Miyakogusa Predicted Gene

Lj5g3v2169580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2169580.1 Non Characterized Hit- tr|I1HCP5|I1HCP5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,37.93,5e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.56840.1
         (196 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g109230.1 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   242   1e-64
Medtr6g081860.1 | 2OG-Fe(II) oxygenase family oxidoreductase | H...   179   1e-45
Medtr8g106610.1 | oxidoreductase, putative | HC | chr8:44991089-...   144   4e-35

>Medtr1g109230.1 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr1:49372635-49377988 | 20130731
          Length = 395

 Score =  242 bits (618), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 129/151 (85%)

Query: 30  LRASPKRDHKPDNYEDLQLDFNPLVLSSLERYLPLHMLNMSRDSKAQYMRNILLRYLPDT 89
           L  SP+ DH PDNYEDL LDFNPLV +SLER+LP H+LN+SRD KA YM NILLRYLP +
Sbjct: 48  LLGSPRGDHMPDNYEDLPLDFNPLVFTSLERHLPSHILNLSRDLKAHYMSNILLRYLPHS 107

Query: 90  ERVRIQKHKEYRQNIILNYPPLHKEIYTMHSENFFVPSFLQAIKENTKAGFRSVMAEPSR 149
           ERVR+QK KEYRQ IILNYPPLHKEIYTMHSE+FF PSFL+AIKENT+A FRS+MAEPSR
Sbjct: 108 ERVRMQKQKEYRQKIILNYPPLHKEIYTMHSEHFFAPSFLRAIKENTEASFRSIMAEPSR 167

Query: 150 GIYTFAMLQPQFCEMLVSEVSHIFPFVFKQK 180
           G+YTF MLQPQFCEMLVSEV H   +V + K
Sbjct: 168 GVYTFEMLQPQFCEMLVSEVDHFERWVHETK 198


>Medtr6g081860.1 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr6:30535649-30542562 | 20130731
          Length = 371

 Score =  179 bits (455), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 83/151 (54%), Positives = 115/151 (76%)

Query: 30  LRASPKRDHKPDNYEDLQLDFNPLVLSSLERYLPLHMLNMSRDSKAQYMRNILLRYLPDT 89
           LR +P +DHKP+ Y+DL+LDF+P + SSLE++LP +ML  SRD KA++MR ILL+YLP+ 
Sbjct: 24  LRLNPNKDHKPEGYDDLELDFSPSIFSSLEKHLPPNMLVFSRDDKAKFMREILLKYLPNG 83

Query: 90  ERVRIQKHKEYRQNIILNYPPLHKEIYTMHSENFFVPSFLQAIKENTKAGFRSVMAEPSR 149
           ER R QKHKEYRQ I  +Y PLH E+YT++   FFVP+FL+AI +NT+  FRS+++EPS 
Sbjct: 84  ERHRTQKHKEYRQKINSHYQPLHHELYTLNPTAFFVPTFLKAISDNTEQSFRSIISEPSP 143

Query: 150 GIYTFAMLQPQFCEMLVSEVSHIFPFVFKQK 180
            IY F M QP+FCE+L +E+ +   +V + K
Sbjct: 144 DIYVFQMFQPEFCELLQAEIENFEKWVAEAK 174


>Medtr8g106610.1 | oxidoreductase, putative | HC |
           chr8:44991089-44978927 | 20130731
          Length = 420

 Score =  144 bits (364), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 76/156 (48%), Positives = 101/156 (64%), Gaps = 1/156 (0%)

Query: 30  LRASPKRDHKPDNYEDLQLDFNPLVLSSL-ERYLPLHMLNMSRDSKAQYMRNILLRYLPD 88
           L  +P ++HKP+ YEDL LD +  +L S  E +LP  +L   RD KA YM+ IL  Y P 
Sbjct: 70  LMLNPVKNHKPEKYEDLGLDISSSLLFSSLEMHLPRTLLRAPRDQKASYMQEILHEYAPP 129

Query: 89  TERVRIQKHKEYRQNIILNYPPLHKEIYTMHSENFFVPSFLQAIKENTKAGFRSVMAEPS 148
               R Q  KEYR+ I+ +Y PLH+E+YTM    FFVP+FL+AI +NT+  FRS+M+EP 
Sbjct: 130 ALIYRDQLQKEYREKIMSSYQPLHQELYTMDPAAFFVPTFLEAINDNTEQSFRSIMSEPV 189

Query: 149 RGIYTFAMLQPQFCEMLVSEVSHIFPFVFKQKSLYM 184
            GI+TF MLQP FCE+L+SE  H   + +K K   M
Sbjct: 190 PGIFTFEMLQPHFCELLISEAEHFEKWAYKAKLCVM 225