Miyakogusa Predicted Gene

Lj5g3v2217210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2217210.1 Non Characterized Hit- tr|K3X0L3|K3X0L3_PYTUL
Uncharacterized protein OS=Pythium ultimum
GN=PYU1_G01,22.97,0.003,seg,NULL; CTL2-RELATED,NULL; CTL
TRANSPORTER,Choline transporter-like; Choline_transpo,Choline
trans,CUFF.56942.1
         (243 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g111330.2 | plasma-membrane choline transporter family pro...   273   1e-73
Medtr1g111330.1 | plasma-membrane choline transporter family pro...   273   1e-73
Medtr5g054780.1 | plasma-membrane choline transporter family pro...   268   5e-72

>Medtr1g111330.2 | plasma-membrane choline transporter family
           protein | HC | chr1:50302008-50297730 | 20130731
          Length = 354

 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/208 (71%), Positives = 159/208 (76%)

Query: 36  VAVVEESRPWHDVFWXXXXXXXXXXXXXXXXXXXXNRFEQENRLNIDKYTSRFSENEAGL 95
           VA  E+SR WHDVFW                    NRFE+ENRLNIDKYT   + N AGL
Sbjct: 35  VAAAEQSRRWHDVFWLGIFVIHLIALGFLLGVLGLNRFEKENRLNIDKYTPGLTGNHAGL 94

Query: 96  TETYWPLYAAAAGVGTVLGWIWLLLLGSQATQMMKFSVHILTTYLAVISVLCFWAKQIFW 155
           TETYWPLYAAA G+GTVLGW WLLLLGSQATQMMK SVHILTTYLAVISVLCFW  QIFW
Sbjct: 95  TETYWPLYAAAGGIGTVLGWTWLLLLGSQATQMMKVSVHILTTYLAVISVLCFWTNQIFW 154

Query: 156 GVAFGIGASLQFLYVISVVDRLPFTMLVLQKAVKMVWSLPEVMRVSYAFXXXXXXXXXXX 215
           GVAF +GA+LQFLYVISV+DRLPFTMLVLQKAVKMVW+LPEVMRVSYAF           
Sbjct: 155 GVAFAVGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFAVLLWMALW 214

Query: 216 SFGAAGVVASSMGDGGRWWLLVVSWFSL 243
           SFGAAGVVAS++ DGGRWWLLVV   SL
Sbjct: 215 SFGAAGVVASNLSDGGRWWLLVVFSVSL 242


>Medtr1g111330.1 | plasma-membrane choline transporter family
           protein | HC | chr1:50302012-50297718 | 20130731
          Length = 496

 Score =  273 bits (697), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/208 (71%), Positives = 159/208 (76%)

Query: 36  VAVVEESRPWHDVFWXXXXXXXXXXXXXXXXXXXXNRFEQENRLNIDKYTSRFSENEAGL 95
           VA  E+SR WHDVFW                    NRFE+ENRLNIDKYT   + N AGL
Sbjct: 35  VAAAEQSRRWHDVFWLGIFVIHLIALGFLLGVLGLNRFEKENRLNIDKYTPGLTGNHAGL 94

Query: 96  TETYWPLYAAAAGVGTVLGWIWLLLLGSQATQMMKFSVHILTTYLAVISVLCFWAKQIFW 155
           TETYWPLYAAA G+GTVLGW WLLLLGSQATQMMK SVHILTTYLAVISVLCFW  QIFW
Sbjct: 95  TETYWPLYAAAGGIGTVLGWTWLLLLGSQATQMMKVSVHILTTYLAVISVLCFWTNQIFW 154

Query: 156 GVAFGIGASLQFLYVISVVDRLPFTMLVLQKAVKMVWSLPEVMRVSYAFXXXXXXXXXXX 215
           GVAF +GA+LQFLYVISV+DRLPFTMLVLQKAVKMVW+LPEVMRVSYAF           
Sbjct: 155 GVAFAVGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFAVLLWMALW 214

Query: 216 SFGAAGVVASSMGDGGRWWLLVVSWFSL 243
           SFGAAGVVAS++ DGGRWWLLVV   SL
Sbjct: 215 SFGAAGVVASNLSDGGRWWLLVVFSVSL 242


>Medtr5g054780.1 | plasma-membrane choline transporter family
           protein | HC | chr5:22571945-22576944 | 20130731
          Length = 491

 Score =  268 bits (684), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 151/231 (65%), Positives = 165/231 (71%), Gaps = 2/231 (0%)

Query: 13  ASIATANQSLAXXXXXXXXXXXEVAVVEESRPWHDVFWXXXXXXXXXXXXXXXXXXXXNR 72
           +S AT NQ              EV  +++ R WHDVFW                    NR
Sbjct: 8   SSTATNNQE--KYRKSGNNNISEVVNMDQKRRWHDVFWLILFVIQLIGVGFVLVILGVNR 65

Query: 73  FEQENRLNIDKYTSRFSENEAGLTETYWPLYAAAAGVGTVLGWIWLLLLGSQATQMMKFS 132
           F+++NRL+IDKYT RF ENEAGLTE YWPLYA A GVGT LGW WLLLLGS+A QMMK S
Sbjct: 66  FKKKNRLDIDKYTYRFMENEAGLTEDYWPLYAVAGGVGTALGWSWLLLLGSRAIQMMKVS 125

Query: 133 VHILTTYLAVISVLCFWAKQIFWGVAFGIGASLQFLYVISVVDRLPFTMLVLQKAVKMVW 192
           VHILTTYLAVISVLCFWA Q FWGVAF IGA+LQFLY+ISV+DRLPFTMLVLQKAVKMVW
Sbjct: 126 VHILTTYLAVISVLCFWAHQFFWGVAFAIGAALQFLYIISVIDRLPFTMLVLQKAVKMVW 185

Query: 193 SLPEVMRVSYAFXXXXXXXXXXXSFGAAGVVASSMGDGGRWWLLVVSWFSL 243
           +LPEVMRV+YAF           SFGAAGVVASSMGDGGRWWLLVV   SL
Sbjct: 186 NLPEVMRVAYAFMAVMLLWMALWSFGAAGVVASSMGDGGRWWLLVVLSVSL 236