Miyakogusa Predicted Gene
- Lj5g3v2223370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2223370.1 Non Characterized Hit- tr|B9S9R9|B9S9R9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,26.4,1e-17,seg,NULL; coiled-coil,NULL,CUFF.56961.1
(1450 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g111660.2 | hypothetical protein | HC | chr1:50472618-5048... 653 0.0
Medtr1g111660.1 | hypothetical protein | HC | chr1:50472618-5048... 653 0.0
Medtr1g111690.1 | ubiquitin-binding WIYLD domain protein | LC | ... 162 2e-39
Medtr8g465700.1 | transcription factor jumonji (jmjC) domain pro... 80 2e-14
>Medtr1g111660.2 | hypothetical protein | HC | chr1:50472618-50480904
| 20130731
Length = 1568
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/621 (57%), Positives = 434/621 (69%), Gaps = 30/621 (4%)
Query: 799 KEVMADSFSEGVTGIGLPKYTDKNNTNITAGFPFTDPMDELNVGLAQRSPNSISLRQNGD 858
+EV+ADSFSE VT L +++DK+ TN F P D+ NV LAQ++PN+I L QNGD
Sbjct: 715 QEVLADSFSEAVTENDLLRHSDKSVTNFNVRFSSGSPTDDTNVDLAQQAPNTICLGQNGD 774
Query: 859 LLKQASLSEGKITGFSADFQIFRSSTESSTYDVEHSWPQHKRRKVETEREKFLHASSNLL 918
LL QA LS GK+T FS D F+SST+S T +VEHS QHKRRKVE EKFL S+ L
Sbjct: 775 LLPQALLSNGKVTNFSTDCHNFKSSTQSFTNNVEHSCSQHKRRKVEIATEKFLPDSTLLA 834
Query: 919 DKPLDSIDQRHVSRKLSVEEVNPEAVLEVQHLPSDQEDDIGHQYSSNNSLTGEMQNTRER 978
+KP+DSIDQR S S++E NPEAV+EVQHL DQ D IG Q++ NS T M++T ER
Sbjct: 835 EKPVDSIDQRPASGTSSIKEDNPEAVIEVQHLAYDQADSIGDQHT-RNSPTDAMEDTEER 893
Query: 979 QTIEGSSCKVRKDEKLILDGGDRIADTLKLAEANPSFCSVDPTRCSSIHEMAELTHRQVN 1038
+ +EGSS KVRK+EKLILDG R +D L L E NP S+D R + + E A H +VN
Sbjct: 894 KKMEGSSVKVRKEEKLILDGRGRSSDNLMLPETNPFSFSIDSMRFN-MDEKAGSWHLEVN 952
Query: 1039 SEHGSGENPSCIERSASSRRVYPGGNAEFSDCLSVSSGIRCLDLIDSDEAVPEFEGFIMQ 1098
S S E+ +C+ERS SSRR+ PGG+ EFSD LSVS G+R L+LI + EA+PEFEGF+MQ
Sbjct: 953 SGQDSAEHLTCVERSTSSRRINPGGDTEFSDGLSVSPGLRDLNLIGTGEALPEFEGFLMQ 1012
Query: 1099 TDNAQPCTAGDQVELERMDLPINSIDYASLSQSMSTHSPLSYSSTPYKLHDMTDLFQSVP 1158
TDNAQPCTA D++ELE + LP NS+DY SL +S +SP YSSTPYKLH + +L+QS+P
Sbjct: 1013 TDNAQPCTARDEMELESLSLPSNSVDYTSLGRSRFMYSPSCYSSTPYKLHSLANLYQSLP 1072
Query: 1159 NGLLEGFGLRNSIPLNDGSRRALSDCVPNRQGQYTCSVQTLWDRINSNHGSSGKRKSLKS 1218
NGLLEG+GLR S P DGS R+LSDC PN GQ+T SVQTLWDR NSN GSSGKRKS K
Sbjct: 1073 NGLLEGYGLRTSRPAYDGSPRSLSDCRPNCNGQFTSSVQTLWDRFNSNFGSSGKRKSSKP 1132
Query: 1219 ELPCISEENENVDEIEGTFDKGIGLEGMTGSITREPLTEIIDNSNPSTSVVQDNILTGGH 1278
ELPCI+EENENVDEI GTF +GIG EG+T SITR L +I+DN+NPSTSV+QD L G
Sbjct: 1133 ELPCINEENENVDEIAGTFQRGIGSEGITRSITRGLLADIVDNANPSTSVLQD-ALASGR 1191
Query: 1279 VDLVSTEFSFSGTQTKVKRKLGEQDGNR-RFTRKAKENQSLSFGA--------------- 1322
D VS+EF+F GT K+K+K Q+GN RF K KEN+S+ GA
Sbjct: 1192 KDSVSSEFNFDGTPNKIKKKPDMQNGNGIRFANKGKENKSVVNGAKRNSESVRKRSSRSK 1251
Query: 1323 -----------NGAKRTTPSMHKRSSRPKLSGKDSLRRQGAPNSEVKSARKNIVSNITSF 1371
NG KR + S+ KRSSR LSGK+SL+++ S KS R NIVSN+TSF
Sbjct: 1252 LSGKNSMKDPVNGTKRNSESVRKRSSRSNLSGKNSLKQRCPTFSGGKSTRSNIVSNLTSF 1311
Query: 1372 IPLVQQKQAAAVITGKRDIKV 1392
IPLVQQKQ AAV TGKR I V
Sbjct: 1312 IPLVQQKQTAAVFTGKRVINV 1332
Score = 609 bits (1570), Expect = e-174, Method: Compositional matrix adjust.
Identities = 350/703 (49%), Positives = 437/703 (62%), Gaps = 14/703 (1%)
Query: 1 MSAMEKHVAQIFDTTKRIIDQARHDCHLWEHHLFPKLLLNGILPPPWLCNSTLHPLASDP 60
MSA+EK++ QIFD KRII+ AR + LWEHHL PKL+LNGI PPPWL +S DP
Sbjct: 1 MSAIEKNLVQIFDRKKRIIEHARQESRLWEHHLLPKLILNGIPPPPWLTHS-------DP 53
Query: 61 KDLNKDDLVSEVLLSQPQFRVAVPGYKCSRSSNLDVVRDCVQYPVGSHNEVPALVKDCYP 120
KDLN+ ++VSE LLS+ QF + G +CS SNLD V + V YPVG NEV A D
Sbjct: 54 KDLNRHEVVSEGLLSRTQFGIPFTGQQCSLYSNLDAVFNGVHYPVGLRNEVCAFKNDSDM 113
Query: 121 GEGLSNLPECSVNNTGCASSGPAQLDCGAISPHNQRDPTVADSYHEPALSMAKLQRSKSR 180
G LS LP+CSVNN GCASS P +LD GAISP NQ +P V++S+H+PA+S+AKLQRS+SR
Sbjct: 114 GRRLSILPDCSVNNAGCASSDPPELDSGAISPQNQIEPRVSESFHDPAVSLAKLQRSRSR 173
Query: 181 QKALEQRNSAKAPKRLSVYDXXXXXXXXXXXXXXXXPTREEGHIKESDTVKDFQSNIQIC 240
QKALE+RNSA A RLS D P+ +E HIK+ V +FQ N Q
Sbjct: 174 QKALEERNSAIASNRLS-GDGDNAGDCTAAATGSAPPSLQEDHIKDLSLVNEFQPNSQSF 232
Query: 241 SMEEGRRGDGQTPK-EKSNYSGRITRSESFSQKFDSLNV-TSSIVKEDGLPPNNLDEALE 298
MEE RR D T K +SNYSGR TRS++ SQKF+S + TSS+ KEDG P N+L E +E
Sbjct: 233 LMEEVRREDCLTQKGSRSNYSGRKTRSKASSQKFNSSSAGTSSVEKEDGPPLNDLKEVME 292
Query: 299 IVNPPCFISGSCGAQEANKAGYQSKEAGSTEYDKRLTTSGNSSQARHHRELLKRDSTSAR 358
+VN P FI+ +CG QE N +Q+ E GS+ YDK L +SSQA H+ ELL DS+S R
Sbjct: 293 LVNRPSFINETCGVQEPNIIEFQNNEVGSSVYDKSLAKPKSSSQAEHNSELLNLDSSSGR 352
Query: 359 DKGVEACDLMLPNTTHIELTXXXXXXXXXXXXXXXXVEDGDFCDSKQENDIHXXXXXXXX 418
K VEA DL P +H+ELT V+DGDFC + QE++I
Sbjct: 353 YKVVEASDLKQP-CSHVELTDLSKTSDCINGSRRSIVKDGDFCQTNQESNIRSRLRLHKS 411
Query: 419 XXXXPGNDFIITDGSVKSINKSVQSPQHLVSQNLQDXXXXXXXXXXXXKDPELCAVKSKE 478
PG+DF T GSV SI+KSVQ Q L+S+NLQD K+P + A K+KE
Sbjct: 412 SCPSPGDDFFTTGGSVNSIDKSVQLLQPLISKNLQDPSVAIVGSFGSQKEPHISAGKTKE 471
Query: 479 RTSRSGSVKVXXXXXXXXXXXXXXXXXEQNATCSEPAGEKSQNVRPTEQGARRLSSSPKY 538
++SRSGS K E++A SE AG+KSQNV+ T+ RRLS+SPKY
Sbjct: 472 QSSRSGSGKAYLTRNSKFSKSPNSNSRERSAVRSESAGKKSQNVQLTKLDHRRLSTSPKY 531
Query: 539 SKIDIEVAMDSLEKENVAALSATKYTTAVTTCIDEGLLRPVXXXXXXXXXXXAESPNIET 598
SK+D+E++++S EKEN+A + A++ T AVT+ EG P+ AES I+
Sbjct: 532 SKLDVEISVNSAEKENIAEVGASRNTRAVTSHTTEG---PLISSSIDGGSLLAESLYIKA 588
Query: 599 AVAEKVLDAQENMMLGANPTGIAEHRSDATAAKVDTDFDGFFEKGPPCLGSRLTTGNPMV 658
AVAEK LD QEN+ N AEHRS AT AKV DFDG + P CLGSRL T NP V
Sbjct: 589 AVAEKDLDVQENIASDVNSNDNAEHRSAATNAKVHLDFDGLVDNEPSCLGSRLNTANPKV 648
Query: 659 EPDVPVLSLPSDFVMSMMPKQLDFDDVEEMRMDGIPSPDLEDG 701
DV VL L DFV+S++PKQL FDD EE DGI S DL++G
Sbjct: 649 REDVSVLRLSPDFVVSVIPKQLVFDDGEETNRDGIISLDLKEG 691
>Medtr1g111660.1 | hypothetical protein | HC | chr1:50472618-50483033
| 20130731
Length = 1568
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/621 (57%), Positives = 434/621 (69%), Gaps = 30/621 (4%)
Query: 799 KEVMADSFSEGVTGIGLPKYTDKNNTNITAGFPFTDPMDELNVGLAQRSPNSISLRQNGD 858
+EV+ADSFSE VT L +++DK+ TN F P D+ NV LAQ++PN+I L QNGD
Sbjct: 715 QEVLADSFSEAVTENDLLRHSDKSVTNFNVRFSSGSPTDDTNVDLAQQAPNTICLGQNGD 774
Query: 859 LLKQASLSEGKITGFSADFQIFRSSTESSTYDVEHSWPQHKRRKVETEREKFLHASSNLL 918
LL QA LS GK+T FS D F+SST+S T +VEHS QHKRRKVE EKFL S+ L
Sbjct: 775 LLPQALLSNGKVTNFSTDCHNFKSSTQSFTNNVEHSCSQHKRRKVEIATEKFLPDSTLLA 834
Query: 919 DKPLDSIDQRHVSRKLSVEEVNPEAVLEVQHLPSDQEDDIGHQYSSNNSLTGEMQNTRER 978
+KP+DSIDQR S S++E NPEAV+EVQHL DQ D IG Q++ NS T M++T ER
Sbjct: 835 EKPVDSIDQRPASGTSSIKEDNPEAVIEVQHLAYDQADSIGDQHT-RNSPTDAMEDTEER 893
Query: 979 QTIEGSSCKVRKDEKLILDGGDRIADTLKLAEANPSFCSVDPTRCSSIHEMAELTHRQVN 1038
+ +EGSS KVRK+EKLILDG R +D L L E NP S+D R + + E A H +VN
Sbjct: 894 KKMEGSSVKVRKEEKLILDGRGRSSDNLMLPETNPFSFSIDSMRFN-MDEKAGSWHLEVN 952
Query: 1039 SEHGSGENPSCIERSASSRRVYPGGNAEFSDCLSVSSGIRCLDLIDSDEAVPEFEGFIMQ 1098
S S E+ +C+ERS SSRR+ PGG+ EFSD LSVS G+R L+LI + EA+PEFEGF+MQ
Sbjct: 953 SGQDSAEHLTCVERSTSSRRINPGGDTEFSDGLSVSPGLRDLNLIGTGEALPEFEGFLMQ 1012
Query: 1099 TDNAQPCTAGDQVELERMDLPINSIDYASLSQSMSTHSPLSYSSTPYKLHDMTDLFQSVP 1158
TDNAQPCTA D++ELE + LP NS+DY SL +S +SP YSSTPYKLH + +L+QS+P
Sbjct: 1013 TDNAQPCTARDEMELESLSLPSNSVDYTSLGRSRFMYSPSCYSSTPYKLHSLANLYQSLP 1072
Query: 1159 NGLLEGFGLRNSIPLNDGSRRALSDCVPNRQGQYTCSVQTLWDRINSNHGSSGKRKSLKS 1218
NGLLEG+GLR S P DGS R+LSDC PN GQ+T SVQTLWDR NSN GSSGKRKS K
Sbjct: 1073 NGLLEGYGLRTSRPAYDGSPRSLSDCRPNCNGQFTSSVQTLWDRFNSNFGSSGKRKSSKP 1132
Query: 1219 ELPCISEENENVDEIEGTFDKGIGLEGMTGSITREPLTEIIDNSNPSTSVVQDNILTGGH 1278
ELPCI+EENENVDEI GTF +GIG EG+T SITR L +I+DN+NPSTSV+QD L G
Sbjct: 1133 ELPCINEENENVDEIAGTFQRGIGSEGITRSITRGLLADIVDNANPSTSVLQD-ALASGR 1191
Query: 1279 VDLVSTEFSFSGTQTKVKRKLGEQDGNR-RFTRKAKENQSLSFGA--------------- 1322
D VS+EF+F GT K+K+K Q+GN RF K KEN+S+ GA
Sbjct: 1192 KDSVSSEFNFDGTPNKIKKKPDMQNGNGIRFANKGKENKSVVNGAKRNSESVRKRSSRSK 1251
Query: 1323 -----------NGAKRTTPSMHKRSSRPKLSGKDSLRRQGAPNSEVKSARKNIVSNITSF 1371
NG KR + S+ KRSSR LSGK+SL+++ S KS R NIVSN+TSF
Sbjct: 1252 LSGKNSMKDPVNGTKRNSESVRKRSSRSNLSGKNSLKQRCPTFSGGKSTRSNIVSNLTSF 1311
Query: 1372 IPLVQQKQAAAVITGKRDIKV 1392
IPLVQQKQ AAV TGKR I V
Sbjct: 1312 IPLVQQKQTAAVFTGKRVINV 1332
Score = 609 bits (1570), Expect = e-174, Method: Compositional matrix adjust.
Identities = 350/703 (49%), Positives = 437/703 (62%), Gaps = 14/703 (1%)
Query: 1 MSAMEKHVAQIFDTTKRIIDQARHDCHLWEHHLFPKLLLNGILPPPWLCNSTLHPLASDP 60
MSA+EK++ QIFD KRII+ AR + LWEHHL PKL+LNGI PPPWL +S DP
Sbjct: 1 MSAIEKNLVQIFDRKKRIIEHARQESRLWEHHLLPKLILNGIPPPPWLTHS-------DP 53
Query: 61 KDLNKDDLVSEVLLSQPQFRVAVPGYKCSRSSNLDVVRDCVQYPVGSHNEVPALVKDCYP 120
KDLN+ ++VSE LLS+ QF + G +CS SNLD V + V YPVG NEV A D
Sbjct: 54 KDLNRHEVVSEGLLSRTQFGIPFTGQQCSLYSNLDAVFNGVHYPVGLRNEVCAFKNDSDM 113
Query: 121 GEGLSNLPECSVNNTGCASSGPAQLDCGAISPHNQRDPTVADSYHEPALSMAKLQRSKSR 180
G LS LP+CSVNN GCASS P +LD GAISP NQ +P V++S+H+PA+S+AKLQRS+SR
Sbjct: 114 GRRLSILPDCSVNNAGCASSDPPELDSGAISPQNQIEPRVSESFHDPAVSLAKLQRSRSR 173
Query: 181 QKALEQRNSAKAPKRLSVYDXXXXXXXXXXXXXXXXPTREEGHIKESDTVKDFQSNIQIC 240
QKALE+RNSA A RLS D P+ +E HIK+ V +FQ N Q
Sbjct: 174 QKALEERNSAIASNRLS-GDGDNAGDCTAAATGSAPPSLQEDHIKDLSLVNEFQPNSQSF 232
Query: 241 SMEEGRRGDGQTPK-EKSNYSGRITRSESFSQKFDSLNV-TSSIVKEDGLPPNNLDEALE 298
MEE RR D T K +SNYSGR TRS++ SQKF+S + TSS+ KEDG P N+L E +E
Sbjct: 233 LMEEVRREDCLTQKGSRSNYSGRKTRSKASSQKFNSSSAGTSSVEKEDGPPLNDLKEVME 292
Query: 299 IVNPPCFISGSCGAQEANKAGYQSKEAGSTEYDKRLTTSGNSSQARHHRELLKRDSTSAR 358
+VN P FI+ +CG QE N +Q+ E GS+ YDK L +SSQA H+ ELL DS+S R
Sbjct: 293 LVNRPSFINETCGVQEPNIIEFQNNEVGSSVYDKSLAKPKSSSQAEHNSELLNLDSSSGR 352
Query: 359 DKGVEACDLMLPNTTHIELTXXXXXXXXXXXXXXXXVEDGDFCDSKQENDIHXXXXXXXX 418
K VEA DL P +H+ELT V+DGDFC + QE++I
Sbjct: 353 YKVVEASDLKQP-CSHVELTDLSKTSDCINGSRRSIVKDGDFCQTNQESNIRSRLRLHKS 411
Query: 419 XXXXPGNDFIITDGSVKSINKSVQSPQHLVSQNLQDXXXXXXXXXXXXKDPELCAVKSKE 478
PG+DF T GSV SI+KSVQ Q L+S+NLQD K+P + A K+KE
Sbjct: 412 SCPSPGDDFFTTGGSVNSIDKSVQLLQPLISKNLQDPSVAIVGSFGSQKEPHISAGKTKE 471
Query: 479 RTSRSGSVKVXXXXXXXXXXXXXXXXXEQNATCSEPAGEKSQNVRPTEQGARRLSSSPKY 538
++SRSGS K E++A SE AG+KSQNV+ T+ RRLS+SPKY
Sbjct: 472 QSSRSGSGKAYLTRNSKFSKSPNSNSRERSAVRSESAGKKSQNVQLTKLDHRRLSTSPKY 531
Query: 539 SKIDIEVAMDSLEKENVAALSATKYTTAVTTCIDEGLLRPVXXXXXXXXXXXAESPNIET 598
SK+D+E++++S EKEN+A + A++ T AVT+ EG P+ AES I+
Sbjct: 532 SKLDVEISVNSAEKENIAEVGASRNTRAVTSHTTEG---PLISSSIDGGSLLAESLYIKA 588
Query: 599 AVAEKVLDAQENMMLGANPTGIAEHRSDATAAKVDTDFDGFFEKGPPCLGSRLTTGNPMV 658
AVAEK LD QEN+ N AEHRS AT AKV DFDG + P CLGSRL T NP V
Sbjct: 589 AVAEKDLDVQENIASDVNSNDNAEHRSAATNAKVHLDFDGLVDNEPSCLGSRLNTANPKV 648
Query: 659 EPDVPVLSLPSDFVMSMMPKQLDFDDVEEMRMDGIPSPDLEDG 701
DV VL L DFV+S++PKQL FDD EE DGI S DL++G
Sbjct: 649 REDVSVLRLSPDFVVSVIPKQLVFDDGEETNRDGIISLDLKEG 691
>Medtr1g111690.1 | ubiquitin-binding WIYLD domain protein | LC |
chr1:50505629-50509515 | 20130731
Length = 426
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 122/193 (63%), Gaps = 6/193 (3%)
Query: 800 EVMADSFSEGVTGIGLPKYTDKNNTNITAGFPFTDPMDELNVGLAQRSPNSISLRQNGDL 859
EV SFSE V L +TD N TN FPF P DE+NV Q++PN++S QNGDL
Sbjct: 197 EVPTYSFSEPVIDNCLLNHTDNNVTNFNVRFPFDAPTDEVNVDSEQQAPNTVSWGQNGDL 256
Query: 860 LKQASLSEGKITGFSADFQIFRSSTESSTYDVEHSWPQHKRRKVETEREKFLHASSNLLD 919
++Q+ LS G+IT FS F F+SS E DVEHS QHKRRK+ET EKF+ S++L++
Sbjct: 257 VRQSLLSNGEITSFSTGFNNFKSSAEGFANDVEHSCSQHKRRKIET--EKFVPDSTHLME 314
Query: 920 KPLDSIDQRHVSRKLSVEEVNPEAVLEVQHLPSDQEDDIGHQYSSNNSLTGEMQNTRERQ 979
K +D+IDQR S S++E NPEAV+ VQ DQ DDI H ++ M + RE Q
Sbjct: 315 KLVDTIDQRPASGTSSIKEDNPEAVIGVQRSTFDQADDIRHARMPADA----MVDAREIQ 370
Query: 980 TIEGSSCKVRKDE 992
+EG S KVRKDE
Sbjct: 371 EMEGPSWKVRKDE 383
>Medtr8g465700.1 | transcription factor jumonji (jmjC) domain
protein | LC | chr8:23436840-23438371 | 20130731
Length = 276
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 827 TAGFPFTDPMDELNVGLAQRSPNSISLRQNGDLLKQASLSEGKITGFSADFQIFRSSTES 886
FPF P+DE++V QR PN++S QNGDL++Q L ++TGFS DF F+SS E
Sbjct: 176 AVWFPFGAPIDEVSVDFEQRPPNTVSWGQNGDLVRQPLLRNREVTGFSTDFNNFKSSAEG 235
Query: 887 STYDVEHSWPQHKRRKVETEREKFLHASSNLLDKPLDSIDQRHVSRKLSVEE 938
T DVE Q+KRRK E K +DS+ QR S S++E
Sbjct: 236 FTNDVEDLCSQNKRRKFE---------------KLVDSMGQRPASGTSSIKE 272