Miyakogusa Predicted Gene

Lj5g3v2182140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2182140.1 Non Characterized Hit- tr|B9SM05|B9SM05_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,68.42,0.000003,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; DUF1218,Protein of unknown function DUF12,CUFF.56870.1
         (193 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g109660.1 | fiber protein Fb34 | HC | chr1:49605079-496023...   293   9e-80
Medtr1g109700.1 | fiber protein Fb34 | LC | chr1:49614965-496128...   185   2e-47
Medtr4g089100.2 | fiber protein Fb34 | HC | chr4:35730320-357252...   139   2e-33
Medtr4g089100.1 | fiber protein Fb34 | HC | chr4:35730302-357253...   139   2e-33
Medtr4g089100.3 | fiber protein Fb34 | HC | chr4:35730320-357252...   139   2e-33
Medtr4g089100.4 | fiber protein Fb34 | HC | chr4:35730343-357252...   139   2e-33
Medtr2g079830.1 | fiber protein Fb34 | HC | chr2:33645377-336429...   137   4e-33
Medtr5g057670.1 | fiber protein Fb34 | HC | chr5:23809011-238049...   133   1e-31
Medtr5g057335.1 | fiber protein Fb34 | HC | chr5:23649474-236539...   133   1e-31
Medtr8g027455.1 | hypothetical protein | LC | chr8:9763400-97681...    95   3e-20
Medtr7g114270.1 | fiber protein Fb34 | LC | chr7:47160912-471612...    92   2e-19
Medtr1g109690.1 | fiber protein Fb34 | LC | chr1:49609891-496095...    82   4e-16
Medtr4g077250.1 | transmembrane protein, putative | HC | chr4:29...    67   9e-12
Medtr8g098920.1 | hypothetical protein | LC | chr8:41414588-4141...    54   8e-08
Medtr4g094850.1 | hypothetical protein | LC | chr4:39112865-3911...    51   8e-07

>Medtr1g109660.1 | fiber protein Fb34 | HC | chr1:49605079-49602362
           | 20130731
          Length = 193

 Score =  293 bits (749), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 136/170 (80%), Positives = 154/170 (90%)

Query: 24  GAERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGL 83
           GAERRRSEAKVVPDEYD++T+C YTTDASTVYG+AAF +LLLS  +LN VTRC CCGKGL
Sbjct: 24  GAERRRSEAKVVPDEYDERTFCVYTTDASTVYGVAAFSLLLLSQTVLNAVTRCLCCGKGL 83

Query: 84  VSGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFA 143
           +SGCSTT A++F+ILSW  FL AEACLLAGSA+NAYHTKYR +F  HDLSC+TLRKGVFA
Sbjct: 84  ISGCSTTCAVIFFILSWTGFLAAEACLLAGSARNAYHTKYRGNFVTHDLSCATLRKGVFA 143

Query: 144 AGAALTLFSMLVSILYYWAHSKADTGFWEKHRNEGLGLATHHQGADSDKP 193
           AGAALTLFSML SILYYWAH+KADTGFWEKH+NEG+GLATH+ G +SDKP
Sbjct: 144 AGAALTLFSMLASILYYWAHAKADTGFWEKHQNEGIGLATHNHGPESDKP 193


>Medtr1g109700.1 | fiber protein Fb34 | LC | chr1:49614965-49612840
           | 20130731
          Length = 190

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/163 (58%), Positives = 115/163 (70%), Gaps = 3/163 (1%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AE  R  A+ +P+  DD T C YTTDAST YG  AF  LL++   LN++TRCFCCGKGLV
Sbjct: 25  AEVNRYWAEELPN--DDGTICVYTTDASTFYGFVAFSFLLVNQVFLNLITRCFCCGKGLV 82

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
            G ST+ AI+ YILSW+ FL AEACLL GS  +AY TKY+  +    LSCS LRKGVFA 
Sbjct: 83  PGRSTSCAIICYILSWIGFLAAEACLLVGSTTSAYKTKYQGYYSTLGLSCSALRKGVFAV 142

Query: 145 GAALTLFSMLVSILYYWAHSKADTG-FWEKHRNEGLGLATHHQ 186
           GA LTLFSML SILYYWA+ KAD   FW +H+NE + + T + 
Sbjct: 143 GAVLTLFSMLTSILYYWAYCKADIADFWMRHQNEDIEMDTRNH 185


>Medtr4g089100.2 | fiber protein Fb34 | HC | chr4:35730320-35725261
           | 20130731
          Length = 183

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 103/160 (64%), Gaps = 2/160 (1%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AE+RRS A +  +  + + YC+Y +D +T  G+ +  IL+ S  I+ VVTRC CCG+ + 
Sbjct: 24  AEQRRSSANLAKN-IEGRKYCQYDSDIATGLGVGSLFILVASQVIIMVVTRCLCCGRAMR 82

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
              S ++AI  +I +WL+FL A +CLLAGS KNAYHTKYR   G    SC TLRKGVF A
Sbjct: 83  PSGSRSWAICLFITTWLTFLIAASCLLAGSVKNAYHTKYRDLLGERAPSCQTLRKGVFGA 142

Query: 145 GAALTLFSMLVSILYYWAHSKADTGFWEKH-RNEGLGLAT 183
           GAA  + + +VS LYY + SKA+ G    + R+ G+ ++ 
Sbjct: 143 GAAFIVLTGIVSELYYVSFSKANNGGVPPYARDTGVTMSN 182


>Medtr4g089100.1 | fiber protein Fb34 | HC | chr4:35730302-35725376
           | 20130731
          Length = 183

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 103/160 (64%), Gaps = 2/160 (1%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AE+RRS A +  +  + + YC+Y +D +T  G+ +  IL+ S  I+ VVTRC CCG+ + 
Sbjct: 24  AEQRRSSANLAKN-IEGRKYCQYDSDIATGLGVGSLFILVASQVIIMVVTRCLCCGRAMR 82

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
              S ++AI  +I +WL+FL A +CLLAGS KNAYHTKYR   G    SC TLRKGVF A
Sbjct: 83  PSGSRSWAICLFITTWLTFLIAASCLLAGSVKNAYHTKYRDLLGERAPSCQTLRKGVFGA 142

Query: 145 GAALTLFSMLVSILYYWAHSKADTGFWEKH-RNEGLGLAT 183
           GAA  + + +VS LYY + SKA+ G    + R+ G+ ++ 
Sbjct: 143 GAAFIVLTGIVSELYYVSFSKANNGGVPPYARDTGVTMSN 182


>Medtr4g089100.3 | fiber protein Fb34 | HC | chr4:35730320-35725261
           | 20130731
          Length = 183

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 103/160 (64%), Gaps = 2/160 (1%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AE+RRS A +  +  + + YC+Y +D +T  G+ +  IL+ S  I+ VVTRC CCG+ + 
Sbjct: 24  AEQRRSSANLAKN-IEGRKYCQYDSDIATGLGVGSLFILVASQVIIMVVTRCLCCGRAMR 82

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
              S ++AI  +I +WL+FL A +CLLAGS KNAYHTKYR   G    SC TLRKGVF A
Sbjct: 83  PSGSRSWAICLFITTWLTFLIAASCLLAGSVKNAYHTKYRDLLGERAPSCQTLRKGVFGA 142

Query: 145 GAALTLFSMLVSILYYWAHSKADTGFWEKH-RNEGLGLAT 183
           GAA  + + +VS LYY + SKA+ G    + R+ G+ ++ 
Sbjct: 143 GAAFIVLTGIVSELYYVSFSKANNGGVPPYARDTGVTMSN 182


>Medtr4g089100.4 | fiber protein Fb34 | HC | chr4:35730343-35725261
           | 20130731
          Length = 183

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 103/160 (64%), Gaps = 2/160 (1%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AE+RRS A +  +  + + YC+Y +D +T  G+ +  IL+ S  I+ VVTRC CCG+ + 
Sbjct: 24  AEQRRSSANLAKN-IEGRKYCQYDSDIATGLGVGSLFILVASQVIIMVVTRCLCCGRAMR 82

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
              S ++AI  +I +WL+FL A +CLLAGS KNAYHTKYR   G    SC TLRKGVF A
Sbjct: 83  PSGSRSWAICLFITTWLTFLIAASCLLAGSVKNAYHTKYRDLLGERAPSCQTLRKGVFGA 142

Query: 145 GAALTLFSMLVSILYYWAHSKADTGFWEKH-RNEGLGLAT 183
           GAA  + + +VS LYY + SKA+ G    + R+ G+ ++ 
Sbjct: 143 GAAFIVLTGIVSELYYVSFSKANNGGVPPYARDTGVTMSN 182


>Medtr2g079830.1 | fiber protein Fb34 | HC | chr2:33645377-33642906
           | 20130731
          Length = 186

 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/147 (52%), Positives = 100/147 (68%)

Query: 24  GAERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGL 83
            AE+RRS AK+VPD+  +  YC Y +D +T YG+ AFL L++S  ++ VV+RCFCCGK L
Sbjct: 23  AAEQRRSTAKIVPDKEQNYNYCVYDSDRATGYGVVAFLFLMISQIVIMVVSRCFCCGKPL 82

Query: 84  VSGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFA 143
             G S   AI+ +I+ W+ F+ AE CLLAGS +NAYHTKYR  F +   SC T+RKGVFA
Sbjct: 83  KPGGSRACAIVLFIVCWVFFIIAEVCLLAGSVENAYHTKYRTLFVSDPPSCETVRKGVFA 142

Query: 144 AGAALTLFSMLVSILYYWAHSKADTGF 170
           AGAA   F+ +VS  YY  +S A   F
Sbjct: 143 AGAAFVFFTSIVSKFYYINYSSARESF 169


>Medtr5g057670.1 | fiber protein Fb34 | HC | chr5:23809011-23804986
           | 20130731
          Length = 191

 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 96/153 (62%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AERRRS   +      ++TYC Y++D +T YG+ AFL LL    +L  VT+C C G+ L 
Sbjct: 28  AERRRSVGTIHKTPGTNETYCVYSSDVATGYGVGAFLFLLSGESLLMGVTKCMCFGRPLT 87

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
            G +  ++I++++ SW +FL AE+CL+AG+ KNAYHTKYR    A + SC +LRKG+F  
Sbjct: 88  PGGNRAWSIIYFLSSWATFLVAESCLIAGAKKNAYHTKYRGIIYAQNFSCESLRKGIFIT 147

Query: 145 GAALTLFSMLVSILYYWAHSKADTGFWEKHRNE 177
           GA   + +M++++ YY   +KA T    +  N 
Sbjct: 148 GAIFIVVTMVLNVYYYMYFTKATTTPLSQKTNR 180


>Medtr5g057335.1 | fiber protein Fb34 | HC | chr5:23649474-23653955
           | 20130731
          Length = 191

 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 96/153 (62%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AERRRS   +      ++TYC Y++D +T YG+ AFL LL    +L  VT+C C G+ L 
Sbjct: 28  AERRRSVGTIHKTPGTNETYCVYSSDVATGYGVGAFLFLLSGESLLMGVTKCMCFGRPLT 87

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
            G +  ++I++++ SW +FL AE+CL+AG+ KNAYHTKYR    A + SC +LRKG+F  
Sbjct: 88  PGGNRAWSIIYFLSSWATFLVAESCLIAGAKKNAYHTKYRGIIYAQNFSCESLRKGIFIT 147

Query: 145 GAALTLFSMLVSILYYWAHSKADTGFWEKHRNE 177
           GA   + +M++++ YY   +KA T    +  N 
Sbjct: 148 GAIFIVVTMVLNVYYYMYFTKATTTPLSQKTNR 180


>Medtr8g027455.1 | hypothetical protein | LC | chr8:9763400-9768134
           | 20130731
          Length = 431

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/70 (64%), Positives = 54/70 (77%)

Query: 32  AKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLVSGCSTTF 91
           AKVVPDEYDD+T+C YT DASTV+G+AAF +LLLS  + N VT C CCGKGL+SGCST  
Sbjct: 319 AKVVPDEYDDRTFCVYTMDASTVFGVAAFSLLLLSQTVRNTVTSCLCCGKGLISGCSTIC 378

Query: 92  AILFYILSWL 101
           A   ++ S L
Sbjct: 379 AKHSHLASEL 388


>Medtr7g114270.1 | fiber protein Fb34 | LC |
          chr7:47160912-47161230 | 20130731
          Length = 70

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 5/73 (6%)

Query: 25 AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
          +E +++ AKVVPDEYDD+T+C YT DAST     AF +LLLS  + N VT C CCGKGL+
Sbjct: 2  SETQQTRAKVVPDEYDDRTFCVYTMDAST-----AFSLLLLSQTVRNTVTSCLCCGKGLI 56

Query: 85 SGCSTTFAILFYI 97
          SGCSTT A++F +
Sbjct: 57 SGCSTTCAVIFIL 69


>Medtr1g109690.1 | fiber protein Fb34 | LC | chr1:49609891-49609504
           | 20130731
          Length = 98

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 2/75 (2%)

Query: 26  ERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLVS 85
           E  R  A  +P+   D+T C Y TD ST+YG  AF  LL++   LN++TRCFCCGKGL+S
Sbjct: 26  EENRIWALEIPNV--DETICVYDTDDSTIYGFGAFFCLLINQVFLNLITRCFCCGKGLIS 83

Query: 86  GCSTTFAILFYILSW 100
           G + T AI+ YILSW
Sbjct: 84  GRANTCAIISYILSW 98


>Medtr4g077250.1 | transmembrane protein, putative | HC |
           chr4:29600281-29602521 | 20130731
          Length = 211

 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38  EYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGK-GLVSGCSTTFAILFY 96
           ++ +   C Y    +   GL A L L++S  ++NV T C CC K   +   + T A+  +
Sbjct: 37  QFINPNQCIYPRSPALPLGLTAALSLMISQIVINVSTGCICCRKSSRIPDSNWTVALACF 96

Query: 97  ILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAAGAALTLFSMLVS 156
           +LSW +++ A   LL G+A N    +    FG +   C  ++ GVFA GA L+L S++  
Sbjct: 97  VLSWFTYVIAFLLLLTGAALNDQRGEESVYFGTY--YCYVVKPGVFAGGAILSLASVVFG 154

Query: 157 ILYY---WAHSKADTGFWE-KHRNEG 178
           I+YY        A T F +  + N+G
Sbjct: 155 IVYYITLMEGKNARTPFGDSSYPNQG 180


>Medtr8g098920.1 | hypothetical protein | LC |
           chr8:41414588-41413778 | 20130731
          Length = 149

 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 27/34 (79%)

Query: 47  YTTDASTVYGLAAFLILLLSHGILNVVTRCFCCG 80
           YTTDAST+Y +AAF +LLLS  +LN  TRC CCG
Sbjct: 101 YTTDASTIYNVAAFSLLLLSQTVLNAATRCLCCG 134


>Medtr4g094850.1 | hypothetical protein | LC |
           chr4:39112865-39111292 | 20130731
          Length = 138

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 25/34 (73%)

Query: 47  YTTDASTVYGLAAFLILLLSHGILNVVTRCFCCG 80
           YTTD S VY +AAF +LLLS  +LN  TRC CCG
Sbjct: 90  YTTDTSIVYSVAAFSLLLLSQTVLNAATRCLCCG 123