Miyakogusa Predicted Gene

Lj5g3v2241260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2241260.1 Non Characterized Hit- tr|C5KE09|C5KE09_PERM5
Putative uncharacterized protein (Fragment)
OS=Perkins,30,0.00001,BRAIN PROTEIN 44-LIKE,NULL; UPF0041 BRAIN
PROTEIN 44-RELATED,NULL; UPF0041,Uncharacterised protein
f,CUFF.57033.1
         (108 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g112340.1 | pyruvate carrier-like protein | HC | chr1:5085...   194   1e-50
Medtr1g112340.2 | pyruvate carrier-like protein | HC | chr1:5085...   194   1e-50
Medtr2g025480.1 | light induced-like protein | HC | chr2:9093428...    74   3e-14
Medtr2g025470.1 | light induced-like protein | HC | chr2:9089796...    66   6e-12
Medtr2g025470.3 | light induced-like protein | HC | chr2:9089796...    66   8e-12
Medtr7g031440.1 | transmembrane protein, putative | LC | chr7:10...    62   1e-10
Medtr2g025470.2 | light induced-like protein | HC | chr2:9089796...    58   2e-09
Medtr2g025470.4 | light induced-like protein | HC | chr2:9089796...    58   2e-09

>Medtr1g112340.1 | pyruvate carrier-like protein | HC |
           chr1:50856512-50859959 | 20130731
          Length = 108

 Score =  194 bits (494), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 89/107 (83%), Positives = 100/107 (93%), Gaps = 1/107 (0%)

Query: 3   SSFRAFLNSPIGPKTTHFWGPVANWGFVVAGLADLNKPPEMLSGNMTSAMCVYSALFMRF 62
           ++F+AF NSP+GPKTTHFWGPVANWGFV AGLAD+NKPPEM+SGNMT AMC+YSALFMRF
Sbjct: 2   AAFKAFWNSPVGPKTTHFWGPVANWGFVAAGLADINKPPEMISGNMTGAMCIYSALFMRF 61

Query: 63  AWMVQPRNYLLLACHASNETVQLYHFTRWAKSQGYLSGKKE-EASPQ 108
           AWMVQPRNYLLLACHASNETVQLY  TRWA+++GYLSGKKE EAS +
Sbjct: 62  AWMVQPRNYLLLACHASNETVQLYQHTRWARAEGYLSGKKEKEASSE 108


>Medtr1g112340.2 | pyruvate carrier-like protein | HC |
           chr1:50856526-50859950 | 20130731
          Length = 108

 Score =  194 bits (494), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 89/107 (83%), Positives = 100/107 (93%), Gaps = 1/107 (0%)

Query: 3   SSFRAFLNSPIGPKTTHFWGPVANWGFVVAGLADLNKPPEMLSGNMTSAMCVYSALFMRF 62
           ++F+AF NSP+GPKTTHFWGPVANWGFV AGLAD+NKPPEM+SGNMT AMC+YSALFMRF
Sbjct: 2   AAFKAFWNSPVGPKTTHFWGPVANWGFVAAGLADINKPPEMISGNMTGAMCIYSALFMRF 61

Query: 63  AWMVQPRNYLLLACHASNETVQLYHFTRWAKSQGYLSGKKE-EASPQ 108
           AWMVQPRNYLLLACHASNETVQLY  TRWA+++GYLSGKKE EAS +
Sbjct: 62  AWMVQPRNYLLLACHASNETVQLYQHTRWARAEGYLSGKKEKEASSE 108


>Medtr2g025480.1 | light induced-like protein | HC |
           chr2:9093428-9096988 | 20130731
          Length = 106

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 3   SSFRAFLNSPIGPKTTHFWGPVANWGFVVAGLADLNKPPEMLSGNMTSAMCVYSALFMRF 62
           S  +AF N P GPKT HFW P   WG  +A +AD  KPPE LS     A+     ++ R+
Sbjct: 4   SKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTATGLIWSRY 63

Query: 63  AWMVQPRNYLLLACHASNETVQLYHFTRWAKSQGYLSGKKEE 104
           + ++ P+N+ L A + +     LY  +R  + Q Y S K  E
Sbjct: 64  STVITPKNWNLFAVNVAMAGTGLYQLSRKLR-QDYSSEKAVE 104


>Medtr2g025470.1 | light induced-like protein | HC |
          chr2:9089796-9092894 | 20130731
          Length = 106

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%)

Query: 1  MASSFRAFLNSPIGPKTTHFWGPVANWGFVVAGLADLNKPPEMLSGNMTSAMCVYSALFM 60
          ++S  +AF N PIGPKT HFW P   WG  VA +AD  KP E +S      +     ++ 
Sbjct: 2  VSSKLQAFWNHPIGPKTIHFWAPAFKWGITVANVADFTKPTEKISYPHQITVMGSGFIWA 61

Query: 61 RFAWMVQPRNYLLLACHASNETVQLYHFTR 90
          R++  + P+N+ L+  + +     LY  +R
Sbjct: 62 RYSTQIIPKNWNLVCVNLTMAGTALYQISR 91


>Medtr2g025470.3 | light induced-like protein | HC |
          chr2:9089796-9092894 | 20130731
          Length = 94

 Score = 65.9 bits (159), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%)

Query: 1  MASSFRAFLNSPIGPKTTHFWGPVANWGFVVAGLADLNKPPEMLSGNMTSAMCVYSALFM 60
          ++S  +AF N PIGPKT HFW P   WG  VA +AD  KP E +S      +     ++ 
Sbjct: 2  VSSKLQAFWNHPIGPKTIHFWAPAFKWGITVANVADFTKPTEKISYPHQITVMGSGFIWA 61

Query: 61 RFAWMVQPRNYLLLACHASNETVQLYHFTR 90
          R++  + P+N+ L+  + +     LY  +R
Sbjct: 62 RYSTQIIPKNWNLVCVNLTMAGTALYQISR 91


>Medtr7g031440.1 | transmembrane protein, putative | LC |
           chr7:10954968-10955561 | 20130731
          Length = 124

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)

Query: 45  SGNMTSAMCV-YSALFMRFAWMVQPRNYLLLACHASNETVQLYHFTRWAKSQ-GYLSGKK 102
           + N    +CV YS +FMRFAW+V+P N  LL CH SNETVQLY  +R  +SQ G L G +
Sbjct: 13  NNNRIVQVCVFYSGMFMRFAWVVKPCNIHLLVCHMSNETVQLYQLSRSIRSQRGVLEGVQ 72


>Medtr2g025470.2 | light induced-like protein | HC |
          chr2:9089796-9092894 | 20130731
          Length = 80

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query: 1  MASSFRAFLNSPIGPKTTHFWGPVANWGFVVAGLADLNKPPEMLSGNMTSAMCVYSALFM 60
          ++S  +AF N PIGPKT HFW P   WG  VA +AD  KP E +S      +     ++ 
Sbjct: 2  VSSKLQAFWNHPIGPKTIHFWAPAFKWGITVANVADFTKPTEKISYPHQITVMGSGFIWA 61

Query: 61 RFAWMVQPRNYLL 73
          R++  + P +++ 
Sbjct: 62 RYSTQIIPVSFIF 74


>Medtr2g025470.4 | light induced-like protein | HC |
          chr2:9089796-9092894 | 20130731
          Length = 80

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query: 1  MASSFRAFLNSPIGPKTTHFWGPVANWGFVVAGLADLNKPPEMLSGNMTSAMCVYSALFM 60
          ++S  +AF N PIGPKT HFW P   WG  VA +AD  KP E +S      +     ++ 
Sbjct: 2  VSSKLQAFWNHPIGPKTIHFWAPAFKWGITVANVADFTKPTEKISYPHQITVMGSGFIWA 61

Query: 61 RFAWMVQPRNYLL 73
          R++  + P +++ 
Sbjct: 62 RYSTQIIPVSFIF 74