Miyakogusa Predicted Gene

Lj5g3v2179680.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2179680.1 Non Characterized Hit- tr|A3A1G1|A3A1G1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,89.13,3e-16,seg,NULL; AA_permease_2,NULL; AMINO ACID
PERMEASE-RELATED,NULL; AMINO ACID TRANSPORTER,Amino
acid/po,CUFF.56851.1
         (432 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g109380.1 | amino-acid permease BAT1-like protein | HC | c...   724   0.0  
Medtr1g109390.1 | amino-acid permease BAT1-like protein | HC | c...   706   0.0  
Medtr3g096760.1 | amino acid permease | HC | chr3:44281053-44284...   357   1e-98
Medtr3g096760.2 | amino acid permease | HC | chr3:44281053-44284...   357   1e-98

>Medtr1g109380.1 | amino-acid permease BAT1-like protein | HC |
           chr1:49465003-49460060 | 20130731
          Length = 520

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/432 (87%), Positives = 401/432 (92%)

Query: 1   MLVALSMAEICSSYPTSGGLYYWSAKLAGPGWAPFASWITGWFNIVGQWAVTTSVDFSLA 60
           MLVALSMAEICSSYPTSGGLYYWSAKLAGP WAPFASWITGWFNIVGQWAVTTSVDFSLA
Sbjct: 84  MLVALSMAEICSSYPTSGGLYYWSAKLAGPNWAPFASWITGWFNIVGQWAVTTSVDFSLA 143

Query: 61  QLIQVIILLSTGGKNGGGYEANKYVTIAFHAGLLVLHGIINSLPISWLSFLGQLAAIWNV 120
           QLIQVIILLSTGGKNGGGYE +KYVTIA H G+LVLHGIINSLPISWLSFLGQLAA WNV
Sbjct: 144 QLIQVIILLSTGGKNGGGYEGSKYVTIAIHGGILVLHGIINSLPISWLSFLGQLAAFWNV 203

Query: 121 LGVFVLMIAIPSVATERASAKFVFTHFNTDNGEGINSKPYIFLLGLLMSQYTLTGYDASA 180
           LGVFVLMI IP VA ERASAKFVFTHFN+DNGEGINSKPYIFL+GLLMSQYTLTGYDASA
Sbjct: 204 LGVFVLMIIIPCVAPERASAKFVFTHFNSDNGEGINSKPYIFLVGLLMSQYTLTGYDASA 263

Query: 181 HMTEETKDADRNGPKXXXXXXXXXXXXXWGYILGITFAVTDIPYLLNENNDAGGYAIAEI 240
           HMTEET+DAD NGPK             WGYILGITFAVTDIPYLLNENN+AGGYAIAEI
Sbjct: 264 HMTEETRDADINGPKGIISAVGISVLAGWGYILGITFAVTDIPYLLNENNEAGGYAIAEI 323

Query: 241 FYMAFKRRYGHGIGGIICLAIVAVAIFFCGMSSVTSNSRMVYAFSRDGAMPLSSLWHKVN 300
           FY+AFKRRYGHGIGGIICL I+AVAIFFCGM SVT+NSRM YAFSRDGAMPLSSLWHKVN
Sbjct: 324 FYLAFKRRYGHGIGGIICLGIIAVAIFFCGMGSVTANSRMAYAFSRDGAMPLSSLWHKVN 383

Query: 301 KQEVPIYAVWLSVLISFCMALTSLGSMVAFQAMVSIATIGLYIAYALPIFFRVTLAQKRF 360
           KQEVP+ AVWLSVLISFCMAL SLGS+VAF+AMVSIA IGLYIAYALPIFFRVTLA+KRF
Sbjct: 384 KQEVPVNAVWLSVLISFCMALPSLGSIVAFEAMVSIAVIGLYIAYALPIFFRVTLARKRF 443

Query: 361 VPGPFNLGRYGVIVGWIAVLWVVTISILFSLPVSYPITIETLNYTPVAVGCLLILVVSYW 420
           + GPFNLGRYG +VGWIAV+WV TISILFSLPVSYPITIETLNYTPVAVGCLLI+V+SYW
Sbjct: 444 IAGPFNLGRYGFVVGWIAVIWVATISILFSLPVSYPITIETLNYTPVAVGCLLIIVLSYW 503

Query: 421 IISGRRWFKGPV 432
           ++SGRRWFKGP+
Sbjct: 504 VLSGRRWFKGPI 515


>Medtr1g109390.1 | amino-acid permease BAT1-like protein | HC |
           chr1:49471955-49467596 | 20130731
          Length = 518

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/432 (83%), Positives = 388/432 (89%)

Query: 1   MLVALSMAEICSSYPTSGGLYYWSAKLAGPGWAPFASWITGWFNIVGQWAVTTSVDFSLA 60
           MLVALSMAEICS++PTSGGLYYWSAKLAG  WAPFASWITGWFNI+G WA TTSVDFSLA
Sbjct: 82  MLVALSMAEICSAFPTSGGLYYWSAKLAGSKWAPFASWITGWFNIIGLWAGTTSVDFSLA 141

Query: 61  QLIQVIILLSTGGKNGGGYEANKYVTIAFHAGLLVLHGIINSLPISWLSFLGQLAAIWNV 120
           QLIQVIILLSTGGKNGGGY A+KYV IA H  +L+LHGIINSLPIS LSFLGQL+AIWNV
Sbjct: 142 QLIQVIILLSTGGKNGGGYVASKYVIIAIHGAILLLHGIINSLPISLLSFLGQLSAIWNV 201

Query: 121 LGVFVLMIAIPSVATERASAKFVFTHFNTDNGEGINSKPYIFLLGLLMSQYTLTGYDASA 180
            GVFVLMI IPSVATERAS KFVFTHFN +NG+GINS+P +FLLGLLMSQYTL+GYDASA
Sbjct: 202 FGVFVLMILIPSVATERASNKFVFTHFNAENGDGINSRPCMFLLGLLMSQYTLSGYDASA 261

Query: 181 HMTEETKDADRNGPKXXXXXXXXXXXXXWGYILGITFAVTDIPYLLNENNDAGGYAIAEI 240
           HMTEETK ADRNGPK             WGYI+GIT+AVTDIPYLL+ENNDAGGYAIAEI
Sbjct: 262 HMTEETKGADRNGPKGIISAVGISIIVGWGYIIGITYAVTDIPYLLSENNDAGGYAIAEI 321

Query: 241 FYMAFKRRYGHGIGGIICLAIVAVAIFFCGMSSVTSNSRMVYAFSRDGAMPLSSLWHKVN 300
           FY  FK RYG+GIGGIICL IVAVAIFFCGM SVTS SRM YAFSRDGAMP SSLWHKVN
Sbjct: 322 FYQVFKTRYGNGIGGIICLGIVAVAIFFCGMGSVTSVSRMAYAFSRDGAMPFSSLWHKVN 381

Query: 301 KQEVPIYAVWLSVLISFCMALTSLGSMVAFQAMVSIATIGLYIAYALPIFFRVTLAQKRF 360
            Q+VPIYAVWLSV ISFCMALTSLGS+VAF+AMVSIA I LYIAYALPIFFRVTLA+K F
Sbjct: 382 NQDVPIYAVWLSVFISFCMALTSLGSIVAFEAMVSIAVIDLYIAYALPIFFRVTLARKYF 441

Query: 361 VPGPFNLGRYGVIVGWIAVLWVVTISILFSLPVSYPITIETLNYTPVAVGCLLILVVSYW 420
           VPGPFNLGRYG+IVGW+AV+WVV ISILFSLPVSYPITIETLNYTPVA+GCL+IL++SYW
Sbjct: 442 VPGPFNLGRYGIIVGWVAVIWVVIISILFSLPVSYPITIETLNYTPVALGCLIILILSYW 501

Query: 421 IISGRRWFKGPV 432
           I+SGR WFKGP+
Sbjct: 502 ILSGRHWFKGPI 513


>Medtr3g096760.1 | amino acid permease | HC | chr3:44281053-44284896
           | 20130731
          Length = 528

 Score =  357 bits (916), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/434 (44%), Positives = 268/434 (61%), Gaps = 3/434 (0%)

Query: 2   LVALSMAEICSSYPTSGGLYYWSAKLAGPGWAPFASWITGWFNIVGQWAVTTSVDFSLAQ 61
            V ++MAEICSS+PT+G LY+W+A LAGP W PF+SW   W   VG  A   +  ++ +Q
Sbjct: 85  FVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETVGLIAGIGTQAYAGSQ 144

Query: 62  LIQVIILLSTGGKNGGGYEANKYVTIAFHAGLLVLHGIINSLPISWLSFLGQLAAIWNVL 121
            +Q IILLSTG   GGGY A K++ +  + GL V+   +N+  +  ++F+  ++  W V+
Sbjct: 145 TLQSIILLSTGTNKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIAFIDIISIWWQVI 204

Query: 122 GVFVLMIAIPSVATERASAKFVFTHFN-TDNGEGINSKPYIFLLGLLMSQYTLTGYDASA 180
           G  V++I +P VA  + SA +VFT+F    +  G++SKPY  +L  L+SQY+L GYDA+A
Sbjct: 205 GGAVIVILLPLVALTKQSATYVFTNFELASDTTGVSSKPYAVILSFLVSQYSLYGYDAAA 264

Query: 181 HMTEETKDADRNGPKXXXXXXXXXXXXXWGYILGITFAVTDIPYLLNENND-AGGYAIAE 239
           H+TEETK AD+NGP              W YIL +TF++ D  YL + NN+ AG +  A+
Sbjct: 265 HLTEETKGADKNGPIAILGSIGIISVFGWAYILALTFSIQDFGYLYDPNNETAGAFVPAQ 324

Query: 240 IFYMAFKRRYGHGIGGIICLAIVAVAIFFCGMSSVTSNSRMVYAFSRDGAMPLSSLWHKV 299
           I Y AF  RY +  G I+ L I+  + FF G+S  TS +R+VYA SRD  +P S LW K+
Sbjct: 325 ILYDAFHGRYHNSAGAIVLLFIIWGSFFFGGLSITTSAARVVYALSRDKGVPFSFLWRKL 384

Query: 300 N-KQEVPIYAVWLSVLISFCMALTSLGSMVAFQAMVSIATIGLYIAYALPIFFRVTLAQK 358
           + K +VP  AVWL   I   + L  L   V F A+ SIATIG    YA+PIF R+ + +K
Sbjct: 385 HPKHKVPTNAVWLCAAICILLGLPILKVNVVFTAITSIATIGWVGGYAVPIFARMVMPEK 444

Query: 359 RFVPGPFNLGRYGVIVGWIAVLWVVTISILFSLPVSYPITIETLNYTPVAVGCLLILVVS 418
            F PGPF LG+       IA LW+     +F LP  YPIT +T NY PVA+G  L L++ 
Sbjct: 445 NFKPGPFYLGKASRPTCLIAFLWICYTCSVFLLPTLYPITWDTFNYAPVALGVGLGLIML 504

Query: 419 YWIISGRRWFKGPV 432
           +W++  R+WFKGPV
Sbjct: 505 WWVLDARKWFKGPV 518


>Medtr3g096760.2 | amino acid permease | HC | chr3:44281053-44284896
           | 20130731
          Length = 528

 Score =  357 bits (916), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/434 (44%), Positives = 268/434 (61%), Gaps = 3/434 (0%)

Query: 2   LVALSMAEICSSYPTSGGLYYWSAKLAGPGWAPFASWITGWFNIVGQWAVTTSVDFSLAQ 61
            V ++MAEICSS+PT+G LY+W+A LAGP W PF+SW   W   VG  A   +  ++ +Q
Sbjct: 85  FVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETVGLIAGIGTQAYAGSQ 144

Query: 62  LIQVIILLSTGGKNGGGYEANKYVTIAFHAGLLVLHGIINSLPISWLSFLGQLAAIWNVL 121
            +Q IILLSTG   GGGY A K++ +  + GL V+   +N+  +  ++F+  ++  W V+
Sbjct: 145 TLQSIILLSTGTNKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIAFIDIISIWWQVI 204

Query: 122 GVFVLMIAIPSVATERASAKFVFTHFN-TDNGEGINSKPYIFLLGLLMSQYTLTGYDASA 180
           G  V++I +P VA  + SA +VFT+F    +  G++SKPY  +L  L+SQY+L GYDA+A
Sbjct: 205 GGAVIVILLPLVALTKQSATYVFTNFELASDTTGVSSKPYAVILSFLVSQYSLYGYDAAA 264

Query: 181 HMTEETKDADRNGPKXXXXXXXXXXXXXWGYILGITFAVTDIPYLLNENND-AGGYAIAE 239
           H+TEETK AD+NGP              W YIL +TF++ D  YL + NN+ AG +  A+
Sbjct: 265 HLTEETKGADKNGPIAILGSIGIISVFGWAYILALTFSIQDFGYLYDPNNETAGAFVPAQ 324

Query: 240 IFYMAFKRRYGHGIGGIICLAIVAVAIFFCGMSSVTSNSRMVYAFSRDGAMPLSSLWHKV 299
           I Y AF  RY +  G I+ L I+  + FF G+S  TS +R+VYA SRD  +P S LW K+
Sbjct: 325 ILYDAFHGRYHNSAGAIVLLFIIWGSFFFGGLSITTSAARVVYALSRDKGVPFSFLWRKL 384

Query: 300 N-KQEVPIYAVWLSVLISFCMALTSLGSMVAFQAMVSIATIGLYIAYALPIFFRVTLAQK 358
           + K +VP  AVWL   I   + L  L   V F A+ SIATIG    YA+PIF R+ + +K
Sbjct: 385 HPKHKVPTNAVWLCAAICILLGLPILKVNVVFTAITSIATIGWVGGYAVPIFARMVMPEK 444

Query: 359 RFVPGPFNLGRYGVIVGWIAVLWVVTISILFSLPVSYPITIETLNYTPVAVGCLLILVVS 418
            F PGPF LG+       IA LW+     +F LP  YPIT +T NY PVA+G  L L++ 
Sbjct: 445 NFKPGPFYLGKASRPTCLIAFLWICYTCSVFLLPTLYPITWDTFNYAPVALGVGLGLIML 504

Query: 419 YWIISGRRWFKGPV 432
           +W++  R+WFKGPV
Sbjct: 505 WWVLDARKWFKGPV 518