Miyakogusa Predicted Gene

Lj5g3v2237600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2237600.1 Non Characterized Hit- tr|G7ZYS7|G7ZYS7_MEDTR
Uncharacterized protein OS=Medicago truncatula GN=MTR_,88.62,0,no
description,NULL; SUBFAMILY NOT NAMED,NULL; AMMECR1 HOMOLOG,AMMECR1;
AMMECR1-like,NULL; AMMECR1,A,CUFF.56976.1
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g111860.1 | AMMECR 1 family protein | HC | chr1:50581200-5...   314   3e-86
Medtr1g111860.2 | AMMECR 1 family protein | HC | chr1:50581323-5...   281   2e-76

>Medtr1g111860.1 | AMMECR 1 family protein | HC |
           chr1:50581200-50588093 | 20130731
          Length = 211

 Score =  314 bits (804), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 149/168 (88%), Positives = 158/168 (94%)

Query: 1   MVTANKEMVVYCFDTLVAHYNKEEAPPPAFDEGRHPLFVTWKKVVNGGEPRLRGCIGSLE 60
           MVTANKEMVVYCFDTLVAHYN ++ P P+FD+G+HPLFVTWKKVVNGGEPRLRGCIGSLE
Sbjct: 1   MVTANKEMVVYCFDTLVAHYNGDQPPTPSFDDGQHPLFVTWKKVVNGGEPRLRGCIGSLE 60

Query: 61  ARDLINGFKDYALISALRDRRFPPIEAKELPLLECTVSILTDYETANDYLDWEVGKHGII 120
           AR LINGF+DYAL SALRDRRFPPIEA+ELPLLECTVSILTDYETANDYLDWEVGKHGII
Sbjct: 61  ARGLINGFRDYALTSALRDRRFPPIEARELPLLECTVSILTDYETANDYLDWEVGKHGII 120

Query: 121 LEFSDPDYNTRRSATYLPGVAAHEGWTKLEAIDSLIRKAGYNGPITDA 168
           +EFSDPDYNTRRSATYLP VAAHEGWT LEAIDSLIRKAG N  ITD+
Sbjct: 121 IEFSDPDYNTRRSATYLPEVAAHEGWTPLEAIDSLIRKAGCNSRITDS 168


>Medtr1g111860.2 | AMMECR 1 family protein | HC |
           chr1:50581323-50587958 | 20130731
          Length = 149

 Score =  281 bits (719), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 132/148 (89%), Positives = 141/148 (95%)

Query: 1   MVTANKEMVVYCFDTLVAHYNKEEAPPPAFDEGRHPLFVTWKKVVNGGEPRLRGCIGSLE 60
           MVTANKEMVVYCFDTLVAHYN ++ P P+FD+G+HPLFVTWKKVVNGGEPRLRGCIGSLE
Sbjct: 1   MVTANKEMVVYCFDTLVAHYNGDQPPTPSFDDGQHPLFVTWKKVVNGGEPRLRGCIGSLE 60

Query: 61  ARDLINGFKDYALISALRDRRFPPIEAKELPLLECTVSILTDYETANDYLDWEVGKHGII 120
           AR LINGF+DYAL SALRDRRFPPIEA+ELPLLECTVSILTDYETANDYLDWEVGKHGII
Sbjct: 61  ARGLINGFRDYALTSALRDRRFPPIEARELPLLECTVSILTDYETANDYLDWEVGKHGII 120

Query: 121 LEFSDPDYNTRRSATYLPGVAAHEGWTK 148
           +EFSDPDYNTRRSATYLP VAAHEG+ K
Sbjct: 121 IEFSDPDYNTRRSATYLPEVAAHEGFIK 148