Miyakogusa Predicted Gene
- Lj5g3v2241240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2241240.1 Non Characterized Hit- tr|I1MJ51|I1MJ51_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48606
PE,84.05,0,U520,NULL; HELICASE SKI2W,NULL; Sec63,Sec63 domain;
DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-ter,CUFF.57016.1
(953 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g064740.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 1451 0.0
Medtr4g011450.2 | U5 small nuclear ribonucleoprotein 200 kDa hel... 1404 0.0
Medtr4g011450.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 1403 0.0
Medtr3g025300.2 | U5 small nuclear ribonucleoprotein helicase | ... 719 0.0
Medtr3g025300.1 | U5 small nuclear ribonucleoprotein helicase | ... 719 0.0
Medtr2g064390.1 | U5 small nuclear ribonucleoprotein helicase | ... 577 e-164
Medtr4g008780.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 239 7e-63
Medtr7g075463.2 | ATP-binding; ATP-dependent helicase; DNA helic... 233 7e-61
Medtr7g075463.4 | ATP-binding; ATP-dependent helicase; DNA helic... 233 7e-61
Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helic... 233 1e-60
Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helic... 231 2e-60
Medtr2g030905.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 200 5e-51
Medtr4g008770.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 129 1e-29
Medtr1g008600.1 | ATP-binding; ATP-dependent helicase; DNA helic... 88 3e-17
Medtr3g462290.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein... 70 7e-12
Medtr7g080730.1 | superkiller viralicidic activity-like protein ... 67 7e-11
Medtr5g036660.1 | DEAD-box ATP-dependent RNA helicase ISE2 | HC ... 63 2e-09
Medtr5g069360.1 | DEAD/DEAH-box RNA helicase | HC | chr5:2940354... 60 1e-08
Medtr1g007510.1 | DNA polymerase theta-like protein | HC | chr1:... 59 3e-08
Medtr8g101340.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein... 57 6e-08
>Medtr2g064740.1 | U5 small nuclear ribonucleoprotein 200 kDa helicase
| HC | chr2:29260637-29270804 | 20130731
Length = 2188
Score = 1451 bits (3757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/883 (80%), Positives = 779/883 (88%), Gaps = 9/883 (1%)
Query: 75 HMLDFDTLAFHQGTGFF---RFHMPSGFFRGTMSQGYDEIHLP--DAGPFDPNEKLVKIS 129
MLD D L F QG F + +P G +R + +GY+EIH+P A P DPNEKL+KIS
Sbjct: 450 QMLDLDNLTFEQGGLFMAKKKCDLPDGSYR-HLEKGYEEIHVPALKAKPLDPNEKLLKIS 508
Query: 130 SMPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQLIAGYR 189
+MPDWAQPAFKGMT LNR+Q+KVY+TALFKP NLLLCAPTG+GK +VAVLTILQ IA +R
Sbjct: 509 AMPDWAQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHR 568
Query: 190 NQESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRDLSGDQSLTPQQIQETQ 249
N + GSIDHSAYKIVYVAPMKALVAEVVGNLSNRL + +V VR+LSGDQSLT QQI+ETQ
Sbjct: 569 NTDDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYNVTVRELSGDQSLTRQQIEETQ 628
Query: 250 ILVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVARTIRQIETTE 309
I+VTTPEKWDIITRKSGDRTYTQLVK +NRGPVLESIVART+RQIET++
Sbjct: 629 IIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLH-DNRGPVLESIVARTVRQIETSK 687
Query: 310 DNIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLYQQYAGITVTEPLQRLQL 369
D IRLVGL A LPNYEDVALFL VD + LFYFDN RPV L QQY GIT+ +PLQR QL
Sbjct: 688 DYIRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQYIGITIKKPLQRFQL 747
Query: 370 MNDICYEKIMDVAGMNRVLIFVHSRKETAKTARAIRDTVLANDTLGRLLREDSASRKILL 429
MNDICY K++DVAG ++VLIFVHSRKETAKTARAIRD LA+DTLGR L+EDSASR+IL
Sbjct: 748 MNDICYRKVLDVAGKHQVLIFVHSRKETAKTARAIRDAALADDTLGRFLKEDSASREILH 807
Query: 430 THTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQA 489
THTDLV S+DLKDLLPYGF+IHHAGMTR DRQLVEDLFADGH QVLVSTA LAWGVNL A
Sbjct: 808 THTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNLPA 867
Query: 490 QTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIIITGFSELEYYISIM 549
TVIIKGTQIYNPEKGAWTELSPL+VMQMLGRAGR Q+ S+GEGII+TG SEL+YY+S+M
Sbjct: 868 HTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQYYLSLM 927
Query: 550 NEQLPIESQFVSKLADQLNAEIVLGTVHNAREACNWIGYTYLYARMLRNPSLYGLAPDIL 609
N+QLPIESQF+SKLADQLNAEIVLGTV NA+EAC+WIGYTYLY RMLRNPSLYGLAPD+L
Sbjct: 928 NQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYGLAPDVL 987
Query: 610 TRDITLEERRADLIHTAATILDKNNLVKYDRQSGSFHVTDLGRIASYYYITHGTISMYNE 669
+RDITLEERRADLIHTAATILD+NNLVKYDR+SG F VTDLGRIASYYYITHGTIS YNE
Sbjct: 988 SRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNE 1047
Query: 670 HLKPTMGYIELCRLFSLSEEFKYVTVRQDEKMELAKLLKHVSIPIKESLEEPSAKINILL 729
HLKPTMG IELCRLFSLSEEFKYVTVRQDEKMELAKLL V IPIKESLEEPSAKIN+LL
Sbjct: 1048 HLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLL 1107
Query: 730 QAYISQLKVEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQSAEKALNLFKMVTKK-- 787
QAYISQLK+EGLS+TSDMVFITQSAGRLLRALFEIVLKRGWAQ AEKALNL KMVTK+
Sbjct: 1108 QAYISQLKLEGLSMTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMW 1167
Query: 788 SVQTPLRQFNGIPSYILTKMEKKDLAWERYYDLSSQELAELIPAHKMGRTLHKLIHQFPK 847
SVQTPLRQFNGIPS +LTK+EKKDLAWERYYDLSSQE+ ELI A KMGRTLH+ IHQFPK
Sbjct: 1168 SVQTPLRQFNGIPSDVLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHRFIHQFPK 1227
Query: 848 LNLEAHIESITCTVLRVELTLTPDFAWDDRVHGNVEPFWVIVEDNDGEYILHHEYFMLKK 907
LNL AH++ IT TVL VELT+TPDFAWDDR+HG VEPFWVIVEDNDGEYILHHEYF+LKK
Sbjct: 1228 LNLAAHVQPITRTVLGVELTITPDFAWDDRMHGYVEPFWVIVEDNDGEYILHHEYFLLKK 1287
Query: 908 QDISEDHTLNFVVPISQPLPPQFLIRVVSDRWLGSQTVLPVSL 950
Q I EDHTLNF VPI +PLPPQ+ IRVVSD+WLGSQTVLPVS
Sbjct: 1288 QYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSF 1330
Score = 263 bits (673), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 198/685 (28%), Positives = 336/685 (49%), Gaps = 33/685 (4%)
Query: 113 LPDAGPFDPNEKLVKISSMPDWA--QPAFKGM----THLNRIQTKVYDTALFKPHNLLLC 166
LP+ P P +L+ + +P A P+++ + H N +QT+V+ N+L+
Sbjct: 1335 LPEKYP--PPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVA 1392
Query: 167 APTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLHE 226
APTGSGK A IL RN + + S ++VY+AP++AL E + +
Sbjct: 1393 APTGSGKTICAEFAIL------RNHQK--LPDSVMRVVYIAPVEALAKERYRDWEKKFGG 1444
Query: 227 N-DVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXX 285
+KV +L+G+ + + +++ Q++++TPEKWD ++R+ R + Q V
Sbjct: 1445 GLKLKVVELTGETATDLKLLEKGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLI 1504
Query: 286 XXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNELFYFDND 345
GPVLE IV+R E+ IR+V L +L N +D+ ++ + LF F
Sbjct: 1505 GGQG-GPVLEVIVSRMRYISSQLENKIRIVALSTSLANAKDLGEWIGA-TSHGLFNFPPG 1562
Query: 346 DRPVHLYQQYAGITVTEPLQRLQLMNDICYEKIMDVAGMNR-VLIFVHSRKETAKTARAI 404
RPV L G+ + R+Q M Y I A + ++FV +RK TA +
Sbjct: 1563 VRPVPLEIHIQGVDIANFEARMQAMTKPTYTSIAQHAKNKKPAIVFVPTRKHVRLTAVDL 1622
Query: 405 RDTVLANDTLGR--LLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQL 462
T D+ + LLR S + L + ++ LK L G H G+ D +
Sbjct: 1623 I-TYSGADSGEKPFLLR----SLEELEPFINKISDEMLKVTLREGVGYLHEGLNSLDHDI 1677
Query: 463 VEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRA 522
V LF G +QV V ++++ WGV L A V++ GTQ Y+ + A T+ +++QM+G A
Sbjct: 1678 VAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHA 1737
Query: 523 GRSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHNAREA 582
R + G+ +I+ EYY + E P+ES L D LNAEIV G + N ++A
Sbjct: 1738 SRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDA 1797
Query: 583 CNWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNNLVKYDRQS 642
+++ +T++Y R+ +NP+ Y L L + ++++ + L+ + V +
Sbjct: 1798 VDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEMVENTLSDLEASKCVSIE-DD 1853
Query: 643 GSFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELCRLFSLSEEFKYVTVRQDEKME 702
+LG IASYYYI++ TI ++ L L + S + E+ ++ +R E+
Sbjct: 1854 MDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYAHLPIRPGEEEV 1913
Query: 703 LAKLLKHVSIPIKE-SLEEPSAKINILLQAYISQLKVEGLSLTSDMVFITQSAGRLLRAL 761
+ +L+ H + + +P K N LLQA+ S+ V G +L+ D + SA RLL+A+
Sbjct: 1914 VRRLINHQRFSFENPKVTDPHVKANALLQAHFSRQSVGG-NLSLDQREVLLSANRLLQAM 1972
Query: 762 FEIVLKRGWAQSAEKALNLFKMVTK 786
+++ GW A A+ + +MVT+
Sbjct: 1973 VDVISSNGWLSMALLAMEVSQMVTQ 1997
>Medtr4g011450.2 | U5 small nuclear ribonucleoprotein 200 kDa helicase
| HC | chr4:2793467-2800740 | 20130731
Length = 2072
Score = 1404 bits (3633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/882 (78%), Positives = 762/882 (86%), Gaps = 9/882 (1%)
Query: 76 MLDFDTLAFHQGTGFF---RFHMPSGFFRGTMSQGYDEIHLP--DAGPFDPNEKLVKISS 130
MLD D LAF QG F + +P G +R +GY EIH+P A P DPNEKLV I
Sbjct: 406 MLDLDNLAFEQGGLFMTKGKCDLPDGSYR-LPRKGYQEIHVPALKAKPIDPNEKLVNIGY 464
Query: 131 MPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQLIAGYRN 190
MPDWAQPAFKGM LNR+Q+KVY+TALFK NLLLCAPTG+GK +VAVLTILQ IA +RN
Sbjct: 465 MPDWAQPAFKGMIQLNRVQSKVYETALFKSDNLLLCAPTGAGKTNVAVLTILQEIARHRN 524
Query: 191 QESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRDLSGDQSLTPQQIQETQI 250
GSIDHSAYKIVYVAPMKALV E+VGNLSNRL E DVKVR+LSGDQSLT +Q++ETQI
Sbjct: 525 PGDGSIDHSAYKIVYVAPMKALVTEIVGNLSNRLQEYDVKVRELSGDQSLTQKQMEETQI 584
Query: 251 LVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVARTIRQIETTED 310
+VTTPEKWDIITRKSGDR YTQLVK +NRGPVLESI+ART+RQIETT+D
Sbjct: 585 IVTTPEKWDIITRKSGDRIYTQLVKLLIIDEIHLLH-DNRGPVLESIIARTVRQIETTKD 643
Query: 311 NIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLYQQYAGITVTEPLQRLQLM 370
IRLVGL A LPN+EDVA FL VD + LFYFDN RPV L QQ+ GITV +P QR QLM
Sbjct: 644 YIRLVGLSATLPNFEDVARFLRVDHNKGLFYFDNSYRPVPLSQQFIGITVKKPFQRYQLM 703
Query: 371 NDICYEKIMDVAGMNRVLIFVHSRKETAKTARAIRDTVLANDTLGRLLREDSASRKILLT 430
NDIC+EK+M AG ++VLIFVHSRKETAKTARAIRDT LANDTLGR L+EDSASR+IL +
Sbjct: 704 NDICFEKVMAEAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHS 763
Query: 431 HTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQ 490
HTDLV SNDLKDLLPYGF+IHHAGMTR DRQLVEDLFA GHVQVLVSTA LAWGVNL A
Sbjct: 764 HTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFASGHVQVLVSTATLAWGVNLPAH 823
Query: 491 TVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIIITGFSELEYYISIMN 550
TVIIKGT+IYNPE+GAWTELSPL+VMQMLGRAGR Q+ S G GI++TG SEL+YY+S+MN
Sbjct: 824 TVIIKGTKIYNPERGAWTELSPLDVMQMLGRAGRPQYDSCGMGIVVTGHSELQYYLSLMN 883
Query: 551 EQLPIESQFVSKLADQLNAEIVLGTVHNAREACNWIGYTYLYARMLRNPSLYGLAPDILT 610
+QLPIESQF+SKLADQLNAEIVLGTV NA+EACNWIGYTYLY RM RNPSLYGLAPD++
Sbjct: 884 QQLPIESQFISKLADQLNAEIVLGTVQNAKEACNWIGYTYLYVRMSRNPSLYGLAPDVVM 943
Query: 611 RDITLEERRADLIHTAATILDKNNLVKYDRQSGSFHVTDLGRIASYYYITHGTISMYNEH 670
RDITLEERRADLIH+AATILD+NNLVKYDR+SG F TDLGRIASYYYITHGTIS YNEH
Sbjct: 944 RDITLEERRADLIHSAATILDRNNLVKYDRKSGYFQATDLGRIASYYYITHGTISTYNEH 1003
Query: 671 LKPTMGYIELCRLFSLSEEFKYVTVRQDEKMELAKLLKHVSIPIKESLEEPSAKINILLQ 730
LK +MG IEL +LFSLSEEFKYVTVRQDEK+ELAKLL V IP+KESLE+PSAKIN+LLQ
Sbjct: 1004 LKASMGNIELSQLFSLSEEFKYVTVRQDEKIELAKLLDRVPIPVKESLEDPSAKINVLLQ 1063
Query: 731 AYISQLKVEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQSAEKALNLFKMVTKK--S 788
+YISQLK+EGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQ AEKALNL+KMVTK+ S
Sbjct: 1064 SYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLYKMVTKRMWS 1123
Query: 789 VQTPLRQFNGIPSYILTKMEKKDLAWERYYDLSSQELAELIPAHKMGRTLHKLIHQFPKL 848
QTPLRQFNGIP+ ILTK+EKK+LAWE+YYDLSSQE+ ELI A KMGR LHK IHQFPKL
Sbjct: 1124 AQTPLRQFNGIPNDILTKLEKKNLAWEKYYDLSSQEIGELIRAPKMGRILHKFIHQFPKL 1183
Query: 849 NLEAHIESITCTVLRVELTLTPDFAWDDRVHGNVEPFWVIVEDNDGEYILHHEYFMLKKQ 908
NL AH++ ITC+VL VELT+TPDF+WDDRVHG VEPFWVIVEDNDGE ILHHEYFMLKKQ
Sbjct: 1184 NLAAHVQPITCSVLGVELTITPDFSWDDRVHGCVEPFWVIVEDNDGENILHHEYFMLKKQ 1243
Query: 909 DISEDHTLNFVVPISQPLPPQFLIRVVSDRWLGSQTVLPVSL 950
I E+HTLNF+VPI +PLPPQ+ IRVVSDRWLGSQTVLPVS
Sbjct: 1244 YIDENHTLNFIVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSF 1285
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 181/691 (26%), Positives = 306/691 (44%), Gaps = 90/691 (13%)
Query: 108 YDEIHLPDAGPFDPNEKLVKISSMPDWA--QPAFKGM----THLNRIQTKVYDTALFKPH 161
+ I LP+ P P +L+ + +P A P+++ + H N IQT+V+ TAL+
Sbjct: 1285 FRHIILPEKYP--PPTELLDLQPLPVTALQSPSYETLYQDFKHFNPIQTQVF-TALYNSD 1341
Query: 162 -NLLLCAPTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNL 220
N L+ APTGS AP++AL E +
Sbjct: 1342 DNALVAAPTGS-----------------------------------APIEALAKERYRDW 1366
Query: 221 SNRLHEN-DVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXXX 279
+ V +L+G+ + + +++ QI+++TPEKWD ++R+ R + Q V
Sbjct: 1367 EKKFGGGLKFAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFII 1426
Query: 280 XXXXXXXXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNEL 339
RG VLE IV+R E+ IR V L ++ N +D+ ++ + L
Sbjct: 1427 DELHLIG-GQRGSVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDWIGA-TSHGL 1484
Query: 340 FYFDNDDRPVHLYQQYAGITVTEPLQRLQLMNDICYEKIMDVAGMNR-VLIFVHSRKETA 398
F F RPV L + + R+Q M Y I A + L+FV +RK
Sbjct: 1485 FNFSPVVRPVPLEIHIQSVDIANFKARMQAMTKRTYTAIAQHAKNGKPALVFVPTRKHVR 1544
Query: 399 KTARAIRDTVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRA 458
T + A+ L + S K L + ++ LK L G H G++
Sbjct: 1545 LTTMDLITYSSADSGEKSFLLQ---STKELEPFLNKISDEMLKVTLREGVGYLHEGLSSL 1601
Query: 459 DRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQM 518
D +V LF G +QV V ++++ + V L A V++ GT Y+ E A T+ +++QM
Sbjct: 1602 DHDIVAQLFEAGWIQVCVLSSSMCYIVTLLAHLVVVMGTLYYDGE-NAQTDYPVTDLLQM 1660
Query: 519 LGRAGRSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHN 578
+G A R G+ +I+ EYY + E P+ES L D LNAEIV G + N
Sbjct: 1661 MGHASRPLVDHSGKCVILCHAPSKEYYKKFLFEAFPVESHLHHFLHDNLNAEIVAGIIEN 1720
Query: 579 AREACNWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNNLVKY 638
++ +++ +T++Y R+ +NP+ Y L L + ++L+ + L+ + V
Sbjct: 1721 KQDVVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDYLSELVENTLSDLEASKCVSI 1777
Query: 639 DRQSGSFHVT--DLGRIASYYYITHGTISMYNEHLKPTMGYIELCRLFSLSEEFKYVTVR 696
+ H++ +LG I+SYY IT E+ Y+ +
Sbjct: 1778 E---DDIHLSPLNLGMISSYYNIT---------------------------SEYAYLPIL 1807
Query: 697 QDEKMELAKLLKHVSIPIKE-SLEEPSAKINILLQAYISQLKVEGLSLTSDMVFITQSAG 755
E+ + +L+ H+ + +++P K N LLQA+ S V G +L D + SA
Sbjct: 1808 PGEEEVVRRLINHLRFSFESPKVKDPHVKANALLQAHFSWQFVGG-NLALDQREVLLSAN 1866
Query: 756 RLLRALFEIVLKRGWAQSAEKALNLFKMVTK 786
+LL+AL +++ GW A A+ + +M+T+
Sbjct: 1867 KLLQALVDVISSNGWLSLALLAMEVSQMLTQ 1897
>Medtr4g011450.1 | U5 small nuclear ribonucleoprotein 200 kDa helicase
| HC | chr4:2793467-2800896 | 20130731
Length = 2099
Score = 1403 bits (3632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/882 (78%), Positives = 762/882 (86%), Gaps = 9/882 (1%)
Query: 76 MLDFDTLAFHQGTGFF---RFHMPSGFFRGTMSQGYDEIHLP--DAGPFDPNEKLVKISS 130
MLD D LAF QG F + +P G +R +GY EIH+P A P DPNEKLV I
Sbjct: 406 MLDLDNLAFEQGGLFMTKGKCDLPDGSYR-LPRKGYQEIHVPALKAKPIDPNEKLVNIGY 464
Query: 131 MPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQLIAGYRN 190
MPDWAQPAFKGM LNR+Q+KVY+TALFK NLLLCAPTG+GK +VAVLTILQ IA +RN
Sbjct: 465 MPDWAQPAFKGMIQLNRVQSKVYETALFKSDNLLLCAPTGAGKTNVAVLTILQEIARHRN 524
Query: 191 QESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRDLSGDQSLTPQQIQETQI 250
GSIDHSAYKIVYVAPMKALV E+VGNLSNRL E DVKVR+LSGDQSLT +Q++ETQI
Sbjct: 525 PGDGSIDHSAYKIVYVAPMKALVTEIVGNLSNRLQEYDVKVRELSGDQSLTQKQMEETQI 584
Query: 251 LVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVARTIRQIETTED 310
+VTTPEKWDIITRKSGDR YTQLVK +NRGPVLESI+ART+RQIETT+D
Sbjct: 585 IVTTPEKWDIITRKSGDRIYTQLVKLLIIDEIHLLH-DNRGPVLESIIARTVRQIETTKD 643
Query: 311 NIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLYQQYAGITVTEPLQRLQLM 370
IRLVGL A LPN+EDVA FL VD + LFYFDN RPV L QQ+ GITV +P QR QLM
Sbjct: 644 YIRLVGLSATLPNFEDVARFLRVDHNKGLFYFDNSYRPVPLSQQFIGITVKKPFQRYQLM 703
Query: 371 NDICYEKIMDVAGMNRVLIFVHSRKETAKTARAIRDTVLANDTLGRLLREDSASRKILLT 430
NDIC+EK+M AG ++VLIFVHSRKETAKTARAIRDT LANDTLGR L+EDSASR+IL +
Sbjct: 704 NDICFEKVMAEAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHS 763
Query: 431 HTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQ 490
HTDLV SNDLKDLLPYGF+IHHAGMTR DRQLVEDLFA GHVQVLVSTA LAWGVNL A
Sbjct: 764 HTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFASGHVQVLVSTATLAWGVNLPAH 823
Query: 491 TVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIIITGFSELEYYISIMN 550
TVIIKGT+IYNPE+GAWTELSPL+VMQMLGRAGR Q+ S G GI++TG SEL+YY+S+MN
Sbjct: 824 TVIIKGTKIYNPERGAWTELSPLDVMQMLGRAGRPQYDSCGMGIVVTGHSELQYYLSLMN 883
Query: 551 EQLPIESQFVSKLADQLNAEIVLGTVHNAREACNWIGYTYLYARMLRNPSLYGLAPDILT 610
+QLPIESQF+SKLADQLNAEIVLGTV NA+EACNWIGYTYLY RM RNPSLYGLAPD++
Sbjct: 884 QQLPIESQFISKLADQLNAEIVLGTVQNAKEACNWIGYTYLYVRMSRNPSLYGLAPDVVM 943
Query: 611 RDITLEERRADLIHTAATILDKNNLVKYDRQSGSFHVTDLGRIASYYYITHGTISMYNEH 670
RDITLEERRADLIH+AATILD+NNLVKYDR+SG F TDLGRIASYYYITHGTIS YNEH
Sbjct: 944 RDITLEERRADLIHSAATILDRNNLVKYDRKSGYFQATDLGRIASYYYITHGTISTYNEH 1003
Query: 671 LKPTMGYIELCRLFSLSEEFKYVTVRQDEKMELAKLLKHVSIPIKESLEEPSAKINILLQ 730
LK +MG IEL +LFSLSEEFKYVTVRQDEK+ELAKLL V IP+KESLE+PSAKIN+LLQ
Sbjct: 1004 LKASMGNIELSQLFSLSEEFKYVTVRQDEKIELAKLLDRVPIPVKESLEDPSAKINVLLQ 1063
Query: 731 AYISQLKVEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQSAEKALNLFKMVTKK--S 788
+YISQLK+EGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQ AEKALNL+KMVTK+ S
Sbjct: 1064 SYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLYKMVTKRMWS 1123
Query: 789 VQTPLRQFNGIPSYILTKMEKKDLAWERYYDLSSQELAELIPAHKMGRTLHKLIHQFPKL 848
QTPLRQFNGIP+ ILTK+EKK+LAWE+YYDLSSQE+ ELI A KMGR LHK IHQFPKL
Sbjct: 1124 AQTPLRQFNGIPNDILTKLEKKNLAWEKYYDLSSQEIGELIRAPKMGRILHKFIHQFPKL 1183
Query: 849 NLEAHIESITCTVLRVELTLTPDFAWDDRVHGNVEPFWVIVEDNDGEYILHHEYFMLKKQ 908
NL AH++ ITC+VL VELT+TPDF+WDDRVHG VEPFWVIVEDNDGE ILHHEYFMLKKQ
Sbjct: 1184 NLAAHVQPITCSVLGVELTITPDFSWDDRVHGCVEPFWVIVEDNDGENILHHEYFMLKKQ 1243
Query: 909 DISEDHTLNFVVPISQPLPPQFLIRVVSDRWLGSQTVLPVSL 950
I E+HTLNF+VPI +PLPPQ+ IRVVSDRWLGSQTVLPVS
Sbjct: 1244 YIDENHTLNFIVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSF 1285
Score = 221 bits (564), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 193/691 (27%), Positives = 320/691 (46%), Gaps = 63/691 (9%)
Query: 108 YDEIHLPDAGPFDPNEKLVKISSMPDWA------QPAFKGMTHLNRIQTKVYDTALFKPH 161
+ I LP+ P P +L+ + +P A + ++ H N IQT+V+ TAL+
Sbjct: 1285 FRHIILPEKYP--PPTELLDLQPLPVTALQSPSYETLYQDFKHFNPIQTQVF-TALYNSD 1341
Query: 162 -NLLLCAPTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNL 220
N L+ APTGSGK A IL RN + GS S ++VYVAP++AL E +
Sbjct: 1342 DNALVAAPTGSGKTICAEFAIL------RNHKKGS--DSVMRVVYVAPIEALAKERYRDW 1393
Query: 221 SNRLHEN-DVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXXX 279
+ V +L+G+ + + +++ QI+++TPEKWD ++R+ R + Q V
Sbjct: 1394 EKKFGGGLKFAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFII 1453
Query: 280 XXXXXXXXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNEL 339
RG VLE IV+R E+ IR V L ++ N +D+ ++ + L
Sbjct: 1454 DELHLIG-GQRGSVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDWIGA-TSHGL 1511
Query: 340 FYFDNDDRPVHLYQQYAGITVTEPLQRLQLMNDICYEKIMDVAGMNR-VLIFVHSRKETA 398
F F RPV L + + R+Q M Y I A + L+FV +RK
Sbjct: 1512 FNFSPVVRPVPLEIHIQSVDIANFKARMQAMTKRTYTAIAQHAKNGKPALVFVPTRKHVR 1571
Query: 399 KTARAIRDTVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRA 458
T + A+ L + S K L + ++ LK L G H G++
Sbjct: 1572 LTTMDLITYSSADSGEKSFLLQ---STKELEPFLNKISDEMLKVTLREGVGYLHEGLSSL 1628
Query: 459 DRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQM 518
D +V LF G +QV V ++++ + V L A V++ GT Y+ E A T+ +++QM
Sbjct: 1629 DHDIVAQLFEAGWIQVCVLSSSMCYIVTLLAHLVVVMGTLYYDGE-NAQTDYPVTDLLQM 1687
Query: 519 LGRAGRSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHN 578
+G A R G+ +I+ EYY + E P+ES L D LNAEIV G + N
Sbjct: 1688 MGHASRPLVDHSGKCVILCHAPSKEYYKKFLFEAFPVESHLHHFLHDNLNAEIVAGIIEN 1747
Query: 579 AREACNWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNNLVKY 638
++ +++ +T++Y R+ +NP+ Y L L + ++L+ + L+ + V
Sbjct: 1748 KQDVVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDYLSELVENTLSDLEASKCVSI 1804
Query: 639 DRQSGSFHVT--DLGRIASYYYITHGTISMYNEHLKPTMGYIELCRLFSLSEEFKYVTVR 696
+ H++ +LG I+SYY IT E+ Y+ +
Sbjct: 1805 E---DDIHLSPLNLGMISSYYNIT---------------------------SEYAYLPIL 1834
Query: 697 QDEKMELAKLLKHVSIPIKE-SLEEPSAKINILLQAYISQLKVEGLSLTSDMVFITQSAG 755
E+ + +L+ H+ + +++P K N LLQA+ S V G +L D + SA
Sbjct: 1835 PGEEEVVRRLINHLRFSFESPKVKDPHVKANALLQAHFSWQFVGG-NLALDQREVLLSAN 1893
Query: 756 RLLRALFEIVLKRGWAQSAEKALNLFKMVTK 786
+LL+AL +++ GW A A+ + +M+T+
Sbjct: 1894 KLLQALVDVISSNGWLSLALLAMEVSQMLTQ 1924
>Medtr3g025300.2 | U5 small nuclear ribonucleoprotein helicase | HC |
chr3:7719529-7695186 | 20130731
Length = 1734
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/866 (43%), Positives = 547/866 (63%), Gaps = 16/866 (1%)
Query: 95 MPSGFFRGTMSQGYDEIHLPD--AGPFDPNEKLVKISSMPDWAQPAFKGMTHLNRIQTKV 152
+P G R +GY+E+ +P P P EKL++I + D+AQ AF+G LNRIQ+++
Sbjct: 387 LPEGTIR-KYREGYEEVIIPPKPTAPMKPGEKLIEIRELDDFAQAAFRGYKSLNRIQSRI 445
Query: 153 YDTALFKPHNLLLCAPTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKAL 212
Y T N+L+CAPTG+GK ++A+++IL I ++ + G + +KIVYVAPMKAL
Sbjct: 446 YQTVYGTNENILVCAPTGAGKTNIAMISILHEIG--QHFKDGYLHKDKFKIVYVAPMKAL 503
Query: 213 VAEVVGNLSNRLHENDVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQ 272
AEV S RL ++ VR+L+GD L+ +++ETQ++VTTPEKWD+ITRKS D + +
Sbjct: 504 AAEVTSTFSQRLSPLNMSVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSM 563
Query: 273 LVKXXXXXXXXXXXXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLC 332
LVK ++RGPV+E++VART+RQ+E+++ IR+VGL A LPNY +VA FL
Sbjct: 564 LVKLLIIDEVHLLN-DDRGPVIEALVARTLRQVESSQSMIRIVGLSATLPNYLEVAQFLR 622
Query: 333 VDPDNELFYFDNDDRPVHLYQQYAGITVTEPLQRLQLMNDICYEKIMD-VAGMNRVLIFV 391
V+PD LF+FD+ RPV L QQY GI+ R +L+N ICY K+ D + ++ ++FV
Sbjct: 623 VNPDTGLFFFDSSYRPVPLAQQYIGISEPNFAARNELLNVICYRKVADSIRQGHQAMVFV 682
Query: 392 HSRKETAKTARAIRDTVLANDTLGRLLREDSASRKILLTHTDLVNSN-DLKDLLPYGFSI 450
HSRK+TAKTA+ + + AND L L D+ + + + N DL L G I
Sbjct: 683 HSRKDTAKTAQKLTELARANDDL-ELFNNDTHPHYFFMKKEVVKSRNKDLVQLFELGMGI 741
Query: 451 HHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTEL 510
HHAGM R+DR L E LF++G ++VLV TA LAWGVNL A TV+IKGTQIY+P+ G W +L
Sbjct: 742 HHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDL 801
Query: 511 SPLEVMQMLGRAGRSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAE 570
L+VMQ+ GRAGR QF GEGIIIT +L YY+ ++ QLPIESQF+S L D LNAE
Sbjct: 802 GMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAE 861
Query: 571 IVLGTVHNAREACNWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATIL 630
+ LGTV N +EAC W+GYTYL+ RM NP YG+ D + D L ++ L+ AA L
Sbjct: 862 VALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPALSSKQRSLVIDAARSL 921
Query: 631 DKNNLVKYDRQSGSFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELCRLFSLSEEF 690
DK ++++D +SG+F+ T+LGRIAS++YI + ++ YNE L+ M E+ + + S EF
Sbjct: 922 DKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVINMVAHSSEF 981
Query: 691 KYVTVRQDEKMELAKLLKHVSIP--IKESLEEPSAKINILLQAYISQLKVEGLSLTSDMV 748
+ + VR++E+ EL L + S P IK KI+IL+Q YIS+ ++ SL SD
Sbjct: 982 ENIAVREEEQNELETLAR-TSCPLEIKGGPSNKHGKISILIQLYISRGSIDSFSLISDAS 1040
Query: 749 FITQSAGRLLRALFEIVLKRGWAQSAEKALNLFKMVTKK--SVQTPLRQFN-GIPSYILT 805
+I+ S R++RALFEI L+RGW + + L K V ++ Q PLRQF+ + IL
Sbjct: 1041 YISASLARIMRALFEICLRRGWCEMSLFMLEYCKAVDRQVWPHQHPLRQFDRDLSGEILR 1100
Query: 806 KMEKKDLAWERYYDLSSQELAELIPAHKMGRTLHKLIHQFPKLNLEAHIESITCTVLRVE 865
K+E++ + ++ +++ LI GR + + + FP L L A + IT TVL+++
Sbjct: 1101 KLEERGADLDHLMEMEEKDIGALIRYAPGGRLVKQYLGYFPSLQLSATVSPITRTVLKID 1160
Query: 866 LTLTPDFAWDDRVHGNVEPFWVIVEDNDGEYILHHEYFML-KKQDISEDHTLNFVVPISQ 924
L +TP F W DR HG + +W++VED++ ++I H E L K+ E + L+F VPI +
Sbjct: 1161 LVITPAFIWKDRFHGTAQRWWILVEDSENDHIYHSELLTLTKRMAKGEPYKLSFTVPIFE 1220
Query: 925 PLPPQFLIRVVSDRWLGSQTVLPVSL 950
P PPQ+ I +SD WL ++ ++
Sbjct: 1221 PHPPQYYIHAISDSWLHAEAFYTITF 1246
Score = 253 bits (645), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 251/479 (52%), Gaps = 16/479 (3%)
Query: 124 KLVKISSMPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQ 183
K + +SS+ + +H N IQT+ + +N+LL APTGSGK A L +L+
Sbjct: 1265 KPLPVSSLGNIDHEGLYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAELAMLR 1324
Query: 184 LIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRL-HENDVKVRDLSGDQSLTP 242
L + Q K++Y+AP+KA+V E + + RL + K+ +++GD +
Sbjct: 1325 L---FNTQPD-------MKVIYIAPLKAIVRERMSDWRKRLVSQLGKKMVEMTGDYTPDL 1374
Query: 243 QQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVARTI 302
+ I+++TPEKWD I+R R+Y V + RGP+LE IV+R
Sbjct: 1375 MALLSANIIISTPEKWDGISRNWHSRSYVTKVGLIILDEIHLLGAD-RGPILEVIVSRMR 1433
Query: 303 RQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLYQQYAGITVTE 362
TE +R VGL L N D+A +L V+ + LF F RPV L G
Sbjct: 1434 YISSQTERPVRFVGLSTALANAGDLADWLGVE-EIGLFNFKPSVRPVPLEVHIQGYPGKY 1492
Query: 363 PLQRLQLMNDICYEKIMDVAGMNRVLIFVHSRKETAKTARAIRDTVLANDTLGRLLREDS 422
R+ MN Y I + VLIFV SR++T TA + +++ + L
Sbjct: 1493 YCPRMNSMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAASDEHSRQFLNMPE 1552
Query: 423 ASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALA 482
+ ++ L+ V+ +L+ L +G +HHAG+ DR LVE+LFA+ +QVLV T+ LA
Sbjct: 1553 EALEMFLSQ---VSDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1609
Query: 483 WGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIIITGFSEL 542
WGVNL A VIIKGT+ Y+ + + + +++QM+GRAGR QF G+ +I+ +
Sbjct: 1610 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKK 1669
Query: 543 EYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHNAREACNWIGYTYLYARMLRNPSL 601
+Y + E P+ES +L D +NAEIV GT+ N ++A +++ +TYL+ R+ N +
Sbjct: 1670 SFYKKFLYEPFPVESSLRERLHDHINAEIVSGTICNKQDAVHYLTWTYLFRRLEGNSRM 1728
>Medtr3g025300.1 | U5 small nuclear ribonucleoprotein helicase | HC |
chr3:7719529-7688875 | 20130731
Length = 2081
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/866 (43%), Positives = 547/866 (63%), Gaps = 16/866 (1%)
Query: 95 MPSGFFRGTMSQGYDEIHLPD--AGPFDPNEKLVKISSMPDWAQPAFKGMTHLNRIQTKV 152
+P G R +GY+E+ +P P P EKL++I + D+AQ AF+G LNRIQ+++
Sbjct: 387 LPEGTIR-KYREGYEEVIIPPKPTAPMKPGEKLIEIRELDDFAQAAFRGYKSLNRIQSRI 445
Query: 153 YDTALFKPHNLLLCAPTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKAL 212
Y T N+L+CAPTG+GK ++A+++IL I ++ + G + +KIVYVAPMKAL
Sbjct: 446 YQTVYGTNENILVCAPTGAGKTNIAMISILHEIG--QHFKDGYLHKDKFKIVYVAPMKAL 503
Query: 213 VAEVVGNLSNRLHENDVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQ 272
AEV S RL ++ VR+L+GD L+ +++ETQ++VTTPEKWD+ITRKS D + +
Sbjct: 504 AAEVTSTFSQRLSPLNMSVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSM 563
Query: 273 LVKXXXXXXXXXXXXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLC 332
LVK ++RGPV+E++VART+RQ+E+++ IR+VGL A LPNY +VA FL
Sbjct: 564 LVKLLIIDEVHLLN-DDRGPVIEALVARTLRQVESSQSMIRIVGLSATLPNYLEVAQFLR 622
Query: 333 VDPDNELFYFDNDDRPVHLYQQYAGITVTEPLQRLQLMNDICYEKIMD-VAGMNRVLIFV 391
V+PD LF+FD+ RPV L QQY GI+ R +L+N ICY K+ D + ++ ++FV
Sbjct: 623 VNPDTGLFFFDSSYRPVPLAQQYIGISEPNFAARNELLNVICYRKVADSIRQGHQAMVFV 682
Query: 392 HSRKETAKTARAIRDTVLANDTLGRLLREDSASRKILLTHTDLVNSN-DLKDLLPYGFSI 450
HSRK+TAKTA+ + + AND L L D+ + + + N DL L G I
Sbjct: 683 HSRKDTAKTAQKLTELARANDDL-ELFNNDTHPHYFFMKKEVVKSRNKDLVQLFELGMGI 741
Query: 451 HHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTEL 510
HHAGM R+DR L E LF++G ++VLV TA LAWGVNL A TV+IKGTQIY+P+ G W +L
Sbjct: 742 HHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDL 801
Query: 511 SPLEVMQMLGRAGRSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAE 570
L+VMQ+ GRAGR QF GEGIIIT +L YY+ ++ QLPIESQF+S L D LNAE
Sbjct: 802 GMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAE 861
Query: 571 IVLGTVHNAREACNWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATIL 630
+ LGTV N +EAC W+GYTYL+ RM NP YG+ D + D L ++ L+ AA L
Sbjct: 862 VALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPALSSKQRSLVIDAARSL 921
Query: 631 DKNNLVKYDRQSGSFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELCRLFSLSEEF 690
DK ++++D +SG+F+ T+LGRIAS++YI + ++ YNE L+ M E+ + + S EF
Sbjct: 922 DKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVINMVAHSSEF 981
Query: 691 KYVTVRQDEKMELAKLLKHVSIP--IKESLEEPSAKINILLQAYISQLKVEGLSLTSDMV 748
+ + VR++E+ EL L + S P IK KI+IL+Q YIS+ ++ SL SD
Sbjct: 982 ENIAVREEEQNELETLAR-TSCPLEIKGGPSNKHGKISILIQLYISRGSIDSFSLISDAS 1040
Query: 749 FITQSAGRLLRALFEIVLKRGWAQSAEKALNLFKMVTKK--SVQTPLRQFN-GIPSYILT 805
+I+ S R++RALFEI L+RGW + + L K V ++ Q PLRQF+ + IL
Sbjct: 1041 YISASLARIMRALFEICLRRGWCEMSLFMLEYCKAVDRQVWPHQHPLRQFDRDLSGEILR 1100
Query: 806 KMEKKDLAWERYYDLSSQELAELIPAHKMGRTLHKLIHQFPKLNLEAHIESITCTVLRVE 865
K+E++ + ++ +++ LI GR + + + FP L L A + IT TVL+++
Sbjct: 1101 KLEERGADLDHLMEMEEKDIGALIRYAPGGRLVKQYLGYFPSLQLSATVSPITRTVLKID 1160
Query: 866 LTLTPDFAWDDRVHGNVEPFWVIVEDNDGEYILHHEYFML-KKQDISEDHTLNFVVPISQ 924
L +TP F W DR HG + +W++VED++ ++I H E L K+ E + L+F VPI +
Sbjct: 1161 LVITPAFIWKDRFHGTAQRWWILVEDSENDHIYHSELLTLTKRMAKGEPYKLSFTVPIFE 1220
Query: 925 PLPPQFLIRVVSDRWLGSQTVLPVSL 950
P PPQ+ I +SD WL ++ ++
Sbjct: 1221 PHPPQYYIHAISDSWLHAEAFYTITF 1246
Score = 328 bits (841), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 240/842 (28%), Positives = 411/842 (48%), Gaps = 57/842 (6%)
Query: 124 KLVKISSMPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQ 183
K + +SS+ + +H N IQT+ + +N+LL APTGSGK A L +L+
Sbjct: 1265 KPLPVSSLGNIDHEGLYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAELAMLR 1324
Query: 184 LIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRL-HENDVKVRDLSGDQSLTP 242
L + Q K++Y+AP+KA+V E + + RL + K+ +++GD +
Sbjct: 1325 L---FNTQPD-------MKVIYIAPLKAIVRERMSDWRKRLVSQLGKKMVEMTGDYTPDL 1374
Query: 243 QQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVARTI 302
+ I+++TPEKWD I+R R+Y V + RGP+LE IV+R
Sbjct: 1375 MALLSANIIISTPEKWDGISRNWHSRSYVTKVGLIILDEIHLLGAD-RGPILEVIVSRMR 1433
Query: 303 RQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLYQQYAGITVTE 362
TE +R VGL L N D+A +L V+ + LF F RPV L G
Sbjct: 1434 YISSQTERPVRFVGLSTALANAGDLADWLGVE-EIGLFNFKPSVRPVPLEVHIQGYPGKY 1492
Query: 363 PLQRLQLMNDICYEKIMDVAGMNRVLIFVHSRKETAKTARAIRDTVLANDTLGRLLREDS 422
R+ MN Y I + VLIFV SR++T TA + +++ + L
Sbjct: 1493 YCPRMNSMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAASDEHSRQFLNMPE 1552
Query: 423 ASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALA 482
+ ++ L+ V+ +L+ L +G +HHAG+ DR LVE+LFA+ +QVLV T+ LA
Sbjct: 1553 EALEMFLSQ---VSDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1609
Query: 483 WGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIIITGFSEL 542
WGVNL A VIIKGT+ Y+ + + + +++QM+GRAGR QF G+ +I+ +
Sbjct: 1610 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKK 1669
Query: 543 EYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHNAREACNWIGYTYLYARMLRNPSLY 602
+Y + E P+ES +L D +NAEIV GT+ N ++A +++ +TYL+ R++ NP+ Y
Sbjct: 1670 SFYKKFLYEPFPVESSLRERLHDHINAEIVSGTICNKQDAVHYLTWTYLFRRLMVNPAYY 1729
Query: 603 GL---APDILTRDITLEERRADLIHTAATILDKNNLVKYDRQSGSFHVTDLGRIASYYYI 659
GL P+ L+ ++ L+ + L+ + +K + LG +AS YY+
Sbjct: 1730 GLENVEPEFLSSFLS------SLVQSTFEDLEDSGCIKMNED--VVEPVMLGSVASQYYL 1781
Query: 660 THGTISMYNEHLKPTMGYIELCRLFSLSEEFKYVTVRQDEKMELAKLLKHVSIPI-KESL 718
++ T+SM+ ++ P + S + EF + VR +E+ L + V P+ K L
Sbjct: 1782 SYMTVSMFGSNIGPDTSLEVFLHVLSAASEFDELPVRHNEEKYNEALSEKVRYPVDKNHL 1841
Query: 719 EEPSAKINILLQAYISQLKVEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQSAEKAL 778
E+P K N+L Q++ SQL++ +D+ + + R+++A+ ++ GW S+ +
Sbjct: 1842 EDPHTKANLLFQSHFSQLELPISDYVTDLKSVLDQSIRIIQAMIDVCANSGWLSSSLTCM 1901
Query: 779 NLFKMVTKK---SVQTPLRQFNGIPSYILTKMEKKDL-AWERYYDLSSQELAELI---PA 831
+L +MV + + L + + ++T + K+ + + + D+ L +I PA
Sbjct: 1902 HLLQMVMQGLWLDKDSSLWMLPCMNNDLITSLSKRGIYSLQELLDIPRAALQTVIGNFPA 1961
Query: 832 HKMGRTLHKLIHQFPKLNL-EAHIESITCTVLRVELTLTPDFAWDDRVHGN--------- 881
++ + L H KL L E C +L + L + R H +
Sbjct: 1962 SRLYQDLQNFPHVKMKLKLQERDTGGERCYILHIRLE-----KLNSRRHSSRAFVPRFPK 2016
Query: 882 --VEPFWVIVEDNDGEYILHHEYFMLKKQDISEDHTLNFVVPISQPLPPQFLIRVVSDRW 939
E +W+++ + E + LK+ S+ + +PI+ + +VSD +
Sbjct: 2017 IKEEQWWLVLGNTSTS-----ELYALKRVSFSDHLVTSMKLPITPANLQDVKVTLVSDCY 2071
Query: 940 LG 941
+G
Sbjct: 2072 IG 2073
>Medtr2g064390.1 | U5 small nuclear ribonucleoprotein helicase | LC
| chr2:29190848-29183241 | 20130731
Length = 1579
Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/396 (71%), Positives = 327/396 (82%), Gaps = 4/396 (1%)
Query: 556 ESQFVSKLADQLNAEIVLGTVHNAREACNWIGYTYLYARMLRNPSLYGLAPDILTRDITL 615
ESQF+SKLADQLNAEIVLGTV N +EA WI +TY Y ML NPS YGLA D++ +DI
Sbjct: 327 ESQFISKLADQLNAEIVLGTVQNVKEARLWIRHTYTYVCMLTNPSSYGLAADVIAKDI-- 384
Query: 616 EERRADLIHTAATILDKNNLVKYDRQSGSFHVTDLGRIASYYYITHGTISMYNEHLKPTM 675
E DLIH AAT+LD++NLVKYD SG F VTD GRIASY+ + H TISMY+ LKPTM
Sbjct: 385 ENNIDDLIHEAATLLDESNLVKYDANSGCFQVTDFGRIASYHNVAHRTISMYDNSLKPTM 444
Query: 676 GYIELCRLFSLSEEFKYVTVRQDEKMELAKLLKHVSIPIKESLEEPSAKINILLQAYISQ 735
GY ELC+LFSLSEE K+VTV++DEK++L +L HV IPIKESLEEP+AK+N+LLQAYISQ
Sbjct: 445 GYEELCQLFSLSEELKHVTVKEDEKLQLEELFNHVHIPIKESLEEPTAKVNVLLQAYISQ 504
Query: 736 LKVEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQSAEKALNLFKMVTKK--SVQTPL 793
K+EGLS+TSDMVFITQSAGRLL ALFEIVLKRGWAQ AEKALNL KMVTK+ SVQTPL
Sbjct: 505 TKLEGLSMTSDMVFITQSAGRLLWALFEIVLKRGWAQLAEKALNLCKMVTKRMWSVQTPL 564
Query: 794 RQFNGIPSYILTKMEKKDLAWERYYDLSSQELAELIPAHKMGRTLHKLIHQFPKLNLEAH 853
QFN IPS+ILT+++KKDL WE+Y++LS+QE+ ELI A MGR LHKLI QFPKLNL AH
Sbjct: 565 CQFNVIPSHILTELKKKDLTWEKYFNLSAQEVGELIRAPTMGRKLHKLIRQFPKLNLVAH 624
Query: 854 IESITCTVLRVELTLTPDFAWDDRVHGNVEPFWVIVEDNDGEYILHHEYFMLKKQDISED 913
+ T VL VELT+TPDFAWDD +HG VEPFWVI+ED DG ILHHEYF+LKKQ I ED
Sbjct: 625 VRPTTSAVLGVELTITPDFAWDDIMHGYVEPFWVIMEDKDGAQILHHEYFLLKKQHIKED 684
Query: 914 HTLNFVVPISQPLPPQFLIRVVSDRWLGSQTVLPVS 949
HTLNF V I + LPPQ+ IRVVSD+WLGSQTVLPVS
Sbjct: 685 HTLNFTVSIDKCLPPQYSIRVVSDKWLGSQTVLPVS 720
Score = 202 bits (515), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 162/276 (58%), Gaps = 36/276 (13%)
Query: 114 PDAGPFDPNEKLVKISSMPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGK 173
P + + +V IS+MPDWAQPAFKGMTHLNR+Q+KVY TALF NLLLCAPTG+GK
Sbjct: 86 PTDSSSEEDYNIVMISTMPDWAQPAFKGMTHLNRVQSKVYKTALFNHDNLLLCAPTGAGK 145
Query: 174 FDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRD 233
VAVLTILQ IA +RN +G IDHSAYKI+Y+ +A+V ++V L + +KV +
Sbjct: 146 DIVAVLTILQQIALHRNPYNGYIDHSAYKILYMTHSEAVV-KLVRMLRKTFEDYGIKVGE 204
Query: 234 LSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXXNNRGPV 293
LS D S+T +QI+E+QI+ RTYT+ +K +NRG
Sbjct: 205 LSEDPSVTWEQIEESQIM--------------NHRTYTEQLK-LIIIDDCHFLNDNRGFA 249
Query: 294 LESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLYQ 353
LES++ RTI ++ IRLVG A P Y DVA FL VD +N +F FD+ R + +
Sbjct: 250 LESVMTRTILHMKNC---IRLVGFSATFPYYVDVARFLTVDVNNGIFTFDDSYRHIQIE- 305
Query: 354 QYAGITVTEPLQRLQLMNDICYEKIMDVAGMNRVLI 389
MN +C EK+M +AG N V++
Sbjct: 306 ----------------MNRVCMEKVMSIAGKNPVIL 325
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 206/857 (24%), Positives = 369/857 (43%), Gaps = 74/857 (8%)
Query: 121 PNEKLVKISSMPDWA--QPAFKGM----THLNRIQTKVYDTALFKPHNLLLCAPTGSGKF 174
P +L+ + +P A P+++ + H N +QT+V+ N+L+ PTGSGK
Sbjct: 731 PPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVATPTGSGKT 790
Query: 175 DVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLHEN-DVKVRD 233
A IL RN + + ++ +VY+ P + L + + + +KV +
Sbjct: 791 ICAEFAIL------RNHQINT--NNDMLVVYLTPNETLAKQQYLDWDKKFGNGLKLKVVE 842
Query: 234 LSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXXNNRGPV 293
LSGD + + ++E QI+V+TPE+WD + R V G V
Sbjct: 843 LSGDPQIDLELLREGQIIVSTPERWDALNRSRKAMNVAMSVSLFIIDQLHLIGEQG-GHV 901
Query: 294 LESIVART------IRQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDR 347
+E V+R I + +RLVGL ++ N +D+ + + + F+ +
Sbjct: 902 IEGTVSRMKSHDIGINYFIKSYSKVRLVGLSTSVSNAKDLGEW--IGATSHGFFNFPLGK 959
Query: 348 PVHLYQQYAGITVTEPLQRLQLMNDICYEKIMD-VAGMNRVLIFVHSRKETAKTARAIRD 406
V + Q G+ V R+Q M Y I V ++FV SRK A +
Sbjct: 960 SVEIQTQ--GVDVANFEARMQAMTKPTYIAITQLVKNEQTSIVFVPSRKYVRLVAVDLIK 1017
Query: 407 TVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLVEDL 466
A+ L A L+ + ++ LK L G H G+ +DR +V
Sbjct: 1018 YKGADGDKRSFLLNPLAE---LVPFINKISDEMLKTTLREGVGFLHEGLNGSDRDIVTQS 1074
Query: 467 FADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAGRSQ 526
F G +QV + T+++ V L VI+ GTQ Y+ + + T +++QM+
Sbjct: 1075 FKSGLIQVCIITSSICREVKLSTPLVIVMGTQYYDGPENSQTNYPVADLLQMVQPVSSPL 1134
Query: 527 FTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHNAREAC-NW 585
G+ II+ EYY +++ P+ES L D + + + ++ N+
Sbjct: 1135 VNGHGKCIILCHTPREEYYKALLCGTYPVESVLPHFLHDSILVGVAGKFIFFKKDVVENY 1194
Query: 586 IGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNN--LVKYDRQSG 643
+ T+LY R+ RNP YG +D+ + R +D L +N L+ DR
Sbjct: 1195 LANTFLYKRLTRNPEFYG------CQDLAV--RMSDFGKNTIADLQENKCVLLGDDR--- 1243
Query: 644 SFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELCRLFSLSEEFKYVTVR--QDEKM 701
+ TD G +YIT+ T++M++ L T L + S + +F + +R DE+
Sbjct: 1244 -IYCTDQGEKTIKFYITYKTMAMFSASLTQTTDMGGLLDIVSKAPDFDALPIRFGIDEEE 1302
Query: 702 ELAKLLKHVSIPIKES-LEEPSAKINILLQAYISQLKVEGLSLTSDMVFITQSAGRLLRA 760
E+ +LL + P + S ++ A N+LLQA++S+ V G++L ++ A +LL+A
Sbjct: 1303 EVCRLLSNQRFPYENSKFKDTHAIANVLLQAHLSRTSV-GVNLAFCQKYVLSFAHKLLQA 1361
Query: 761 LFEIVLKRGWAQSAEKALNLFKMVTKKSVQTP--LRQFNGIPSYILTKMEKKDLAWERYY 818
+ I K+ W A+ +M+ + + +T L Q + + K +K++++
Sbjct: 1362 IIAIASKKRWLGPTVLAITFNQMLIQGTWETDSVLLQVPHVTKQLAIKCQKRNIS--SLD 1419
Query: 819 DLSSQELAELIPAHKMGRTLHKLIHQF------PKL--NLEAHIESITCTVLRVELTLTP 870
DL E +L M + I QF P L +E +ES +++ +
Sbjct: 1420 DLKKMEHGKLCEIFNMSDSRLCEISQFFSHYFIPVLVYKVEHALESPEKIKVKIFFEIKK 1479
Query: 871 DFAWDDRVHGNVEP------FWVIVEDNDGEYILHHEYFMLKKQDISEDHTLNFVVPISQ 924
D ++ VH + P +W+IV+ +D + ++ + L F VP ++
Sbjct: 1480 D---EEFVHAPLFPTTQRKTWWLIVQRSDD---CSFDMGSIEAAGSENGYMLKFTVP-NR 1532
Query: 925 PLPPQFLIRVVSDRWLG 941
P +IR + + + G
Sbjct: 1533 PGRTTLVIRFMCNSYRG 1549
>Medtr4g008780.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase | HC | chr4:1682714-1679988 | 20130731
Length = 890
Score = 239 bits (611), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 194/692 (28%), Positives = 334/692 (48%), Gaps = 36/692 (5%)
Query: 107 GYDEIHLPDAGPFDPNEKLVKISSMPDWA--QPAFKGM----THLNRIQTKVYDTALFKP 160
+ I LP+ P P +L+ + +P A P+++ + H N IQT+V+ TAL+
Sbjct: 46 SFRHIILPEKYP--PPTELLDLQPLPVTALQSPSYETLYQDFKHFNPIQTQVF-TALYNS 102
Query: 161 H-NLLLCAPTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGN 219
N L+ APTGSGK A IL RN + GS S ++VYVAP++AL E +
Sbjct: 103 DDNALVAAPTGSGKTICAEFAIL------RNHQKGS--DSVMRVVYVAPIEALAKERYRD 154
Query: 220 LSNRLHEN-DVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXX 278
+ + V +L+G+ + + +++ QI+++TPEKWD ++R+ R + Q V
Sbjct: 155 WEKKFGGGLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFI 214
Query: 279 XXXXXXXXXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNE 338
RG VLE IV+R E+ IR V L ++ N +D+ ++ +
Sbjct: 215 IDELHLIG-GQRGSVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDWIGAT-SHG 272
Query: 339 LFYFDNDDRPVHLYQQYAGITVTEPLQRLQLMNDICYEKIMDVAGMNR-VLIFVHSRKET 397
LF F RPV L + + R+Q M Y I A + L+FV +RK
Sbjct: 273 LFNFSPVVRPVPLEIHIQSVDIANFKARMQAMTKRTYTAIAQHAKNGKPALVFVPTRKHV 332
Query: 398 AKTARAIRDTVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTR 457
T + A+ L + S K L + ++ LK L G H G++
Sbjct: 333 RLTTMDLITYSSADSGEKSFLLQ---STKELEPFLNKISDEMLKVTLREGVGYLHEGLSS 389
Query: 458 ADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQ 517
D + LF G +Q V ++++ + L A V++ GTQ Y+ E A T+ +++Q
Sbjct: 390 LDHDIEAQLFEAGWIQDCVLSSSMCYKDTLLAHLVVVMGTQYYDGE-NAQTDYPVTDLLQ 448
Query: 518 MLGRAGRSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVH 577
M+G A R G+ +I+ EYY + E P+ES L D +NAEIV G +
Sbjct: 449 MMGHASRPLVDHSGKCVILCHAPSKEYYKKFLFEAFPVESHLHHFLHDNMNAEIVAGIIE 508
Query: 578 NAREACNWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNNLVK 637
N ++ +++ +T++Y R+ +NP+ Y L L + ++L+ + L+ + V
Sbjct: 509 NKQDDVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDYLSELVENTLSDLEASKCVS 565
Query: 638 YDRQSGSFHVT--DLGRIASYYYITHGTISMYNEHLKPTMGYIELCRLFSLSEEFKYVTV 695
+ H++ +LG I+SYY I++ TI ++ ++ L ++ S + E+ Y+ +
Sbjct: 566 IE---DDIHLSPLNLGMISSYYNISYTTIERFSSYITSNTKMKGLLKILSSASEYAYLPI 622
Query: 696 RQDEKMELAKLLKHVSIPIKE-SLEEPSAKINILLQAYISQLKVEGLSLTSDMVFITQSA 754
+ E+ + +L+ H + +++P K N LLQA+ S+ V G +L D + SA
Sbjct: 623 QPGEEEVVRRLINHQRFSFESPKVKDPHVKANALLQAHFSRQSVGG-NLALDQREVLLSA 681
Query: 755 GRLLRALFEIVLKRGWAQSAEKALNLFKMVTK 786
+LL+AL +++ GW A A+ + +M+T+
Sbjct: 682 NKLLQALVDVISSNGWLSLALLAMEVSQMMTQ 713
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 41/47 (87%)
Query: 904 MLKKQDISEDHTLNFVVPISQPLPPQFLIRVVSDRWLGSQTVLPVSL 950
MLKKQ + EDHTLNF+VPI +PLPPQ+ IRVVSDRWLGSQT LPVS
Sbjct: 1 MLKKQYVDEDHTLNFIVPIYEPLPPQYFIRVVSDRWLGSQTGLPVSF 47
>Medtr7g075463.2 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 940
Score = 233 bits (594), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 198/694 (28%), Positives = 319/694 (45%), Gaps = 62/694 (8%)
Query: 125 LVKISSMPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQL 184
L + +P Q F + N +Q++ + T N+++ APTGSGK + L IL+L
Sbjct: 6 LKSVFDLPQPFQSCF-SFRYFNSLQSECFPTCYHSDVNMVISAPTGSGKTVLFELCILRL 64
Query: 185 IAGYRNQESGSID-HSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRDLSGD-QSLTP 242
++ + E I + K +Y+AP KALV E V + + + + +L+GD +S TP
Sbjct: 65 LSRSISSEGRFIHVKGSLKTIYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTP 124
Query: 243 QQIQETQILVTTPEKWDIITR---KSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVA 299
+ I E I++TTPEK+D ++R +SG ++ + + RG LE+IV+
Sbjct: 125 RNINEADIILTTPEKFDAVSRYGIESGGLSFFSDI-ALLLIDEVHLLNDPRGAALEAIVS 183
Query: 300 RTIRQIETTED-------NIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLY 352
R I+ I +R + L A +PN ED+A +L V PD + F + RPV L
Sbjct: 184 R-IKIISCNPKMKLNPLAQVRFLALSATIPNIEDLAKWLLV-PDQGIKRFGEEMRPVKLT 241
Query: 353 QQYAGITVTEPLQRLQLMNDICYEK---------IMDVAGMNRVLIFVHSRKETAKTARA 403
+ G + ND +EK +M + LIF +RK + A+
Sbjct: 242 TKVFGYAPAK--------NDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQR 293
Query: 404 IRDTVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLV 463
+ V+ ++ ++ L + ++ + YG H+ G+ DR +V
Sbjct: 294 LAQIVMNFGQSNPFIKSREQQDQLREASMSL-SDKQMQSYILYGVGYHNGGLCHKDRSIV 352
Query: 464 EDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAG 523
E LF G +QVL +T LA G+NL A TV+IK TQ +N EK + E ++QM GRAG
Sbjct: 353 EGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQMSGRAG 412
Query: 524 RSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHNAREAC 583
R F G II+T + Y ++++ +ESQ +S + + L AEIV TV + +A
Sbjct: 413 RPPFDDTGMVIIMTRRETVHLYENLLSGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAI 472
Query: 584 NWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNNLVKYDRQSG 643
W+ +YLY RM RNP YG+ I LE+ ++ L + +V D
Sbjct: 473 EWMKCSYLYVRMKRNPENYGIKKGISAD--RLEKHVQEICVQKVNELSQYQMVWVDEDGF 530
Query: 644 SFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELC------RLFSLSEEFKYVTVRQ 697
D GR+ + YY+ T +K M E C R+ +EE ++ +R+
Sbjct: 531 LLRPLDPGRLMTKYYLRFDT-------MKQIMRTPESCSLEDALRVVCFAEEIAWIQLRR 583
Query: 698 DEKMEL--------AKLLKHV---SIPIKESLEEPSAKINILLQAYIS-QLKVEGLSLTS 745
+EK L +L H+ K+ ++ KI IL ++ V LSL
Sbjct: 584 NEKKILNDINADKDGRLRFHILGDKGKKKKRIQTREEKIFILANDCLTGDPSVHELSLIQ 643
Query: 746 DMVFITQSAGRLLRALFE-IVLKRGWAQSAEKAL 778
D+ I + R+ + + E V K+ + + AL
Sbjct: 644 DINSICSNGCRIAKCMKEYFVYKKNFKGAVNSAL 677
>Medtr7g075463.4 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 940
Score = 233 bits (594), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 198/694 (28%), Positives = 319/694 (45%), Gaps = 62/694 (8%)
Query: 125 LVKISSMPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQL 184
L + +P Q F + N +Q++ + T N+++ APTGSGK + L IL+L
Sbjct: 6 LKSVFDLPQPFQSCF-SFRYFNSLQSECFPTCYHSDVNMVISAPTGSGKTVLFELCILRL 64
Query: 185 IAGYRNQESGSID-HSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRDLSGD-QSLTP 242
++ + E I + K +Y+AP KALV E V + + + + +L+GD +S TP
Sbjct: 65 LSRSISSEGRFIHVKGSLKTIYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTP 124
Query: 243 QQIQETQILVTTPEKWDIITR---KSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVA 299
+ I E I++TTPEK+D ++R +SG ++ + + RG LE+IV+
Sbjct: 125 RNINEADIILTTPEKFDAVSRYGIESGGLSFFSDI-ALLLIDEVHLLNDPRGAALEAIVS 183
Query: 300 RTIRQIETTED-------NIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLY 352
R I+ I +R + L A +PN ED+A +L V PD + F + RPV L
Sbjct: 184 R-IKIISCNPKMKLNPLAQVRFLALSATIPNIEDLAKWLLV-PDQGIKRFGEEMRPVKLT 241
Query: 353 QQYAGITVTEPLQRLQLMNDICYEK---------IMDVAGMNRVLIFVHSRKETAKTARA 403
+ G + ND +EK +M + LIF +RK + A+
Sbjct: 242 TKVFGYAPAK--------NDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQR 293
Query: 404 IRDTVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLV 463
+ V+ ++ ++ L + ++ + YG H+ G+ DR +V
Sbjct: 294 LAQIVMNFGQSNPFIKSREQQDQLREASMSL-SDKQMQSYILYGVGYHNGGLCHKDRSIV 352
Query: 464 EDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAG 523
E LF G +QVL +T LA G+NL A TV+IK TQ +N EK + E ++QM GRAG
Sbjct: 353 EGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQMSGRAG 412
Query: 524 RSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHNAREAC 583
R F G II+T + Y ++++ +ESQ +S + + L AEIV TV + +A
Sbjct: 413 RPPFDDTGMVIIMTRRETVHLYENLLSGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAI 472
Query: 584 NWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNNLVKYDRQSG 643
W+ +YLY RM RNP YG+ I LE+ ++ L + +V D
Sbjct: 473 EWMKCSYLYVRMKRNPENYGIKKGISAD--RLEKHVQEICVQKVNELSQYQMVWVDEDGF 530
Query: 644 SFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELC------RLFSLSEEFKYVTVRQ 697
D GR+ + YY+ T +K M E C R+ +EE ++ +R+
Sbjct: 531 LLRPLDPGRLMTKYYLRFDT-------MKQIMRTPESCSLEDALRVVCFAEEIAWIQLRR 583
Query: 698 DEKMEL--------AKLLKHV---SIPIKESLEEPSAKINILLQAYIS-QLKVEGLSLTS 745
+EK L +L H+ K+ ++ KI IL ++ V LSL
Sbjct: 584 NEKKILNDINADKDGRLRFHILGDKGKKKKRIQTREEKIFILANDCLTGDPSVHELSLIQ 643
Query: 746 DMVFITQSAGRLLRALFE-IVLKRGWAQSAEKAL 778
D+ I + R+ + + E V K+ + + AL
Sbjct: 644 DINSICSNGCRIAKCMKEYFVYKKNFKGAVNSAL 677
>Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 1050
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 198/694 (28%), Positives = 319/694 (45%), Gaps = 62/694 (8%)
Query: 125 LVKISSMPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQL 184
L + +P Q F + N +Q++ + T N+++ APTGSGK + L IL+L
Sbjct: 6 LKSVFDLPQPFQSCF-SFRYFNSLQSECFPTCYHSDVNMVISAPTGSGKTVLFELCILRL 64
Query: 185 IAGYRNQESGSID-HSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRDLSGD-QSLTP 242
++ + E I + K +Y+AP KALV E V + + + + +L+GD +S TP
Sbjct: 65 LSRSISSEGRFIHVKGSLKTIYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTP 124
Query: 243 QQIQETQILVTTPEKWDIITR---KSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVA 299
+ I E I++TTPEK+D ++R +SG ++ + + RG LE+IV+
Sbjct: 125 RNINEADIILTTPEKFDAVSRYGIESGGLSFFSDI-ALLLIDEVHLLNDPRGAALEAIVS 183
Query: 300 RTIRQIETTED-------NIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLY 352
R I+ I +R + L A +PN ED+A +L V PD + F + RPV L
Sbjct: 184 R-IKIISCNPKMKLNPLAQVRFLALSATIPNIEDLAKWLLV-PDQGIKRFGEEMRPVKLT 241
Query: 353 QQYAGITVTEPLQRLQLMNDICYEK---------IMDVAGMNRVLIFVHSRKETAKTARA 403
+ G + ND +EK +M + LIF +RK + A+
Sbjct: 242 TKVFGYAPAK--------NDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQR 293
Query: 404 IRDTVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLV 463
+ V+ ++ ++ L + ++ + YG H+ G+ DR +V
Sbjct: 294 LAQIVMNFGQSNPFIKSREQQDQLREASMSLSDKQ-MQSYILYGVGYHNGGLCHKDRSIV 352
Query: 464 EDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAG 523
E LF G +QVL +T LA G+NL A TV+IK TQ +N EK + E ++QM GRAG
Sbjct: 353 EGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQMSGRAG 412
Query: 524 RSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHNAREAC 583
R F G II+T + Y ++++ +ESQ +S + + L AEIV TV + +A
Sbjct: 413 RPPFDDTGMVIIMTRRETVHLYENLLSGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAI 472
Query: 584 NWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNNLVKYDRQSG 643
W+ +YLY RM RNP YG+ I LE+ ++ L + +V D
Sbjct: 473 EWMKCSYLYVRMKRNPENYGIKKGISAD--RLEKHVQEICVQKVNELSQYQMVWVDEDGF 530
Query: 644 SFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELC------RLFSLSEEFKYVTVRQ 697
D GR+ + YY+ T +K M E C R+ +EE ++ +R+
Sbjct: 531 LLRPLDPGRLMTKYYLRFDT-------MKQIMRTPESCSLEDALRVVCFAEEIAWIQLRR 583
Query: 698 DEKMEL--------AKLLKHV---SIPIKESLEEPSAKINILLQAYIS-QLKVEGLSLTS 745
+EK L +L H+ K+ ++ KI IL ++ V LSL
Sbjct: 584 NEKKILNDINADKDGRLRFHILGDKGKKKKRIQTREEKIFILANDCLTGDPSVHELSLIQ 643
Query: 746 DMVFITQSAGRLLRALFE-IVLKRGWAQSAEKAL 778
D+ I + R+ + + E V K+ + + AL
Sbjct: 644 DINSICSNGCRIAKCMKEYFVYKKNFKGAVNSAL 677
>Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 1252
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 198/694 (28%), Positives = 319/694 (45%), Gaps = 62/694 (8%)
Query: 125 LVKISSMPDWAQPAFKGMTHLNRIQTKVYDTALFKPHNLLLCAPTGSGKFDVAVLTILQL 184
L + +P Q F + N +Q++ + T N+++ APTGSGK + L IL+L
Sbjct: 6 LKSVFDLPQPFQSCF-SFRYFNSLQSECFPTCYHSDVNMVISAPTGSGKTVLFELCILRL 64
Query: 185 IAGYRNQESGSID-HSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRDLSGD-QSLTP 242
++ + E I + K +Y+AP KALV E V + + + + +L+GD +S TP
Sbjct: 65 LSRSISSEGRFIHVKGSLKTIYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTP 124
Query: 243 QQIQETQILVTTPEKWDIITR---KSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVA 299
+ I E I++TTPEK+D ++R +SG ++ + + RG LE+IV+
Sbjct: 125 RNINEADIILTTPEKFDAVSRYGIESGGLSFFSDI-ALLLIDEVHLLNDPRGAALEAIVS 183
Query: 300 RTIRQIETTED-------NIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDRPVHLY 352
R I+ I +R + L A +PN ED+A +L V PD + F + RPV L
Sbjct: 184 R-IKIISCNPKMKLNPLAQVRFLALSATIPNIEDLAKWLLV-PDQGIKRFGEEMRPVKLT 241
Query: 353 QQYAGITVTEPLQRLQLMNDICYEK---------IMDVAGMNRVLIFVHSRKETAKTARA 403
+ G + ND +EK +M + LIF +RK + A+
Sbjct: 242 TKVFGYAPAK--------NDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQR 293
Query: 404 IRDTVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLV 463
+ V+ ++ ++ L + ++ + YG H+ G+ DR +V
Sbjct: 294 LAQIVMNFGQSNPFIKSREQQDQLREASMSLSDKQ-MQSYILYGVGYHNGGLCHKDRSIV 352
Query: 464 EDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAG 523
E LF G +QVL +T LA G+NL A TV+IK TQ +N EK + E ++QM GRAG
Sbjct: 353 EGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQMSGRAG 412
Query: 524 RSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVHNAREAC 583
R F G II+T + Y ++++ +ESQ +S + + L AEIV TV + +A
Sbjct: 413 RPPFDDTGMVIIMTRRETVHLYENLLSGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAI 472
Query: 584 NWIGYTYLYARMLRNPSLYGLAPDILTRDITLEERRADLIHTAATILDKNNLVKYDRQSG 643
W+ +YLY RM RNP YG+ I LE+ ++ L + +V D
Sbjct: 473 EWMKCSYLYVRMKRNPENYGIKKGISAD--RLEKHVQEICVQKVNELSQYQMVWVDEDGF 530
Query: 644 SFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELC------RLFSLSEEFKYVTVRQ 697
D GR+ + YY+ T +K M E C R+ +EE ++ +R+
Sbjct: 531 LLRPLDPGRLMTKYYLRFDT-------MKQIMRTPESCSLEDALRVVCFAEEIAWIQLRR 583
Query: 698 DEKMEL--------AKLLKHV---SIPIKESLEEPSAKINILLQAYIS-QLKVEGLSLTS 745
+EK L +L H+ K+ ++ KI IL ++ V LSL
Sbjct: 584 NEKKILNDINADKDGRLRFHILGDKGKKKKRIQTREEKIFILANDCLTGDPSVHELSLIQ 643
Query: 746 DMVFITQSAGRLLRALFE-IVLKRGWAQSAEKAL 778
D+ I + R+ + + E V K+ + + AL
Sbjct: 644 DINSICSNGCRIAKCMKEYFVYKKNFKGAVNSAL 677
>Medtr2g030905.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase | LC | chr2:11697696-11700581 | 20130731
Length = 961
Score = 200 bits (509), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 184/736 (25%), Positives = 348/736 (47%), Gaps = 53/736 (7%)
Query: 109 DEIHLPDAGPFDPNEKLVKISSMPDWAQPAF--KGMTHLNRIQTKVYDTALFKPHNLLLC 166
+E H A FD + L+ ++S+ + + A N+IQT + N+ L
Sbjct: 117 EEYHPLPAEAFDV-QSLLPVASLGNTSYEALYQNQFKQFNKIQTHAFQVLYKSDDNVFLA 175
Query: 167 APTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLHE 226
APTGSGK A + IL RN + G + ++VY+AP++A+ +
Sbjct: 176 APTGSGKTTCAEIAIL------RNHQKGHM-----RVVYIAPIRAIAQNQYREWKTKFGG 224
Query: 227 N-DVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXX 285
+ + +L+G+ + ++E QI++TTP+ WD ++R+ Q V
Sbjct: 225 GLNSMIVELTGENETDLKLLEEGQIIITTPQIWDALSRQWKQIIQIQQVPLLILDDLHFI 284
Query: 286 XXNNRGPVLESIVARTIRQIET-TEDNIRLVGLCANLPNYEDVALFLCVDPDNELFYFDN 344
G +LE I+ R ++QI T +R+V L A + N +D+ ++ + LF F
Sbjct: 285 G-GPEGHILERIIVR-MKQISTRVGKKMRIVALSAPITNGKDIGEWIGAT-SHSLFNFSP 341
Query: 345 DDR--PVHLY---QQYAGITVTEPLQRLQLMNDICYEKIMDVAGMNR-VLIFVHSRKETA 398
R P+ L+ +++ + PL RL+ M I + I + A + +L++V + + +
Sbjct: 342 TARHVPLELFIKVVEFSDLRSANPLVRLKEMAKITHSFITEHAKKGKPILVYVPTWENVS 401
Query: 399 KTARAIRDTVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRA 458
+T + A + ++ A + ++L +LK L G H G+
Sbjct: 402 RTVFNMISVSQAKSWVQLNSQQHQAFEASICKISNL----ELKSALALGVGFLHEGLNTN 457
Query: 459 DRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPL-EVMQ 517
D++ V F G +++ + ++++ W V+L A V++ GT+ Y+ + ++ P+ +++
Sbjct: 458 DQEFVIRSFEAGLIKICIISSSMCWEVSLSAHIVVLMGTEYYDFDGPSY----PITDILH 513
Query: 518 MLGRAGRSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSKLADQLNAEIVLGTVH 577
M+G+AGR S G+ +I+ ++ YY ++ + LPIES F + L D +NAEIV G V
Sbjct: 514 MMGQAGRRLIDSVGKALILCLPNKKRYYNILLRDLLPIESHFHNCLNDTVNAEIVAGIVE 573
Query: 578 NAREACNWIGYTYLYARMLRNPSLYG----LAPDILTRDITLEERRADLIHTAATILDKN 633
N ++A +++ ++L R+ +NPS Y + D T +L +R + + T+ + D+
Sbjct: 574 NFKDAVDYLEKSFLCRRLPKNPSYYDFPGFIGEDAGTHLSSLVQRSMNELMTSGMVRDEG 633
Query: 634 NLVKYDRQSGSFHVTDLGRIASYYYITHGTISMYNEHLKPTMGYIELCRLFSLSEEFKYV 693
D S S LGRIAS YI + TI ++ + +L + + EF+
Sbjct: 634 G----DNISSSV----LGRIASNNYINYRTIGAFSTRITLDSNIRDLLEILWSATEFEAH 685
Query: 694 TVRQ--DEKMELAKLLKHVSIP-IKESLEEPSAKINILLQAYISQLKVEGLSLTSDMVFI 750
R+ E+ E+ L+ P + + P K LLQA+ S+L + ++L +D +
Sbjct: 686 PTRRLHVEEDEIRVLIAKEKFPHVDNRVTNPQTKAIALLQAHFSRLPISSMNLEADRREV 745
Query: 751 TQSAGRLLRALFEIVLKRGWAQSAEKALNLFKMVTKKSVQ-TPLRQFNGIPSYILTKMEK 809
+LL L E++ R W S +A+ + +++ + P+ +P + ++K
Sbjct: 746 VLLFEKLLIGLMEVISDRRWILSYARAMEINQILIQAIWHDDPI--LLQLPHFTRELVDK 803
Query: 810 -KDLAWERYYDLSSQE 824
D+ + +YDL + E
Sbjct: 804 CNDINIQNFYDLKTTE 819
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 850 LEAHIESITCTVLRVELTLTPDFAWDDRVHGNVEPFWVIVEDND---GEYILHHEYFMLK 906
L+ ++ IT T+L EL +TP+F P V+VED + I+H +YFMLK
Sbjct: 8 LDVGVKPITRTLLMFELKITPNFE-----ELECLPIDVVVEDRSIIIDKKIVHSQYFMLK 62
Query: 907 KQDISEDHTLNFVVPISQPLPPQFLIRV 934
KQ + E TLNF V I PLP +F++ +
Sbjct: 63 KQYVGETTTLNFPVEIHGPLPKEFILDI 90
>Medtr4g008770.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase, putative | LC | chr4:1676751-1672827 |
20130731
Length = 666
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 62/69 (89%)
Query: 882 VEPFWVIVEDNDGEYILHHEYFMLKKQDISEDHTLNFVVPISQPLPPQFLIRVVSDRWLG 941
VEPFWVIVEDNDGE ILHHEYFMLKKQ + EDHTLNF+VPI +PLPPQ+ IRVVSDRWLG
Sbjct: 39 VEPFWVIVEDNDGENILHHEYFMLKKQYVDEDHTLNFIVPIYEPLPPQYFIRVVSDRWLG 98
Query: 942 SQTVLPVSL 950
SQT LPVS
Sbjct: 99 SQTDLPVSF 107
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 62/69 (89%)
Query: 882 VEPFWVIVEDNDGEYILHHEYFMLKKQDISEDHTLNFVVPISQPLPPQFLIRVVSDRWLG 941
VEPFWVIVEDNDGE ILHHEYFMLKKQ + EDHTLNF+VPI +PLPPQ+ IRVVSDRWLG
Sbjct: 351 VEPFWVIVEDNDGENILHHEYFMLKKQYVDEDHTLNFIVPIYEPLPPQYFIRVVSDRWLG 410
Query: 942 SQTVLPVSL 950
SQT LPVS
Sbjct: 411 SQTDLPVSF 419
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 20/236 (8%)
Query: 107 GYDEIHLPDAGPFDPNEKLVKISSMPDWA------QPAFKGMTHLNRIQTKVYDTALFKP 160
+ I LP+ P P +L+ + +P A + ++ H N IQT+V+ TAL+
Sbjct: 106 SFRHIILPEKYP--PPTELLDLQPLPVTALQSPSYETLYQDFKHFNPIQTQVF-TALYNS 162
Query: 161 H-NLLLCAPTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGN 219
N L+ APTGSGK A IL RN + GS S ++VY AP++AL E +
Sbjct: 163 DDNALVAAPTGSGKTICAEFAIL------RNHKKGS--DSVMRVVYEAPIEALAKERYRD 214
Query: 220 LSNRLHEN-DVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXX 278
+ + V +L+G+ + + +++ QI+++TPEKWD ++R+ R + Q V
Sbjct: 215 WEKKFGGGLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVS-LF 273
Query: 279 XXXXXXXXXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLCVD 334
RGPVLE IV+R E+ IR V L ++ N +D+ ++ ++
Sbjct: 274 IIDELHLIGGQRGPVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDWIVLE 329
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 20/236 (8%)
Query: 107 GYDEIHLPDAGPFDPNEKLVKISSMPDWA------QPAFKGMTHLNRIQTKVYDTALFKP 160
+ I LP+ P P +L+ + +P A + ++ H N IQT+V+ TAL+
Sbjct: 418 SFRHIILPEKYP--PPTELLDLQPLPVTALQSPSYETLYQDFKHFNPIQTQVF-TALYNS 474
Query: 161 H-NLLLCAPTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVAEVVGN 219
N L+ APTGSGK A IL RN + GS S ++VY AP++AL E +
Sbjct: 475 DDNALVAAPTGSGKTICAEFAIL------RNHKKGS--DSVMRVVYEAPIEALAKERYRD 526
Query: 220 LSNRLHEN-DVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLVKXXX 278
+ + V +L+G+ + + +++ QI+++TPEKWD ++R+ R + Q V
Sbjct: 527 WEKKFGGGLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVS-LF 585
Query: 279 XXXXXXXXXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVALFLCVD 334
RG VLE IV+R E+ IR V L ++ N +D+ ++ ++
Sbjct: 586 IIDELHLIGGQRGTVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDWIVLE 641
>Medtr1g008600.1 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr1:991547-976147 | 20130731
Length = 2177
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 192/500 (38%), Gaps = 93/500 (18%)
Query: 134 WAQPAF------KGMTHLNRIQTKVYDT-ALFKPHNLLLCAPTGSGKFDVAVLTILQLIA 186
W QP KG++ L Q + + NL+ CA T +GK VA + +L+ +
Sbjct: 507 WLQPEICSIYRKKGISKLYNWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRKVI 566
Query: 187 GYRNQESGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLHENDVKVRDLSGDQSLTPQQIQ 246
+ + V P ++ E +L L VR G+Q +
Sbjct: 567 -----------TTGKMAILVLPYVSICTEKAEHLEKLLEPLGKHVRSYYGNQG-GGSLPK 614
Query: 247 ETQILVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXXNNRGPVLESIVAR------ 300
+T + V T EK + + + + + RG +LE ++ +
Sbjct: 615 DTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDPKRGYLLELMLTKLRYAAG 674
Query: 301 -------------TIRQIETTEDNIRLVGLCANLPNYEDVALFLCVDPDNELFYFDNDDR 347
+++VG+ A +PN VA +L + + + R
Sbjct: 675 EGISKSSDGEGSGGSSDKNDPAQGLQIVGMSATMPNVAAVADWL------QAALYQTEFR 728
Query: 348 PVHLYQ--------------------QYAGITVTEPLQRLQLMNDICYEKIMDVAGMNRV 387
PV L + + A + +P ++L N++ E V
Sbjct: 729 PVPLEEYIKVGNSIYNKSMELSRTIPKGADLGGKDPDHVVELCNEVVQEG-------QSV 781
Query: 388 LIFVHSRKETAKTARAIRD-----TVLANDTLGRLLREDSASRKILLTHTDLVNSNDLKD 442
LIF SRK TAR + TV N+ SA + L L++
Sbjct: 782 LIFCSSRKGCESTARHVAKFLKSFTVDINENNCEFADITSAINSLRKCPAGL--DPVLEE 839
Query: 443 LLPYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNP 502
P G + HHAG+T +R++VE + G ++VL +T+ LA GVNL A+ VI + +I
Sbjct: 840 TFPAGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRI--- 896
Query: 503 EKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIIITGFSELEYYISIMNEQLPIESQFVSK 562
+ MQM GRAGR+ + GE ++I EL+ + ++NE P S
Sbjct: 897 ---GCDFIDGTRYMQMAGRAGRTGIDTKGESVLICKPQELKKVMGLLNESCP---PLHSC 950
Query: 563 LADQLNA------EIVLGTV 576
L++ LN E+V G +
Sbjct: 951 LSEDLNGMTHAILEVVAGGI 970
>Medtr3g462290.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
HC | chr3:24871545-24853513 | 20130731
Length = 1334
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Query: 387 VLIFVHSRKETAKTARAIRDTVLANDTLGRLLR--EDSASRKILLTHTDLVNSNDLKDLL 444
V+IF S+ K+A ++ T L + + +R D A ++ + +L ++ LL
Sbjct: 636 VVIFCFSKNRCDKSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVESLL 695
Query: 445 PYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEK 504
G +HHAG+ +++VE LF G ++VL ST A GVN A+TV+ + ++ ++
Sbjct: 696 RRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTVRKFDGKE 755
Query: 505 GAWTELSPLEVMQMLGRAGRSQFTSFGEGIII 536
+ +L P E QM GRAGR + G I++
Sbjct: 756 --FRQLLPGEYTQMAGRAGRRGLDNIGTVILM 785
>Medtr7g080730.1 | superkiller viralicidic activity-like protein |
HC | chr7:30721960-30732583 | 20130731
Length = 983
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 168/437 (38%), Gaps = 94/437 (21%)
Query: 155 TALFKPHNLLLCAPTGSGKFDVAVLTILQLIAGYRNQESGSIDHSAYKIVYVAPMKALVA 214
T L ++++ A T +GK VA+ I RN++ +++Y +P+KAL
Sbjct: 70 TCLENSESVMVSAHTSAGKTVVALYAIAM---SLRNKQ---------RVIYTSPIKALSN 117
Query: 215 EVVGNLSNRLHENDVKVRDLSGDQSLTPQQIQETQILVTTPEKWDIITRKSGDRTYTQLV 274
+ +DV + ++GD ++ P LV T E W + K + T+ V
Sbjct: 118 QKYREFKEEF--SDVGL--MTGDVTIDPN----ASCLVMTTEIWRSMQYKGSE--VTREV 167
Query: 275 KXXXXXXXXXXXXNNRGPVLESIVARTIRQIETTEDNIRLVGLCANLPNYEDVA------ 328
RG V E + + + N R V L A +PN ++ A
Sbjct: 168 AWIIFDEVHYMRDRERGVVWEESIVMSPK-------NARFVFLSATVPNAKEFADWVAKV 220
Query: 329 ----------------------------LFLCVDPD------------NELFYFDNDDRP 348
L+L VD N L + DR
Sbjct: 221 HQQPCHIVYTDYRPTPLQHYIFPSGSEGLYLVVDEKGKFREDSFQKALNALIPAADGDRK 280
Query: 349 VHLYQQYAGITVTEPLQRLQLMNDICYEKIMDVAGMNRVLIFVHSRKETAKTARAIRDTV 408
+ G+ + + + + + K++ + V++F S++E A +
Sbjct: 281 KENAKWQKGLVLGKAAEESDIFKMV---KMIIQRQYDPVILFSFSKRECEFLAMQMAKMD 337
Query: 409 LANDTLGRLLREDSASRKILLTHTDLVNSNDLK--------DLLPYGFSIHHAGMTRADR 460
L D E KI D+++ +D K LL G +HH+G+ +
Sbjct: 338 LNGDI------EKDNIEKIFWCAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILK 391
Query: 461 QLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLG 520
+++E LF +G ++ L +T + G+N+ A+TV+ + ++ +K W ++ E +QM G
Sbjct: 392 EVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRW--ITSGEYIQMSG 449
Query: 521 RAGRSQFTSFGEGIIIT 537
RAGR G I++
Sbjct: 450 RAGRRGIDDRGVCILMV 466
>Medtr5g036660.1 | DEAD-box ATP-dependent RNA helicase ISE2 | HC |
chr5:16017947-16009934 | 20130731
Length = 1155
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 390 FVHSRKETAKTARAIRDTVLANDTLGRLLREDSASRKIL------LTHTDLVNSNDLKDL 443
F+ SRK + + D +LL E AS +L + + D V +K L
Sbjct: 434 FIFSRKGCDAAVQYVEDC--------KLLDECEASEVLLALKRFRIQYPDAVRETAVKGL 485
Query: 444 LPYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNPE 503
L G + HHAG + +E+LF G V+V+ +T LA G+N+ A+T +I + +
Sbjct: 486 L-QGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVI--SSLSKRS 542
Query: 504 KGAWTELSPLEVMQMLGRAGRSQFTSFGEGIIITGFSE-LEYYISIMNEQL-PIESQFVS 561
T L+ E++QM GRAGR G +++ +E E ++ L P+ SQF +
Sbjct: 543 DTGRTLLTSNELLQMAGRAGRRGIDESGHVVLVQTPNEGAEECCKVLFSGLEPLVSQFTA 602
Query: 562 KLADQLN 568
LN
Sbjct: 603 SYGMVLN 609
>Medtr5g069360.1 | DEAD/DEAH-box RNA helicase | HC |
chr5:29403540-29411488 | 20130731
Length = 967
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 440 LKDLLPY---GFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKG 496
+K++LP+ G IHH+G+ ++LVE LF +G V+ L +T A G+N+ A+TV+
Sbjct: 372 IKEVLPHLQRGIGIHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFSS 431
Query: 497 TQIYNPEKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIII 536
+ ++ + + + E +QM GRAGR G II+
Sbjct: 432 VKKWDGHEHRY--IRSGEYIQMSGRAGRRGKDEHGICIIM 469
>Medtr1g007510.1 | DNA polymerase theta-like protein | HC |
chr1:413021-417854 | 20130731
Length = 912
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 41/226 (18%)
Query: 362 EPLQRLQLMNDICYEKIMDVAGMNRVLIFVHSRKETAKTARAIRD-----TVLANDTLGR 416
+P ++L N++ E VLIF SRK T R + TV N+
Sbjct: 17 DPDHVVELCNEVVQEG-------QSVLIFCSSRKGCESTGRHVAKFLKSFTVDINENNCE 69
Query: 417 LLREDSASRKILLTHTDLVNSNDLKDLLPYGFSIHHAGMTRADRQLVEDLFADGHVQVLV 476
SA + L L++ P G + HHAG+T +R++VE + ++VL
Sbjct: 70 FADITSAINSLRKCPAGL--DPVLEETFPAGVAFHHAGLTVEEREIVETCYRKDLLRVLT 127
Query: 477 STAALAWGVNLQAQTVIIKGTQIYNPEKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIII 536
+T+ LA GVN A+ VI + +I + MQM GR ++I
Sbjct: 128 ATSTLAAGVNPPARRVIFRQPRI------GCDFIDGTRYMQMAGR------------VVI 169
Query: 537 TGFSELEYYISIMNEQLPIESQFVSKLADQLNA------EIVLGTV 576
EL+ + ++NE P S L++ LN E+V G +
Sbjct: 170 CKPQELKKVMGLLNESCP---PLHSCLSEDLNGMIHAILEVVAGGI 212
>Medtr8g101340.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
HC | chr8:42553280-42543791 | 20130731
Length = 984
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 443 LLPYGFSIHHAGMTRADRQLVEDLFADGHVQVLVSTAALAWGVNLQAQTVIIKGTQIYNP 502
LL G ++HH+G+ ++LVE LF +G V+ L +T A G+N+ A+TV+ + ++
Sbjct: 396 LLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 455
Query: 503 EKGAWTELSPLEVMQMLGRAGRSQFTSFGEGIII 536
+ + + E +QM GRAGR G II+
Sbjct: 456 DSHRY--IGSGEYIQMSGRAGRRGKDERGICIIM 487