Miyakogusa Predicted Gene

Lj5g3v2237590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2237590.1 Non Characterized Hit- tr|C6TBX7|C6TBX7_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,73.13,4e-19,Q9SXG0_ORYSA_Q9SXG0;,NULL; coiled-coil,NULL,CUFF.56982.1
         (66 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g111840.1 | F1F0-ATPase inhibitor protein | HC | chr1:5057...    97   2e-21

>Medtr1g111840.1 | F1F0-ATPase inhibitor protein | HC |
          chr1:50574135-50571466 | 20130731
          Length = 85

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 55/67 (82%), Gaps = 1/67 (1%)

Query: 1  MDSTSRGAFTRCFSDKGKILSEEEQAKENVYIQKWERERLEKQKQQADKARAEKDKDSA- 59
          MDSTSRGA +R FS KGK+LSEEEQAKENVYIQKWERERLEKQK   DK +AEK  D+A 
Sbjct: 16 MDSTSRGASSRFFSGKGKVLSEEEQAKENVYIQKWERERLEKQKLAGDKGKAEKPTDNAD 75

Query: 60 NKKPGGA 66
          NKKP G 
Sbjct: 76 NKKPDGT 82