Miyakogusa Predicted Gene

Lj5g3v2179930.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2179930.2 Non Characterized Hit- tr|J9J224|J9J224_9SPIT
Uncharacterized protein OS=Oxytricha trifallax PE=4 SV,32.28,4e-18,no
description,Rossmann-like alpha/beta/alpha sandwich fold; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NA,CUFF.56857.2
         (328 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g109590.1 | nucleotidyltransferase | HC | chr1:49560173-49...   607   e-174
Medtr1g109590.3 | nucleotidyltransferase | HC | chr1:49560173-49...   607   e-174
Medtr1g109590.2 | nucleotidyltransferase | HC | chr1:49560173-49...   466   e-131

>Medtr1g109590.1 | nucleotidyltransferase | HC |
           chr1:49560173-49567379 | 20130731
          Length = 382

 Score =  607 bits (1564), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 287/327 (87%), Positives = 307/327 (93%)

Query: 1   MSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKLSKPGSPVVGVGFTGSLASSRPKQGEH 60
           MS+IQL  KIP  FCSQQTA+DMAL+AYNRALKLS PGSPV+GVGFTGSLAS RPK GEH
Sbjct: 55  MSLIQLLAKIPLHFCSQQTADDMALLAYNRALKLSSPGSPVIGVGFTGSLASGRPKHGEH 114

Query: 61  RFYMSTRTADRLWISKVTLAKGLRSREEEDKISSHLLLKAIANACKVPATSSPGLSESDV 120
           RFYMSTRTADRLWISKVTL KGLR+REEED++SSHLLLKAIANACKVP+   P LSESDV
Sbjct: 115 RFYMSTRTADRLWISKVTLTKGLRTREEEDRVSSHLLLKAIANACKVPSNDIPELSESDV 174

Query: 121 SDESEKQFNEDQELEQLINGQICYKIYPFGSEIPAERKIILPGSFNPLHDGHLKLMEVAT 180
           SDE  KQFNEDQELEQLINGQIC+KIYPF SEIPAERKIILPGSFNPLHDGH+KLMEVAT
Sbjct: 175 SDECVKQFNEDQELEQLINGQICFKIYPFRSEIPAERKIILPGSFNPLHDGHIKLMEVAT 234

Query: 181 CICGDVYPCFEISAVNADKPPLSVSEIRDRVEQFEKVGKTVIISNQPYFYKKAELFPGSA 240
            ICGD YPCFE+SAVNADKPPLSVS+I+DRV QFEKVG+TVIISNQPYFYKKAELFPGSA
Sbjct: 235 RICGDGYPCFELSAVNADKPPLSVSQIKDRVNQFEKVGQTVIISNQPYFYKKAELFPGSA 294

Query: 241 FVIGADTAVRLINPKYYDGDYNKMLKILIGCRDTGCTFLVGGRNVDGAFKVLDDLDIPEE 300
           FVIGADTAVRLINPKYYDGDYNKMLKIL GC++TGCTFLV GRNVDGAFKVLDDL++PEE
Sbjct: 295 FVIGADTAVRLINPKYYDGDYNKMLKILGGCKETGCTFLVAGRNVDGAFKVLDDLNVPEE 354

Query: 301 LKDMFISIPAEKFRMDISSTEIRKRSG 327
           LKDMFISIPAE+FRMDISSTEIRK+SG
Sbjct: 355 LKDMFISIPAEQFRMDISSTEIRKKSG 381


>Medtr1g109590.3 | nucleotidyltransferase | HC |
           chr1:49560173-49567379 | 20130731
          Length = 382

 Score =  607 bits (1564), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 287/327 (87%), Positives = 307/327 (93%)

Query: 1   MSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKLSKPGSPVVGVGFTGSLASSRPKQGEH 60
           MS+IQL  KIP  FCSQQTA+DMAL+AYNRALKLS PGSPV+GVGFTGSLAS RPK GEH
Sbjct: 55  MSLIQLLAKIPLHFCSQQTADDMALLAYNRALKLSSPGSPVIGVGFTGSLASGRPKHGEH 114

Query: 61  RFYMSTRTADRLWISKVTLAKGLRSREEEDKISSHLLLKAIANACKVPATSSPGLSESDV 120
           RFYMSTRTADRLWISKVTL KGLR+REEED++SSHLLLKAIANACKVP+   P LSESDV
Sbjct: 115 RFYMSTRTADRLWISKVTLTKGLRTREEEDRVSSHLLLKAIANACKVPSNDIPELSESDV 174

Query: 121 SDESEKQFNEDQELEQLINGQICYKIYPFGSEIPAERKIILPGSFNPLHDGHLKLMEVAT 180
           SDE  KQFNEDQELEQLINGQIC+KIYPF SEIPAERKIILPGSFNPLHDGH+KLMEVAT
Sbjct: 175 SDECVKQFNEDQELEQLINGQICFKIYPFRSEIPAERKIILPGSFNPLHDGHIKLMEVAT 234

Query: 181 CICGDVYPCFEISAVNADKPPLSVSEIRDRVEQFEKVGKTVIISNQPYFYKKAELFPGSA 240
            ICGD YPCFE+SAVNADKPPLSVS+I+DRV QFEKVG+TVIISNQPYFYKKAELFPGSA
Sbjct: 235 RICGDGYPCFELSAVNADKPPLSVSQIKDRVNQFEKVGQTVIISNQPYFYKKAELFPGSA 294

Query: 241 FVIGADTAVRLINPKYYDGDYNKMLKILIGCRDTGCTFLVGGRNVDGAFKVLDDLDIPEE 300
           FVIGADTAVRLINPKYYDGDYNKMLKIL GC++TGCTFLV GRNVDGAFKVLDDL++PEE
Sbjct: 295 FVIGADTAVRLINPKYYDGDYNKMLKILGGCKETGCTFLVAGRNVDGAFKVLDDLNVPEE 354

Query: 301 LKDMFISIPAEKFRMDISSTEIRKRSG 327
           LKDMFISIPAE+FRMDISSTEIRK+SG
Sbjct: 355 LKDMFISIPAEQFRMDISSTEIRKKSG 381


>Medtr1g109590.2 | nucleotidyltransferase | HC |
           chr1:49560173-49566423 | 20130731
          Length = 312

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/253 (87%), Positives = 235/253 (92%)

Query: 1   MSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKLSKPGSPVVGVGFTGSLASSRPKQGEH 60
           MS+IQL  KIP  FCSQQTA+DMAL+AYNRALKLS PGSPV+GVGFTGSLAS RPK GEH
Sbjct: 55  MSLIQLLAKIPLHFCSQQTADDMALLAYNRALKLSSPGSPVIGVGFTGSLASGRPKHGEH 114

Query: 61  RFYMSTRTADRLWISKVTLAKGLRSREEEDKISSHLLLKAIANACKVPATSSPGLSESDV 120
           RFYMSTRTADRLWISKVTL KGLR+REEED++SSHLLLKAIANACKVP+   P LSESDV
Sbjct: 115 RFYMSTRTADRLWISKVTLTKGLRTREEEDRVSSHLLLKAIANACKVPSNDIPELSESDV 174

Query: 121 SDESEKQFNEDQELEQLINGQICYKIYPFGSEIPAERKIILPGSFNPLHDGHLKLMEVAT 180
           SDE  KQFNEDQELEQLINGQIC+KIYPF SEIPAERKIILPGSFNPLHDGH+KLMEVAT
Sbjct: 175 SDECVKQFNEDQELEQLINGQICFKIYPFRSEIPAERKIILPGSFNPLHDGHIKLMEVAT 234

Query: 181 CICGDVYPCFEISAVNADKPPLSVSEIRDRVEQFEKVGKTVIISNQPYFYKKAELFPGSA 240
            ICGD YPCFE+SAVNADKPPLSVS+I+DRV QFEKVG+TVIISNQPYFYKKAELFPGSA
Sbjct: 235 RICGDGYPCFELSAVNADKPPLSVSQIKDRVNQFEKVGQTVIISNQPYFYKKAELFPGSA 294

Query: 241 FVIGADTAVRLIN 253
           FVIGADTAVRLIN
Sbjct: 295 FVIGADTAVRLIN 307