Miyakogusa Predicted Gene

Lj5g3v2217210.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2217210.2 Non Characterized Hit- tr|Q56X79|Q56X79_ARATH
Putative uncharacterized protein At1g25500
OS=Arabidop,65.52,0.0000002,Choline_transpo,Choline transporter-like;
seg,NULL; CTL2-RELATED,NULL; CTL TRANSPORTER,Choline
trans,CUFF.56942.2
         (302 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g111330.1 | plasma-membrane choline transporter family pro...   365   e-101
Medtr1g111330.2 | plasma-membrane choline transporter family pro...   365   e-101
Medtr5g054780.1 | plasma-membrane choline transporter family pro...   340   1e-93

>Medtr1g111330.1 | plasma-membrane choline transporter family
           protein | HC | chr1:50302012-50297718 | 20130731
          Length = 496

 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/258 (75%), Positives = 207/258 (80%)

Query: 36  VAVVEESRPWHDVFWXXXXXXXXXXXXXXXXXXXXNRFEQENRLNIDKYTSRFSENEAGL 95
           VA  E+SR WHDVFW                    NRFE+ENRLNIDKYT   + N AGL
Sbjct: 35  VAAAEQSRRWHDVFWLGIFVIHLIALGFLLGVLGLNRFEKENRLNIDKYTPGLTGNHAGL 94

Query: 96  TETYWPLYAAAAGVGTVLGWIWLLLLGSQATQMMKFSVHILTTYLAVISVLCFWAKQIFW 155
           TETYWPLYAAA G+GTVLGW WLLLLGSQATQMMK SVHILTTYLAVISVLCFW  QIFW
Sbjct: 95  TETYWPLYAAAGGIGTVLGWTWLLLLGSQATQMMKVSVHILTTYLAVISVLCFWTNQIFW 154

Query: 156 GVAFGIGASLQFLYVISVVDRLPFTMLVLQKAVKMVWSLPEVMRVSYAFXXXXXXXXXXX 215
           GVAF +GA+LQFLYVISV+DRLPFTMLVLQKAVKMVW+LPEVMRVSYAF           
Sbjct: 155 GVAFAVGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFAVLLWMALW 214

Query: 216 SFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAGS 275
           SFGAAGVVAS++ DGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREA S
Sbjct: 215 SFGAAGVVASNLSDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAAS 274

Query: 276 ISANSLKKSLQASFTTSF 293
           I ANSL KSLQ + TTSF
Sbjct: 275 IPANSLMKSLQYALTTSF 292


>Medtr1g111330.2 | plasma-membrane choline transporter family
           protein | HC | chr1:50302008-50297730 | 20130731
          Length = 354

 Score =  365 bits (937), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/258 (75%), Positives = 207/258 (80%)

Query: 36  VAVVEESRPWHDVFWXXXXXXXXXXXXXXXXXXXXNRFEQENRLNIDKYTSRFSENEAGL 95
           VA  E+SR WHDVFW                    NRFE+ENRLNIDKYT   + N AGL
Sbjct: 35  VAAAEQSRRWHDVFWLGIFVIHLIALGFLLGVLGLNRFEKENRLNIDKYTPGLTGNHAGL 94

Query: 96  TETYWPLYAAAAGVGTVLGWIWLLLLGSQATQMMKFSVHILTTYLAVISVLCFWAKQIFW 155
           TETYWPLYAAA G+GTVLGW WLLLLGSQATQMMK SVHILTTYLAVISVLCFW  QIFW
Sbjct: 95  TETYWPLYAAAGGIGTVLGWTWLLLLGSQATQMMKVSVHILTTYLAVISVLCFWTNQIFW 154

Query: 156 GVAFGIGASLQFLYVISVVDRLPFTMLVLQKAVKMVWSLPEVMRVSYAFXXXXXXXXXXX 215
           GVAF +GA+LQFLYVISV+DRLPFTMLVLQKAVKMVW+LPEVMRVSYAF           
Sbjct: 155 GVAFAVGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFAVLLWMALW 214

Query: 216 SFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAGS 275
           SFGAAGVVAS++ DGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREA S
Sbjct: 215 SFGAAGVVASNLSDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAAS 274

Query: 276 ISANSLKKSLQASFTTSF 293
           I ANSL KSLQ + TTSF
Sbjct: 275 IPANSLMKSLQYALTTSF 292


>Medtr5g054780.1 | plasma-membrane choline transporter family
           protein | HC | chr5:22571945-22576944 | 20130731
          Length = 491

 Score =  340 bits (871), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 187/281 (66%), Positives = 206/281 (73%), Gaps = 2/281 (0%)

Query: 13  ASIATANQSLAXXXXXXXXXXXEVAVVEESRPWHDVFWXXXXXXXXXXXXXXXXXXXXNR 72
           +S AT NQ              EV  +++ R WHDVFW                    NR
Sbjct: 8   SSTATNNQE--KYRKSGNNNISEVVNMDQKRRWHDVFWLILFVIQLIGVGFVLVILGVNR 65

Query: 73  FEQENRLNIDKYTSRFSENEAGLTETYWPLYAAAAGVGTVLGWIWLLLLGSQATQMMKFS 132
           F+++NRL+IDKYT RF ENEAGLTE YWPLYA A GVGT LGW WLLLLGS+A QMMK S
Sbjct: 66  FKKKNRLDIDKYTYRFMENEAGLTEDYWPLYAVAGGVGTALGWSWLLLLGSRAIQMMKVS 125

Query: 133 VHILTTYLAVISVLCFWAKQIFWGVAFGIGASLQFLYVISVVDRLPFTMLVLQKAVKMVW 192
           VHILTTYLAVISVLCFWA Q FWGVAF IGA+LQFLY+ISV+DRLPFTMLVLQKAVKMVW
Sbjct: 126 VHILTTYLAVISVLCFWAHQFFWGVAFAIGAALQFLYIISVIDRLPFTMLVLQKAVKMVW 185

Query: 193 SLPEVMRVSYAFXXXXXXXXXXXSFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCN 252
           +LPEVMRV+YAF           SFGAAGVVASSMGDGGRWWLLVV SVSLFWTGAVLCN
Sbjct: 186 NLPEVMRVAYAFMAVMLLWMALWSFGAAGVVASSMGDGGRWWLLVVLSVSLFWTGAVLCN 245

Query: 253 TVHVIVSGMVFLVLLHGGREAGSISANSLKKSLQASFTTSF 293
           TVHVIVSG +  V +HGG EA S+  NS+ KSLQ + TTSF
Sbjct: 246 TVHVIVSGSLIRVSIHGGCEAASLPTNSIMKSLQYALTTSF 286