS 172
+F+ +++K+++ W+ +I ++G+ + A+ LF EM V SG P++ T T ++ C+
Sbjct: 216 KVFD--KMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCA 273
Query: 173 HV-----------------------------------GLVDEGLSLFQFMLKHHIIP--- 194
+ GLV E +F M +H+++
Sbjct: 274 EIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTA 333
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTM----PIKPNHAVWGALLGACVSHENVELGEVA 250
LV+ Y + G G +A + M + PN + +L AC S + + GE
Sbjct: 334 LVNGY-----VRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQV 388
Query: 251 ARWTFEL---EPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
T +L + GN L ++YA GR K D++ E + L ++++V+
Sbjct: 389 HGQTIKLGLSAIDCVGNG--LVSVYAKSGRMESARKCFDVLFE---KNLVSETVVD 439
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 19/185 (10%)
Query: 44 QLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN---------IHCYLIRSGFLYRLE 94
QL K + ++ +T N+ L ++L LKQ + +H L S
Sbjct: 31 QLHKAITTLNLTDTESTHNNKLITSSLL--LKQCIRTKNTHLGKLLHHKLTTSNLPLDTL 88
Query: 95 VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV- 153
+ + L+ +YSK A IF + +D++ +S+II+ + + + AV +F++++
Sbjct: 89 LLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLL 148
Query: 154 QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI----IDLLGRA 209
Q GV PN+ FT+V+ AC G GL LF F+LK D + C+ ID+ +
Sbjct: 149 QDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLK---TGYFDSHVCVGCELIDMFVKG 205
Query: 210 GRLDD 214
L D
Sbjct: 206 CSLAD 210
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + ++F W ++++GF + A +A++LF ML V+P++ T
Sbjct: 511 MYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVT 570
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS--GFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+ ++L A + + + +A H +R G + R+E + +VD+ + G L A N
Sbjct: 571 YIAVLSACSHVGLIDEAWK-HFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINS 629
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P D D ++W + + H + ++
Sbjct: 630 MPF-DADALVWRTFLGSCRVHRNTKLG 655
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 165/289 (57%), Gaps = 1/289 (0%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K F K + W+ ++SG+ + + A++LF +ML ++P+ T S+ A A L
Sbjct: 404 KTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLG 463
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L++ H Y+ + + + L+D+Y+KCGS+ A FN I + + W+AI
Sbjct: 464 TLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAI 523
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HH 191
I HGH M + +F++M + +KPN +TF VL AC H GLV+ G +F+ M ++
Sbjct: 524 ICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYN 583
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+ P + HY C+ID+LGRAG L++A +IR+MP++ + +WG LL AC +H NV +GE AA
Sbjct: 584 VEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAA 643
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
L P + G +LL+N+YA G+W +V VR ++ + + P S
Sbjct: 644 ENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + + ++F K W ++ G+I REA+++++ ML P+
Sbjct: 261 YAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMI 320
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA--------- 112
+L+ A + +H +++ GF + + ++ Y+ CG + A
Sbjct: 321 VNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVK 380
Query: 113 --------------------HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
H + + +D+ WS +I+ Y + H +MA+ LF++M
Sbjct: 381 DHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKM 440
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY-TCIIDLLGRAGR 211
+ G+KPN+VT SV A + +G + EG ++M + IP D+ +ID+ + G
Sbjct: 441 LAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYM-RSESIPFNDNLRAALIDMYAKCGS 499
Query: 212 LDDA---YNLIR--TMPIKPNHAVWGALLGACVSHENVEL 246
++ A +N IR + P W A++ SH + +
Sbjct: 500 INSALQFFNQIRDEVSSVSP----WNAIICGLASHGHASM 535
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 30/251 (11%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F K + ++ GF+ N REA+++FK M V P++ T +++ A + L
Sbjct: 140 KLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLG 199
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK---------- 122
++ +H +++ + + V++ L+ Y C + A +F+ +P +
Sbjct: 200 EVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLN 259
Query: 123 -------------------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVT 163
DKD+I W +I Y + G A+ ++ M+Q+G PN+V
Sbjct: 260 GYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVM 319
Query: 164 FTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP 223
+++ AC + +G L ++K T II G +D A L +
Sbjct: 320 IVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLAC-LQFEVG 378
Query: 224 IKPNHAVWGAL 234
+K + W AL
Sbjct: 379 VKDHLESWNAL 389
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 9/175 (5%)
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA-SILVDIYSKCGSLGYAHHIFNIIP 120
NSL+ YA D+K A L+ GF V+ +I+V Y + G + A +F+++P
Sbjct: 92 NSLINMYAKCGDIKNAQ-----LLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMP 146
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K + ++ +I + ++G A+ +F +M GV PN +T +V+ ACSH+G V
Sbjct: 147 --NKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNC 204
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ ++K ++ LV T ++ + +A L MP + N W +L
Sbjct: 205 RMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMP-ERNLVTWNVML 258
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 180/304 (59%), Gaps = 9/304 (2%)
Query: 7 CGNL-SYKMFMKT--SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
CG++ S +M ++K W ++L+ + N A +F Q E V+P + +S
Sbjct: 257 CGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISS 315
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L A A L L+ ++H +++ + V S LVD+Y KCGS+ A +F+ +P +
Sbjct: 316 VLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP--E 373
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMV--QSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++++ W+A+I Y G +MA+ LF EM G++P+ VT S+L CS VG V+ G+
Sbjct: 374 RNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGI 433
Query: 182 SLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+F+ M L + I P +H+ C++DLLGR+G +D AY I+ M I+P +VWGALLGAC
Sbjct: 434 QIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRM 493
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H ELG++AA FEL+ ++GN+++L+N+ A+ GRW + VR + ++G++K S
Sbjct: 494 HGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYS 553
Query: 301 LVEV 304
+ V
Sbjct: 554 WIAV 557
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 144/286 (50%), Gaps = 9/286 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + MF + ++ A WNA +S + + + +AI FK+ L +P++ T
Sbjct: 152 MYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSIT 211
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F + L A + L +H +++R G+ + VA+ L+D Y KCG + A +FN I
Sbjct: 212 FCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIG 271
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K+++ W +++AA ++ E A +F + + V+P +SVL AC+ +G ++ G
Sbjct: 272 NR-KNVVSWCSMLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELG 329
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
S+ +K + + + ++D+ G+ G +++A + +P + N W A++G
Sbjct: 330 RSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAMIGGYAH 388
Query: 241 HENVELGEVAARWTFELEPENTG---NYILLANLYAAVGRWRDVEK 283
++++ A R E+ + G +Y+ L ++ + R VE+
Sbjct: 389 QGDIDM---ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVER 431
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+K + N + + T + W +++SG +HN A+ F M ++VQP++ T
Sbjct: 51 MYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFT 110
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F + A A + IH ++ G +Y + V D+Y K G G A ++F+ +P
Sbjct: 111 FPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMP 170
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+++ W+A I+ + A+ F E + +PN +TF + L+AC + ++ G
Sbjct: 171 --QRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLG 228
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV- 239
L F+++ V +ID G+ G + A + + + N W ++L A V
Sbjct: 229 RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQ 288
Query: 240 SHENVELGEVAARWTFELEPEN 261
+HE V + E+EP +
Sbjct: 289 NHEEERACMVFLQARKEVEPTD 310
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 74 LKQAMNIHCYLIRS---GFLYRLEVASI-------LVDIYSKCGSLGYAHHIFNIIPLKD 123
L+ A++ HC ++ + R V + LV++YSK L A H+ ++ L
Sbjct: 13 LESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHL-- 70
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
+ ++ W+++I+ + A+ F M + V+PN TF V A + V + G +
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LK +I V D+ + G DA N+ MP + N A W A + V
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMP-QRNLATWNAYISNAV 185
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 183/293 (62%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F +K W ++SGF+ N EA+ F +M E +P+ T +S+L A A L
Sbjct: 375 ELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLV 434
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L + + IH ++++ Y L + + L+ Y+KCG++ A+ IF + + + +++ ++++
Sbjct: 435 ALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIF--VDVVEPNVVSYNSV 492
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHH 191
I + ++G GE A+S++ M ++PN+VTF +VL AC+H GL++EG +LF M ++
Sbjct: 493 INGFAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYG 552
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P DHY C++DLLGRAG LD+A + +R+MP++P+ VWGALL A +H+ ++L ++AA
Sbjct: 553 IEPEADHYACMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLAKLAA 612
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ ELEP N Y++L+N Y+A G+ + + VR N G++K P S + +
Sbjct: 613 QHITELEPANATPYVVLSNTYSASGQKFEGDLVRKTKNLKGIKKSPGCSWITI 665
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
YAKC +YK+F+ + +N+V++GF N EA+ ++K+M E ++P+ T
Sbjct: 464 FYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFGEEALSMYKRMQNESLEPNRVT 523
Query: 61 FNSLLPAYAILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F ++L A +++ N+ + R G + + +VD+ + G L A H +
Sbjct: 524 FLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEADHYACMVDLLGRAGLLDEAIHFVRSM 583
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
PL+ +W A++AA H ++A
Sbjct: 584 PLEPHS-GVWGALLAASCAHQRIDLA 608
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAILA 72
+F + ++ W+A++ G++ L LF M E V+ ++ T ++
Sbjct: 212 LFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCG 271
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+K+ + IH + R GF + +++ ++ +YS G A +F+ + +KD++ W+++
Sbjct: 272 RVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFS--GMGNKDLVTWNSL 329
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
I+ Y + + A +F M + + +++T+++ + G + + + LF
Sbjct: 330 ISGYIYNNEVDAAYEVFERMPEKDL----ISWTAMIRGFATDGRIGKAVELFD 378
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 100/243 (41%), Gaps = 49/243 (20%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + +F + S+K W A+L+ + N A +LF +M + AT+N+++ Y
Sbjct: 47 NAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEM----PERTTATYNAMISGY 102
Query: 69 AILADLKQAMNI-HCYLIRSGFLYRLEV-------------------------------- 95
++ N+ Y + + F R EV
Sbjct: 103 -----IRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYREAPHEFRDP 157
Query: 96 --ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
++ L++ Y K G + A +F + + +D++ WSA++ + G + A LF+ M
Sbjct: 158 VCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMP 217
Query: 154 QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRL 212
+ V V++++++ GL + G LF M + ++ + T +I G GR+
Sbjct: 218 ERNV----VSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRV 273
Query: 213 DDA 215
+
Sbjct: 274 KEG 276
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 174/304 (57%), Gaps = 15/304 (4%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML----------VEDVQPDNATFNS 63
+F + + WNAV+SG N E I+LF++M+ + +P+ T
Sbjct: 189 VFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVC 248
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L A L+ IH Y+ R GF+ V++ LVD+Y KCGSL A +F + +
Sbjct: 249 VLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMD--QR 306
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ--SGVKPNQVTFTSVLHACSHVGLVDEGL 181
K + W+++I Y HG E A++ F +MV+ GV+P++VTF +L+AC+H GLV++G
Sbjct: 307 KGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGC 366
Query: 182 SLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F+ M+K + I P + HY C+IDLLGRAG+ D+A ++++ M ++P+ VWG+LL C
Sbjct: 367 GYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKV 426
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H +L E AA+ E++P N G +LAN+Y +G+W ++ V + + K+P S
Sbjct: 427 HGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCS 486
Query: 301 LVEV 304
+EV
Sbjct: 487 WIEV 490
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 56/290 (19%)
Query: 2 YAKCNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
+ N NL Y ++F + A+++ F +S +LFK ML +++P+N
Sbjct: 47 FCSLNLSNLHYAHQIFNHIHSPNIYLFTAIITAF--SSQQHTTFKLFKTMLNSNIRPNNF 104
Query: 60 TFNSLLPAYA--ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC-GSLGYAHHIF 116
+ +L + L DL +H +++ GFL V + LVD YSK G L AH +F
Sbjct: 105 IYPHVLKSVKERFLVDL-----VHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVF 159
Query: 117 ------NII-----------------------PLKDKDIIIWSAIIAAYGKHGHGEMAVS 147
NI+ + D+D+ W+A+I+ ++G +
Sbjct: 160 DEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIR 219
Query: 148 LFNEMVQS----------GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD 197
LF EMV + G KPNQVT VL AC H G++ G + ++ +H + VD
Sbjct: 220 LFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFV--VD 277
Query: 198 HY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
+ ++D+ G+ G L+ A + M + W +++ H E
Sbjct: 278 SFVSNALVDMYGKCGSLELARKVFE-MDQRKGLTSWNSMINCYALHGKCE 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV--EDVQPDN 58
MY KC L+ K+F +K WN++++ + + +AI F++M+ V+PD
Sbjct: 287 MYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDE 346
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
TF LL A ++Q +I+ G ++ L+D+ + G A +
Sbjct: 347 VTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVK 406
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+ + + D ++W +++ HG ++A ++V+ + P+ + ++L
Sbjct: 407 GMSM-EPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVE--IDPHNGGYGTML 454
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 172/305 (56%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F + W V+SG + N +A+ + QM + VQPD T
Sbjct: 544 MYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYT 603
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L+ A ++L L+Q IH +++ + V + LVD+Y+KCG++ A+ +F
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR--R 661
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ + + +W+A+I +HG+ E A++ FNEM GV P++VTF VL ACSH GL +
Sbjct: 662 MNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDA 721
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M K + + P ++HY+C++D L RAG + +A ++ +MP + + ++ LL AC
Sbjct: 722 YKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACR 781
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ E GE A F ++P ++ Y+LL+N+YAA +W + R+M+ V ++K P
Sbjct: 782 VQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGF 841
Query: 300 SLVEV 304
S +++
Sbjct: 842 SWIDM 846
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 122/224 (54%), Gaps = 7/224 (3%)
Query: 24 APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCY 83
A WNA++ GF + REA++LF M + D TF + A L L+Q IH
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525
Query: 84 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGE 143
+I+ F Y L V S ++D+Y KCG + A +FN IP D + W+ +I+ ++G E
Sbjct: 526 VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD--VAWTTVISGCVENGEEE 583
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII--PLVDHYTC 201
A+ +++M +GV+P++ TF +++ ACS + +++G + ++K + P V T
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTS 641
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
++D+ + G ++DAY L R M + + A+W A++ H N E
Sbjct: 642 LVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMIVGLAQHGNAE 684
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 12/268 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F+ WN LS ++ EA+ F+ M+ V D+ T+ +L A L
Sbjct: 252 KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ IH ++R G+ + VA+ +++Y K GS+ YA +F +K+ D+I W+ +
Sbjct: 312 HLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFG--QMKEVDLISWNTV 369
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE----GLSLFQFML 188
I+ + G E ++ LF ++++SG+ P+Q T TSVL ACS ++E G + L
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCAL 426
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
K I+ T +ID+ + G++++A L + A W A++ +N E
Sbjct: 427 KAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDNYR--E 483
Query: 249 VAARWTFELEPENTGNYILLANLYAAVG 276
++ E + I AN A G
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAG 511
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K N + +MF + + WN V+SG + L +++LF +L + PD T
Sbjct: 341 MYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFT 400
Query: 61 FNSLLPAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+L A + L + +H +++G + V++ L+D+YSK G + A +F+
Sbjct: 401 ITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFH-- 458
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
D+ W+A++ + + A+ LF+ M + G K +Q+TF + A + + +
Sbjct: 459 NQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQ 518
Query: 180 GLSLFQFMLKHHIIPLVDHY-----TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
G + ++K HY + I+D+ + G + A + +P P+ W +
Sbjct: 519 GKQIHAVVIKMRF-----HYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTV 572
Query: 235 LGACVSHENVE 245
+ CV + E
Sbjct: 573 ISGCVENGEEE 583
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 1 MYAKCNCGNLSYKMFMKT--SKKRTAPWNAVLSGFIHN------SLAREAIQLFKQMLVE 52
MYAKC + K+F T S + +NA+L+ + H EA +F+ +
Sbjct: 57 MYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQS 116
Query: 53 DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 112
+ T + L + + + Y ++ G + + VA LV+IY+K + A
Sbjct: 117 VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREA 176
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+F+ +P++D +++W+ ++ AY + G G+ + LF+ +SG++P+ V+ ++L
Sbjct: 177 RVLFDRMPVRD--VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 63/297 (21%)
Query: 62 NSLLPA-YAIL------ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
+SLLP ++IL +DL H ++ SG V + L+ +Y+KCGSL A
Sbjct: 10 SSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARK 69
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGH------GEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+F+I P D+D++ ++AI+AAY G A +F + QS + + T + +
Sbjct: 70 LFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLF 129
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
C G +L + +K + V ++++ + R+ +A L MP++ +
Sbjct: 130 KLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DV 188
Query: 229 AVWGALLGA-------------------------CVSHENVELGEVAARWTFELEPENTG 263
+W ++ A CVS + +G V + FE E E
Sbjct: 189 VLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMG-VGKKTVFERELEQVR 247
Query: 264 NY------------------ILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
Y L + L A G W V+ RDM+ ++P SL
Sbjct: 248 AYATKLFVCDDDSDVTVWNKTLSSYLQAGEG-WEAVDCFRDMIKS----RVPCDSLT 299
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 172/305 (56%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F + W V+SG + N +A+ + QM + VQPD T
Sbjct: 544 MYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYT 603
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L+ A ++L L+Q IH +++ + V + LVD+Y+KCG++ A+ +F
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR--R 661
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ + + +W+A+I +HG+ E A++ FNEM GV P++VTF VL ACSH GL +
Sbjct: 662 MNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDA 721
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M K + + P ++HY+C++D L RAG + +A ++ +MP + + ++ LL AC
Sbjct: 722 YKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACR 781
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ E GE A F ++P ++ Y+LL+N+YAA +W + R+M+ V ++K P
Sbjct: 782 VQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGF 841
Query: 300 SLVEV 304
S +++
Sbjct: 842 SWIDM 846
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 122/224 (54%), Gaps = 7/224 (3%)
Query: 24 APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCY 83
A WNA++ GF + REA++LF M + D TF + A L L+Q IH
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525
Query: 84 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGE 143
+I+ F Y L V S ++D+Y KCG + A +FN IP D + W+ +I+ ++G E
Sbjct: 526 VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD--VAWTTVISGCVENGEEE 583
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII--PLVDHYTC 201
A+ +++M +GV+P++ TF +++ ACS + +++G + ++K + P V T
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTS 641
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
++D+ + G ++DAY L R M + + A+W A++ H N E
Sbjct: 642 LVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMIVGLAQHGNAE 684
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 12/268 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F+ WN LS ++ EA+ F+ M+ V D+ T+ +L A L
Sbjct: 252 KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ IH ++R G+ + VA+ +++Y K GS+ YA +F +K+ D+I W+ +
Sbjct: 312 HLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFG--QMKEVDLISWNTV 369
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE----GLSLFQFML 188
I+ + G E ++ LF ++++SG+ P+Q T TSVL ACS ++E G + L
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCAL 426
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
K I+ T +ID+ + G++++A L + A W A++ +N E
Sbjct: 427 KAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDNYR--E 483
Query: 249 VAARWTFELEPENTGNYILLANLYAAVG 276
++ E + I AN A G
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAG 511
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K N + +MF + + WN V+SG + L +++LF +L + PD T
Sbjct: 341 MYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFT 400
Query: 61 FNSLLPAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+L A + L + +H +++G + V++ L+D+YSK G + A +F+
Sbjct: 401 ITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFH-- 458
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
D+ W+A++ + + A+ LF+ M + G K +Q+TF + A + + +
Sbjct: 459 NQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQ 518
Query: 180 GLSLFQFMLKHHIIPLVDHY-----TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
G + ++K HY + I+D+ + G + A + +P P+ W +
Sbjct: 519 GKQIHAVVIKMRF-----HYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTV 572
Query: 235 LGACVSHENVE 245
+ CV + E
Sbjct: 573 ISGCVENGEEE 583
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 1 MYAKCNCGNLSYKMFMKT--SKKRTAPWNAVLSGFIHN------SLAREAIQLFKQMLVE 52
MYAKC + K+F T S + +NA+L+ + H EA +F+ +
Sbjct: 57 MYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQS 116
Query: 53 DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 112
+ T + L + + + Y ++ G + + VA LV+IY+K + A
Sbjct: 117 VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREA 176
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+F+ +P++D +++W+ ++ AY + G G+ + LF+ +SG++P+ V+ ++L
Sbjct: 177 RVLFDRMPVRD--VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 62 NSLLPA-YAIL------ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
+SLLP ++IL +DL H ++ SG V + L+ +Y+KCGSL A
Sbjct: 10 SSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARK 69
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGH------GEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+F+I P D+D++ ++AI+AAY G A +F + QS + + T + +
Sbjct: 70 LFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLF 129
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
C G +L + +K + V ++++ + R+ +A L MP++ +
Sbjct: 130 KLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DV 188
Query: 229 AVWGALLGACVSHENVE--LGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVR 285
+W ++ A V + LG +A L P+ +L + R++E+VR
Sbjct: 189 VLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVR 247
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 172/305 (56%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K+F + W V+SG + N +A+ + QM + VQPD T
Sbjct: 544 MYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYT 603
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L+ A ++L L+Q IH +++ + V + LVD+Y+KCG++ A+ +F
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR--R 661
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ + + +W+A+I +HG+ E A++ FNEM GV P++VTF VL ACSH GL +
Sbjct: 662 MNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDA 721
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M K + + P ++HY+C++D L RAG + +A ++ +MP + + ++ LL AC
Sbjct: 722 YKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACR 781
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ E GE A F ++P ++ Y+LL+N+YAA +W + R+M+ V ++K P
Sbjct: 782 VQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGF 841
Query: 300 SLVEV 304
S +++
Sbjct: 842 SWIDM 846
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 122/224 (54%), Gaps = 7/224 (3%)
Query: 24 APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCY 83
A WNA++ GF + REA++LF M + D TF + A L L+Q IH
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525
Query: 84 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGE 143
+I+ F Y L V S ++D+Y KCG + A +FN IP D + W+ +I+ ++G E
Sbjct: 526 VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD--VAWTTVISGCVENGEEE 583
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII--PLVDHYTC 201
A+ +++M +GV+P++ TF +++ ACS + +++G + ++K + P V T
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTS 641
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
++D+ + G ++DAY L R M + + A+W A++ H N E
Sbjct: 642 LVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMIVGLAQHGNAE 684
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 12/268 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F+ WN LS ++ EA+ F+ M+ V D+ T+ +L A L
Sbjct: 252 KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ IH ++R G+ + VA+ +++Y K GS+ YA +F +K+ D+I W+ +
Sbjct: 312 HLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFG--QMKEVDLISWNTV 369
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE----GLSLFQFML 188
I+ + G E ++ LF ++++SG+ P+Q T TSVL ACS ++E G + L
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCAL 426
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
K I+ T +ID+ + G++++A L + A W A++ +N E
Sbjct: 427 KAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDNYR--E 483
Query: 249 VAARWTFELEPENTGNYILLANLYAAVG 276
++ E + I AN A G
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAG 511
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K N + +MF + + WN V+SG + L +++LF +L + PD T
Sbjct: 341 MYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFT 400
Query: 61 FNSLLPAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+L A + L + +H +++G + V++ L+D+YSK G + A +F+
Sbjct: 401 ITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFH-- 458
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
D+ W+A++ + + A+ LF+ M + G K +Q+TF + A + + +
Sbjct: 459 NQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQ 518
Query: 180 GLSLFQFMLKHHIIPLVDHY-----TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
G + ++K HY + I+D+ + G + A + +P P+ W +
Sbjct: 519 GKQIHAVVIKMRF-----HYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTV 572
Query: 235 LGACVSHENVE 245
+ CV + E
Sbjct: 573 ISGCVENGEEE 583
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 1 MYAKCNCGNLSYKMFMKT--SKKRTAPWNAVLSGFIHN------SLAREAIQLFKQMLVE 52
MYAKC + K+F T S + +NA+L+ + H EA +F+ +
Sbjct: 57 MYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQS 116
Query: 53 DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 112
+ T + L + + + Y ++ G + + VA LV+IY+K + A
Sbjct: 117 VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREA 176
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+F+ +P++D +++W+ ++ AY + G G+ + LF+ +SG++P+ V+ ++L
Sbjct: 177 RVLFDRMPVRD--VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 62 NSLLPA-YAIL------ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
+SLLP ++IL +DL H ++ SG V + L+ +Y+KCGSL A
Sbjct: 10 SSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARK 69
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGH------GEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+F+I P D+D++ ++AI+AAY G A +F + QS + + T + +
Sbjct: 70 LFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLF 129
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
C G +L + +K + V ++++ + R+ +A L MP++ +
Sbjct: 130 KLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DV 188
Query: 229 AVWGALLGACVSHENVE--LGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVR 285
+W ++ A V + LG +A L P+ +L + R++E+VR
Sbjct: 189 VLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVR 247
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 172/280 (61%), Gaps = 3/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN +++G N + + M + +PD TF S++ + + LA L Q IH +I
Sbjct: 273 WNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQGKQIHAEVI 332
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G + V S LV +YSKCGSL + F + +++D++IWS++IAAYG HG E A
Sbjct: 333 KAGASSVVSVISSLVSMYSKCGSLQDSIKAF--LECEERDVVIWSSMIAAYGFHGQCEKA 390
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYTCIID 204
+ LFN+ + + N+VTF S+L+ACSH GL D+GL F M+ K+ + ++HYTC++D
Sbjct: 391 IKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVD 450
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
LLGR+G L++A +IR+MP+ + +W LL AC H+N E+ A ++P++ +
Sbjct: 451 LLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRIDPQDPAS 510
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
Y+L+A ++A+ RW++V +VR + + ++K P S VEV
Sbjct: 511 YVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEV 550
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 11/286 (3%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + +++ A WNA+++G + L EA+ LF +M V PD +F S+L A L
Sbjct: 160 LFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRA 219
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L +H Y+ + GF + V L +Y K GSL I +P + +++ W+ ++
Sbjct: 220 LFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMP--NCNLVAWNTLM 277
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
A ++ E + + M +G +P+++TF SV+ +CS + + +G + ++K
Sbjct: 278 AGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQGKQIHAEVIKAGAS 337
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 253
+V + ++ + + G L D+ + + +W +++ A H E A +
Sbjct: 338 SVVSVISSLVSMYSKCGSLQDSIKAFLECEER-DVVIWSSMIAAYGFHGQC---EKAIKL 393
Query: 254 TFELEPEN-TGNYILLANLYAAVGRWRDVEKVRD----MVNEVGLR 294
+ E EN GN + +L A +K D MV + GL+
Sbjct: 394 FNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLK 439
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC S K F++ ++ W+++++ + + +AI+LF E++ + T
Sbjct: 349 MYSKCGSLQDSIKAFLECEERDVVIWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVT 408
Query: 61 FNSLLPAYAILADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F SLL A + + ++ ++ + G RLE + +VD+ + G L A + +
Sbjct: 409 FLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSM 468
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
P+ D IIW +++A H + EMA + E+++
Sbjct: 469 PV-SADAIIWKTLLSACKIHKNEEMARRVAEEVLR 502
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 174/286 (60%), Gaps = 4/286 (1%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILADLKQAMN 79
+ WN++L+ + E +++F++M+ + P+ AT S+L A A L L +
Sbjct: 280 RNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGLW 339
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
+H Y+ + + + + L+ +Y+KCG++ A +F +P+K I+ W+++I YG H
Sbjct: 340 VHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKS--IVSWNSMIMGYGLH 397
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDH 198
G+G+ A+ +F EM ++G KPN+ TF VL ACSH G+V EG F M + + I P V+H
Sbjct: 398 GNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMRRVYKIEPKVEH 457
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
Y C++DLL RAG + ++ LI + +K A+WGALL C +H ++EL E A+ ELE
Sbjct: 458 YGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALLSGCRTHLDLELAENVAKRLVELE 517
Query: 259 PENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
P++ YILL+++YAA GRW DVE+VR + GL+K A SLV +
Sbjct: 518 PQDISPYILLSDVYAAQGRWDDVERVRLAMKINGLQKEAASSLVHL 563
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++ G++ N R+A +LF +M DV ++N ++ Y + DL A + +
Sbjct: 189 YNTMIDGYVKNGGIRDARKLFDEMYERDV----FSWNCMIAGYVSVGDLAAAKELFEAMP 244
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP-LKDKDIIIWSAIIAAYGKHGHGEM 144
+ + ++D + G++ A FN + + ++++ W++++A + + +
Sbjct: 245 NKDVV----SWNCMIDGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGE 300
Query: 145 AVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
+ +F M++SG PN+ T SVL AC+++G ++ GL + ++ + I V TC++
Sbjct: 301 CLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLETCLL 360
Query: 204 DLLGRAGRLDDAYNLIRTMPIK 225
+ + G +D A ++ MP+K
Sbjct: 361 TMYAKCGAMDLASDVFVEMPVK 382
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 174/296 (58%), Gaps = 6/296 (2%)
Query: 13 KMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
K+F M K W A++SG+ EAI+LF++M +E+V+PD ++L A A
Sbjct: 197 KLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACAD 256
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L L IH Y+ + + + + L+D+Y+K G++ A +F +K K II W+
Sbjct: 257 LGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFE--NMKHKTIITWT 314
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFML- 188
+IA HG G+ A+ +F+ M + VKPN+VTF ++L ACSHVGLV+ G F M
Sbjct: 315 TMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRS 374
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
++ I P ++HY C+IDLLGRAG L +A ++ MP + N A+WG+LL A + EL E
Sbjct: 375 RYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAE 434
Query: 249 VAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A R LEP + GNY LL+N YA++GRW + VR ++ + G+ K+P S +EV
Sbjct: 435 EALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEV 490
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 147/358 (41%), Gaps = 80/358 (22%)
Query: 3 AKCNCGNLSYKMFMKTSKKRTAP---WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
A N + SY +F + R P +N ++ +++S A+ A+ +F+ + + D+
Sbjct: 56 ASLNYPSYSYSIF-TFNHNRPFPIFVYNNIIYA-LYSSNAKLAVSIFRSVRRLGLSFDSY 113
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS--------------- 104
+ +L + L D IHC + +G + V S L+ +YS
Sbjct: 114 SLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLIQMYSCYDVCSARKLFDEFG 173
Query: 105 --------------KCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFN 150
K G + A +F+ + +DKD+ W+A+I+ Y + + A+ LF
Sbjct: 174 GNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFR 233
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAG 210
M VKP+++ +VL AC+ +G + G + ++ KH + +V Y +ID+ ++G
Sbjct: 234 RMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSG 293
Query: 211 RLDDAYNLIRTMP-----------------------------------IKPNHAVWGALL 235
+ A L M +KPN + A+L
Sbjct: 294 NIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAIL 353
Query: 236 GACVSHENVELGE-----VAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMV 288
AC VELG + +R+ E + E+ G I L +GR +++ ++MV
Sbjct: 354 SACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDL------LGRAGHLQEAKEMV 405
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MYAK + ++F K W +++G + L +EA+++F M ED V+P+
Sbjct: 288 MYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEV 347
Query: 60 TFNSLLPAYAILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF ++L A + + ++ + + R G ++E ++D+ + G L A +
Sbjct: 348 TFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLR 407
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P + + IW +++AA + G E+A
Sbjct: 408 MPF-EANAAIWGSLLAASTRCGDAELA 433
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 172/296 (58%), Gaps = 3/296 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAK N + ++F + K W+++++G + A LF M+ +Q D+
Sbjct: 386 IYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFV 445
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L A + LA + +H ++ G+ V + L+D+Y+KCG + A +F
Sbjct: 446 ISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGC-- 503
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L + D + W++II ++G E A+SL ++M++SG KPN++T VL AC H GLV+E
Sbjct: 504 LSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEA 563
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F + +H +IP +HY C++D+LG+AGR ++A LI MP KP+ +W +LLGAC
Sbjct: 564 WDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACG 623
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
+++N +L + A PE+ YI+L+N+YAA+G W V KVR+ V ++G ++
Sbjct: 624 TYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKR 679
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRT-----APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ 55
MY+ C + + K+F + + + A WN++LSG + N EA+ + M V+
Sbjct: 280 MYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVR 339
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
D TF+ +L +L A +H ++I SG+ V SIL+DIY+K GS+ A +
Sbjct: 340 FDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRL 399
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F +P DKD++ WS++I + G ++A SLF +M+ G++ + + VL ACS +
Sbjct: 400 FERLP--DKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLA 457
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G + LK T +ID+ + G ++DA +L + + + W +++
Sbjct: 458 SHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLS-EIDTMSWTSII 516
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
C + E E + +E N I + + A VE+ D+ N +
Sbjct: 517 VGCAQNGRAE--EAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSI 570
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 5/240 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + + K+F K + WN++++G + N+ +R A++ M + ++ D TF
Sbjct: 181 YAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSR-ALRFVSMMHGKGLKMDEFTF 239
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII-- 119
S+L A +L IHCY+I+SGF S L+D+YS C L A IF+
Sbjct: 240 PSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFR 299
Query: 120 -PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ + +W+++++ + +G A+S+ + M +SGV+ + TF+ VL C + +
Sbjct: 300 NSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLS 359
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+ F++ + +ID+ + G +++A L +P K + W +L+ C
Sbjct: 360 LASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDK-DVVAWSSLITGC 418
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 134/287 (46%), Gaps = 50/287 (17%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNA 59
+Y+KC+ + MF + + W ++S ++S+ EA+ L+ +M+ + QP+
Sbjct: 47 VYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQF 106
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
++++L A ++ +++ +H ++ ++ + + + L+D+Y KCGSL A +F I
Sbjct: 107 LYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEI 166
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ------------------------- 154
P K+ W+ +I Y K G + A+ LF++M +
Sbjct: 167 PCKNA--TSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFV 224
Query: 155 -----SGVKPNQVTFTSVLHACSHVGLVDE---GLSLFQFMLK-------HHIIPLVDHY 199
G+K ++ TF SVL AC G DE G + +++K + I L+D Y
Sbjct: 225 SMMHGKGLKMDEFTFPSVLKAC---GCSDELMLGREIHCYIIKSGFESSCYCISALIDMY 281
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GACVSHENVE 245
+ LL A ++ D Y R + + A+W ++L G V+ + VE
Sbjct: 282 SS-CKLLSEATKIFDQY--FRNSSVSESLALWNSMLSGHVVNGDYVE 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+K A ++H ++I+SGF + + + ++ +YSKC S+ A ++F+ +P ++I+ W+ ++
Sbjct: 19 IKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMP--HRNIVSWTTMV 76
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHVGLVDEG----LSLFQFML 188
+ A+SL+NEM++S + +PNQ +++VL AC V V+ G +FQ L
Sbjct: 77 SVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKL 136
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
I+ + ++D+ + G L DA + +P K N W L+
Sbjct: 137 DVDIVLM----NALLDMYVKCGSLRDAQRVFCEIPCK-NATSWNTLI 178
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 171/300 (57%), Gaps = 5/300 (1%)
Query: 8 GNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNL + K+F + W +++S + +A++LF++M+V V+PD T S+L
Sbjct: 257 GNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVL 316
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A A + L +H Y+ + + V + L+D+Y KCG++ +F + +D
Sbjct: 317 SACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFE--EMGKRD 374
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ W+++IA +G + A++LF+ M++ GV+P TF VL AC+H G+VD+GL F+
Sbjct: 375 SVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFE 434
Query: 186 FMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
M + + + P + HY C++DLL R+G L AY I+ MP+ P+ VW LL A H N+
Sbjct: 435 SMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNL 494
Query: 245 ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
L E+A + E +P N+GNYIL +N YA RW DV K+R ++ E + K A S VE+
Sbjct: 495 HLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEI 554
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 122/247 (49%), Gaps = 8/247 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + + + WN ++ G+ + EAI+ + M + + +N T+ LL A A ++
Sbjct: 32 ELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARIS 91
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
++ +H +++ GF L V++ L+ Y+ LG+A +F+ + ++D++ W+++
Sbjct: 92 NV-SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFD--EMSERDLVSWNSL 148
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I YG+ + +F EM + VK + VT V+ AC+ +G ++ +++ ++ +
Sbjct: 149 ICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKV 208
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
V +ID+ GR +D A + M + N W A++ N+ VAAR
Sbjct: 209 EVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDR-NMVSWNAMIMGYGKAGNL----VAAR 263
Query: 253 WTFELEP 259
F+ P
Sbjct: 264 KLFDDMP 270
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC +F + K+ + W +V++G N A A+ LF ML E V+P + T
Sbjct: 353 MYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGT 412
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A A + + + + R G ++ +VD+ S+ G+LG A+ +
Sbjct: 413 FVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRM 472
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P+ D D+++W +++A HG+ +A
Sbjct: 473 PM-DPDVVVWRILLSASQVHGNLHLA 497
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 170/305 (55%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+ KC + K+F + W ++++ ++ N E + L M E + T
Sbjct: 271 MFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFT 330
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F LL A+A +A L+ +H + + G R+ V + L+++YSKCG + ++ +F
Sbjct: 331 FAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVF--FD 388
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++DII W+A+I Y +HG G+ A+ LF +M+ +G PN VTF VL AC+H+ LV+EG
Sbjct: 389 MRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEG 448
Query: 181 LSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
++KH + P ++HYTC++ +L RAG L++A N +RT +K + W LL AC
Sbjct: 449 FYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACN 508
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N LG A +++P + G Y LL+N+YA W V +R M+ E ++K P
Sbjct: 509 IHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGV 568
Query: 300 SLVEV 304
S +E+
Sbjct: 569 SWIEI 573
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 141/300 (47%), Gaps = 9/300 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC+ L+ +F + S + +N ++ G++H+ E ++LFK M+ QP+
Sbjct: 64 LYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYV 123
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF---- 116
F ++L A A + + M H +L + G ++ V S LV +YSKC + A +
Sbjct: 124 FTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEH 183
Query: 117 -NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
NI D D +++++ A + G AV + MV GV + VT+ SV+ C +
Sbjct: 184 GNID--NDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIR 241
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ GL + +LK + V + ++D+ G+ G + A + + + N VW +L+
Sbjct: 242 DLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR-NVVVWTSLM 300
Query: 236 GACVSH-ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
A + + E E + + E N + +L N +A + R + + V ++G++
Sbjct: 301 TAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIK 360
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 166/289 (57%), Gaps = 3/289 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + + W +++ G++++ +AI LF+ + E + D+ T LL A + L
Sbjct: 396 EVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLG 455
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L +HC+ R L V + L+ Y+KCG L A +IF + ++ + W+A+
Sbjct: 456 CLSFIKEVHCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQ--QMTERCLTSWNAM 513
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I AY HG+ + LF+ M V P++VTFTS+L ACSH GLV+EGL +F M+K +
Sbjct: 514 IGAYAMHGNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYA 573
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I+P HY+CI+DLL RAGRL +AYNL+++MP + A ALL AC + + E+GE
Sbjct: 574 IVPNEVHYSCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEAIG 633
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+ +LEP ++G Y L++N+ A GRW +V ++R M + P S
Sbjct: 634 KQILKLEPHSSGPYALVSNICAQGGRWDEVAQIRAMTKNTEFKSTPGYS 682
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 126/248 (50%), Gaps = 7/248 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKR---TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
MY KC L+ +F K ++ WNA+++G++ N A EA +LF++M+ +V PD
Sbjct: 180 MYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPD 239
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
T + + L L++ M+IH Y+I G L ++ LVD+Y K + A +F
Sbjct: 240 LLTLANAIFCCVELNYLRRGMSIHGYMITMGVELDLVASTALVDLYCKI-DITKARKLFE 298
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
L +KD ++++ ++ Y ++G AV++F EMV++ N F +++ A S + +
Sbjct: 299 --RLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDI 356
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
S+ ++L+H I V+ II + G + DA + M + + W +++
Sbjct: 357 RLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTR-DLVSWTSMIKG 415
Query: 238 CVSHENVE 245
V H +++
Sbjct: 416 YVYHGHID 423
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 122/233 (52%), Gaps = 7/233 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + K +N +++G++ N L EA+ +F++M+ + + A F +L+ A + L
Sbjct: 295 KLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLR 354
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
D++ +IH Y++R + +E+A+ ++ Y+K G + A +FN ++ +D++ W+++
Sbjct: 355 DIRLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFN--RMRTRDLVSWTSM 412
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD--EGLSLFQFMLKH 190
I Y HGH + A+ LF + + + + VT +L A S +G + + + F + H
Sbjct: 413 IKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFH 472
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
V++ +I + G+L A + + M + + W A++GA H N
Sbjct: 473 GKDLSVNN--SLITTYAKCGKLCTARYIFQQMTERCLTS-WNAMIGAYAMHGN 522
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L L+ + +H I+ F V S L+ +YS+ G + AH +F+ I +KDI ++
Sbjct: 45 LGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEIT--NKDIFAYT 102
Query: 131 AIIAAYGKHGHGEMAVSLFNE---MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
++I AYG H G FN M Q G+ PN+VT S++HA + + + EG ++ +
Sbjct: 103 SMITAYG-HSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYA 161
Query: 188 LKHHIIPLVDHY-TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV--WGALLGA 237
++ I D + T ++D+ + G + A ++ M + V W AL+
Sbjct: 162 VRREIGLGDDVFETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAG 214
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 165/288 (57%), Gaps = 3/288 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK C L+ K+F +K WN ++ + + L EA+ L + M E V+P+++T
Sbjct: 255 MYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSST 314
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
LL Y+ ++ + + + + + LVD+Y+KCG L A IF
Sbjct: 315 LVGLLSVYSASGSMQGVRYVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFE--R 372
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+++KD+ W+A+I+ +G HG A+SLFN M G +PN++TF ++L ACSH GLV EG
Sbjct: 373 MENKDVKSWTAVISGHGIHGQAINAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEG 432
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ F+ M++ H P V+HY C+IDLLGRAG L +A+ LI+++PIK + W LL AC
Sbjct: 433 VEFFKRMVQEHGFSPWVEHYGCLIDLLGRAGMLHEAFELIKSLPIKGDATSWRTLLSACR 492
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDM 287
H +V+LGE + + +L++ YAA GR D+ ++++M
Sbjct: 493 VHGDVKLGECVKDVLSNFYTPHPTDSLLISGTYAAAGRISDLTRMQEM 540
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 5 CNCGNL--SYKMFMKTSKKRT-APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
C CG + + K+F + ++ WN ++ G + S LF + ++ AT
Sbjct: 155 CVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSFVFDLFLKRGCSGIRASVATT 214
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
SLL A + ++H Y I+ GF L V + L+D+Y+K G + A +F+ +
Sbjct: 215 LSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVV- 273
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+KD+++W+ +I Y + E AV+L M Q GVKPN T +L S G + +G+
Sbjct: 274 -EKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSM-QGV 331
Query: 182 SLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+++ + L V T ++D+ + G LD+A + M K + W A++
Sbjct: 332 RYVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKS-WTAVISG 387
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 16/191 (8%)
Query: 55 QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGF------LYRLEVASILVDIYSKCGS 108
Q + F+ L A + + HCY+I++ L +L ASI
Sbjct: 7 QAISNAFHKLTLALKSCKTITEIHQFHCYMIKTSLTNVPFTLSKLLAASIF--------D 58
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+ YA IF I ++ ++ +++ ++ Y A+ +FN++ SG + +F +V+
Sbjct: 59 MNYASTIFTCI--QNPNLFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVM 116
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
AC V G + ++K VD I+ GR+DDA + P + +
Sbjct: 117 KACGRSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPERNDL 176
Query: 229 AVWGALLGACV 239
W L+G CV
Sbjct: 177 VSWNILMGGCV 187
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 123/269 (45%), Gaps = 9/269 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +L G+ ++ + +A+ +F ++ D +F +++ A ++ +H ++
Sbjct: 77 YNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMKACGRSFEVGFGRGVHGIVV 136
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+SG + +++ + ++ Y CG + A +F+ P ++ D++ W+ ++
Sbjct: 137 KSGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPERN-DLVSWNILMGGCVLVSDYSFV 195
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
LF + SG++ + T S+L A +G G SL + +K ++ T +ID+
Sbjct: 196 FDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDM 255
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLG----ACVSHENVELGEVAARWTFELEPEN 261
+ G + A + + ++ + +W L+ +C+ E V L + + E N
Sbjct: 256 YAKTGCIYLARKVFDGV-VEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQ---EGVKPN 311
Query: 262 TGNYILLANLYAAVGRWRDVEKVRDMVNE 290
+ + L ++Y+A G + V V ++ E
Sbjct: 312 SSTLVGLLSVYSASGSMQGVRYVTSLIEE 340
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 177/305 (58%), Gaps = 4/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC + S +F + + WN+++SG++ N EA++LF +M VE + T
Sbjct: 207 YAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTM 266
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
SLL A A L L+ +H Y+ R+ F + V + ++D+Y KCGS+ A +F P
Sbjct: 267 VSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCP- 325
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHVGLVDEG 180
+ + W++II +GH A F+++ S + KP+ V+F VL AC H+G +++
Sbjct: 326 -RRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKA 384
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F+ M+ K+ I P + HYTCI+D+LG+AG L++A LI+ MP+KP+ +WG+LL +C
Sbjct: 385 RDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCR 444
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H NV++ AA+ +EL P + Y+L++N++AA ++ + + R ++ E K P
Sbjct: 445 KHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGC 504
Query: 300 SLVEV 304
S +E+
Sbjct: 505 SSIEL 509
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 38/262 (14%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N +YK+F++ WN ++ F +S + AI LF ML +QP T+ S+ AY
Sbjct: 78 NYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAY 137
Query: 69 AILADLKQAMNIHCYLIRSGF---------------------------------LYRLEV 95
A L +H +++ G LY +V
Sbjct: 138 AQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDV 197
Query: 96 ASI--LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
+I ++ Y+KCG + + ++F+ + + + W+++I+ Y ++G A+ LFN+M
Sbjct: 198 VAINSMIMGYAKCGEIDESRNLFD--DMITRTSVSWNSMISGYVRNGKLMEALELFNKMQ 255
Query: 154 QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
G + ++ T S+L+AC+H+G + G + ++ ++H V T IID+ + G ++
Sbjct: 256 VEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVE 315
Query: 214 DAYNLIRTMPIKPNHAVWGALL 235
+A + T P + + W +++
Sbjct: 316 NAVEVFETCP-RRGLSCWNSII 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MY KC + ++F ++ + WN+++ G N REA + F ++ ++PD+
Sbjct: 307 MYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSV 366
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHI 115
+F +L A L + +A + ++ Y +E + + +VD+ + G L A +
Sbjct: 367 SFIGVLTACKHLGAINKARDYFELMMNK---YEIEPSIKHYTCIVDVLGQAGLLEEAEEL 423
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+PLK D IIW +++++ KH + ++A
Sbjct: 424 IKGMPLK-PDAIIWGSLLSSCRKHRNVQIA 452
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 80 IHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGK 138
I+ ++I++G L + L S G++ YA+ +F +P + ++ W+ II A+ +
Sbjct: 47 IYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMP--NPNLYSWNTIIRAFSR 104
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH 198
+ A+SLF +M+ S ++P +T+ SV A + +G G L ++K + D
Sbjct: 105 SSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQN--DQ 162
Query: 199 YTC--IIDLLGRAGRLDDA 215
+ C II + G + +A
Sbjct: 163 FICNTIIYMYANGGLMSEA 181
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 175/307 (57%), Gaps = 6/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK S K+F + + + T WNA++SG+ N L +EA F +++++P+ T
Sbjct: 430 MYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSA-IKEIKPNQYT 488
Query: 61 FNSLLPAYAILAD--LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F S+L A A D LK H +LI+ G VA L+D+Y K G++ + +FN
Sbjct: 489 FGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNE 548
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
P +K W+ +I+AY +HG E +SL+ E+ + G + +TF SVL AC G+VD
Sbjct: 549 TP--EKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVD 606
Query: 179 EGLSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G +F M+K H I P +HY+ ++D+LGR GRLD+A L+ +P P +V +LLG+
Sbjct: 607 VGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGS 666
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H NVE+ E +++P ++G Y+L+ANLYA G W V +VR + G++K
Sbjct: 667 CKLHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEV 726
Query: 298 AQSLVEV 304
S V+V
Sbjct: 727 GFSWVDV 733
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNS--LAREAIQLFKQMLVEDVQPDN 58
MY++ + + ++F + + + WNA+LSG+ EA+ LF M+ E + D+
Sbjct: 231 MYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDH 290
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+ + A +L+ IH + G+ + V ++L+ YSKC L A +F
Sbjct: 291 VSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQ- 349
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ ++++ W+ +I+ E VSLFN M GV PN VTF +LHA + +V
Sbjct: 350 -DMSARNVVSWTTLISI-----DEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVK 403
Query: 179 EGLSLFQFMLK 189
EGL + LK
Sbjct: 404 EGLMVHGLCLK 414
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 15/251 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K L+ +F S WN +LSGF + +A+ M + V D T
Sbjct: 128 MYCKAGRFELALCVFEGLSCPDIVSWNTILSGF---EKSVDALNFACFMHLNGVVFDPVT 184
Query: 61 FNSLLP-----AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
+ + L Y + +H +++ GF + + + LV +YS+ G L A +
Sbjct: 185 YTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRV 244
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHG--HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
FN + + +D++ W+A+++ Y + G +G AV LF MV+ G+ + V+ T + AC +
Sbjct: 245 FNEMTI--RDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGY 302
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
++ G + K V +I + L DA + + M + N W
Sbjct: 303 TKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSAR-NVVSWTT 361
Query: 234 LLGACVSHENV 244
L+ + ENV
Sbjct: 362 LIS--IDEENV 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 21/248 (8%)
Query: 12 YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAIL 71
+ +F K + + N + F+H +L +A+ +FK + L A
Sbjct: 38 HNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACR 97
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+ IH +++ +GF+ R+ V++ L+ +Y K G A +F L DI+ W+
Sbjct: 98 GEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFE--GLSCPDIVSWNT 155
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
I++ + K A++ M +GV + VT+T+ L C D+ F F L+ H
Sbjct: 156 ILSGFEKSVD---ALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDD--HGFLFGLQLH 210
Query: 192 IIPLVDHYTC-------IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL------GAC 238
+ + + C ++ + R G LD+A + M I+ + W A+L G C
Sbjct: 211 SLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIR-DLVSWNAMLSGYAQEGEC 269
Query: 239 VSHENVEL 246
E V L
Sbjct: 270 YGLEAVLL 277
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 182/301 (60%), Gaps = 7/301 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV--EDVQP--DNATFNSL 64
+++ K+F + ++ W+ ++S + N+L EA+ +F+QM + D++ D A S+
Sbjct: 129 DVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSV 188
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
+ A + L ++ + +H +++R G + + + + L+++YS+CG + + +F+ +P ++
Sbjct: 189 ISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMP--ER 246
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++ W+A+I HG A+ +F EM +SG+KP+ F VL ACSH GLV++G +F
Sbjct: 247 NVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSHGGLVEDGWRVF 306
Query: 185 QFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
+ M I P+++HY C++DLLGRAG + +A++ + MP+KPN +W LLGACV+H +
Sbjct: 307 ESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNH 366
Query: 244 VELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+ L E A EL+P + G+Y+LL+N Y VG W +R+ + + + K P S V
Sbjct: 367 LGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLRNSMKQNRIVKEPGLSFVH 426
Query: 304 V 304
+
Sbjct: 427 I 427
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C + S K+F + ++ W A+++G + +REA+++F +M ++PD A
Sbjct: 226 MYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGAL 285
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + ++ + + G LE +VD+ + G + A +
Sbjct: 286 FIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEM 345
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
PLK +IW ++ A H H +A
Sbjct: 346 PLKPNS-VIWRTLLGACVNHNHLGLA 370
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 201 bits (510), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 167/280 (59%), Gaps = 5/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN++++ F +S EA+ L+K M E D +T S+L A + L+ +H +++
Sbjct: 251 WNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVL 310
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ F L + + L+D+Y KCGSL A IF+ + +KD +I WS +I+ ++G A
Sbjct: 311 K--FDQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKD--VISWSTMISGLAQNGFSVEA 366
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIID 204
++LF+ M SG +PN +T VL ACSH GLV+EG F+ M + I P +HY+C++D
Sbjct: 367 LNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLD 426
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
LLGRAG+LD+ LI M +P+ W LL AC + NV+L AA+ +L+ ++ G
Sbjct: 427 LLGRAGKLDEMVKLIHEMTCEPDVVTWRTLLDACRAQRNVDLATYAAKEILKLDQQDAGA 486
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
Y+LL+N+YA RW DV +VR ++ G+RK P S +EV
Sbjct: 487 YVLLSNIYANSKRWDDVAEVRRTMSARGIRKEPGCSWIEV 526
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 120/225 (53%), Gaps = 7/225 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K N + +F K ++ W ++S + + L A++L M+ + V P+ T
Sbjct: 128 MYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYT 187
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+S+L A L DLKQ +H ++++G + V S L+D YSK G L A +F
Sbjct: 188 FSSVLRACERLCDLKQ---VHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFR--E 242
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D ++W++IIAA+ +H G+ A++L+ M + G +Q T TSVL AC+ L++ G
Sbjct: 243 MVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELG 302
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+ +LK ++++ ++D+ + G L+DA + M +K
Sbjct: 303 RQVHVHVLKFDQDLILNN--ALLDMYCKCGSLEDAKFIFSRMAVK 345
>Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:26047948-26049264 | 20130731
Length = 438
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 180/341 (52%), Gaps = 42/341 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y C N ++++F +T + WN++++ + A+ LF +M DV P+ +T
Sbjct: 96 FYGHCVSLNHAHQLFDETPHRNDVIWNSIIALYSRVQNITTAVNLFNEM---DVPPNEST 152
Query: 61 FNSLLPAYAI--------------------------------------LADLKQAMNIHC 82
FN ++ A ++ +A L IH
Sbjct: 153 FNPIIAALSLSNQNNASFKAISFYRRMTGLKLKPGLITLLALVRASVSIAALNLIKEIHG 212
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG 142
Y +R+ +++S L++ Y +CG L + +F + DKD+++WS +I+A HG
Sbjct: 213 YAMRNDIDSHPQLSSGLIEAYGRCGCLMDSRTVFKNMRGCDKDVVVWSNLISACALHGEA 272
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTC 201
+ A+ F EM SGVKP+ +TF +VL ACSH GL DE L F M + + + P +HY+C
Sbjct: 273 KEALEFFQEMEVSGVKPDGITFLAVLKACSHAGLDDEALCFFMKMHRDYGVEPNSEHYSC 332
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPEN 261
++D+L RAGRL +AY +I+ MP+K WGALLGAC ++ + L E+A + E+EP+N
Sbjct: 333 LVDVLSRAGRLYEAYEVIKGMPVKVTAKAWGALLGACTNYGELGLAEIAGKALAEVEPDN 392
Query: 262 TGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
NY+LLA +YA+VGR + +++ + E G++ S V
Sbjct: 393 AANYVLLAKIYASVGRREEADRMIREMKEKGVKTTSGTSWV 433
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 128/296 (43%), Gaps = 55/296 (18%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM---LVEDVQPDNATFNSLLPA 67
S F + +R + ++ ++ S REA+ +F M L + P F +L +
Sbjct: 3 SSSFFYSPNHQRLLSFTKQITTHVNQSRHREALSIFHHMHSSLFMFLDPH--VFTLVLKS 60
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
L A +IH +LI+S FL ++S L++ Y C SL +AH +F+ P ++
Sbjct: 61 CTSLHLPYLATSIHSHLIKSSFLTNNPFLSSSLLNFYGHCVSLNHAHQLFDETPHRND-- 118
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD---EGLSL 183
+IW++IIA Y + + AV+LFNEM V PN+ TF ++ A S + + +S
Sbjct: 119 VIWNSIIALYSRVQNITTAVNLFNEM---DVPPNESTFNPIIAALSLSNQNNASFKAISF 175
Query: 184 FQFM----LKHHIIPL---------------------------VDHY----TCIIDLLGR 208
++ M LK +I L +D + + +I+ GR
Sbjct: 176 YRRMTGLKLKPGLITLLALVRASVSIAALNLIKEIHGYAMRNDIDSHPQLSSGLIEAYGR 235
Query: 209 AGRLDDAYNLIRTMP-IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
G L D+ + + M + VW L+ AC H GE F E E +G
Sbjct: 236 CGCLMDSRTVFKNMRGCDKDVVVWSNLISACALH-----GEAKEALEFFQEMEVSG 286
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 183/316 (57%), Gaps = 14/316 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIH------NSLAR-----EAIQLFKQM 49
+Y KC C + ++F + WNA+++G ++L+ EA+ LF ++
Sbjct: 328 LYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKL 387
Query: 50 LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 109
++PD TF+S+L + + L+Q IH I++GFL + V S ++++Y+KCGS+
Sbjct: 388 NRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSI 447
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
A +F + + + +I+W+ +I + +HG + A++LF +M G++PN VTF VL
Sbjct: 448 ERASKVF--LEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLS 505
Query: 170 ACSHVGLVDEGLSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
AC G+V+E + F+ M K + I P++DHY C++D+L R G++ +A++LI+ M K +
Sbjct: 506 ACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASE 565
Query: 229 AVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMV 288
+W L+ C+S N+ELG AA L+P++T Y LL N Y + GR+ DV +V +++
Sbjct: 566 FIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIM 625
Query: 289 NEVGLRKLPAQSLVEV 304
E + +L S + +
Sbjct: 626 REEKIGELKDWSWISI 641
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNA 59
+YAKC + ++F +++ W ++ G++ NS+ + AI LF++ML+ + P N
Sbjct: 122 VYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNY 181
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC-GSLGYAHHIFNI 118
T L A L LK +H Y+I+ + + + L +Y+KC G L F
Sbjct: 182 TLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRR 241
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV--QSGVKPNQVTFTSVLHACSHVGL 176
I K+KD+I W+A I+A G+ G V +F EM+ + V+PN+ T TS L C V
Sbjct: 242 I--KEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKC 299
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
++ G+ + K + ++ L + G + +A L + M N W A++
Sbjct: 300 LELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN-DVNLVTWNAMIA 358
Query: 237 A 237
Sbjct: 359 G 359
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
+EA L K+ + + D++ + LL IHC+++++G ++S L
Sbjct: 63 QEAFSLAKE---SNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFL 119
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVK 158
V +Y+KCG + A +F+ + ++ + W+ ++ Y ++ + A+ LF EM + S
Sbjct: 120 VTVYAKCGRMECAQQVFD--HMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECY 177
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR-----AGRLD 213
P+ T L+AC+ + + G L +++K+H VD T I + L G+L+
Sbjct: 178 PSNYTLAIALNACTSLHSLKLGEQLHAYIIKYH----VDFDTSIGNALCSLYTKCGGKLE 233
Query: 214 DAYNLIRTMPIKPNHAVWGALLGAC 238
R + K + W A + AC
Sbjct: 234 VGLTAFRRIKEK-DVISWTAAISAC 257
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 170/305 (55%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MY KC + +F +K A W+A++ + E + L +M E + + +
Sbjct: 16 MYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEES 75
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T ++L A L IH L+R+ + V + L+D+Y K G L +F
Sbjct: 76 TLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFK-- 133
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ +K+ ++ +I+ HG G+ A+ +F+EM++ G+ P+ V + V ACSH GLV+E
Sbjct: 134 NMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEE 193
Query: 180 GLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GL F+ M +H I P V HY C++DLLGR G L +AY LI++M IKPN +W +LL AC
Sbjct: 194 GLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSAC 253
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H N+E+G++AA F L N+G+Y++LAN+YA +W DV K+R + E L + P
Sbjct: 254 KVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPG 313
Query: 299 QSLVE 303
SL+E
Sbjct: 314 FSLIE 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 95 VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
V + L+++Y KCG + A +FN + +K + WSAII A+ + L +M
Sbjct: 9 VQNSLINMYGKCGEIKNACDVFN--GMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSS 66
Query: 155 SG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
G + + T +VL AC+H+G D G + +L++ V T +ID+ ++G L+
Sbjct: 67 EGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLE 126
Query: 214 DAYNLIRTMPIKPNHA 229
+ + M K ++
Sbjct: 127 KGLRVFKNMSEKNRYS 142
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 18/304 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y++C +Y++F + S + W A+++GF ++LF++M +++P+ T
Sbjct: 152 LYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFT 211
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ SLL A L +HC +I+ GF L V + L+ +YSKCG + A +IF
Sbjct: 212 YTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFE--N 269
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ KD++ W+++I M GV P+ VTF +L +C H GLV EG
Sbjct: 270 MVSKDVVTWNSMIVG----------------MRIMGVNPDAVTFLGILSSCRHGGLVKEG 313
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M+ H + P +DHY+CI+DLLGRAG L +A + I+ MP+ PN +WG+LL +
Sbjct: 314 QVYFSSMVDHGLQPELDHYSCIVDLLGRAGLLLEALDFIQNMPVCPNAVIWGSLLSSSRL 373
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H NV +G AA LEP + + LANLYA+VG W V +VR ++ + GL+ P S
Sbjct: 374 HGNVWIGIRAAESRLSLEPGCSSTLLQLANLYASVGWWNQVARVRQLMKDKGLKPNPGCS 433
Query: 301 LVEV 304
+EV
Sbjct: 434 WIEV 437
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
D + HC IR GF+ + V S L+ +YS+CG LG A+ +F+ + ++++ W+AI
Sbjct: 123 DFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFD--EMSVRNVVSWTAI 180
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
IA + + +M + LF M +KPN T+TS+L AC G + G + +++
Sbjct: 181 IAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGF 240
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ +I + + G + DA + M + + W +++
Sbjct: 241 HCYLHVENALIAMYSKCGVIVDALYIFENM-VSKDVVTWNSMI 282
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 176/303 (58%), Gaps = 3/303 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
YA C + K+F +T K W A+L+G N EA+++F +M+ +V P+ ++
Sbjct: 271 FYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESS 330
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S L + L DL++ IH I+ G + + LV +YSKCG +G A +F I
Sbjct: 331 FTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGIC 390
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+++ W+++I +HG G A+ LF EM++ GV+ +++T T +L ACS G++ +
Sbjct: 391 --EKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKA 448
Query: 181 LSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F + + + L V+HY C++D+LGR G +++A L +MP++ N VW LL AC
Sbjct: 449 RCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACR 508
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H ++++ E AA+ FE+EP+ + Y+LL+NLYA+ RW +V ++R + G+ K P
Sbjct: 509 VHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGS 568
Query: 300 SLV 302
S +
Sbjct: 569 SWI 571
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 117/242 (48%), Gaps = 8/242 (3%)
Query: 5 CNCG--NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNATF 61
CN G N + ++F + + W +++ G N + +A+ FK M+ V + T
Sbjct: 169 CNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTL 228
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE--VASILVDIYSKCGSLGYAHHIFNII 119
L A A + D + IHC + + GF L+ V++ LV Y+ C +G A +F
Sbjct: 229 VCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGET 288
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
K++++W+A++ G + A+ +F+EM++ V PN+ +FTS L++C + +++
Sbjct: 289 VC--KNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEK 346
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G + +K + V ++ + + G + DA + + + + N W +++ C
Sbjct: 347 GRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGI-CEKNVVSWNSVIVGCA 405
Query: 240 SH 241
H
Sbjct: 406 QH 407
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F K + + +L + HN+ EAI LF Q + D ++NS++ A I D
Sbjct: 52 VFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQ--IPSNTKDTISWNSVIKASIICND 109
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
A+ + + + + + ++ + G + A FN +P DKD+ W+A++
Sbjct: 110 FVTAVKLFDEMPQRNSIS----WTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMV 165
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
Y +G A+ LF +M V +++TS++ G + L F+ M+ +
Sbjct: 166 NGYCNNGRVNDALRLFCQMPSRDV----ISWTSIIVGLDRNGKSYQALFFFKNMVGFSGV 221
Query: 194 PLVDHYTCIIDLLGRAGRLDDAY 216
+ T ++ L A ++ D Y
Sbjct: 222 GISS--TTLVCGLSAAAKILDFY 242
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 167/305 (54%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC + ++++F + +L F N EAIQ+F +M+ ++ D
Sbjct: 295 LYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANM 354
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++L + + L IH +I+ F V + LV++YSKCG L + +F
Sbjct: 355 VSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVF--YQ 412
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K+ + W+++IAA+ +HG G A+ + EM GV P VTF S+LHACSH GLV++G
Sbjct: 413 MTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKG 472
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ L + M H I P +HY C++D+LGRAG L++A I +P VW ALLGAC
Sbjct: 473 MELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACS 532
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H + E+G+ AA F P + Y+L+AN+Y++ G W++ + E+G+ K
Sbjct: 533 IHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGI 592
Query: 300 SLVEV 304
S +E+
Sbjct: 593 SWIEI 597
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 8/243 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPDNAT 60
Y KC C + K+F + ++ W AV+SG N ++++LF QM V P+ T
Sbjct: 194 YFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLT 253
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ S L A + L L+ IH L + G L + S L+D+YSKCGSL A IF
Sbjct: 254 YLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFE--S 311
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ D + + I+ A+ ++G E A+ +F +MV G++ + ++VL + G
Sbjct: 312 AEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALG 371
Query: 181 LSLFQFMLKHHII--PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+ ++K + P V + ++++ + G L D+ + M K N W +++ A
Sbjct: 372 KQIHSLIIKKNFCENPFVGN--GLVNMYSKCGDLSDSLLVFYQMTQK-NSVSWNSVIAAF 428
Query: 239 VSH 241
H
Sbjct: 429 ARH 431
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 21/234 (8%)
Query: 1 MYAKC----NCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--- 53
MY+KC N GN+ F + T WN ++SGF+ N + + FKQM +
Sbjct: 86 MYSKCGEFRNAGNV----FDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVC 141
Query: 54 VQPDNATFNSLLPA-----YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 108
+ D AT ++L I + Q IH + GF + V + L+ Y KC
Sbjct: 142 CRFDKATLTTMLSGCDGLRLGISTSVTQM--IHGLVFVGGFEREITVGNALITSYFKCEC 199
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSV 167
+F+ + +++++ W+A+I+ ++ E ++ LF +M G V PN +T+ S
Sbjct: 200 FSQGRKVFD--EMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSS 257
Query: 168 LHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
L ACS + ++ +G + + K + + + ++DL + G LD A+ + +
Sbjct: 258 LMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFES 311
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 165/262 (62%), Gaps = 3/262 (1%)
Query: 19 SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAM 78
+K+ A WN+++SGF+ + +A+Q+F+ M + P++ T S+LP A L K+
Sbjct: 487 TKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVK 546
Query: 79 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGK 138
IHC+ +R + L V+++L+D Y+K G+L Y+ +IFN L KD + W++++++Y
Sbjct: 547 EIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFN--ELSWKDAVSWNSMLSSYVL 604
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VD 197
HG E A+ LF +M + G++PN+ TF S+L A H G+VDEG S+F + K +++ ++
Sbjct: 605 HGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGME 664
Query: 198 HYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 257
HY+ ++ LLGR+G+L +A + I++MPI+PN +VWGALL AC H N + +A + E
Sbjct: 665 HYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHRNFGVAVLAGKRMLEF 724
Query: 258 EPENTGNYILLANLYAAVGRWR 279
EP N LL+ Y+ G++
Sbjct: 725 EPGNNITRHLLSQAYSLCGKFE 746
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 113/222 (50%), Gaps = 2/222 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC ++ K+F + S + W+A++ G N E + LF M+ + V PD
Sbjct: 126 MYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFL 185
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A DL+ IH +IR G + + + ++ +Y+KCG + A IF+
Sbjct: 186 LPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDC-- 243
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ ++D + W+A+I+ + ++G A F+ M + GV+P+ VT+ ++ + +G D
Sbjct: 244 MDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLA 303
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+ L + M I P V +T +I + GR+ A +L++ M
Sbjct: 304 IDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W +++SGF A+ L K+M + V+ +N T S A A L L + IH +
Sbjct: 322 WTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAV 381
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ + + V + L+D+Y KCG L A HIF++ + ++D+ W++II Y + G A
Sbjct: 382 KMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDM--MSERDVYSWNSIIGGYFQAGFCGKA 439
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIID 204
LF +M +S PN +T+ ++ G D+ L LF+ + K + +I
Sbjct: 440 HELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLIS 499
Query: 205 LLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVS 240
++G+ D A + R M I PN ++L C +
Sbjct: 500 GFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCAN 538
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 95 VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
V + LV +Y+KCG LG A +FN + + +++ WSA+I ++ V LF M++
Sbjct: 119 VETKLVSMYAKCGLLGMARKVFNEMSV--RNLFTWSAMIGGCSRNKSWGEVVGLFYAMMR 176
Query: 155 SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDD 214
GV P++ VL AC ++ G + +++ + I+ + + G +D
Sbjct: 177 DGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDC 236
Query: 215 AYNLIRTMPIKPNHAVWGALL-GACVSHENVELGE 248
A + M + + A W A++ G C +N E+G+
Sbjct: 237 AKKIFDCMDERDSVA-WNAMISGFC---QNGEIGQ 267
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 2 YAKCNCGNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
YAK GNL Y +F + S K WN++LS ++ + + A+ LF QM + +QP+
Sbjct: 571 YAKS--GNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRG 628
Query: 60 TFNSLLPAYAILADLKQAMNIHC-----YLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
TF S+L AY + + ++ YL+R G +E S +V + + G L A
Sbjct: 629 TFASILLAYGHAGMVDEGKSVFSCITKDYLVRQG----MEHYSAMVYLLGRSGKLAEALD 684
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+P+ + + +W A++ A H + +AV M++
Sbjct: 685 FIQSMPI-EPNSSVWGALLTACRIHRNFGVAVLAGKRMLE 723
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 164/282 (58%), Gaps = 13/282 (4%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N+++SG I N REA FK M + V+P+ S+L + +DL +HC +R
Sbjct: 229 NSLVSGCIKNGRYREA---FKVMSL--VKPNAVALTSVLVCCSEESDLLTGKQVHCVAVR 283
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
GF + ++ ++L+D+Y+KCG + A +F+ I KD+I W+ +I YG++G G AV
Sbjct: 284 QGFTFETQLCNVLLDMYAKCGKILQAWSVFDGI--FQKDVISWTCMIDGYGRNGCGYEAV 341
Query: 147 SLFNEMVQSG--VKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYTCII 203
LF +M++ G V PN VTF SVL AC H GLV+EG F M K+ I P +HY C I
Sbjct: 342 ELFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPEHYACFI 401
Query: 204 DLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 260
D+LGRAG++++ ++ + M P VW +LL AC ++ E GE AA+ +LEP
Sbjct: 402 DILGRAGKIEEVWSAYQNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAAKSLLQLEPN 461
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
N +L +N YAA+GRW V ++R M+ E GL K S +
Sbjct: 462 KASNIVLASNFYAAIGRWDCVGELRSMMREKGLVKEAGNSWI 503
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 141/331 (42%), Gaps = 66/331 (19%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++ N S K+F + + WN +LS F+ EAI++ ++M E+V+ T
Sbjct: 102 MYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFT 161
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII- 119
S+L A L L+ +H ++ G + +++ L+D YS S+G HH N+
Sbjct: 162 LCSVLKCCASLKALEFGRQVHGLVVAMGRDL-VVLSTALIDFYS---SVGCVHHALNVFY 217
Query: 120 PLKD-KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH----- 173
LK KD +I +++++ K+G A V S VKPN V TSVL CS
Sbjct: 218 GLKGWKDDMIHNSLVSGCIKNGRYREAFK-----VMSLVKPNAVALTSVLVCCSEESDLL 272
Query: 174 ------------------------------VGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
G + + S+F + + +I +TC+I
Sbjct: 273 TGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGIFQKDVIS----WTCMI 328
Query: 204 DLLGRAGRLDDAYNLIRTM-----PIKPNHAVWGALLGACVSHENVELGE-----VAARW 253
D GR G +A L M + PN + ++L AC VE G+ + ++
Sbjct: 329 DGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKY 388
Query: 254 TFELEPENTGNYILLANLYAAVGRWRDVEKV 284
+ EPE+ +I + +GR +E+V
Sbjct: 389 GIDPEPEHYACFIDI------LGRAGKIEEV 413
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL-PAYAILADLKQAMNIHCYLI 85
N++++ +I A LF + + D+ TF LL P+ L +H +I
Sbjct: 31 NSLITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLLRPSPTSLGK-----QLHSQMI 85
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G + L+D+YS+ GSL + +F+ + +D++ W+ +++ + + G + A
Sbjct: 86 KTGSDSGTVPKTALLDMYSRHGSLNSSLKVFD--EMLHRDVVAWNTLLSCFLRCGKPDEA 143
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+ + EM + V+ ++ T SVL C+ + ++ G + ++ LV T +ID
Sbjct: 144 IRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMG-RDLVVLSTALIDF 202
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
G + A N+ + + + +L+ C+ +
Sbjct: 203 YSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKN 238
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 183/310 (59%), Gaps = 9/310 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + + F + +K W A++SG++ NS +E++ LF+ M + D+ PD + F
Sbjct: 183 YAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIF 242
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A L L+ + IH +L + + + +++ L+D+Y+KCG+L A +F+ +
Sbjct: 243 VSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMN 302
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D ++ W+A+I+ HG G+ A+ LF +M + GVKP+ +TF +V ACS+ G+ EG
Sbjct: 303 MRD--VVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEG 360
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA----VWGALL 235
L L M ++I+P +HY C++DLL RAG ++A +IR + N + W A L
Sbjct: 361 LMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFL 420
Query: 236 GACVSHENVELGEVAARWTFELEPE-NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
AC +H +L E+AA +L+ ++G Y+LL+NLYAA G+ D +VRDM+ G
Sbjct: 421 SACCNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTN 480
Query: 295 KLPAQSLVEV 304
K P S VE+
Sbjct: 481 KAPGCSSVEI 490
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 131/276 (47%), Gaps = 34/276 (12%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + +N ++ F+ N+ + A+Q+F +ML +++PDN T +L A
Sbjct: 62 RVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFH 121
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP------------ 120
D IH Y + G ++ + V + L+ +Y G + A ++F+ IP
Sbjct: 122 DCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMIS 181
Query: 121 -----------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVT 163
+KD IW A+I+ Y ++ + ++ LF M + + P++
Sbjct: 182 GYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESI 241
Query: 164 FTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTM 222
F S+L AC+H+G ++ G+ + Q + + ++PL V T ++D+ + G L+ A L +M
Sbjct: 242 FVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSM 301
Query: 223 PIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
++ + W A++ H + G+ A + +++E
Sbjct: 302 NMR-DVVCWNAMISGMAMHGD---GKGALKLFYDME 333
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC L+ ++F + + WNA++SG + + A++LF M V+PD+ T
Sbjct: 284 MYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDIT 343
Query: 61 FNSLLP-------AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
F ++ AY L L + +++ + +S E LVD+ S+ G A
Sbjct: 344 FIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKS------EHYGCLVDLLSRAGLFEEAM 397
Query: 114 HIFNIIPLK---DKDIIIWSAIIAAYGKHGHGEMA 145
+ I ++ + W A ++A HG ++A
Sbjct: 398 VMIRKITNSWNGSEETLAWRAFLSACCNHGETQLA 432
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 174/306 (56%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP--DN 58
MYAKC ++ +F + + W+ ++ G++ E+++LFK+ LVE+ ++
Sbjct: 165 MYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVND 224
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T +S+L L+ IH ++ F VAS L+ +YSKCG + A+ +F
Sbjct: 225 FTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEE 284
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLV 177
+ +++ + +W+A++ A +H H + LF++M G+K N +TF VL+ACSH GLV
Sbjct: 285 VTVRN--LGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLV 342
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++G F+ M + I P HY+ ++DLLGRAG+L+DA LI MP++P +VWGALL
Sbjct: 343 EKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTG 402
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H N +L A EL ++G +++L+N YAA GRW + K R M+ + G++K
Sbjct: 403 CRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKET 462
Query: 298 AQSLVE 303
S VE
Sbjct: 463 GLSWVE 468
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y+K + S ++F + K W++V+S F N L ++ F+ ML + V PD+
Sbjct: 64 FYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHI 123
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S + IL+ L A +HC+ +++ + + V S ++D+Y+KCG + YAH++F+ +P
Sbjct: 124 FPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMP 183
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV--QSGVKPNQVTFTSVLHACSHVGLVD 178
++++ WS +I Y + G + ++ LF + + N T +SVL C L+
Sbjct: 184 Y--RNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQ 241
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G + K + +I L + G +++AY++ + ++ N +W A+L AC
Sbjct: 242 MGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWNAMLIAC 300
Query: 239 VSHENVELGEVAARWTFEL 257
H + + TFEL
Sbjct: 301 AQHAHTDK-------TFEL 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 55 QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
QP + L + L + + +H ++I+ G ++ L++ YSK +
Sbjct: 17 QPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQ 76
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
IF+ P K WS++I+++ ++ ++++ F M++ GV P+ F S +C +
Sbjct: 77 IFHDSP--HKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGIL 134
Query: 175 GLVDEGLSLFQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
+ L F LK +H+ V + +ID+ + G + A+N+ MP + N W
Sbjct: 135 SSLPVAKMLHCFALKTAYHLDIFVG--SSVIDMYAKCGDICYAHNVFDEMPYR-NVVSWS 191
Query: 233 ALLGACVS-HENVELGEVAARWTFELEPENTGNYILLANLYAAVG 276
L+ V E+ E + R+ E E E ++ L + L G
Sbjct: 192 GLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGG 236
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 183/305 (60%), Gaps = 6/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C C + +Y++F W+A++SG+ ++A+ F+++ ++ + D+
Sbjct: 249 MYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVL 308
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++L + +A++ IH Y++R G ++V+S L+D+YSKCG L +F I
Sbjct: 309 IATVLASITQMANVLPGCEIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRI-- 366
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +++II ++++I AYG HG A ++F+EM+Q G+ P++ TF+++L AC H GLV +G
Sbjct: 367 MLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDG 426
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LF M + +I +HY ++ LLG G L++AYNL +++P + A+ GALL C
Sbjct: 427 RELFWRMKDEFNIKARPEHYVYMVKLLGGVGELEEAYNLTQSLPKPVDKAILGALLSCCD 486
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRD-MVNEVGLRKLPA 298
S+ N EL E A+ F+ P + ++L+N+YA GRW DV+K+RD MV G +K+
Sbjct: 487 SYGNSELAETVAQQIFKSNPADNVYRVMLSNIYAGDGRWDDVKKLRDKMVG--GQKKMRG 544
Query: 299 QSLVE 303
S +E
Sbjct: 545 VSWIE 549
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 3/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA N N ++ +F KTS + WN+++ F AI LF+ MLV+D++PDN T
Sbjct: 47 LYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKARRFSNAISLFRTMLVDDIRPDNYT 106
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ + A A D +H + G S LV YSK G + A +F+ I
Sbjct: 107 YACAIRACADSFDFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVFDGIV 166
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D+++W+++I+AYG G E+ + +F+ M +G KP+ T +L + L+ G
Sbjct: 167 --EPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIG 224
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
L K + + ++ + R +D AY + + P+ W AL+
Sbjct: 225 QELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGI-FNPDLVTWSALI 278
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 171/305 (56%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KCN S K+F + W + + G + N A+ +F++M+ + P++ T
Sbjct: 247 MYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFT 306
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+S+L A + LA L+ IH ++ G V + L+ +Y KCG++ A +F
Sbjct: 307 FSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFE--S 364
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L + D++ + +I AY ++G G A+ LF M + G KPN VTF S+L AC++ GLV+EG
Sbjct: 365 LTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEG 424
Query: 181 LSLFQFMLKHHIIPLV-DHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F + +H I L DHYTC+IDLLGRA R ++A LI P+ W LL AC
Sbjct: 425 CQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACK 483
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H VE+ E + + P + G +ILL N+YA+ G+W +V +++ ++ L+K PA
Sbjct: 484 IHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAM 543
Query: 300 SLVEV 304
S V++
Sbjct: 544 SWVDI 548
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 153/321 (47%), Gaps = 39/321 (12%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC+ + K+F + + WN+++S + +EAI+L+ ML E V PD TF
Sbjct: 45 YIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTF 104
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++ A++ + ++ H + GF + VA+ +VD+Y+K G + A +F+ +
Sbjct: 105 SAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVL 164
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
DKD+++++A+I Y + G A+ +F +MV S +KPN+ T SVL +C ++G + G
Sbjct: 165 --DKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNG 222
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRA------------------------------- 209
+ ++K + +V T ++ + +
Sbjct: 223 KLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN 282
Query: 210 GRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYI 266
GR + A ++ R M I PNH + ++L AC S +E GE T +L + GN
Sbjct: 283 GREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVD--GNKY 340
Query: 267 LLANLYAAVGRWRDVEKVRDM 287
+ A L G+ +VEK R +
Sbjct: 341 VDAALIHLYGKCGNVEKARSV 361
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ SL+ + L ++H ++++SG L+ L+D Y KC + A +F+ +P
Sbjct: 4 YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ I+ W+++I+++ G + A+ L++ M+ GV P+ TF+++ A S +G+ EG
Sbjct: 63 --NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 181 LSLFQFMLKHHIIPLVDHY--------TCIIDLLGRAGRLDDA 215
K H + +V + T I+D+ + G++ DA
Sbjct: 121 -------QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDA 156
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 168/266 (63%), Gaps = 3/266 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F +K W ++SGF+ N EA+ + +M E +P+ T +S+L A A L
Sbjct: 241 ELFDTLKEKDDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLV 300
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L + + IH ++++ Y L + + L+ Y+KCG++ A+ IF + + + +++ +++
Sbjct: 301 ALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIF--VDVVELNVVSNNSV 358
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHH 191
I + ++G GE A++++ M ++PN+VTF +VL AC+H GL++EG +LF M ++
Sbjct: 359 INGFTQNGFGEEALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMKSRYR 418
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
P DHY C++DLLGRAG LD+A +LIR++ +KP+ VWGALL A +H ++L ++AA
Sbjct: 419 NEPDADHYACMVDLLGRAGLLDEANDLIRSITVKPHSGVWGALLAASSAHLRLDLAKLAA 478
Query: 252 RWTFELEPENTGNYILLANLYAAVGR 277
+ +LEP N Y++L+NLY+A G+
Sbjct: 479 QHITKLEPANATPYVVLSNLYSAAGQ 504
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 5 CNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATF 61
C G + Y K+F + ++ W+A++ G++ L F +M E V+ ++ T
Sbjct: 115 CRDGRIGYARKLFDRMPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTM 174
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLY---------RLEVASI-----LVDIYSKCG 107
++ +K M IH + R GF + R+ + ++ + G
Sbjct: 175 TIMIKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDG 234
Query: 108 SLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSV 167
+G +F+ LK+KD +W+ +I+ + + E A+ + M + G KPN +T +SV
Sbjct: 235 RMGKPVELFDT--LKEKDDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSV 292
Query: 168 LHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
L A + + ++EGL + +LK ++ + +I + G + DAY +
Sbjct: 293 LAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIF 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 31/253 (12%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLARE---AIQLFKQMLVEDVQPDNATFNSLLPAYA 69
K+F K ++ TA +NA++SG+I AR+ A +L++++ E P N+L+ Y
Sbjct: 27 KLFDKMPERTTATYNAMISGYILK--ARKFHLAEELYREVPCEFRDP--VCSNALMNGYL 82
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC--GSLGYAHHIFNIIPLKDKDII 127
+ + +A+ + + S + +V S + C G +GYA +F+ +P +++++
Sbjct: 83 KIGETNEALRVFENVGES----KRDVVSWSAVVVGLCRDGRIGYARKLFDRMP--ERNVV 136
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSL--- 183
WSA+I Y + G E F EM + G V+ N T T ++ C + G V +G+ +
Sbjct: 137 SWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIHGL 196
Query: 184 -----FQFMLKHHII----PLVD--HYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
F+F+ + + P D +T +I GR+ L T+ K + VW
Sbjct: 197 VSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEKDDF-VWT 255
Query: 233 ALLGACVSHENVE 245
L+ VS+E E
Sbjct: 256 VLISGFVSNEEYE 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC +YK+F+ + N+V++GF N EA+ ++K+M E ++P+ TF
Sbjct: 331 YAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGEEALNMYKRMQNESLEPNRVTF 390
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFN 117
++L A +++ N+ + YR E + +VD+ + G L A+ +
Sbjct: 391 LAVLSACTHAGLIEEGRNLFDTMKSR---YRNEPDADHYACMVDLLGRAGLLDEANDLIR 447
Query: 118 IIPLKDKDIIIWSAIIAAYGKH 139
I +K +W A++AA H
Sbjct: 448 SITVKPHS-GVWGALLAASSAH 468
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 174/298 (58%), Gaps = 5/298 (1%)
Query: 10 LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
L+ ++F + ++ W+ +++G++ EA+ F +ML +V+P+ T S L A +
Sbjct: 195 LAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACS 254
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L L Q IH Y+ R + + L+D+Y+KCG + A +F+ +K K + W
Sbjct: 255 NLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRK-VWPW 313
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+A+I + HG E A+++F +M V PN+VTF ++L+ACSH +V EG S F+ M
Sbjct: 314 NAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMAS 373
Query: 190 HH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
+ I P ++HY C++DLL R+G L D+ +I +MP+ P+ A+WGALL AC ++++E G
Sbjct: 374 DYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGY 433
Query: 249 VAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVG--LRKLPAQSLVEV 304
R E++P + G +LL N+Y+ GRW + VR+ NE+ +K+P S +E+
Sbjct: 434 RIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREK-NEINSDRKKIPGFSSIEL 490
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 107 GSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM-AVSLFNEMVQ-SGVKPNQVTF 164
SL YAH +F+ IP D+ I++ +I ++ H + ++++F +++ SG PN+ +F
Sbjct: 57 ASLTYAHKLFDQIP--QPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSF 114
Query: 165 TSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPI 224
AC + V EG +F +K + V +I + G+ GR++DA N+ + +
Sbjct: 115 VFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDS-AV 173
Query: 225 KPNHAVWGALLGACVSHENVELGE 248
+ W ++GA V N+ L +
Sbjct: 174 DRDFYSWNTMIGAYVGSGNMVLAK 197
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 169/303 (55%), Gaps = 7/303 (2%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
CNCG + + ++F K WN++L G N+ EA+ F M DV+ D +F
Sbjct: 372 CNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFA 431
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
S++ A AI + L+ + I G + + LVD Y KCG + +F+ +
Sbjct: 432 SVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKT 491
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
D+ + W+ ++ Y +G+G A++LFNEM SGV+P+ +TFT +L AC H GLV+EG
Sbjct: 492 DE--VSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRD 549
Query: 183 LFQFMLKHH--IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
LF+ M KH I P ++HY+C++DL R G +A LI MP + + +W ++L CVS
Sbjct: 550 LFRTM-KHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVS 608
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N +G++AA +L+P N+G YI L+N+ A W +VR+++ ++K+P S
Sbjct: 609 HGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDWEGSAEVRELMRNKNVQKIPGCS 668
Query: 301 LVE 303
++
Sbjct: 669 WMD 671
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 36/263 (13%)
Query: 6 NCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
N G +S K+F + WN+++SG++ N EA+ LF +M V D + +
Sbjct: 241 NAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVAN 300
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK------------------ 105
+L + L +++ +H + + G + + VAS L+D YSK
Sbjct: 301 ILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYD 360
Query: 106 -------------CGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
CG + A +FN +P +K +I W++I+ ++ A+ F+ M
Sbjct: 361 AILLNTMITVYCNCGRVEDAKEVFNSMP--NKTLISWNSILVGLTQNACPSEALDTFSMM 418
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
+ VK ++ +F SV+ AC+ ++ G LF + + T ++D + G +
Sbjct: 419 NKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLV 478
Query: 213 DDAYNLIRTMPIKPNHAVWGALL 235
+ + M IK + W +L
Sbjct: 479 EMGRKVFDGM-IKTDEVSWNTML 500
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC + K+F K WN +L G+ N EA+ LF +M V+P TF
Sbjct: 472 YCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITF 531
Query: 62 NSLLPAYAILADLKQAMNI-----HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
+L A +++ ++ H Y I G +E S +VD++++ G G A ++
Sbjct: 532 TGILSACDHCGLVEEGRDLFRTMKHDYDINPG----IEHYSCMVDLFARVGCFGEAMYLI 587
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGH---GEMA 145
+P + D +W +++ HG+ G+MA
Sbjct: 588 EEMPFQ-ADANMWLSVLRGCVSHGNKTIGKMA 618
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 11/184 (5%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM---LVEDVQPDNATFNSLLPAYAI 70
+F K WN+++ G+ + R ++ LFK+M +E V D +++ A A
Sbjct: 114 LFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACAD 173
Query: 71 LADLKQAMNIHCYLIRSGFLYRLE--VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
L L +H + GF + + + S +V+ Y KCG L A + + K+ D
Sbjct: 174 LFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFV--KEVDDFS 231
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
SA+++ Y G A +F+ + V P V + S++ G E L+LF M
Sbjct: 232 LSALVSGYANAGRMSDARKVFD----NKVDPCSVLWNSIISGYVSNGEEMEALALFNKMR 287
Query: 189 KHHI 192
++ +
Sbjct: 288 RNGV 291
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNI-HCYLIRSGFLYRLEVASIL 99
+A +LF +M QP+ ++N+L+ A+ L +++ + H ++ + + L V+++
Sbjct: 48 DASKLFDEM----PQPNPFSWNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTL- 102
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM---VQSG 156
SK G L A +FN +P+K+ ++W+++I Y +HG+ ++ LF EM
Sbjct: 103 ----SKSGDLQQAQALFNAMPMKNP--LVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLET 156
Query: 157 VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC--IIDLLGRAGRLDD 214
V + ++V AC+ + +D G + + D C I++ G+ G LD
Sbjct: 157 VHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDS 216
Query: 215 AYNLI 219
A ++
Sbjct: 217 AARVV 221
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 172/305 (56%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KCN S K+F + W + + G + N A+ +F++M+ + P++ T
Sbjct: 247 MYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFT 306
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+L A + LA L+ IH ++ G V + L+ +Y KCG++ A +F+
Sbjct: 307 LSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFD--S 364
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L + DI+ + +I AY ++G G A+ LF + + G++PN VTF S+L AC++ GLV+EG
Sbjct: 365 LTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEG 424
Query: 181 LSLFQFMLKHHIIPLV-DHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F + +H I L DHYTC+IDLLGRA R ++A LI P+ W LL AC
Sbjct: 425 CQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACK 483
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H VE+ E + + P + G +ILL N+YA+ G+W +V +++ ++ L+K PA
Sbjct: 484 IHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAM 543
Query: 300 SLVEV 304
S V++
Sbjct: 544 SWVDI 548
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 39/325 (12%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC+ + K+F + + WN+++S + +EAI+L+ ML E V PD TF
Sbjct: 45 YIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTF 104
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++ A++ + ++ H + GF + VA+ +VD+Y+K G + A +F+ +
Sbjct: 105 SAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVL 164
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
DKD+++++A+I Y +HG A+ +F +MV S +KPN+ T SVL +C ++G + G
Sbjct: 165 --DKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNG 222
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRA------------------------------- 209
+ ++K+ + +V T ++ + +
Sbjct: 223 KLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN 282
Query: 210 GRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYI 266
GR + A ++ R M I PNH ++L AC S +E GE T +L + GN
Sbjct: 283 GREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVD--GNKF 340
Query: 267 LLANLYAAVGRWRDVEKVRDMVNEV 291
+ A L G+ +VEK R + + +
Sbjct: 341 VDAALIHLYGKCGNVEKARSVFDSL 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 83/163 (50%), Gaps = 18/163 (11%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ SL+ L ++H ++++SG L+ L+D Y KC + A +F+ +P
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ I+ W+++I+++ G + A+ L++ M+ GV P+ TF+++ A S +G+ EG
Sbjct: 63 --NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 181 LSLFQFMLKHHIIPLVDHY--------TCIIDLLGRAGRLDDA 215
K H + +V + T I+D+ + G++ DA
Sbjct: 121 -------QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDA 156
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 168/310 (54%), Gaps = 9/310 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y C + K+F + + WN+V++ + N + I F +M +PD +
Sbjct: 156 YGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETSM 215
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
LL A L L +H LI G + + + + LVD+Y K G+LGYA +F +
Sbjct: 216 VLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVVFE--RM 273
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLF---NEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ +++ WSA+I +HG E A+ LF N+ + + PN VT+ VL ACSH G+VD
Sbjct: 274 EKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVD 333
Query: 179 EGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG F+ M H I P++ HY ++D+LGRAG L +AY I++MP P+ VW LL A
Sbjct: 334 EGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLLSA 393
Query: 238 CVSHENVE---LGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
C H+ + +G+ + E+EP+ GN +++AN+YA VG W VR ++ + GL+
Sbjct: 394 CTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYAEVGNWEKAANVRRVMRDGGLK 453
Query: 295 KLPAQSLVEV 304
K+ +S V++
Sbjct: 454 KMAGESCVDL 463
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++ G+ + E+I +FK+M V+P+ T+ + + A+ L + +H L+
Sbjct: 79 WNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCEGKQVHADLV 138
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ G + V + +++ Y C + YA +F+ + + + I+ W++++ A ++
Sbjct: 139 KFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCV--RTIVSWNSVMTACVENVWLSDG 196
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+ F +M +P++ + +L C+ +G + G + ++ ++ V T ++D+
Sbjct: 197 IGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDM 256
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
G++G L A + M K N W A++ H E
Sbjct: 257 YGKSGALGYARVVFERME-KRNVWTWSAMIMGLAQHGFAE 295
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
I W+ +I Y ++ +F +M ++GVKPN++T+ + +C+ ++ EG +
Sbjct: 77 ISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCEGKQVHAD 136
Query: 187 MLKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
++K + D Y C +I+ G ++ A + M ++ W +++ ACV ENV
Sbjct: 137 LVKFGLDS--DVYVCNNMINFYGCCKKIVYARKVFDEMCVR-TIVSWNSVMTACV--ENV 191
Query: 245 ELGEVAARWTFEL-----EPENTGNYILLANL----YAAVGRW 278
L + + F++ EP+ T +LL+ Y ++GRW
Sbjct: 192 WLSD-GIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRW 233
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 172/306 (56%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA C L ++F + ++ W ++ G+ + +A+ +F+QM V P+ T
Sbjct: 153 VYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVT 212
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ L A A ++ + I + R+G+ + + + L+D+Y KCG + +F
Sbjct: 213 MVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVF--CD 270
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+K++ + +I E A+ FN M GV+ ++VT +VL ACSH GLV++G
Sbjct: 271 MKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKG 330
Query: 181 LSLFQFML--KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+F ++ K+ +P V HY C++DLL RAG+L +A+++I+ MP +P A+WG+LL
Sbjct: 331 RFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLLLGS 390
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
S +++E E AA ELEP NT Y+ L+NLYA GRW DVE++R M+ E GL K
Sbjct: 391 KSRDDLEFSEFAATKLVELEPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLTKDLG 450
Query: 299 QSLVEV 304
S VEV
Sbjct: 451 CSSVEV 456
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 101/200 (50%), Gaps = 2/200 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N+++ F H+ + + L+ M + P+N TF L + + D Q+ ++ ++I
Sbjct: 77 FNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQSQCVYTHVI 136
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ G++ + V + L+D+Y+ G L +F+ +P +D++ W+ +I Y G A
Sbjct: 137 KLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMP--QRDVVSWTVMIMGYRNGGKYNDA 194
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+ +F +M GV PN+VT + L AC+ ++ G+ + + ++ V T +ID+
Sbjct: 195 LLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDM 254
Query: 206 LGRAGRLDDAYNLIRTMPIK 225
+ GR+++ + M K
Sbjct: 255 YVKCGRVEEGLKVFCDMKEK 274
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 164/303 (54%), Gaps = 3/303 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC + +F ++K W+ ++S + S A+EA M E +P+
Sbjct: 397 LYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFA 456
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L +A L+ +H Y + G + V S L+ +YS+ G+L A IF+ I
Sbjct: 457 LASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSI- 515
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K+ DI+ W+A+I Y +HG+ + A+SLF + G+ P+ VTF +L AC+H GLVD G
Sbjct: 516 -KNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLG 574
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
++ M ++ I P +HY CIIDLL RAGRL +A +++R MP + VW LL AC
Sbjct: 575 FYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACR 634
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H +++ AA L P + G +I LAN+Y+A GR + VR ++ G+ K P
Sbjct: 635 DHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGW 694
Query: 300 SLV 302
S +
Sbjct: 695 SWI 697
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 121/246 (49%), Gaps = 13/246 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + ++F K S W ++ ++ A+ FK+M DV P+ T
Sbjct: 296 MYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYT 355
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A A LA K IH + +R G + L V++ ++ +YSKCG L A +F+
Sbjct: 356 FASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFD--G 413
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ KDII WS II+ Y + H + A + + M + G KPN+ SVL C + L++ G
Sbjct: 414 MTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPG 473
Query: 181 LSLFQFMLKHHIIPLVDHYT----CIIDLLGRAGRLDDAYNLIRTMPIKPNHAV-WGALL 235
+ + L I L DH T +I + R+G L +A + + IK N V W A++
Sbjct: 474 KQVHAYAL---CIGL-DHETMVHSALISMYSRSGNLQEASKIFDS--IKNNDIVSWTAMI 527
Query: 236 GACVSH 241
H
Sbjct: 528 NGYAEH 533
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 2/215 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K +F + + W AV+ G +H + + + F +M V D+ T
Sbjct: 195 MYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHT 254
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F L A A L IH I+ GF V + L +YSKC Y +F
Sbjct: 255 FAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFG--K 312
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D++ W+ +I Y + G E A+ F M +S V PN+ TF SV+ AC+++ + G
Sbjct: 313 MSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWG 372
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
+ L+ ++ + II L + G L +A
Sbjct: 373 EQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEA 407
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 37/270 (13%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAILA 72
MF K S + W +++G+++ + + EA+ LF M V+ +Q D + L A A+
Sbjct: 106 MFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGM 165
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
++ +H + ++SG + + V+S LVD+Y K G +F + ++++ W+A+
Sbjct: 166 NVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFE--NMTTRNVVSWTAV 223
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I G +S F+EM +S V + TF L A + GL+ G ++ +K
Sbjct: 224 IVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGF 283
Query: 193 -------------------------------IPLVDHYTCIIDL---LGRAGRLDDAYNL 218
P V +T +I +G R DA+
Sbjct: 284 NETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKR 343
Query: 219 IRTMPIKPNHAVWGALLGACVSHENVELGE 248
+R + PN + +++ AC + + GE
Sbjct: 344 MRKSDVSPNEYTFASVISACANLAITKWGE 373
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 166/293 (56%), Gaps = 6/293 (2%)
Query: 16 MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLK 75
M S K + W ++ G++ N L EAI LF +M+ + P N+T+ L A +A L
Sbjct: 421 MPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLD 480
Query: 76 QAMNIHCYLIRSGFLYRLEV--ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+H +++ + Y +V + L+ +Y+KCG + A+ IF+ + +DK I W+++I
Sbjct: 481 LGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDK--ISWNSMI 538
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
HG A++++ M++ GV P+ VTF VL AC+H G VD+G LF ML + +
Sbjct: 539 MGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYAL 598
Query: 194 -PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC-VSHENVELGEVAA 251
P ++HY II++LGRAGR+ DA + +P++PNH +WGAL+G C +S + ++ AA
Sbjct: 599 QPGLEHYVSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAA 658
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
EL+P N ++ L N+YAA R + +R + G+RK P S + V
Sbjct: 659 TRLLELDPLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCSWILV 711
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 40/253 (15%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNAT 60
Y + N ++++F +K W A++ GF N REA+ LF M+ + D +P+ T
Sbjct: 237 YCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEET 296
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFL---YRLEVASILVDIYSKCGSL-------- 109
F SL+ A A + +H +I + + Y + LV +YS CG +
Sbjct: 297 FVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFE 356
Query: 110 ----------------GY--------AHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
GY A +F+ +P+++K I W+ +I+ Y G A
Sbjct: 357 GDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNK--IAWTCMISGYLSAGQVLKA 414
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+LF++M S + + +T +++ L+ E ++LF M+ P+ Y +
Sbjct: 415 SNLFDDMPDS--DKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGA 472
Query: 206 LGRAGRLDDAYNL 218
+G LD + L
Sbjct: 473 VGSVAYLDLGWQL 485
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 22/241 (9%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + +F + +NA+LS ++ + + R+A + F M +V ++
Sbjct: 82 YAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNV----VSW 137
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L YA L + A + + + + L+ + G L A +F+ P
Sbjct: 138 TAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLI----RNGDLEEARKVFDDTP- 192
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
DK+++ W+A+I Y ++G + A LF+++ V +T+TS++ VG V+E
Sbjct: 193 -DKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNV----ITWTSMISGYCRVGDVNEAF 247
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM----PIKPNHAVWGALLGA 237
LFQ M + +++ +T +I G +A L M KPN + +L+ A
Sbjct: 248 RLFQIMPEKNVVS----WTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYA 303
Query: 238 C 238
C
Sbjct: 304 C 304
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
D+ +FNS++ Y L +A + + IR+ + + ++ Y G + A ++
Sbjct: 363 DDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAW-----TCMISGYLSAGQVLKASNL 417
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F+ +P DKD I W+ +I Y ++ A++LF EM+ G P T+ + A V
Sbjct: 418 FDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVA 477
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
+D G L LK D Y +I + + G ++DAY + M + + W +
Sbjct: 478 YLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCR-DKISWNS 536
Query: 234 LLGACVSH 241
++ H
Sbjct: 537 MIMGLSDH 544
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 74 LKQAMNIHCYLIRSGFL---------YRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD- 123
L Q M C+ +RS L Y + + +L Y G L A I + P +
Sbjct: 11 LVQLMRCSCFSLRSFSLKPRSHFPLHYECDESQLLH--YLTNGFLHEARTILHSFPSGNI 68
Query: 124 -KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
++ W++++ Y KHG+ E A +LF+ M N VT+ ++L A G+ +
Sbjct: 69 HSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHR----NIVTYNAMLSAYLQSGMTRQAKR 124
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
F M + +++ +T ++ G +DDA + MP + N W +++ + +
Sbjct: 125 FFDDMPERNVVS----WTAMLSGYAGLGWIDDARKVFDEMPER-NVVSWNSMVVGLIRNG 179
Query: 243 NVELGEVAARWTFELEPE-NTGNYILLANLYAAVGRWRDVEKVRDMV 288
++E AR F+ P+ N ++ + Y GR D + + D +
Sbjct: 180 DLE----EARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQI 222
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 154/264 (58%), Gaps = 3/264 (1%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
A+++ M + ++ D + S L A A L ++ +HCY ++SGF V++ LV
Sbjct: 505 ALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVH 564
Query: 102 IYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
+YSKCGS+ A+ F I + D W+ +I+ + +G A+S F++M +GVKP+
Sbjct: 565 LYSKCGSIHDANRAFKDIS--EPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDS 622
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIR 220
+T S++ ACSH GL++ GL F M K +HI P +DHY C++DLLGR GRL++A +I
Sbjct: 623 ITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIE 682
Query: 221 TMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRD 280
M KP+ + LL AC H NV LGE AR EL+P + Y+LLANLY G
Sbjct: 683 KMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDF 742
Query: 281 VEKVRDMVNEVGLRKLPAQSLVEV 304
EK R ++ E GLR+ P Q +E+
Sbjct: 743 GEKTRRLMRERGLRRSPGQCWMEI 766
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 115/228 (50%), Gaps = 4/228 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + K+ T + W ++SGF N REAI +F+ M + + P+N T
Sbjct: 262 MYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFT 321
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY-AHHIFNII 119
++SLL A + + L H +I G L + + LVD+Y KC + A +F I
Sbjct: 322 YSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREI 381
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+++ W+++IA + + E + LF EM +GV+PN T +++L ACS +
Sbjct: 382 T--SPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVP 438
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPN 227
+ L ++K + + ++D G +D+A+++I TM ++ +
Sbjct: 439 TMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDS 486
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 40/274 (14%)
Query: 2 YAKCNCGNLSYKMFMKTSKK--RTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
Y KC C ++ + K W +LS + N EA +++ +M+ V P+
Sbjct: 160 YTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEF 219
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF LL A + L +H +LI G L + + +VD+YSKC + A + N+
Sbjct: 220 TFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLT 279
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH------ 173
P + D+ +W+ +I+ + ++ A+S+F +M SG+ PN T++S+L+A S
Sbjct: 280 P--EYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDL 337
Query: 174 ----------VGLVDE---GLSLFQFMLK-HHII------------PLVDHYTCIIDLLG 207
VGL D+ G +L +K HI P V +T +I
Sbjct: 338 GEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFA 397
Query: 208 RAGRLDDAYNLIRTMP---IKPNHAVWGALLGAC 238
RL+D++ L M ++PN A+LGAC
Sbjct: 398 EK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGAC 430
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 112/238 (47%), Gaps = 5/238 (2%)
Query: 1 MYAKCN-CGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MY KC+ + K+F + + W ++++GF L ++ QLF +M V+P++
Sbjct: 363 MYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSF 421
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +++L A + L M +H ++I++ + VA+ LVD Y+ G + A + +
Sbjct: 422 TMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTM 481
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
L+D I ++ + A + GH MA+ + M G+K ++ + S L A + +G ++
Sbjct: 482 NLRDS--ITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMET 539
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G L + +K ++ L + G + DA + + +P+ W L+
Sbjct: 540 GKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDIS-EPDAFSWNGLISG 596
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 15/237 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAK + + +F + + W +LS +A+QLF M+ P+ T
Sbjct: 58 LYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFT 117
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY-AHHIFNII 119
+S L + L + ++ M IHC ++ G V + LV+ Y+KCG A + +++
Sbjct: 118 LSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLV 177
Query: 120 PLKD-KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
KD D++ W+ ++++ ++G A ++ +M++SGV PN+ TF +L A S
Sbjct: 178 --KDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSF---- 231
Query: 179 EGLSLFQFMLKHHIIPLVD----HYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
GLS + + H I+ + T ++D+ + R+ DA I+ + P + V+
Sbjct: 232 LGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDA---IKVSNLTPEYDVY 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
LK+ + IH +I+ G + L + + L+ +Y+K + A H+F+ +P ++D++ W+ I+
Sbjct: 30 LKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMP--NRDVVSWTTIL 87
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
+++ K H A+ LF+ M+ SG PN+ T +S L +C +G + G+ + +K +
Sbjct: 88 SSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLE 147
Query: 194 PLVDHYTCIIDLLGRAGRLD-DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
T +++ + G +A+ L+ + + W +L + V EN + GE
Sbjct: 148 MNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLV--ENGKWGEAFEI 205
Query: 253 WTFELEPENTGNYILLANLYAAVGRW 278
+ +E N L AV +
Sbjct: 206 YVKMIESGVYPNEFTFVKLLGAVSSF 231
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 170/306 (55%), Gaps = 17/306 (5%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
++ ++F + ++ W A++SG+ H +EA++LF ++ ++PD + L A
Sbjct: 306 KVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSAC 365
Query: 69 AILADLKQAMNIH---------CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
A L L+ IH C + R GF S +VD+Y+KCGS+ A +F
Sbjct: 366 ARLGALELGRRIHRQYAGENWTCSINR-GF------TSAVVDMYAKCGSIDIALDVFRKT 418
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
K ++++II+ HG GE A +LF EM G+KP+ +TF +VL AC H GLVD
Sbjct: 419 SDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDF 478
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G LF+ M + + P ++HY C++DLLGRAG LD+A+ LI MP K N +W ALL AC
Sbjct: 479 GKKLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSAC 538
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H +V L VA+ EL+ ++ Y++L+N+ + + + +R ++ VG++K P
Sbjct: 539 KVHGDVALARVASYELVELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPG 598
Query: 299 QSLVEV 304
S VE+
Sbjct: 599 WSYVEM 604
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 137/301 (45%), Gaps = 48/301 (15%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C G++ +YK+F ++ + +N +++GF ++F +M V+PD TF
Sbjct: 164 CGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFV 223
Query: 63 SLLPAYAILADLKQAMNIHCYLIR--SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LL ++L D + +H + R F + + + LVD+Y+KCG L A + +++
Sbjct: 224 ALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVK 283
Query: 121 -------------------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLF 149
+ ++D++ W+A+I+ Y G + A+ LF
Sbjct: 284 PGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELF 343
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF-QFMLKHHIIPLVDHYT-CIIDLLG 207
++ G+KP++V + L AC+ +G ++ G + Q+ ++ + +T ++D+
Sbjct: 344 VKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYA 403
Query: 208 RAGRLDDAYNLIR-TMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE------LEPE 260
+ G +D A ++ R T K ++ +++ H E A+ FE L+P+
Sbjct: 404 KCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEY----AKNLFEEMGLLGLKPD 459
Query: 261 N 261
N
Sbjct: 460 N 460
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 138/291 (47%), Gaps = 19/291 (6%)
Query: 14 MFMKTSKKRTAPWNAVLSGF--IHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA-- 69
+F + + WNA++ + IH S + LFK ML V PD+ TF LL A A
Sbjct: 71 LFTQITNPDIFLWNAIIKAYSQIH-SPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANV 129
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
+++ + +HC+++R+GF + V + L++ Y G + A+ +F+ + +D + +
Sbjct: 130 LISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFV--RDCVSF 187
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS-----HVGLVDEGLSLF 184
+ +I + + G +F EM V+P++ TF ++L CS +G GL
Sbjct: 188 NTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYR 247
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM-PIKPNHAVWGALLGACVSHEN 243
+ + LV+ ++D+ + GRL A ++ + P K A W +L+ A
Sbjct: 248 ELGCFGGNVLLVNK---LVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGE 304
Query: 244 VELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
V +VA R ++ + ++ + + Y+ G +++ ++ + +G++
Sbjct: 305 V---KVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMK 352
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTS--KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYAKC +++ +F KTS KK T +N+++SG H+ A LF++M + ++PDN
Sbjct: 401 MYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDN 460
Query: 59 ATFNSLLPA--YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
TF ++L A + L D + + + + G +E +VD+ + G L AH +
Sbjct: 461 ITFVAVLSACGHCGLVDFGKKLFESMFTVY-GVSPEMEHYGCMVDLLGRAGHLDEAHRLI 519
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+P K + +IW A+++A HG +A E+V+
Sbjct: 520 LKMPFK-ANAVIWRALLSACKVHGDVALARVASYELVE 556
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 54/273 (19%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP-LKDKDIIIWSAI 132
++QA I+ ++I +G L +++ L Y+ S HH + + + DI +W+AI
Sbjct: 27 MQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPDIFLWNAI 86
Query: 133 IAAYGK-HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
I AY + H + SLF M+ S V P+ TF +L AC++V + F F + H
Sbjct: 87 IKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLI---SAPQFGFQVHCH 143
Query: 192 II------------PLVDHYT-------------------CI-----IDLLGRAGRLDDA 215
++ L++ Y C+ I+ R G +
Sbjct: 144 VLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGC 203
Query: 216 YNL---IRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYIL---LA 269
+ + +R + ++P+ + ALL C E+ +G + GN +L L
Sbjct: 204 FRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLV 263
Query: 270 NLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
++YA GR E V +V P +S+V
Sbjct: 264 DMYAKCGRLVMAETVLSVVK-------PGKSVV 289
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 156/274 (56%), Gaps = 3/274 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + ++ W +++G+ L REA++LF +M+ + PDN S+L A A L
Sbjct: 200 ELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLG 259
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+L+Q +H Y+ R+G + + LVD+Y+KCG + A F +KD+ W+A+
Sbjct: 260 ELEQGRFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFE--SCTNKDVFTWNAM 317
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HH 191
+ + HG G + + F+ MV G+KP+ VTF VL CSH GLV E +F M +
Sbjct: 318 LVGFAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYG 377
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+ HY C+ D+L RAG ++++ LI+ MP + WG LLG C H NVE+ + AA
Sbjct: 378 VAREGKHYGCMADMLARAGLIEESRELIKGMPNGGDVFAWGGLLGGCRIHGNVEIAKQAA 437
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVR 285
+ E++PE+ G Y ++AN+YA +W D+ K+R
Sbjct: 438 QQVMEIKPEDGGVYSVMANIYANTEQWDDLVKIR 471
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 44/284 (15%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAR--EAIQLFKQMLVEDVQPDNATFNSLLPAYAIL 71
+F T +N ++ IH L+ A+++F + + D TF +L A + L
Sbjct: 69 LFNSIPNPTTFTFNTLIR--IHTLLSSPLSALKIFLSLRRLFLTLDFHTFPLILKASSQL 126
Query: 72 ADLKQAMNIHCYLIRSGFL------------------------------YRLEVA-SILV 100
L A ++H + + GFL YR V+ ++++
Sbjct: 127 HSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMI 186
Query: 101 DIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPN 160
D + K L A +F+ +P +++ + W +IA Y + AV LFNEM+ P+
Sbjct: 187 DGFVKNFKLDRARELFDEMPQRNE--VTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPD 244
Query: 161 QVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNL 218
+ SVL AC+ +G +++G + ++ ++ I VD Y T ++DL + G ++ A
Sbjct: 245 NIALVSVLSACAQLGELEQGRFVHDYITRNGI--RVDSYLTTGLVDLYAKCGCVEIARET 302
Query: 219 IRTMPIKPNHAVWGALL-GACVSHENVELGEVAARWTFE-LEPE 260
+ K + W A+L G + + + L E +R E ++P+
Sbjct: 303 FESCTNK-DVFTWNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPD 345
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC C ++ + F + K WNA+L GF + ++ F +M+ E ++PD T
Sbjct: 289 LYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPDGVT 348
Query: 61 FNSLL----------PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLG 110
F +L A + +++ + R G Y + D+ ++ G +
Sbjct: 349 FLGVLVGCSHAGLVCEARKVFDEMETVYGV----AREGKHY-----GCMADMLARAGLIE 399
Query: 111 YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+ + +P D+ W ++ HG+ E+A ++++ +KP SV+
Sbjct: 400 ESRELIKGMP-NGGDVFAWGGLLGGCRIHGNVEIAKQAAQQVME--IKPEDGGVYSVM 454
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 168/289 (58%), Gaps = 3/289 (1%)
Query: 17 KTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQ 76
K K R W++++SG++ N + ++ F+ M+ E + D T +++ A A L+
Sbjct: 342 KEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEF 401
Query: 77 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAY 136
IH Y+ + G V S L+D+YSK GSL A IF I K+ ++++W+++I+
Sbjct: 402 GKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQI--KEPNVVLWTSMISGC 459
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPL 195
HG G+ A+SLF M+ G+ PN+VTF VL+ACSHVGL++EG F+ M +HI P
Sbjct: 460 ALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPE 519
Query: 196 VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTF 255
V+HYT +++L GRAG L +A N I I +VW + L +C H+N +G+ +
Sbjct: 520 VEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLL 579
Query: 256 ELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ P + YILL+N+ ++ +W + VR ++ + G++K P QS V++
Sbjct: 580 QSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQL 628
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 122/258 (47%), Gaps = 38/258 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAI-QLFKQMLVEDVQPDNA 59
+Y K + + ++K+F + + K T W ++SGF + + E + LF++M + P+
Sbjct: 76 LYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQY 135
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +S+L + +++ IH +++R+G + + + ++D+Y KC YA F +
Sbjct: 136 TLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFEL- 194
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNE---------------------------- 151
+ +KD++ W+ +I AY + G E ++ +F
Sbjct: 195 -MIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQ 253
Query: 152 ---MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLL 206
MV G + + VTF+ L S + LV+ G L +L + D Y + ++++
Sbjct: 254 LYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNS--DGYIRSSLVEMY 311
Query: 207 GRAGRLDDAYNLIRTMPI 224
G+ GR+D A +++ +P+
Sbjct: 312 GKCGRMDKASTILKDVPL 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 19/247 (7%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
S +MF K WN ++ G I R A++ M+ + TF+ L +
Sbjct: 219 SLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSS 278
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK-------- 122
L+ ++ +H ++ G + S LV++Y KCG + A I +PL
Sbjct: 279 LSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFG 338
Query: 123 ------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
++ WS++++ Y +G E + F MV + + T +++ AC++ G+
Sbjct: 339 VTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGI 398
Query: 177 VDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
++ G + ++ K I +D Y + +ID+ ++G LDDA + + +PN +W ++
Sbjct: 399 LEFGKQIHAYIQK--IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSM 455
Query: 235 LGACVSH 241
+ C H
Sbjct: 456 ISGCALH 462
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
+H + + G L L A+ L+ +Y K +L +AH +F+ I K+ W+ +I+ + +
Sbjct: 54 LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQT--WTILISGFARA 111
Query: 140 -GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH 198
G E+ SLF EM G PNQ T +SVL CS + G + ++L++ + V
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
I+DL + + A + M I+ + W ++GA + +VE
Sbjct: 172 ENSILDLYLKCKEFEYAESFFELM-IEKDVVSWNIMIGAYLREGDVE 217
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C N + K+F + W+A++ G+ + EA+ LF +M + + D
Sbjct: 362 MYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVI 421
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++LPA+A + L +H Y +++ + + L++ Y+KCG + A +FN
Sbjct: 422 VINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEK 481
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KDI+ W+++I AY HG L+N++ S VKP+ VTF +L AC + GLVD+G
Sbjct: 482 SSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKG 541
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F+ M+ + P +H C++DLLGRAG++D+A +I T + + V+G LL AC
Sbjct: 542 KEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACK 601
Query: 240 SHE-NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H + E+AA ++EPEN NY+LL+N++AA G+W K+R + + GL+K P
Sbjct: 602 MHGLETDFAELAAEKLIKMEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPG 661
Query: 299 QSLV 302
S V
Sbjct: 662 CSWV 665
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 147/327 (44%), Gaps = 45/327 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + + MF K +K WN ++S + + +E+++L M+ ++PD T
Sbjct: 261 MYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFT 320
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ + L ++ +H +IR+G Y++ V + LVD+YS C L A IF +I
Sbjct: 321 AIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLI- 379
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+ ++ WSA+I Y H + A+SLF EM SG K + V ++L A + +G +
Sbjct: 380 -KDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYV 438
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA------------------------- 215
L + LK ++ L T +++ + G ++ A
Sbjct: 439 GYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYS 498
Query: 216 -----------YNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL---EPEN 261
YN I+ +KP+H + +L ACV+ V+ G+ + ++ +P
Sbjct: 499 NHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSK 558
Query: 262 TGNYILLANLYAAVGRWRDVEKVRDMV 288
N A + +GR +++ R ++
Sbjct: 559 EHN----ACMVDLLGRAGKIDEARKII 581
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 107/221 (48%), Gaps = 9/221 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++ + E+ +LF +M E+VQP++ T +LL A LK +H ++
Sbjct: 185 WNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVV 244
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
S L V + L+ +Y+K SL A +F +P +KD+++W+ +I+ Y G + +
Sbjct: 245 ASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMP--EKDVVVWNIMISVYSGSGCPKES 302
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+ L MV+SG++P+ T + + + + ++ G L ++++ V + ++D+
Sbjct: 303 LELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDM 362
Query: 206 LGRAGRLDDA---YNLIRTMPIKPNHAVWGALLGACVSHEN 243
L+ A + LI+ + W A++ H+N
Sbjct: 363 YSTCADLNSARKIFGLIKDRTV----VSWSAMIKGYAMHDN 399
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 168/285 (58%), Gaps = 24/285 (8%)
Query: 21 KRTAPWNAVLSGFI-----HNSLAREAIQLFKQMLV---EDVQPDNATFNSLLPAYAILA 72
+ WNA+++G+ + A + LFK+ML+ +V+P++ T LL A + L
Sbjct: 4 RNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAASQLG 63
Query: 73 DLKQAMNIHCYLIRSGFLYRLE----VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
++ + +H + ++ L ++E + + LVD+YSKCG L A +F +K ++++
Sbjct: 64 MVEIGVCLHGFAVK--VLCKVEDDVFIGTGLVDMYSKCGCLESALSVFR--RMKWRNVLT 119
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+A+ HG GE A+ + EM GVKPN+ TFTS+L AC H GLV+EGL LF+ M
Sbjct: 120 WTAMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDME 179
Query: 189 -KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
K ++P + HY C++DLLGR G L++AY+ I MPI P+ +W +LL AC H +V +G
Sbjct: 180 GKFGVVPWIQHYGCVVDLLGRNGNLNEAYDFIMEMPISPDTLIWRSLLSACRIHGDVVMG 239
Query: 248 EVAARWTFELEPEN-------TGNYILLANLYAAVGRWRDVEKVR 285
E R+ + + ++ + +Y+ L+N+YA+ GRW VE VR
Sbjct: 240 EKVGRFLLKFKEKSSEELAHKSEDYVALSNVYASAGRWDVVEVVR 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 43/232 (18%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC C + +F + + W A+ +G + EA+++ +M + V+P+ T
Sbjct: 95 MYSKCGCLESALSVFRRMKWRNVLTWTAMTTGLAIHGRGEEALKILYEMGSDGVKPNETT 154
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F SLL A H L+ G L+R D+ K G + + H
Sbjct: 155 FTSLLSACC-----------HAGLVEEGLQLFR--------DMEGKFGVVPWIQH----- 190
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ ++ G++G+ A EM + P+ + + S+L AC G V
Sbjct: 191 ---------YGCVVDLLGRNGNLNEAYDFIMEM---PISPDTLIWRSLLSACRIHGDVVM 238
Query: 180 GLSLFQFMLK------HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
G + +F+LK + + Y + ++ AGR D + + M +K
Sbjct: 239 GEKVGRFLLKFKEKSSEELAHKSEDYVALSNVYASAGRWDVVEVVRKKMKVK 290
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 164/293 (55%), Gaps = 1/293 (0%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNATFNSLLPAYAIL 71
++F ++ + W A+ SG+ + E +LF++ + E++ PD +L A A
Sbjct: 348 RLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQ 407
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
A L IH Y++R ++ S +VD+YSKCG++ YA F ++ +D+D+I+++
Sbjct: 408 ATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNV 467
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+IA Y HG A+ LF++M++ VKP+ VTF ++L AC H GLV++G F M +
Sbjct: 468 MIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISMEDYS 527
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
++P ++HY C++D+ GRA +L+ A +R +PI+ + +WGA L AC + N L A
Sbjct: 528 VLPEINHYACMVDMYGRANQLEKALEFMRKIPIQIDATIWGAFLNACQINNNTSLVNKAE 587
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++ + + LAN+YA+ G W ++ ++R + +KL S + V
Sbjct: 588 EELLKIGADTGSRCVQLANVYASEGNWNEMGRIRKKMRVKEAKKLTGCSWIYV 640
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 140/345 (40%), Gaps = 77/345 (22%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T WN +++G+ N +A+ LF +M V+ D T S+L + L LK +H
Sbjct: 226 TVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHA 285
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK-------------------- 122
+++++ + ++S +VD+Y KCG++ YA ++ I +K
Sbjct: 286 WVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMK 345
Query: 123 ---------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACS 172
+++ ++W+A+ + Y K E LF + V + + P+ + VL AC+
Sbjct: 346 AQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACA 405
Query: 173 HVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL-------------------- 212
+ G + ++L+ + + ++D+ + G +
Sbjct: 406 TQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILY 465
Query: 213 -------------DDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEV--AARWT 254
+ A L M +KP+ + ALL AC VE GE+ +
Sbjct: 466 NVMIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISMED 525
Query: 255 FELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ + PE +Y + ++Y GR +EK + +RK+P Q
Sbjct: 526 YSVLPE-INHYACMVDMY---GRANQLEKALEF-----MRKIPIQ 561
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 38/294 (12%)
Query: 25 PWNAVLSGFI-HNSLAREAIQLFKQMLV--EDVQPDNATFNSLLPAYAILADLKQAMNIH 81
+N++LS ++ + EA+ LF +M + + D + +++ A L + +H
Sbjct: 91 SYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCYGKQMH 150
Query: 82 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN----IIPLKDK------------- 124
Y++++ +S L+++YSKCG A + + ++ L K
Sbjct: 151 SYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNAMVAACCREGEM 210
Query: 125 --------------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
D + W+ +IA Y ++G+ + A++LF +M + GV+ ++ T SVL
Sbjct: 211 DMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSV 270
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
CS + + G + ++LK+ + I+DL + G + A + + IK AV
Sbjct: 271 CSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAV 330
Query: 231 WGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKV 284
++G E ++ A R L N+ + L + YA + +V K+
Sbjct: 331 SSLIVGYSSQGEMMK----AQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKL 380
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 177/293 (60%), Gaps = 6/293 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNS-LAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+F KT K +NA++ G+ S A +++++ M + +P+ +TF S++ A ++LA
Sbjct: 230 IFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLA 289
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ + L+++ F +++ S L+D+YSKCG + A +F+ + +K++ W+++
Sbjct: 290 AFEIGEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFD--HMLEKNVFSWTSM 347
Query: 133 IAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKH 190
I YGK+G + A+ LF +M ++ + PN VTF S L AC+H GLV+ G +FQ M ++
Sbjct: 348 IDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEY 407
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
+ P ++HY C++DLLGRAG L+ A+ + MP +PN VW ALL +C H N+E+ ++A
Sbjct: 408 KLKPRMEHYACMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLA 467
Query: 251 ARWTFELEP-ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
A F+L G Y+ L+N A G+W +V ++R+++ E G+ K A S V
Sbjct: 468 ANELFKLNAYGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 123/271 (45%), Gaps = 39/271 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K + + ++F + + +N ++ G++ N E++ LF Q+ V +PD T
Sbjct: 81 LYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFT 140
Query: 61 FNSLLPAY------AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
F+ +L A ++ DL + +H +++ + + L+D Y K G +GY
Sbjct: 141 FSMILKASTNRVSNGMVGDLGRM--VHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRT 198
Query: 115 IFNIIPLK-----------------------------DKDIIIWSAIIAAYGKHGHGEM- 144
+F+++ K DKD+++++A+I Y K M
Sbjct: 199 VFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMR 258
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
++ ++ +M + +PN TF S++ ACS + + G + ++K ++ + +ID
Sbjct: 259 SLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLMKTPFFAVIKLGSALID 318
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + GR+ DA + M ++ N W +++
Sbjct: 319 MYSKCGRVIDAQRVFDHM-LEKNVFSWTSMI 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 53 DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 112
D P + F++ L Y IH +++++GF+ ++ L+ +Y K SL YA
Sbjct: 32 DFIPPSTFFSNTLQHYINSQTPSHGQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYA 91
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
+F+ L D+ + ++ +I Y K+G + ++ LF+++ SG KP+ TF+ +L A +
Sbjct: 92 RQVFD--DLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKAST 149
Query: 173 H 173
+
Sbjct: 150 N 150
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MY+KC + ++F +K W +++ G+ N EA++LFK+M +E + P+
Sbjct: 319 MYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPNFV 378
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNI 118
TF S L A A +++ I + L R+E + +VD+ + G L A
Sbjct: 379 TFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDLLGRAGWLNQAWEFVTR 438
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+P + + +W A++++ HG+ EMA NE+ +
Sbjct: 439 MPER-PNSDVWLALLSSCRIHGNIEMAKLAANELFK 473
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 6/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
+YAKC + + +F+K SK+ W +L + EA+++FKQM+V + +P+ +
Sbjct: 201 LYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNES 260
Query: 60 TFNSLLPAYAILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T ++L A A + L +H Y+ R + + LV++Y KCG + +FN+
Sbjct: 261 TVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNM 320
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ KD+I W +I +G+G+ V +F+ M+ GV P+ VTF +L ACSHVGLV
Sbjct: 321 VV--HKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVS 378
Query: 179 EGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG+ F+ M + I+P + HY C++D+ GRA ++A ++ MP++ +W ALL A
Sbjct: 379 EGMMFFKAMRDSYGIVPQMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQA 438
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C +H N E+ E R + G LL+N+YA+ RW D VR ++ GL+K+
Sbjct: 439 CKTHGNEEMSE-WIRGQIHDKNVGVGTLALLSNIYASSERWDDANNVRKIMRGTGLKKVA 497
Query: 298 AQSLVE 303
S VE
Sbjct: 498 GLSWVE 503
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F W +++SG EAI+ F + +V+P+ T S + A + +
Sbjct: 114 RVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSI---NVKPNALTLVSAISACSSIG 170
Query: 73 DLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+K IH Y ++S + + + +D+Y+KCG A ++F + + +D+I W+
Sbjct: 171 AIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVF--VKMSKRDVISWTT 228
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
++ AY + G AV +F +M+ SG +PN+ T +VL AC+ +G + G + ++ K
Sbjct: 229 LLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEK 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 7/195 (3%)
Query: 44 QLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 103
L QML ++ TF L A + + IH LI+SG ++ + + L+ Y
Sbjct: 44 NLCNQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFY 103
Query: 104 SKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVT 163
+ A +F IP D++ W+++I+ K G A+ F+ + VKPN +T
Sbjct: 104 LSSNDVVSATRVFKSIP--SPDVVSWTSLISGLSKCGFETEAIEAFSSI---NVKPNALT 158
Query: 164 FTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTM 222
S + ACS +G + G ++ + LK +I + Y +DL + G +A N+ M
Sbjct: 159 LVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKM 218
Query: 223 PIKPNHAVWGALLGA 237
K + W LL A
Sbjct: 219 S-KRDVISWTTLLMA 232
>Medtr3g117620.1 | PPR containing plant-like protein | HC |
chr3:55081139-55078984 | 20130731
Length = 493
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 181/303 (59%), Gaps = 13/303 (4%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + + T NA+LSG+ L +A +L ++M + ++ D+ T ++ L A L+
Sbjct: 160 VFDEIPDRNTVCANALLSGYCEFGLWVKAFELIRKMPLLKLKYDHFTLSAALRACTGLSS 219
Query: 74 LKQAMNIHCYLIRSGFLYRLEV--ASILVDIYSKCGSLGYAHHIF-----NIIPLKDKDI 126
++ +H YL+R+ +V S L+++Y KCG + A +F +I + +D+
Sbjct: 220 VEMGRQLHSYLLRTMADIESDVFLQSTLIEMYGKCGMVEKAQLVFKLDGMDIRKERSRDV 279
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ W++++ YGK+GH + + L++EM++ G+KP+ ++F +++ AC H G VD G+ F+
Sbjct: 280 VFWTSMLGVYGKNGHYKEVIDLYSEMLREGIKPDGISFLTIISACGHTGQVDAGVKYFES 339
Query: 187 MLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP-----NHAVWGALLGACVS 240
M + P +HY+C++DLL RAG L+ A+ L+ + ++WGALL ACV
Sbjct: 340 MTNDFKLDPGPEHYSCLVDLLCRAGELNKAWELLNETCHHKGIGNCSVSMWGALLSACVD 399
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
N+ELG++AA+ EL+P+N G ++L+N+YA +G W ++ ++R ++N+ GLRK S
Sbjct: 400 SGNIELGKLAAQRALELDPQNAGICVMLSNVYARLGMWDEIGRLRVLINQRGLRKDVGCS 459
Query: 301 LVE 303
V+
Sbjct: 460 WVQ 462
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 10/239 (4%)
Query: 6 NCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
N L+ F + +N ++S F A+ F M V D S L
Sbjct: 51 NLQTLTNSFFKCMNSTNPLHFNVIISHFCRKGFPFLALTTFSFMHTNHVPLDTYALCSTL 110
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A + D+ IH ++ +SG+ + V S L+D YSK ++ A +F+ IP D++
Sbjct: 111 TASSKFKDVNFGKQIHAHVEKSGWSSSVFVGSALIDFYSKLLNVKDAALVFDEIP--DRN 168
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ +A+++ Y + G A L +M +K + T ++ L AC+ + V+ G L
Sbjct: 169 TVCANALLSGYCEFGLWVKAFELIRKMPLLKLKYDHFTLSAALRACTGLSSVEMGRQLHS 228
Query: 186 FMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIR--TMPIKPNHA----VWGALLG 236
++L+ D + + +I++ G+ G ++ A + + M I+ + W ++LG
Sbjct: 229 YLLRTMADIESDVFLQSTLIEMYGKCGMVEKAQLVFKLDGMDIRKERSRDVVFWTSMLG 287
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 165/297 (55%), Gaps = 6/297 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
+++ K+F K + WN V+ G++ N +A+ +F+ ML V+PD TF S++
Sbjct: 85 DIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGC 144
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
A L A +H ++ + + LVD+Y+KCG + + +F + ++D + +
Sbjct: 145 ARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVFECV-VRD-HVSV 202
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+A+I HGH A +F+ M V P+ VTF +L CSH GLV+ G F+ M
Sbjct: 203 WNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQ 262
Query: 189 KHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
I P + HY ++DLLGRAG L++AY++I+ M ++P+ +W +LL AC H ELG
Sbjct: 263 NRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAMSVEPDVVIWRSLLSACRIHGKKELG 322
Query: 248 EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
E A LE +G+++LL+N+Y + W E+VR M+ + G+RK +S +E+
Sbjct: 323 EFAIANISRLE---SGDFVLLSNMYCSFKNWHGAERVRHMMKKGGVRKKRGKSWIEL 376
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC ++S ++F + + WNA+++G + A +A +F +M VE+V PD+ T
Sbjct: 178 MYAKCGRVDVSKEVFECVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVENVLPDSVT 237
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGS 108
F +L + HC L+ G Y +L+ +VD+ + G
Sbjct: 238 FVGILKGCS-----------HCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGH 286
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
L A+ + + + + D++IW ++++A HG E+
Sbjct: 287 LEEAYSMIKAMSV-EPDVVIWRSLLSACRIHGKKELG 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII- 119
F+ +L + K H +I G+ + + L+ Y+ C AHH+F+ +
Sbjct: 7 FHHILKRCKASKNSKTVAKTHARIIILGYATYPSLVASLISTYAHCQQPNIAHHVFSRVM 66
Query: 120 --------------------------PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
+ +D++ W+ +I Y K+ A+S+F M+
Sbjct: 67 NLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVML 126
Query: 154 QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
++ V+P+ TF SV+ C+ +G + M++ + ++D+ + GR+D
Sbjct: 127 KAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRVD 186
Query: 214 DAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ + + ++ + +VW A++ H
Sbjct: 187 VSKEVFECV-VRDHVSVWNAMINGLAIH 213
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 175/301 (58%), Gaps = 6/301 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C + ++K F+ +K + W++++ N + +A++L K+ML E + + +
Sbjct: 456 MYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYS 515
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ A + L + + +H + I+SG+ + + S ++D+Y+KCG++ + +F+
Sbjct: 516 LPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFD-EQ 574
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
LK + + ++AII+ Y HG + A+ + +++ ++GV PN VTF +++ ACSH G V+E
Sbjct: 575 LKPNE-VTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEET 633
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LF ML K+ I P +HY+C++D GRAGRL++AY +++ + + W LL AC
Sbjct: 634 SHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACR 690
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H N ++GE +A EL P + YILL+N+Y G W + R + ++ ++K P
Sbjct: 691 NHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGN 750
Query: 300 S 300
S
Sbjct: 751 S 751
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 5/240 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + K+F KK W++++SG+ N+ EA+ FK M + V+ D
Sbjct: 252 LYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHV 311
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S L A + DL + +H +I++G VAS+L+++Y+ G LG +F+ I
Sbjct: 312 LSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRID 371
Query: 121 LKDKDIIIWSAIIAAYGKHGHG-EMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVD 178
DKDI+ W+++I A + G G + LF E+ ++ ++ T +VL +C +
Sbjct: 372 --DKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLP 429
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G + ++K + ++ + ++DDA+ + ++ + + W +++G C
Sbjct: 430 AGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDI-VRKDDSSWSSIIGTC 488
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 143/327 (43%), Gaps = 44/327 (13%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+K + + ++K+F K + W ++S + +A ++F M V D +P+ TF
Sbjct: 52 YSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTF 111
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG-SLGYAHHIFNIIP 120
LL A + IH L+R G S LV +Y K G L A +F
Sbjct: 112 AVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVF--YG 169
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVDE 179
L ++D++ W+ +I+ + ++G M LF+EM + G+KP+++TF S+L CS +++E
Sbjct: 170 LLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCS---VLNE 226
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC- 238
+ + + K V + ++DL + + + +M K N VW +++
Sbjct: 227 VMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNF-VWSSMISGYT 285
Query: 239 --------------VSHENVELGEVAARWTF----ELEPENTGNYI-------------- 266
+ + V+L + T E+E NTG +
Sbjct: 286 MNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCF 345
Query: 267 ---LLANLYAAVGRWRDVEKVRDMVNE 290
+L NLYA+ G DVEK+ +++
Sbjct: 346 VASVLLNLYASFGELGDVEKLFSRIDD 372
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L Q IH LI + ++ + +A+ L+ YSK + YAH +F+ +P +++++ W+ +I
Sbjct: 23 LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMP--NRNVVTWTTLI 80
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+++ K+G A +FN M S +PN+ TF +L AC++ L GL + +++
Sbjct: 81 SSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVR 136
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 169/294 (57%), Gaps = 13/294 (4%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED------VQPDNATFNSLLPAYAIL--- 71
+ W +++GF + AI+ F M+ V+P+ AT+ S+L + L
Sbjct: 179 RDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGK 238
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
L +H Y++ G + V + L+++Y K G L Y+ +F ++ +++ + W+A
Sbjct: 239 GALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMVVRE--VCTWNA 296
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KH 190
+I++ +G + A+ LF +M G+KPN +TF +VL AC+ G V EGL LF+ M K
Sbjct: 297 MISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKF 356
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
++P+++HY C++DLLGRAG + +A +IR MP P+ V GA LGAC H +ELGE
Sbjct: 357 QVVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPFPPDKTVLGAFLGACRIHGAIELGEEI 416
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A+ +L+ ++ G Y+LL+++YA RW +R+ + E G+ K+PA S+V +
Sbjct: 417 AK-MLKLQTQHCGQYLLLSSMYAEKERWNHAADLRNEIMEAGIHKIPAFSMVHL 469
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 110/254 (43%), Gaps = 46/254 (18%)
Query: 27 NAVLSGF-IHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
NA++ + +HN + +F ML +V P+ TF LL + + +HC +
Sbjct: 58 NALIRAYNVHNH--NKVFVIFTNMLANNVSPNTHTFPPLLKSSSAFV----VTPLHCQAL 111
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP------------------------- 120
+ G L V + L+ +Y++ + A +F +P
Sbjct: 112 KRGILSDPFVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEGALL 171
Query: 121 ----LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG------VKPNQVTFTSVLHA 170
+ +D++ W+ ++ + G+ A+ F M++ VKPN+ T+ SVL +
Sbjct: 172 VFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSS 231
Query: 171 CSHV---GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPN 227
C+ + G +D G + +++ + V T +I+L G+ G L+ + ++ R M ++
Sbjct: 232 CTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMVVR-E 290
Query: 228 HAVWGALLGACVSH 241
W A++ + S+
Sbjct: 291 VCTWNAMISSLASN 304
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K C N S +F + WNA++S N +EA+ LF++M ++ ++P++ T
Sbjct: 269 LYGKMGCLNYSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSIT 328
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++L A A R GF+ E + + SK F ++P
Sbjct: 329 FVAVLTACA----------------RGGFVS--EGLELFESMSSK----------FQVVP 360
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ + + ++ G+ GH + A + M P++ + L AC G ++ G
Sbjct: 361 VMEH----YGCVVDLLGRAGHIQEAAEIIRNM---PFPPDKTVLGAFLGACRIHGAIELG 413
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 168/295 (56%), Gaps = 9/295 (3%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL 74
F + +K W +++ G+ N A+ LF M Q D+ ++L A A LA L
Sbjct: 293 FQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAIL 352
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
+H +I G L V + L+++Y+KCG + + + + DKD++ W++++
Sbjct: 353 VHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSK--LALRGINDKDLVSWNSMLF 410
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKHHII 193
A+G +G G A+ +F EMV SGV+P++VTFT +L CSH+GL+DEG + FQ M L++ ++
Sbjct: 411 AFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLV 470
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIR----TMPIKPNHAVWGALLGACVSHENVELGEV 249
+DH C++D+LGR G + +A +L R T K N LLGAC +H ++ G
Sbjct: 471 QGMDHVACMVDMLGRGGYVAEAQSLARKYSKTSRDKTNSC--EVLLGACHAHGDLGTGSS 528
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ LEP+ Y+LL+N+Y A G+W++ E VR + + G++K+P S +E+
Sbjct: 529 VGEYVKNLEPKKEVGYVLLSNMYCASGKWKEAEMVRKEMMDQGVKKVPGCSWIEI 583
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 127/279 (45%), Gaps = 37/279 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNATFNSLLPAYAIL 71
K+F + ++ T WNA+L+ + L ++ LF M + D +PDN ++++ + + A
Sbjct: 26 KLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSAAINSCAGA 85
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII------------ 119
+D++ +H ++ SG+ L VA+ L+D+Y KC + A +F+ +
Sbjct: 86 SDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLL 145
Query: 120 -----------------PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
+ +K I W+ IIAA+ + G E + LF EM ++ +P+Q
Sbjct: 146 FAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQW 205
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
TF++++ AC+ G + F++K ++ I+ + DA + +
Sbjct: 206 TFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSG 265
Query: 223 PIKPNHAVWGALLGACVSHENVELGEV-AARWTFELEPE 260
N W A++ A ++++G+ A F+ PE
Sbjct: 266 G-AFNQVSWNAIIDA-----HMKVGDTQKALLAFQQAPE 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 123/263 (46%), Gaps = 40/263 (15%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
++++++F +K WN +++ + LFK+M QPD TF++L+ A
Sbjct: 155 DMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSAC 214
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN----------- 117
+ +HC++I+SG+ +EV + +V Y+K G A +FN
Sbjct: 215 TESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWN 274
Query: 118 ------------------IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
+K+I+ W+++I Y ++G+G++A+SLF +M ++ +
Sbjct: 275 AIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQL 334
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHY----TCIIDLLGRAGRLDD 214
+ + +VLHAC+ + ++ G M+ II L +D Y +I++ + G ++
Sbjct: 335 DDLVAGAVLHACASLAILVHGK-----MVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEG 389
Query: 215 AYNLIRTMPIKPNHAVWGALLGA 237
+ +R + K + W ++L A
Sbjct: 390 SKLALRGINDK-DLVSWNSMLFA 411
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 168/290 (57%), Gaps = 4/290 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F +TS+K T +N ++SG+ N + +A++LF +M +++ P + T +S+L A + LA
Sbjct: 205 LFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAM 264
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L Q +H +I+ G + VAS L+D+YSK G + A + + K+ ++W+++I
Sbjct: 265 LLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLD--QTSKKNTVLWTSMI 322
Query: 134 AAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
Y + G G A+ LF+ ++ + + P+ V FT+VL AC+H G +D+G F M+ ++
Sbjct: 323 MGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYG 382
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+ P +D Y C+IDL R G L A +L+ MP PN +W + L AC + +VELG AA
Sbjct: 383 LSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAA 442
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
++EP N Y+ LA++Y G W + +VR ++ + RK P S+
Sbjct: 443 IQLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKPPGWSM 492
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 121/235 (51%), Gaps = 4/235 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC + K+F + W ++++GF N R+A+ LFK+ML ++P+ T
Sbjct: 91 YAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTL 150
Query: 62 NSLLPA-YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A L+ +H ++I+ GF V S LVD Y+ G + A +FN
Sbjct: 151 TSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFN--E 208
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KD +I++ +I+ Y ++ + E A+ LF EM + + P T +S+L ACS + ++ +G
Sbjct: 209 TSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQG 268
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ ++K V + +ID+ + G +D+A ++ K N +W +++
Sbjct: 269 RQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTS-KKNTVLWTSMI 322
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 41 EAIQLFKQM--LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI 98
+A++ +M L+E +P + L + A + + IH Y+IRSG+ L + S
Sbjct: 29 QALESLSRMNGLIE--KPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSA 86
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
LVD Y+KC ++ A+ IF +K D + W+++IA + + G A+ LF EM+ + ++
Sbjct: 87 LVDFYAKCFAIVDANKIFR--AMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIR 144
Query: 159 PNQVTFTSVLHAC-SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
PN T TSV++AC G+++ +L ++K + ++D G++DDA
Sbjct: 145 PNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDA 202
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 168/290 (57%), Gaps = 4/290 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F +TS+K T +N ++SG+ N + +A++LF +M +++ P + T +S+L A + LA
Sbjct: 205 LFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAM 264
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L Q +H +I+ G + VAS L+D+YSK G + A + + K+ ++W+++I
Sbjct: 265 LLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLD--QTSKKNTVLWTSMI 322
Query: 134 AAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
Y + G G A+ LF+ ++ + + P+ V FT+VL AC+H G +D+G F M+ ++
Sbjct: 323 MGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYG 382
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+ P +D Y C+IDL R G L A +L+ MP PN +W + L AC + +VELG AA
Sbjct: 383 LSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAA 442
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
++EP N Y+ LA++Y G W + +VR ++ + RK P S+
Sbjct: 443 IQLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKPPGWSM 492
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 121/235 (51%), Gaps = 4/235 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC + K+F + W ++++GF N R+A+ LFK+ML ++P+ T
Sbjct: 91 YAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTL 150
Query: 62 NSLLPA-YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A L+ +H ++I+ GF V S LVD Y+ G + A +FN
Sbjct: 151 TSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFN--E 208
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KD +I++ +I+ Y ++ + E A+ LF EM + + P T +S+L ACS + ++ +G
Sbjct: 209 TSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQG 268
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ ++K V + +ID+ + G +D+A ++ K N +W +++
Sbjct: 269 RQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTS-KKNTVLWTSMI 322
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 41 EAIQLFKQM--LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI 98
+A++ +M L+E +P + L + A + + IH Y+IRSG+ L + S
Sbjct: 29 QALESLSRMNGLIE--KPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSA 86
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
LVD Y+KC ++ A+ IF +K D + W+++IA + + G A+ LF EM+ + ++
Sbjct: 87 LVDFYAKCFAIVDANKIFR--AMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIR 144
Query: 159 PNQVTFTSVLHAC-SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
PN T TSV++AC G+++ +L ++K + ++D G++DDA
Sbjct: 145 PNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDA 202
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 172/294 (58%), Gaps = 6/294 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILA 72
+F + ++ W ++ G++ N +EA L K+M+ + T S+L A +
Sbjct: 211 LFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSG 270
Query: 73 DLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
D+ +HCY ++ G + + V + LVD+Y+KCG + A +F + ++++ W+A
Sbjct: 271 DVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFR--SMLKRNVVAWNA 328
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-H 190
++ HG G++AV +F MV+ VKP+ VTF ++L ACSH GLV++G F + +
Sbjct: 329 MLGGLAMHGMGKIAVDMFPSMVEE-VKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVY 387
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
I P ++HY C++ LLGRAGRL++A +++ M I PN V G+L+G+C +H ++LGE
Sbjct: 388 RIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKI 447
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
R E++P NT +I+L+N+YA G+ +R ++ + G++K+P S + V
Sbjct: 448 MRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYV 501
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 43/326 (13%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
+Y C+ + + K+F + S K + + A+ I + E+++LF QM D+ D
Sbjct: 66 LYGSCSLPSHARKLFDEIPQSHKDSVDYTAL----IRHCPPFESLKLFIQMRQFDLPLDG 121
Query: 59 ATFNSLLPAYAILA--DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
L A A L D K +H +++ GF+ +V + L+++Y K G +G A +F
Sbjct: 122 VVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMF 181
Query: 117 NIIPLK-----------------------------DKDIIIWSAIIAAYGKHGHGEMAVS 147
I ++ +++ + W+ +I Y +G + A
Sbjct: 182 EGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFL 241
Query: 148 LFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIIDL 205
L EMV G + + VT SVL ACS G V G + + +K + V T ++D+
Sbjct: 242 LLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDM 301
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNY 265
+ GR++ A ++ R+M +K N W A+LG H +G++A + E +
Sbjct: 302 YAKCGRINAALSVFRSM-LKRNVVAWNAMLGGLAMH---GMGKIAVDMFPSMVEEVKPDG 357
Query: 266 ILLANLYAAVGRWRDVEKVRDMVNEV 291
+ L +A VEK D +++
Sbjct: 358 VTFMALLSACSHSGLVEKGWDYFHDL 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 39/223 (17%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC N + +F K+ WNA+L G + + + A+ +F M VE+V+PD T
Sbjct: 301 MYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSM-VEEVKPDGVT 359
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +LL A + H L+ G+ Y ++ ++ I P
Sbjct: 360 FMALLSACS-----------HSGLVEKGWDYFHDLEP-----------------VYRIKP 391
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+I ++ ++ G+ G E A + M + PN+V S++ +C G + G
Sbjct: 392 ----EIEHYACMVGLLGRAGRLEEAEIMVKNM---RIPPNEVVLGSLIGSCYAHGRLQLG 444
Query: 181 LSLFQFMLKHHIIPLVDHYTCII-DLLGRAGRLDDAYNLIRTM 222
+ + +L+ + PL Y ++ ++ +G+++ A +L + +
Sbjct: 445 EKIMRDLLE--MDPLNTEYHIVLSNMYALSGKVEKANSLRQVL 485
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 168/295 (56%), Gaps = 8/295 (2%)
Query: 12 YKMFMKTSKKRT-APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
+K+F+ TS + W A++S F +A LF Q+ E+ D TF+ L A A
Sbjct: 355 FKLFLDTSGEHDIVSWTAIISVFAERD-PEQAFLLFCQLHRENFVLDRHTFSIALKACAY 413
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
K A +H +++ GF V++ L+ Y + GSL + +F + D++ W+
Sbjct: 414 FVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFT--EMGCHDLVSWN 471
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+++ +Y HG + A+ LF +M V P+ TF ++L ACSH GLV+EG +F M +
Sbjct: 472 SMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTES 528
Query: 191 H-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
H I P +DHY+C++DL GRAG++ +A LIR MP+KP+ +W +LLG+C H +L ++
Sbjct: 529 HGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKL 588
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
AA L+P+N+ YI ++N+Y++ G + + +R + + +RK P S VEV
Sbjct: 589 AADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEV 643
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 146/361 (40%), Gaps = 81/361 (22%)
Query: 1 MYAKCNCG---------NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV 51
MY+KC+ G + ++ +F + WN+++SGF L +AI LF M
Sbjct: 223 MYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYC 282
Query: 52 EDVQPDNATF----NSLLPAYAILAD------LKQAMNIHCYLIRSGFLYRLEVASILVD 101
++ ++ T +SL + D LK +HC ++SG + +EV + LV
Sbjct: 283 NGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVK 342
Query: 102 IYSKCGSLGYAHHIFNII--PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
Y+ G G+ F + + DI+ W+AII+ + + E A LF ++ +
Sbjct: 343 SYADLG--GHISDCFKLFLDTSGEHDIVSWTAIISVFAERD-PEQAFLLFCQLHRENFVL 399
Query: 160 NQVTFTSVLHACS-----------HVGLVDEGL------------------------SLF 184
++ TF+ L AC+ H ++ +G +F
Sbjct: 400 DRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVF 459
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
M H ++ + ++ GR DA +L + M + P+ A + ALL AC V
Sbjct: 460 TEMGCHDLVS----WNSMLKSYAIHGRAKDALDLFKQMDVHPDSATFVALLAACSHAGLV 515
Query: 245 ELGEVAARWTFELEPENTG------NYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
E G F E+ G +Y + +LY G+ + E++ +RK+P
Sbjct: 516 EEGT----QIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEEL--------IRKMPM 563
Query: 299 Q 299
+
Sbjct: 564 K 564
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 5 CNCGNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C CG+L Y +F + ++ W ++SG+ L RE LF ML +P+ F
Sbjct: 126 CKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLA-CFRPNEFAFA 184
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC-GSLG--------YAH 113
S+L A D+K + +H ++ + + VA+ L+ +YSKC G G A
Sbjct: 185 SVLCA-CEEQDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAW 243
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
+F ++ +++I W+++I+ + G G+ A+ LF M +G++ N T VL + +H
Sbjct: 244 MVFK--SMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNH 301
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y + LS ++F + WN++L + + A++A+ LFKQM DV PD+ATF
Sbjct: 446 YGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATF 502
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LL A + +++ I + S G L+ S +VD+Y + G + A + +P
Sbjct: 503 VALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMP 562
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMA 145
+K D +IWS+++ + KHG ++A
Sbjct: 563 MK-PDSVIWSSLLGSCRKHGEADLA 586
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEV--ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+KQ M +H Y++ + ++ + L+++Y KCG L YA ++F+ +P ++ + W+
Sbjct: 94 IKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMP--RRNFVSWTV 151
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
+++ Y + G +LF+ M+ + +PN+ F SVL AC
Sbjct: 152 LVSGYAQFGLIRECFALFSGML-ACFRPNEFAFASVLCAC 190
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 174/308 (56%), Gaps = 7/308 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++ ++ ++F + S + W ++++GF+++ L EAIQLF++ML V + AT
Sbjct: 140 MYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEAT 199
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A L +H + G ++ V + L+ +YSKCG L A +F+ +
Sbjct: 200 VISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVL 259
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+D+ +W+A+I HG + A+ LF EM VKP++ T VL A + GLV EG
Sbjct: 260 --DRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREG 317
Query: 181 LSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F + K + + P + H+ C++DLL + G L++A + I MP+KP+ +W L+ AC
Sbjct: 318 YMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACK 377
Query: 240 SHENVELGEVAARWTFELE---PENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
H + E E + EL+ ++G+YIL +N+YA+ G+W D +VR+++N+ GL K
Sbjct: 378 VHADTERAERLMK-HLELQGMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLVKP 436
Query: 297 PAQSLVEV 304
P S +EV
Sbjct: 437 PGSSRIEV 444
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 3 AKCNCGNLSY-KMFMKTSKK-RTAPWNAVLSGFIHNSLAR---EAIQLFKQMLVEDV--- 54
A+ G+L+Y ++ + T+ + +N ++ + H S +A+ LF ML
Sbjct: 33 AQSPSGDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVP 92
Query: 55 QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
+PD T++ L + L +QA +H ++ + GF + L + + L+ +YS+ G L A
Sbjct: 93 KPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQ 152
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+F+ + +D++ W+++IA + H A+ LF M++ GV N+ T SVL C+
Sbjct: 153 VFD--RMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADS 210
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
G + G + + + I + T +I + + G L+ A + + + + VW A+
Sbjct: 211 GALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDV-LDRDVFVWTAM 269
Query: 235 LGACVSH----ENVEL 246
+ H E +EL
Sbjct: 270 IYGLACHGMCKEAIEL 285
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 162/290 (55%), Gaps = 3/290 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + + WN++++G++ N +A++ F +M V+ +PD T S+L A A L D
Sbjct: 234 IFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGD 293
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L +H + G V S L+D+Y+KCG L A +F ++++ W+A+I
Sbjct: 294 LDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFE--SCNERNVFCWNAMI 351
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
A + +G + + M +S ++P+ VTF +VL AC+H GLV E L + M ++ I
Sbjct: 352 AGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKMEEYGIE 411
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 253
+ HY C++DLLGRAGRL +AY LI+ MP+KPN V GA++GAC H ++++ E +
Sbjct: 412 MGIRHYGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKM 471
Query: 254 TFELEPENTGNY-ILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
++ +LL+N+YAA +W E +R + + G K+P S +
Sbjct: 472 IGVDSAACVNSHNVLLSNIYAASEKWEKSEMIRSSMVDGGSEKIPGCSSI 521
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 48/271 (17%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE--------- 52
YAKC + K+F ++ WNA++ G++ N A+ A+ F++M +
Sbjct: 96 YAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMI 155
Query: 53 ----------------DVQP----DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYR 92
D P D + ++ YA +++ A + + +
Sbjct: 156 GGFARNGDTLTARKFFDKVPYELKDVVIWTMMVDGYAKKGEMEDAREVFELMPERNYF-- 213
Query: 93 LEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
V S +V Y K G + A IF IP+ +++ IW+++IA Y ++G GE A+ F EM
Sbjct: 214 --VWSSMVCGYCKKGDVMEAEAIFRRIPV--RNLEIWNSMIAGYVQNGCGEKALEAFGEM 269
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL----VDHY--TCIIDLL 206
G +P++ T SVL AC+ +G +D G + HH+I V+ + + +ID+
Sbjct: 270 GVDGFEPDEFTVVSVLSACAQLGDLDAGKQM------HHMIECKGIAVNQFVLSGLIDMY 323
Query: 207 GRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ G L +A L+ + N W A++
Sbjct: 324 AKCGDLVNA-RLVFESCNERNVFCWNAMIAG 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
+ A+ L+KQ D D LL A L ++H I++G + + + +
Sbjct: 34 KRALVLYKQTR-HDTTHDPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAI 92
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
V Y+KCG + A +F++ + +++ + W+A+I Y ++G + A+ F EM
Sbjct: 93 VAAYAKCGVVCDARKVFDL--MHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGK---- 146
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQ---FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAY 216
+V+++ ++ + G F + LK +I +T ++D + G ++DA
Sbjct: 147 TRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVI-----WTMMVDGYAKKGEMEDAR 201
Query: 217 NLIRTMPIKPNHAVWGALL-GACVSHENVE 245
+ MP + N+ VW +++ G C + +E
Sbjct: 202 EVFELMPER-NYFVWSSMVCGYCKKGDVME 230
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 163/293 (55%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
KMF + K+ W++++ G++ N + ++ F+ M + ++P+ + ++L A A L
Sbjct: 201 KMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLG 260
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L +H + F + + + LVD+Y+KCG + + +F+ + ++DI W+ +
Sbjct: 261 LLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFD--GMMERDIWTWTVM 318
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I H + A+ LF E ++ G +P V F VL+ACS GLV EG F+ M+ +
Sbjct: 319 ICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYG 378
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P ++HY C++DL RAG +D+A LI TM ++P+ +W LL AC H VE+GE
Sbjct: 379 ISPEMEHYGCMVDLFARAGLIDEAVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIG 438
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+++P + G+Y+ LA +YA +W DV +VR ++ E K+ SL+EV
Sbjct: 439 NKLIKMDPTHDGHYVQLAGIYAKSRKWDDVVRVRRLMVERVPIKVAGWSLIEV 491
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C S +F ++ W ++ G + A+EA+ LF++ + E +P N
Sbjct: 290 MYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVI 349
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + + + ++ G +E +VD++++ G + A + +
Sbjct: 350 FVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETM 409
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+ + D ++W+ ++ A HG EM + N++++
Sbjct: 410 TV-EPDPVMWATLLDACEIHGFVEMGEKIGNKLIK 443
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 169/285 (59%), Gaps = 5/285 (1%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
++ WN+V++GF++ S EA+++F +M ++++Q D TF+ +L A L+ L M IHC
Sbjct: 235 SSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLSALTWGMLIHC 294
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG 142
I+ G + V S L+D+YSKCG + A IFN+ L +++++ W+A+I Y ++G
Sbjct: 295 CTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNV--LSNRNLVSWNAMIYGYARNGDS 352
Query: 143 EMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVDE-GLSLFQFMLKHH-IIPLVDHY 199
A+SLF + ++ KP+ +TF +V+ ACSH + E G+ F M+ + I P + H
Sbjct: 353 AQAISLFELLKMERDTKPDGITFLNVISACSHSQIPFEMGIQYFDAMINEYGIAPSIKHC 412
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 259
+I L+G+ G L A +I + + VW +LL AC + E++ + E+AA LE
Sbjct: 413 CSMIRLMGQKGELSRAQKMIHELGFESCGVVWRSLLAACGTQEDLHVAEIAAAKVIGLER 472
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ Y++L+N+YA+ GRW DV +R ++++ +RK S +EV
Sbjct: 473 DEDYVYVMLSNMYASFGRWEDVNVIRSLMSKKRVRKEAGSSWIEV 517
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 42/243 (17%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K + ++ +F++ + WN ++SG++H ++A+ LF ++ + D +F
Sbjct: 51 YVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSF 110
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S + A A L+ LK +IH ++ G VA+ L+D+Y KCGS+ A IF+ I
Sbjct: 111 TSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIA- 169
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
DKD+I W+++IA AC++ G + G
Sbjct: 170 -DKDVISWNSVIA-----------------------------------ACANNGNIGLGF 193
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
Q M P V Y +I+ + +AG+++DA ++ TMP PN + W +++ V+
Sbjct: 194 KFLQLMPN----PDVVSYNGLINGIAQAGKIEDAVRILSTMPC-PNSSSWNSVITGFVNR 248
Query: 242 ENV 244
V
Sbjct: 249 SRV 251
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 92/174 (52%), Gaps = 4/174 (2%)
Query: 75 KQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
K IH Y IRSG+ + + V++ L+ Y K +AH++F IP +++ W+ +I
Sbjct: 22 KFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIP--QPNVVSWNTLI 79
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
+ Y G + A+SLF ++ +S + + +FTS + AC+ + L+ G S+ +K +
Sbjct: 80 SGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMD 139
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
C+ID+ G+ G ++ A + + K + W +++ AC ++ N+ LG
Sbjct: 140 NNTVVANCLIDMYGKCGSVERAVRIFSDIADK-DVISWNSVIAACANNGNIGLG 192
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 162/299 (54%), Gaps = 16/299 (5%)
Query: 7 CGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLP 66
C + ++F K WN+VL+G++ + +A++LF Q+ V+ D+ TF++++
Sbjct: 357 CMEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIR 416
Query: 67 AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
+ LA L+ +H ++ GF + + KC + +
Sbjct: 417 CCSDLATLQLGQQVHVLSLKVGF----DTNKYVGKDAKKC-----------FETTSNDNA 461
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
IIW++II Y +HG G +A+ LF M + VKP+ +TF +VL ACSH GLV+EG + Q
Sbjct: 462 IIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQS 521
Query: 187 MLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
M IPL ++HY C +DL GRAG L++ L+ TMP +P+ V LLGAC S N+E
Sbjct: 522 MESDFGIPLRMEHYACAVDLYGRAGYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIE 581
Query: 246 LGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
L A+ LEPE+ Y+LL++LY + W + V ++ E G++K+P S +EV
Sbjct: 582 LASHVAKMLLVLEPEDHSTYVLLSDLYGRLKMWDEKASVTRLMRERGVKKVPGWSWIEV 640
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 6/264 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+KC L+ ++F K ++ T WNAV+SG+++ + QL M V DN TF
Sbjct: 44 YSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHAFDNHTF 103
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S L A L+ +H +I+ + S L+D+Y+KCG + A +F +P
Sbjct: 104 GSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMP- 162
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ + + W+ +IA Y + G +MA L GV + T + +L V +
Sbjct: 163 -ECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVM 221
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL-IRTMPIKPNHAV-WGALLGACV 239
L ++KH + II L DA + + + + V W ++L A +
Sbjct: 222 QLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYL 281
Query: 240 SH--ENVELGEVAARWTFELEPEN 261
H EN+ +F EP++
Sbjct: 282 LHKKENLAFDVFIEMQSFGFEPDD 305
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 4/242 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + +F + WN +++G+ A L + +E V D+ T
Sbjct: 144 MYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGT 203
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NII 119
+ LL + M +HC +++ G V + ++ YS+C SL A +F +
Sbjct: 204 VSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAV 263
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ +D++ W++++AAY H +A +F EM G +P+ ++T V+ CS
Sbjct: 264 TVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSR 323
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDL-LGRAGR-LDDAYNLIRTMPIKPNHAVWGALLGA 237
G SL ++K V +I + LG R ++DA + +M +K + W ++L
Sbjct: 324 GESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVK-DCCTWNSVLAG 382
Query: 238 CV 239
V
Sbjct: 383 YV 384
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG 140
HC I+SG + L ++ L+ YSKC L A +F+ +P +D + W+A+I+ Y
Sbjct: 22 HCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMP--QRDTVSWNAVISGYVNTA 79
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
+ L N M SG + TF S L + ++ G L M+K + V +
Sbjct: 80 DLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGS 139
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++D+ + GR+DDA + R MP + N+ W L+
Sbjct: 140 ALLDMYAKCGRVDDALVVFRYMP-ECNYVSWNTLIAG 175
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 175/305 (57%), Gaps = 8/305 (2%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
+CG L + +F K+ + W A+++G++ + EA+ LF++M V V+PD +
Sbjct: 283 SCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVA 342
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
LL A L L+ IH Y+ + + V + L+++Y+KCG + + +FN LK+
Sbjct: 343 LLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFN--GLKE 400
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
KD W++II +G A+ LF EM G KP+ VTF +L+ACSH GLV+EG L
Sbjct: 401 KDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKL 460
Query: 184 FQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH---AVWGALLGACV 239
F M + I P ++HY C IDLLGRAG L +A LI+ +P + N A++G+ L AC
Sbjct: 461 FHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEELIKKLPDQKNETIVAIYGSFLSACR 520
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
++ N ++GE A +++ ++ + LLA++YA+ RW D K R + ++ +RK+P
Sbjct: 521 TYGNTDMGERIATALEKVKSSDSSLHSLLASIYASADRWEDASKTRSKMKDLHIRKVPGC 580
Query: 300 SLVEV 304
S +EV
Sbjct: 581 SAIEV 585
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 156/366 (42%), Gaps = 76/366 (20%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP-DNA 59
MYA+ + K+F + S++ + WN ++SG + EA+++F++M V+ + A
Sbjct: 147 MYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKISEA 206
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S L A A +++ IH ++I + + + + L+D+Y KCG + A IF+ +
Sbjct: 207 TVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGM 266
Query: 120 PLKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFN 150
K+ +D+++W+A+I Y + + AV+LF
Sbjct: 267 IEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFE 326
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII-------PLVDHY---- 199
EM GVKP++ ++L C+ +G ++ G + ++ ++ I+ L++ Y
Sbjct: 327 EMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCG 386
Query: 200 --------------------TCIIDLLGRAGRLDDAYNLIRTMPI---KPNHAVWGALLG 236
T II L G+ +A L M I KP+ + LL
Sbjct: 387 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLN 446
Query: 237 ACVSHENVELGEV---AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
AC VE G + + +EP N +Y +L G + E++ +
Sbjct: 447 ACSHGGLVEEGHKLFHSMSCIYGIEP-NLEHYGCFIDLLGRAGLLHEAEEL--------I 497
Query: 294 RKLPAQ 299
+KLP Q
Sbjct: 498 KKLPDQ 503
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 115/236 (48%), Gaps = 10/236 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++ F + + I LF Q+ + + PDN T+ +L A A +AD +Q IH ++
Sbjct: 71 YNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFRQGTKIHAFVF 130
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G V++ +D+Y++ G + + +F+ + ++D + W+ +I+ K E A
Sbjct: 131 KTGLDSDYYVSNSFMDMYAELGRIDFVRKLFD--EISERDSVSWNVMISGCVKCRRFEEA 188
Query: 146 VSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
V +F M V S K ++ T S L AC+ V+ G + F+++ + + ++D
Sbjct: 189 VEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLD 248
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV-AARWTFELEP 259
+ + G + A + M I+ N W +++ VS GE+ AR F+ P
Sbjct: 249 MYCKCGYVSVAREIFDGM-IEKNVNCWTSMVTGYVS-----CGELDKARDLFDKSP 298
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C S ++F +K TA W +++ G N EA++LF++M + +PD+ T
Sbjct: 381 MYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVT 440
Query: 61 FNSLLPAYAILADLKQAMNI-HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F LL A + +++ + H G LE +D+ + G L A + +
Sbjct: 441 FIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEELIKKL 500
Query: 120 PLKDKDII--IWSAIIAAYGKHGHGEMA 145
P + + I I+ + ++A +G+ +M
Sbjct: 501 PDQKNETIVAIYGSFLSACRTYGNTDMG 528
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 158/293 (53%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ F T K W + ++G + N + LF + L + + D +S++ A A +A
Sbjct: 311 RCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMA 370
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ I Y ++ G V + + +Y+K G + A + F + D++ WS +
Sbjct: 371 AARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQ--ETEKPDVVSWSVM 428
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I +Y +HG + ++ LF M SG+ PNQ+T VL ACSH GLVDEGL ++ M K +
Sbjct: 429 ICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYG 488
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+ V H CI+DLLGRAGRL++A I + + +W ALLGAC H++ E+G+ A
Sbjct: 489 MAANVKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIA 548
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
ELEP +Y+LL NLY VG+ + +VR ++ + G++K P S +EV
Sbjct: 549 DKVIELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEV 601
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIH---NSLAREAIQLFKQMLVEDVQPD 57
MY+KCN S +F +S K WN+++S + + E QL +M
Sbjct: 86 MYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFS 145
Query: 58 NATFNSLLPAYAILADLK--QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
+ T +S+L A D IH + I+ G + + VA+ L+D+Y+K G L A +
Sbjct: 146 DYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRV 205
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHG----HGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
F LK K+ +++A+IA + + G + AV +FNEM + GVK ++ TF+SV+ AC
Sbjct: 206 FEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKAC 265
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
G + G + +LK+ + + ++DL G +DD P K + W
Sbjct: 266 VGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTP-KLDVVSW 324
Query: 232 GALLGACVSHENVELG 247
+ + CV + E G
Sbjct: 325 TSAIAGCVKNGKFENG 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNIIP 120
+LL A +L+ IH ++ +GFL + + L+++YSKC + + +F+
Sbjct: 45 TTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSS 104
Query: 121 LKDKDIIIWSAIIAAYGKHG----HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+KD + W++II+AY K G +GE+ L M + G + T +SVL+AC
Sbjct: 105 IKDN--VSWNSIISAYAKLGTKTSYGEV-FQLVYRMHRFGYAFSDYTLSSVLNACCFC-- 159
Query: 177 VDE----GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP-NHAVW 231
VD+ G + F +K + V T ++D+ ++G L DA + +K N ++
Sbjct: 160 VDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMY 219
Query: 232 GALLGA 237
A++
Sbjct: 220 NAMIAG 225
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + + F +T K W+ ++ + + A+E+++LF+ M V + P+ T
Sbjct: 400 MYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQIT 459
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+L A + + + + + + + G ++ ++ +VD+ + G L A
Sbjct: 460 LLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQRFIYDS 519
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+D D ++W A++ A H EM + +++++
Sbjct: 520 GFED-DPVLWRALLGACKVHKDTEMGKRIADKVIE 553
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 158/293 (53%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ F T K W + ++G + N + LF + L + + D +S++ A A +A
Sbjct: 311 RCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMA 370
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ I Y ++ G V + + +Y+K G + A + F + D++ WS +
Sbjct: 371 AARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQ--ETEKPDVVSWSVM 428
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I +Y +HG + ++ LF M SG+ PNQ+T VL ACSH GLVDEGL ++ M K +
Sbjct: 429 ICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYG 488
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+ V H CI+DLLGRAGRL++A I + + +W ALLGAC H++ E+G+ A
Sbjct: 489 MAANVKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIA 548
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
ELEP +Y+LL NLY VG+ + +VR ++ + G++K P S +EV
Sbjct: 549 DKVIELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEV 601
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIH---NSLAREAIQLFKQMLVEDVQPD 57
MY+KCN S +F +S K WN+++S + + E QL +M
Sbjct: 86 MYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFS 145
Query: 58 NATFNSLLPAYAILADLK--QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
+ T +S+L A D IH + I+ G + + VA+ L+D+Y+K G L A +
Sbjct: 146 DYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRV 205
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHG----HGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
F LK K+ +++A+IA + + G + AV +FNEM + GVK ++ TF+SV+ AC
Sbjct: 206 FEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKAC 265
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
G + G + +LK+ + + ++DL G +DD P K + W
Sbjct: 266 VGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTP-KLDVVSW 324
Query: 232 GALLGACVSHENVELG 247
+ + CV + E G
Sbjct: 325 TSAIAGCVKNGKFENG 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNIIP 120
+LL A +L+ IH ++ +GFL + + L+++YSKC + + +F+
Sbjct: 45 TTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSS 104
Query: 121 LKDKDIIIWSAIIAAYGKHG----HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+KD + W++II+AY K G +GE+ L M + G + T +SVL+AC
Sbjct: 105 IKDN--VSWNSIISAYAKLGTKTSYGEV-FQLVYRMHRFGYAFSDYTLSSVLNACCFC-- 159
Query: 177 VDE----GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP-NHAVW 231
VD+ G + F +K + V T ++D+ ++G L DA + +K N ++
Sbjct: 160 VDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMY 219
Query: 232 GALLGA 237
A++
Sbjct: 220 NAMIAG 225
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + + F +T K W+ ++ + + A+E+++LF+ M V + P+ T
Sbjct: 400 MYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQIT 459
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+L A + + + + + + + G ++ ++ +VD+ + G L A
Sbjct: 460 LLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQRFIYDS 519
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+D D ++W A++ A H EM + +++++
Sbjct: 520 GFED-DPVLWRALLGACKVHKDTEMGKRIADKVIE 553
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 171/312 (54%), Gaps = 11/312 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTA-PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
YA C + K+F + + R WN ++ + + +F +M+ + +PD
Sbjct: 129 FYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMM-KVYEPDCY 187
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRS---GFLYRLEVASILVDIYSKCGSLGYAHHIF 116
T S++ A L L M +H ++++ + + V + LVD+Y KCGSL A +F
Sbjct: 188 TMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVF 247
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVG 175
+ +D+ W++II + HG + A+ F MV+ + PN +TF VL AC+H G
Sbjct: 248 E--GMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSG 305
Query: 176 LVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
+VDEGL F+ M K +++ P + HY C++DL RAG + +A N++ MPIKP+ +W +L
Sbjct: 306 MVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSL 365
Query: 235 LGACV-SHENVELGEVAARWTFELEPENTGN-YILLANLYAAVGRWRDVEKVRDMVNEVG 292
L AC H +VEL E A+ FE G Y+LL+ +YA+ RW DV +R ++N+ G
Sbjct: 366 LDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKG 425
Query: 293 LRKLPAQSLVEV 304
+ K P SL+E+
Sbjct: 426 VSKKPGCSLIEI 437
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 118/217 (54%), Gaps = 10/217 (4%)
Query: 26 WNAVLSGFIHNSLARE-AIQLFKQMLVE---DVQPDNATFNSLLPAYAILADLKQAMNIH 81
WN ++ + ++L ++ AI L+K ++ E ++ PD T+ +L A A L L + +H
Sbjct: 49 WNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFEGKQVH 108
Query: 82 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGH 141
++++ GF + + L+ Y+ CG L A +F+ + + ++++ W+ +I +Y K G
Sbjct: 109 AHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRM-CEWRNVVSWNVMIDSYAKVGD 167
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK---HHIIPLVDH 198
++ + +F EM++ +P+ T SV+ AC +G + G+ + F+LK +++ V
Sbjct: 168 YDIVLIMFCEMMKV-YEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLV 226
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
TC++D+ + G L+ A + M + + + W +++
Sbjct: 227 NTCLVDMYCKCGSLEIAKQVFEGMSYR-DVSSWNSII 262
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 161/290 (55%), Gaps = 3/290 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + + WN++++G++ N +A++ F +M V+ +PD T S+L A A L D
Sbjct: 234 IFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGD 293
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L +H + G V S L+D+Y+KCG L A +F ++++ W+A+I
Sbjct: 294 LDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFE--SCNERNVFCWNAMI 351
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
A + +G + + M +S ++ + VTF +VL AC+H GL+ E L + M ++ I
Sbjct: 352 AGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSACAHGGLMSEALEVISKMEEYGIE 411
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 253
+ HY C++DLLGRAG+L +AY LI+ MP+KPN V GA++GAC H ++++ E +
Sbjct: 412 MGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKM 471
Query: 254 TFELEPENTGNY-ILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
++ +LL+N+YAA +W E +R + + G K+P S +
Sbjct: 472 IGADSAACVNSHNVLLSNIYAASEKWEKAEMIRSSMVDGGSEKIPGYSSI 521
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 122/271 (45%), Gaps = 48/271 (17%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC + K+F ++ WNA++ G++ N A+ A+ F++M ++
Sbjct: 96 YAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEM----PGKTRVSW 151
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ ++ +A D A + L + + +++VD Y+K G + A +F ++P
Sbjct: 152 SQMIGGFARNGDTLTARKFFDKVPYE--LKDVVIWTVMVDGYAKKGEMEDAREVFELMPE 209
Query: 122 KD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
++ +++ IW+++IA Y ++G GE A+ F EM
Sbjct: 210 RNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEM 269
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL----VDHY--TCIIDLL 206
G +P++ T SVL AC+ +G +D G + HH+I V+ + + +ID+
Sbjct: 270 GVDGFEPDEFTVVSVLSACAQLGDLDAGKQM------HHMIECKGIAVNQFVLSGLIDMY 323
Query: 207 GRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ G L +A L+ + N W A++
Sbjct: 324 AKCGDLVNA-RLVFESCNERNVFCWNAMIAG 353
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
+ A+ L+KQ D D LL A L ++H I++G + + + +
Sbjct: 34 KRALVLYKQTR-HDTTHDPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAI 92
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
V Y+KCG + A +F+++P +++++ W+A+I Y ++G + A+ F EM
Sbjct: 93 VAAYAKCGVVCDARKVFDLMP--ERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGK---- 146
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQ---FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAY 216
+V+++ ++ + G F + LK +I +T ++D + G ++DA
Sbjct: 147 TRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVI-----WTVMVDGYAKKGEMEDAR 201
Query: 217 NLIRTMPIKPNHAVWGALL-GACVSHENVE 245
+ MP + N+ VW +++ G C + +E
Sbjct: 202 EVFELMPER-NYFVWSSMVCGYCKKGDVME 230
>Medtr2g082550.1 | PPR containing plant-like protein, putative | HC
| chr2:34637734-34634734 | 20130731
Length = 631
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 168/325 (51%), Gaps = 45/325 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIH--------------------NSLAR 40
+YAKC C ++ +F + W+ VL+ F + N +
Sbjct: 206 LYAKCLCVREAHAIFDLMPHRDVVSWSGVLTYFTNKEYEKGLSLFSQMCRDGVETNEVTW 265
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
+A+++ ++M +P+ T +S+L A + L+ IH Y+ R ++
Sbjct: 266 KAMEMLRKMQNMGFKPNEITISSILQACYLSESLRMCKEIHYYVFRHWKVW--------- 316
Query: 101 DIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPN 160
++F++I +KD ++ W+ +I A HG+G+ A+ LF +M+ S VKP+
Sbjct: 317 -------------NVFDMIAIKD--VVAWTTMINANAMHGNGKEALFLFEKMLLSMVKPD 361
Query: 161 QVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLI 219
VTF VL +CSH LV+EG+ +F M K H++ P HY+C++D+ RAGRL++AY I
Sbjct: 362 SVTFICVLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSCVVDIYSRAGRLNEAYEFI 421
Query: 220 RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWR 279
+ MP+ P W +LL C ++NVEL +++A+ FE+EP + +Y+ L N+ W
Sbjct: 422 QRMPMGPTAGAWKSLLAGCRVYKNVELAKISAKKLFEIEPSRSRDYVALCNILVTAKLWS 481
Query: 280 DVEKVRDMVNEVGLRKLPAQSLVEV 304
+ K+R + E G+ K P S + V
Sbjct: 482 EASKIRMFMKESGITKTPGCSWLHV 506
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 167/297 (56%), Gaps = 7/297 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+MF + ++ W+A+++ + S RE + LF +M E V+P+++ ++L A A L
Sbjct: 202 EMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLG 261
Query: 73 DLKQAMNIHCYLIRSGFLYRLEV-ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
L Q M +H Y R + + A+ LVD+YSKCG + A +F+ I DKD+ W+A
Sbjct: 262 ALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGI--SDKDVGAWNA 319
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KH 190
+I+ +G ++ LF +M+ G KPN+ TF +VL AC+H +V EGL LF+ M +
Sbjct: 320 MISGVALNGDARKSLELFQQMIVCGNKPNETTFVAVLTACTHARMVREGLRLFEEMSGTY 379
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELG 247
+ P +HY C++DLL R+G +++A I + VWGA+L AC ++N+ +G
Sbjct: 380 GVEPCAEHYACVVDLLSRSGMVEEAERFIEEKMGGFAAGDANVWGAILNACRIYKNINVG 439
Query: 248 EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ ++ + G ++L N+Y G + +VR M++E G++K P S++EV
Sbjct: 440 NRVWKKLIDMGVADCGTHVLTYNIYREAGWDAEANRVRSMISEAGMKKKPGCSIIEV 496
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 120/279 (43%), Gaps = 53/279 (18%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA+ NL+++ + T N ++ ++ N A+ + ML + +N T
Sbjct: 56 LYARSIFHNLTHR------NRNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAVNNYT 109
Query: 61 FNSLLPAYA--ILADLKQAMNI------HCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 112
F L+ + I A K A ++ HC+++ G V S ++ YS G L A
Sbjct: 110 FPPLIKSCTALIAASSKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKA 169
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ------------------ 154
+F+ KD+++W+A+I YGK G E A +F+EM +
Sbjct: 170 RVLFD--QTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSE 227
Query: 155 -------------SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII---PLVDH 198
GV+PN +VL AC+H+G + +G+ + + + + P++
Sbjct: 228 FREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPIL-- 285
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
T ++D+ + G ++ A ++ + K + W A++
Sbjct: 286 ATALVDMYSKCGCVESALSVFDGISDK-DVGAWNAMISG 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC C + +F S K WNA++SG N AR++++LF+QM+V +P+ T
Sbjct: 292 MYSKCGCVESALSVFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETT 351
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA------------SILVDIYSKCGS 108
F ++L A H ++R G E++ + +VD+ S+ G
Sbjct: 352 FVAVLTACT-----------HARMVREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGM 400
Query: 109 LGYAHHIF--NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV 157
+ A + D +W AI+ A + + + ++ +++ GV
Sbjct: 401 VEEAERFIEEKMGGFAAGDANVWGAILNACRIYKNINVGNRVWKKLIDMGV 451
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 167/291 (57%), Gaps = 4/291 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + K + W ++ G+ N EA+ LF++M+V +P+ AT S+L A
Sbjct: 196 VFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGC 255
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L+ IH ++ G + + + LV +Y+K G + A +F+ +P +++++ W+A+I
Sbjct: 256 LELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMP--ERNVVTWNAMI 313
Query: 134 AAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKHH 191
HGH E A+ LF M + V PN VTF VL AC H GL+D G +F M + H
Sbjct: 314 CGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMKVVHG 373
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P ++HY C++DLLGR G+L +A +I+ MP KP+ + GALL A ++ N E+ E
Sbjct: 374 IEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGALLAASKNNGNTEVAERVV 433
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+ L+P N G ++ L+N+YA G+W++V ++R M+ E L+K P SLV
Sbjct: 434 KQILTLDPHNHGVHVSLSNMYAEAGQWQEVSRLRKMMKEEKLKKAPGWSLV 484
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNL + ++F K + WN ++ ++ L+ QM V P TF LL
Sbjct: 87 GNLEHASRIFSSLHKPNSFMWNTLIRAH-QQQQPHISLSLYIQMRRHGVIPGKHTFPFLL 145
Query: 66 PAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
A + L++ L +H ++++ G + V + LV YS G L A ++F+ IP+ K
Sbjct: 146 KACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPM--K 203
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
++ +W+ +I Y ++ A+ LF MV G +PN T SVL C+ G ++ G +
Sbjct: 204 NLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELGERIH 263
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
+FM + V T ++ + + G + A L MP + N W A++ SH +V
Sbjct: 264 EFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPER-NVVTWNAMICGLASHGHV 322
Query: 245 E 245
E
Sbjct: 323 E 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MYAK + K+F + ++ WNA++ G + +A+ LF+ M E+ V P+
Sbjct: 284 MYAKNGDILTARKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAV 343
Query: 60 TFNSLLPAYAILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF +L A + + C + + G +E +VD+ + G L A +
Sbjct: 344 TFVGVLSACCHAGLIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKG 403
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
+P K D++I A++AA +G+ E+A + +++
Sbjct: 404 MPWK-PDVVILGALLAASKNNGNTEVAERVVKQIL 437
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 169/304 (55%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + ++F K W +++G+ + AI+ F +M E + D+
Sbjct: 361 MYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYV 420
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L A LA L+Q IHCY + G+ + V+ L+D+Y+K G+L A+ +F+ +
Sbjct: 421 LSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQV- 479
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+ W++++ + HG + A+ LF E+++ G+ P+QVTF S+L ACSH LV++G
Sbjct: 480 -SHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQG 538
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP-IKPNHAVWGALLGACV 239
L+ +M ++P HY+C++ LL RA L++A +I P ++ N +W LL ACV
Sbjct: 539 KLLWNYMSSIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACV 598
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
++N+++G AA E+ ILL+NLYAA GRW +V ++R + + + K P
Sbjct: 599 INKNLKVGVRAAEEVLRFNAEDGPTLILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPGL 658
Query: 300 SLVE 303
S +E
Sbjct: 659 SWIE 662
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGF--IHNSLAREAIQLFKQMLVEDVQPDN 58
MY++C ++++F K ++ +NA+L+ + + A L+ QM ++P N
Sbjct: 55 MYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSN 114
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T SLL A ++ DL + +H ++ GFL + V + L+++YS C L A +F
Sbjct: 115 MTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVF-- 172
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ ++D + W+++I Y K+ E V LF EM+ G P TF +L ACS +
Sbjct: 173 CDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYF 232
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G + ++ ++ P + ++D+ AG AY + M K + W +++
Sbjct: 233 SGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRME-KWDLVSWNSMISGY 291
Query: 239 VSHENVE 245
+E+ E
Sbjct: 292 FENEDGE 298
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNATF 61
CN G+ +Y +F + K WN+++SG+ N +A+ LF Q+ +PD+ T+
Sbjct: 261 CNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTY 320
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++ A +H +I++GF+ + V S LV +Y K A +F IP
Sbjct: 321 AGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIP- 379
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG- 180
KD I+W+ +I Y K G A+ F+EM + + + VL C+++ ++ +G
Sbjct: 380 -GKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGE 438
Query: 181 -LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ + + L + + V +ID+ + G L+ AY L+ + P+ W ++LG
Sbjct: 439 IIHCYAYKLGYDVEMSVS--GSLIDMYAKNGNLEAAY-LVFSQVSHPDLKCWNSMLGGFS 495
Query: 240 SHENVE 245
H V+
Sbjct: 496 HHGMVD 501
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C + + +F +++ WN+++ G++ N + + LF +M+ P T
Sbjct: 158 MYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYT 217
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L A + L D IH +I L + + LVD+Y G A+ IF+
Sbjct: 218 FCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFS--R 275
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHA 170
++ D++ W+++I+ Y ++ GE A++LF ++ KP+ T+ ++ A
Sbjct: 276 MEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISA 326
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 18/194 (9%)
Query: 64 LLPAYAILADLKQAMNIHCYLI--------RSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
LL I L++A +H L+ +S FLY + ++ +YS+CGSL AH +
Sbjct: 14 LLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLY-----NNIISMYSRCGSLEDAHQV 68
Query: 116 FNIIPLKDKDIIIWSAIIAAYGK--HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
F+ +P + + ++A++AAY + H A +L+ +M G++P+ +T TS+L A S
Sbjct: 69 FDKMPQRTH--VSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASL 126
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
G + GL L LK + + T ++++ L A ++ M + N A W +
Sbjct: 127 HGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVA-WNS 185
Query: 234 LLGACVSHENVELG 247
L+ + ++ +E G
Sbjct: 186 LILGYLKNDKIEKG 199
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 170/304 (55%), Gaps = 33/304 (10%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC + + K+F + K W+ +++G++ N+ +A+++F+ ++ E + +
Sbjct: 59 YFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLVANEV-- 116
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ A A L L + + IR + + + +VD+Y++CG++ A +F +
Sbjct: 117 -GAVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFE--EM 173
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K+KD+I W+++I+ HG+ E A+ F MV++G+ P +TFT+VL A SH GLV++G
Sbjct: 174 KEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQ 233
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+F+ M + + + P ++HY C++DLLGRAG+L++A N I MPIKPN
Sbjct: 234 EIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEMPIKPNAP----------- 282
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
++PE++G Y LL+N+YA +W+D +R ++ E G+RK P S
Sbjct: 283 ----------------MKPEHSGYYALLSNIYARTNKWKDATVMRRLMKEKGVRKQPGYS 326
Query: 301 LVEV 304
L+E+
Sbjct: 327 LIEI 330
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+C + ++F + +K W +++SG + A EA++ F M+ + P + T
Sbjct: 156 MYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDIT 215
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F ++L AY+ +++ I + R L RLE +VD+ + G L A + +
Sbjct: 216 FTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEM 275
Query: 120 PLK 122
P+K
Sbjct: 276 PIK 278
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 10/302 (3%)
Query: 8 GNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNL ++++F + +K W +++S ++ N + + ++LF+ ML+ +V+PD + L
Sbjct: 125 GNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVEPDQIVLTTAL 184
Query: 66 PAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
A A L+ IH ++ R G L + + L+++Y+KCG +G A +F+ ++K
Sbjct: 185 SACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFD--NTRNK 242
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D+ W+++I + HG A+ LF+EM V PN VTF VL ACSH GLV+EG F
Sbjct: 243 DVTTWTSMIVGHAVHGEAREALQLFSEM-NFIVSPNDVTFIGVLMACSHAGLVEEGKRNF 301
Query: 185 QFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
+ M + + I P H+ C++DL R+G L +AY+ I MP+ PN +W LLGAC H N
Sbjct: 302 RSMNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEMPVPPNAVMWRTLLGACSLHGN 361
Query: 244 VELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEV---GLRKLPAQS 300
++L L+P G+ + L+N+YA W VR+ + + G + S
Sbjct: 362 LKLATEVRDKLINLDPGYVGDSVALSNIYADKEMWDKKIIVRNQIKQSKAHGFSSIEVGS 421
Query: 301 LV 302
LV
Sbjct: 422 LV 423
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN------- 79
N L ++ + + LFK +L + + TFNS+ +++ L LK +N
Sbjct: 40 NQTLKNYLECNNHTTVVLLFKTLL----EQKSPTFNSI-DSFSFLYTLKACINKNHSYVL 94
Query: 80 ---IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAY 136
+H +I+ G+ +++ + L+ +Y+ G+L AH +F+ IP +K+II W+++I+AY
Sbjct: 95 GKQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIP--EKNIICWTSLISAY 152
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLV 196
++ + LF M+ + V+P+Q+ T+ L AC+ G ++ G + F+ + + +
Sbjct: 153 VENHKSNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKID 212
Query: 197 DHY-TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTF 255
H +I++ + G + +A L K ++G V E E ++ + F
Sbjct: 213 LHLNNALINMYAKCGDIGNARKLFDNTRNKDVTTWTSMIVGHAVHGEAREALQLFSEMNF 272
Query: 256 ELEPEN 261
+ P +
Sbjct: 273 IVSPND 278
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + K+F T K W +++ G + AREA+QLF +M V P++ T
Sbjct: 222 MYAKCGDIGNARKLFDNTRNKDVTTWTSMIVGHAVHGEAREALQLFSEMNF-IVSPNDVT 280
Query: 61 FNSLLPAYAILADLKQA-MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + +++ N G R +VD++ + G L A+ +
Sbjct: 281 FIGVLMACSHAGLVEEGKRNFRSMNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEM 340
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
P+ + ++W ++ A HG+ ++A + ++++
Sbjct: 341 PVP-PNAVMWRTLLGACSLHGNLKLATEVRDKLI 373