Miyakogusa Predicted Gene

Lj5g3v2217220.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2217220.2 Non Characterized Hit- tr|I3S0W8|I3S0W8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.69,0,seg,NULL;
TRANSMEMBRANE PROTEIN HTP-1 RELATED,Uncharacterised protein family
UPF0016; UPF0016,Unchar,CUFF.57090.2
         (229 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g111390.1 | transmembrane protein PFT27 | HC | chr1:503285...   355   2e-98
Medtr7g079850.1 | GDT1-like protein | HC | chr7:30338141-3034186...   167   8e-42
Medtr1g046730.1 | GDT1-like protein | HC | chr1:17623011-1763196...   119   2e-27
Medtr5g009810.1 | GDT1-like protein | HC | chr5:2467567-2472426 ...    67   1e-11

>Medtr1g111390.1 | transmembrane protein PFT27 | HC |
           chr1:50328505-50332843 | 20130731
          Length = 227

 Score =  355 bits (911), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 179/227 (78%), Positives = 190/227 (83%)

Query: 1   MTSIVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGW 60
           M+SIVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL+GCL+ALIVMTILS LVGW
Sbjct: 1   MSSIVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLTGCLAALIVMTILSVLVGW 60

Query: 61  AAPNLVSRTWTHHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXKNWKAKNGASXX 120
           AAPNL+SR+W HHITT LF GFGLWSLKEAIF +G             K+WKAKNGA+  
Sbjct: 61  AAPNLISRSWAHHITTLLFFGFGLWSLKEAIFGEGESEELAEVEAELDKDWKAKNGATKD 120

Query: 121 XXXXXXXXXXXXRSFLSQFFSPIFLQAFSITFFGEWGDKSQLATIGLAADENPFGVVLGG 180
                       R FLSQFFSPI LQAFSITFFGEWGDKSQLATIGLAADENPFGVVLGG
Sbjct: 121 SKKVDDATKKHKRPFLSQFFSPILLQAFSITFFGEWGDKSQLATIGLAADENPFGVVLGG 180

Query: 181 ILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSFLSPV 227
           IL Q LCTTAAV+GGKSLASQISEKV+ LSGG+LFIVFGIQSFLSPV
Sbjct: 181 ILGQALCTTAAVIGGKSLASQISEKVIGLSGGILFIVFGIQSFLSPV 227


>Medtr7g079850.1 | GDT1-like protein | HC | chr7:30338141-30341860 |
           20130731
          Length = 284

 Score =  167 bits (423), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 131/228 (57%), Gaps = 27/228 (11%)

Query: 6   QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAAPNL 65
             F  SL+M ++SEIGD+TF  AA++AMRHP+ +VLSG LSALI+MT+LS  +G   PNL
Sbjct: 74  DAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNL 133

Query: 66  VSRTWTHHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXKNWKAKNGASXXXXXXX 125
           +S+  T+   T L+L FGL  L  A                    WK+   +S       
Sbjct: 134 ISKKHTNSAATVLYLFFGLRLLYIA--------------------WKSDPKSSQKKEMEE 173

Query: 126 XXX-------XXXXRSFLSQFFSPIFLQAFSITFFGEWGDKSQLATIGLAADENPFGVVL 178
                         R F S+F +PIFL++F +TF  EWGD+SQ+ATI LA  +N  GV  
Sbjct: 174 VEEKLEGGQGKTSFRRFFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAIGVAA 233

Query: 179 GGILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSFLSP 226
           G  +  T+CT+ AV+GG  LAS+IS++ VA  GG+LF+ F + S+  P
Sbjct: 234 GATIGHTICTSVAVVGGSMLASRISQRSVATVGGLLFLGFSLSSYFYP 281


>Medtr1g046730.1 | GDT1-like protein | HC | chr1:17623011-17631961 |
           20130731
          Length = 365

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 120/224 (53%), Gaps = 20/224 (8%)

Query: 7   GFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAAPNLV 66
           GFT +  +  +SEIGDKTFF AA+LAM++ + LVL G + AL +M+ILS ++G    ++ 
Sbjct: 151 GFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALALMSILSVVIGRIFQSVP 210

Query: 67  SRTWT-----HHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXKNWKAKNGASXXX 121
           ++  T      +    L L FGL S+K+A                  K+ K  + +S   
Sbjct: 211 AQFQTTLPIGEYAAVTLLLFFGLKSIKDA-------------WDLPSKDVKNGDNSSPEL 257

Query: 122 XXXXXXXXXXXRSFLSQFFSP--IFLQAFSITFFGEWGDKSQLATIGLAADENPFGVVLG 179
                           +  +P  I  ++FS+ FF EWGD+S LATI LAA ++P+GV  G
Sbjct: 258 DELAEAEELVKEKASQRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASG 317

Query: 180 GILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSF 223
            I    L T  A++GG  LA+ ISEK+V   GG LF++F I +F
Sbjct: 318 AIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLIFAIATF 361


>Medtr5g009810.1 | GDT1-like protein | HC | chr5:2467567-2472426 |
           20130731
          Length = 351

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 47/75 (62%)

Query: 145 LQAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGILAQTLCTTAAVMGGKSLASQISE 204
           +  F + F  EWGDKS  +TI LAA  +P GV+ G +    + T  AV+GG  L + +SE
Sbjct: 268 VSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLIAVLGGSLLGTFLSE 327

Query: 205 KVVALSGGVLFIVFG 219
           KV+A  GGVLF+VF 
Sbjct: 328 KVIAYIGGVLFLVFA 342



 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 7   GFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAAPNLV 66
           GF  +  +   SE+GDKTFF AA+LA R+   +V  G   AL  MT++S  +G       
Sbjct: 138 GFASAFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVALG------- 190

Query: 67  SRTWTHHITTFLFLGFGLWSLK 88
            RT+ H++   L   FG   L 
Sbjct: 191 -RTF-HYVDELLPFRFGETDLP 210