Miyakogusa Predicted Gene
- Lj5g3v2169560.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2169560.2 Non Characterized Hit- tr|B9SJY8|B9SJY8_RICCO
ATP-dependent RNA helicase, putative OS=Ricinus
commun,72.74,0,SUBFAMILY NOT NAMED,NULL; ATP-DEPENDENT RNA
HELICASE,NULL; no description,NULL; seg,NULL; P-loop con,CUFF.56833.2
(691 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein ... 1022 0.0
Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein ... 1021 0.0
Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein ... 793 0.0
Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein ... 793 0.0
Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein ... 793 0.0
Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein ... 793 0.0
Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein ... 793 0.0
Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein ... 723 0.0
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 436 e-122
Medtr4g134790.2 | ATP-dependent RNA helicase | HC | chr4:5652988... 328 1e-89
Medtr4g134790.1 | ATP-dependent RNA helicase | HC | chr4:5652988... 328 2e-89
Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC... 220 4e-57
Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC | ch... 218 1e-56
Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC | ch... 218 2e-56
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 209 1e-53
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 194 2e-49
Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC | chr2:4... 189 6e-48
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c... 177 4e-44
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 174 3e-43
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 174 3e-43
Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA hel... 174 4e-43
Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 173 4e-43
Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA hel... 173 5e-43
Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c... 172 1e-42
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 170 4e-42
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 170 4e-42
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 170 4e-42
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 165 1e-40
Medtr0267s0070.1 | NB-ARC domain disease resistance protein, put... 164 3e-40
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 163 7e-40
Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 163 7e-40
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 162 8e-40
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 160 3e-39
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 159 7e-39
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 159 1e-38
Medtr1g088590.1 | zinc finger CCCH domain protein | HC | chr1:39... 144 4e-34
Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC | chr7:3... 133 6e-31
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 132 1e-30
Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,... 129 1e-29
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 124 3e-28
Medtr4g120070.1 | RNA helicase, putative | HC | chr4:49772806-49... 70 5e-12
Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein |... 68 3e-11
Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA he... 62 2e-09
>Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360401 | 20130731
Length = 1222
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/682 (75%), Positives = 562/682 (82%), Gaps = 18/682 (2%)
Query: 12 NLSSHLPFLPMKDRP----YGAVYVPPHHRLRSVVTSANHHSAAAAPVSPKLTQNPTPLK 67
NLS H L MKDRP +GA+YVPPHHRLRSVVTSA + AP+S KL+QN P
Sbjct: 60 NLSFH--HLAMKDRPSLSSHGAIYVPPHHRLRSVVTSA-----SPAPISVKLSQNQPPPP 112
Query: 68 TPFLEQ-APNNTNSRFVSAYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSML 126
T + NN NSRFVSAYDDV+S+DC + + +P SLPS + NDN+ EWKRKL ML
Sbjct: 113 TTLQTPLSNNNANSRFVSAYDDVISEDCSNHQLHVP---SLPSGYLNDNMNEWKRKLMML 169
Query: 127 LNDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXX 186
LNDKSKQEVISREKKDR DF+ IAVLAT MGLYSHKY+KVVVFSK P
Sbjct: 170 LNDKSKQEVISREKKDRRDFDDIAVLATRMGLYSHKYSKVVVFSKAPLPNYRYDLDERRP 229
Query: 187 XXEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLA 246
EVSMP+T+ ++V A+FEEYL QKSRV K +GTDEG F QP LA
Sbjct: 230 QREVSMPLTVSKRVGAYFEEYLSQKSRVKKSFSDSSFARSSSDGSLGTDEGFFVQPEPLA 289
Query: 247 SSKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVI 306
SSK+V EK+ + S QMR+QQ AWQESPEGR++LEFRS+LPAYKEKEAILS++S+NQVVI
Sbjct: 290 SSKSVVEKIARQISFQMRDQQQAWQESPEGRKMLEFRSNLPAYKEKEAILSVISKNQVVI 349
Query: 307 ISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGES 366
ISGETGCGKTTQIPQFILESEIE+V GAACNIICTQPRRISAMSVSERVA ERGEKLGES
Sbjct: 350 ISGETGCGKTTQIPQFILESEIESVHGAACNIICTQPRRISAMSVSERVAFERGEKLGES 409
Query: 367 VGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXX 426
VGYKVRLEG+KG+DTH+LFCTTGILLRRLLADRNL+GVTHVIVDEIHERGMNEDF
Sbjct: 410 VGYKVRLEGMKGKDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFLLIVL 469
Query: 427 XXXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLT 486
HRPELKLILMSATLDAELFS YFNGAPI+NI GFT+PVRT FLENILE+TGYRLT
Sbjct: 470 KELLPHRPELKLILMSATLDAELFSLYFNGAPIVNILGFTHPVRTLFLENILEITGYRLT 529
Query: 487 PYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCI 546
P NQIDDYGQER WKMNKQAPRKRKSQIAS VEDAIR+ADF++YS QTQESLSCWNPDCI
Sbjct: 530 PSNQIDDYGQERAWKMNKQAPRKRKSQIASAVEDAIRSADFREYSLQTQESLSCWNPDCI 589
Query: 547 GFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMA 606
GFSLIEYILC+ICEN+RPGAVLVFMTGWDDISSLKEKL + VLGDP RVLLL CHGSMA
Sbjct: 590 GFSLIEYILCDICENKRPGAVLVFMTGWDDISSLKEKLQTHYVLGDPKRVLLLTCHGSMA 649
Query: 607 SSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPT 666
SSEQ+LIFEEPEDGVRK+VLATNIAETSIT++DVVFVLDCGKAKETSYDALNNTPCLLPT
Sbjct: 650 SSEQKLIFEEPEDGVRKVVLATNIAETSITVDDVVFVLDCGKAKETSYDALNNTPCLLPT 709
Query: 667 WISKVSAQQRKSWSRSTGRVLP 688
WISK SA QR+ GRV P
Sbjct: 710 WISKASAHQRRG---RAGRVQP 728
>Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360105 | 20130731
Length = 1248
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/683 (74%), Positives = 562/683 (82%), Gaps = 18/683 (2%)
Query: 12 NLSSHLPFLPMKDRP----YGAVYVPPHHRLRSVVTSANHHSAAAAPVSPKLTQNPTPLK 67
NLS H L MKDRP +GA+YVPPHHRLRSVVTSA + AP+S KL+QN P
Sbjct: 60 NLSFH--HLAMKDRPSLSSHGAIYVPPHHRLRSVVTSA-----SPAPISVKLSQNQPPPP 112
Query: 68 TPFLEQ-APNNTNSRFVSAYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSML 126
T + NN NSRFVSAYDDV+S+DC + + +P SLPS + NDN+ EWKRKL ML
Sbjct: 113 TTLQTPLSNNNANSRFVSAYDDVISEDCSNHQLHVP---SLPSGYLNDNMNEWKRKLMML 169
Query: 127 LNDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXX 186
LNDKSKQEVISREKKDR DF+ IAVLAT MGLYSHKY+KVVVFSK P
Sbjct: 170 LNDKSKQEVISREKKDRRDFDDIAVLATRMGLYSHKYSKVVVFSKAPLPNYRYDLDERRP 229
Query: 187 XXEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLA 246
EVSMP+T+ ++V A+FEEYL QKSRV K +GTDEG F QP LA
Sbjct: 230 QREVSMPLTVSKRVGAYFEEYLSQKSRVKKSFSDSSFARSSSDGSLGTDEGFFVQPEPLA 289
Query: 247 SSKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVI 306
SSK+V EK+ + S QMR+QQ AWQESPEGR++LEFRS+LPAYKEKEAILS++S+NQVVI
Sbjct: 290 SSKSVVEKIARQISFQMRDQQQAWQESPEGRKMLEFRSNLPAYKEKEAILSVISKNQVVI 349
Query: 307 ISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGES 366
ISGETGCGKTTQIPQFILESEIE+V GAACNIICTQPRRISAMSVSERVA ERGEKLGES
Sbjct: 350 ISGETGCGKTTQIPQFILESEIESVHGAACNIICTQPRRISAMSVSERVAFERGEKLGES 409
Query: 367 VGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXX 426
VGYKVRLEG+KG+DTH+LFCTTGILLRRLLADRNL+GVTHVIVDEIHERGMNEDF
Sbjct: 410 VGYKVRLEGMKGKDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFLLIVL 469
Query: 427 XXXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLT 486
HRPELKLILMSATLDAELFS YFNGAPI+NI GFT+PVRT FLENILE+TGYRLT
Sbjct: 470 KELLPHRPELKLILMSATLDAELFSLYFNGAPIVNILGFTHPVRTLFLENILEITGYRLT 529
Query: 487 PYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCI 546
P NQIDDYGQER WKMNKQAPRKRKSQIAS VEDAIR+ADF++YS QTQESLSCWNPDCI
Sbjct: 530 PSNQIDDYGQERAWKMNKQAPRKRKSQIASAVEDAIRSADFREYSLQTQESLSCWNPDCI 589
Query: 547 GFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMA 606
GFSLIEYILC+ICEN+RPGAVLVFMTGWDDISSLKEKL + VLGDP RVLLL CHGSMA
Sbjct: 590 GFSLIEYILCDICENKRPGAVLVFMTGWDDISSLKEKLQTHYVLGDPKRVLLLTCHGSMA 649
Query: 607 SSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPT 666
SSEQ+LIFEEPEDGVRK+VLATNIAETSIT++DVVFVLDCGKAKETSYDALNNTPCLLPT
Sbjct: 650 SSEQKLIFEEPEDGVRKVVLATNIAETSITVDDVVFVLDCGKAKETSYDALNNTPCLLPT 709
Query: 667 WISKVSAQQRKSWSRSTGRVLPS 689
WISK SA QR+ GRV P
Sbjct: 710 WISKASAHQRRG---RAGRVQPG 729
>Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/621 (63%), Positives = 472/621 (76%), Gaps = 10/621 (1%)
Query: 69 PFLEQAPNNTNSRFVSAYDDVVSDDCFDREFQIPLPSSLP-SDFPNDNIAEWKRKLSMLL 127
PF Q +T RF A+ DV SD+ D EF P D +NI W+ KL+MLL
Sbjct: 59 PFFHQQ-TSTYGRF--AFKDVSSDES-DLEFASSRPQQQQLGDSTLENIDSWRWKLTMLL 114
Query: 128 NDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXX 187
+K +QEV+S EKKDR DF Q+ LAT MGLYS +Y +VVVFSK P
Sbjct: 115 RNKDQQEVVSNEKKDRRDFLQLETLATRMGLYSRQYARVVVFSKAPLPNYRPDLDDKRPL 174
Query: 188 XEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLAS 247
EV++P + R+VD H +L K+ + DEG++ P ++
Sbjct: 175 REVTLPFGVHREVDTHLLAHLSHKATKRVGSFDDSLHRSRDDGSIPADEGIYGHPEPMSH 234
Query: 248 SKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVII 307
+ EK+L RRSLQ+ +QQ WQESPEG+++LEFR SLPA+KEK+A L ++S NQV+++
Sbjct: 235 NSVAKEKILQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVV 294
Query: 308 SGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESV 367
SGETGCGKTTQ+PQ+ILESEIEA RG+ CNIICTQPRRISA+SVSERVA+ERGEKLGESV
Sbjct: 295 SGETGCGKTTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESV 354
Query: 368 GYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXX 427
GYKVRLEG++GRDT +LFCTTG+LLRRLL DR+L+GVTHVIVDEIHERGMNEDF
Sbjct: 355 GYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLK 414
Query: 428 XXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTP 487
RP+L+LILMSATL+AELFSSYF+GAP ++IPGFT+PVR FLE+ILE TGYRLTP
Sbjct: 415 DLLPRRPDLRLILMSATLNAELFSSYFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTP 474
Query: 488 YNQIDDYGQERMWKMNKQAP--RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDC 545
YNQIDDYGQE+ WKM KQA +KRKSQIAS VEDA+ ADFK YS +T+ES+SCWNPD
Sbjct: 475 YNQIDDYGQEKTWKMQKQAQSFKKRKSQIASAVEDALEVADFKGYSLRTKESMSCWNPDS 534
Query: 546 IGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSM 605
IGF+LIE++LC+I +NERPGA LVFMTGWDDI+SLK+KL + +LGD +RVLLLACHGSM
Sbjct: 535 IGFNLIEHVLCHIVKNERPGAALVFMTGWDDINSLKDKLHAHPLLGDQSRVLLLACHGSM 594
Query: 606 ASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLP 665
+SSEQ+LIFE P GVRKIVLATN+AETSITINDVVFV+DCGKAKETSYDALNNTPCLLP
Sbjct: 595 SSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLP 654
Query: 666 TWISKVSAQQRKSWSRSTGRV 686
+WISK +A+QRK GRV
Sbjct: 655 SWISKAAARQRKG---RAGRV 672
>Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/621 (63%), Positives = 472/621 (76%), Gaps = 10/621 (1%)
Query: 69 PFLEQAPNNTNSRFVSAYDDVVSDDCFDREFQIPLPSSLP-SDFPNDNIAEWKRKLSMLL 127
PF Q +T RF A+ DV SD+ D EF P D +NI W+ KL+MLL
Sbjct: 59 PFFHQQ-TSTYGRF--AFKDVSSDES-DLEFASSRPQQQQLGDSTLENIDSWRWKLTMLL 114
Query: 128 NDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXX 187
+K +QEV+S EKKDR DF Q+ LAT MGLYS +Y +VVVFSK P
Sbjct: 115 RNKDQQEVVSNEKKDRRDFLQLETLATRMGLYSRQYARVVVFSKAPLPNYRPDLDDKRPL 174
Query: 188 XEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLAS 247
EV++P + R+VD H +L K+ + DEG++ P ++
Sbjct: 175 REVTLPFGVHREVDTHLLAHLSHKATKRVGSFDDSLHRSRDDGSIPADEGIYGHPEPMSH 234
Query: 248 SKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVII 307
+ EK+L RRSLQ+ +QQ WQESPEG+++LEFR SLPA+KEK+A L ++S NQV+++
Sbjct: 235 NSVAKEKILQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVV 294
Query: 308 SGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESV 367
SGETGCGKTTQ+PQ+ILESEIEA RG+ CNIICTQPRRISA+SVSERVA+ERGEKLGESV
Sbjct: 295 SGETGCGKTTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESV 354
Query: 368 GYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXX 427
GYKVRLEG++GRDT +LFCTTG+LLRRLL DR+L+GVTHVIVDEIHERGMNEDF
Sbjct: 355 GYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLK 414
Query: 428 XXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTP 487
RP+L+LILMSATL+AELFSSYF+GAP ++IPGFT+PVR FLE+ILE TGYRLTP
Sbjct: 415 DLLPRRPDLRLILMSATLNAELFSSYFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTP 474
Query: 488 YNQIDDYGQERMWKMNKQAP--RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDC 545
YNQIDDYGQE+ WKM KQA +KRKSQIAS VEDA+ ADFK YS +T+ES+SCWNPD
Sbjct: 475 YNQIDDYGQEKTWKMQKQAQSFKKRKSQIASAVEDALEVADFKGYSLRTKESMSCWNPDS 534
Query: 546 IGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSM 605
IGF+LIE++LC+I +NERPGA LVFMTGWDDI+SLK+KL + +LGD +RVLLLACHGSM
Sbjct: 535 IGFNLIEHVLCHIVKNERPGAALVFMTGWDDINSLKDKLHAHPLLGDQSRVLLLACHGSM 594
Query: 606 ASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLP 665
+SSEQ+LIFE P GVRKIVLATN+AETSITINDVVFV+DCGKAKETSYDALNNTPCLLP
Sbjct: 595 SSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLP 654
Query: 666 TWISKVSAQQRKSWSRSTGRV 686
+WISK +A+QRK GRV
Sbjct: 655 SWISKAAARQRKG---RAGRV 672
>Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/621 (63%), Positives = 472/621 (76%), Gaps = 10/621 (1%)
Query: 69 PFLEQAPNNTNSRFVSAYDDVVSDDCFDREFQIPLPSSLP-SDFPNDNIAEWKRKLSMLL 127
PF Q +T RF A+ DV SD+ D EF P D +NI W+ KL+MLL
Sbjct: 59 PFFHQQ-TSTYGRF--AFKDVSSDES-DLEFASSRPQQQQLGDSTLENIDSWRWKLTMLL 114
Query: 128 NDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXX 187
+K +QEV+S EKKDR DF Q+ LAT MGLYS +Y +VVVFSK P
Sbjct: 115 RNKDQQEVVSNEKKDRRDFLQLETLATRMGLYSRQYARVVVFSKAPLPNYRPDLDDKRPL 174
Query: 188 XEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLAS 247
EV++P + R+VD H +L K+ + DEG++ P ++
Sbjct: 175 REVTLPFGVHREVDTHLLAHLSHKATKRVGSFDDSLHRSRDDGSIPADEGIYGHPEPMSH 234
Query: 248 SKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVII 307
+ EK+L RRSLQ+ +QQ WQESPEG+++LEFR SLPA+KEK+A L ++S NQV+++
Sbjct: 235 NSVAKEKILQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVV 294
Query: 308 SGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESV 367
SGETGCGKTTQ+PQ+ILESEIEA RG+ CNIICTQPRRISA+SVSERVA+ERGEKLGESV
Sbjct: 295 SGETGCGKTTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESV 354
Query: 368 GYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXX 427
GYKVRLEG++GRDT +LFCTTG+LLRRLL DR+L+GVTHVIVDEIHERGMNEDF
Sbjct: 355 GYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLK 414
Query: 428 XXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTP 487
RP+L+LILMSATL+AELFSSYF+GAP ++IPGFT+PVR FLE+ILE TGYRLTP
Sbjct: 415 DLLPRRPDLRLILMSATLNAELFSSYFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTP 474
Query: 488 YNQIDDYGQERMWKMNKQAP--RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDC 545
YNQIDDYGQE+ WKM KQA +KRKSQIAS VEDA+ ADFK YS +T+ES+SCWNPD
Sbjct: 475 YNQIDDYGQEKTWKMQKQAQSFKKRKSQIASAVEDALEVADFKGYSLRTKESMSCWNPDS 534
Query: 546 IGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSM 605
IGF+LIE++LC+I +NERPGA LVFMTGWDDI+SLK+KL + +LGD +RVLLLACHGSM
Sbjct: 535 IGFNLIEHVLCHIVKNERPGAALVFMTGWDDINSLKDKLHAHPLLGDQSRVLLLACHGSM 594
Query: 606 ASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLP 665
+SSEQ+LIFE P GVRKIVLATN+AETSITINDVVFV+DCGKAKETSYDALNNTPCLLP
Sbjct: 595 SSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLP 654
Query: 666 TWISKVSAQQRKSWSRSTGRV 686
+WISK +A+QRK GRV
Sbjct: 655 SWISKAAARQRKG---RAGRV 672
>Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/621 (63%), Positives = 472/621 (76%), Gaps = 10/621 (1%)
Query: 69 PFLEQAPNNTNSRFVSAYDDVVSDDCFDREFQIPLPSSLP-SDFPNDNIAEWKRKLSMLL 127
PF Q +T RF A+ DV SD+ D EF P D +NI W+ KL+MLL
Sbjct: 59 PFFHQQ-TSTYGRF--AFKDVSSDES-DLEFASSRPQQQQLGDSTLENIDSWRWKLTMLL 114
Query: 128 NDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXX 187
+K +QEV+S EKKDR DF Q+ LAT MGLYS +Y +VVVFSK P
Sbjct: 115 RNKDQQEVVSNEKKDRRDFLQLETLATRMGLYSRQYARVVVFSKAPLPNYRPDLDDKRPL 174
Query: 188 XEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLAS 247
EV++P + R+VD H +L K+ + DEG++ P ++
Sbjct: 175 REVTLPFGVHREVDTHLLAHLSHKATKRVGSFDDSLHRSRDDGSIPADEGIYGHPEPMSH 234
Query: 248 SKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVII 307
+ EK+L RRSLQ+ +QQ WQESPEG+++LEFR SLPA+KEK+A L ++S NQV+++
Sbjct: 235 NSVAKEKILQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVV 294
Query: 308 SGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESV 367
SGETGCGKTTQ+PQ+ILESEIEA RG+ CNIICTQPRRISA+SVSERVA+ERGEKLGESV
Sbjct: 295 SGETGCGKTTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESV 354
Query: 368 GYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXX 427
GYKVRLEG++GRDT +LFCTTG+LLRRLL DR+L+GVTHVIVDEIHERGMNEDF
Sbjct: 355 GYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLK 414
Query: 428 XXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTP 487
RP+L+LILMSATL+AELFSSYF+GAP ++IPGFT+PVR FLE+ILE TGYRLTP
Sbjct: 415 DLLPRRPDLRLILMSATLNAELFSSYFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTP 474
Query: 488 YNQIDDYGQERMWKMNKQAP--RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDC 545
YNQIDDYGQE+ WKM KQA +KRKSQIAS VEDA+ ADFK YS +T+ES+SCWNPD
Sbjct: 475 YNQIDDYGQEKTWKMQKQAQSFKKRKSQIASAVEDALEVADFKGYSLRTKESMSCWNPDS 534
Query: 546 IGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSM 605
IGF+LIE++LC+I +NERPGA LVFMTGWDDI+SLK+KL + +LGD +RVLLLACHGSM
Sbjct: 535 IGFNLIEHVLCHIVKNERPGAALVFMTGWDDINSLKDKLHAHPLLGDQSRVLLLACHGSM 594
Query: 606 ASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLP 665
+SSEQ+LIFE P GVRKIVLATN+AETSITINDVVFV+DCGKAKETSYDALNNTPCLLP
Sbjct: 595 SSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLP 654
Query: 666 TWISKVSAQQRKSWSRSTGRV 686
+WISK +A+QRK GRV
Sbjct: 655 SWISKAAARQRKG---RAGRV 672
>Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/621 (63%), Positives = 472/621 (76%), Gaps = 10/621 (1%)
Query: 69 PFLEQAPNNTNSRFVSAYDDVVSDDCFDREFQIPLPSSLP-SDFPNDNIAEWKRKLSMLL 127
PF Q +T RF A+ DV SD+ D EF P D +NI W+ KL+MLL
Sbjct: 59 PFFHQQ-TSTYGRF--AFKDVSSDES-DLEFASSRPQQQQLGDSTLENIDSWRWKLTMLL 114
Query: 128 NDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXX 187
+K +QEV+S EKKDR DF Q+ LAT MGLYS +Y +VVVFSK P
Sbjct: 115 RNKDQQEVVSNEKKDRRDFLQLETLATRMGLYSRQYARVVVFSKAPLPNYRPDLDDKRPL 174
Query: 188 XEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLAS 247
EV++P + R+VD H +L K+ + DEG++ P ++
Sbjct: 175 REVTLPFGVHREVDTHLLAHLSHKATKRVGSFDDSLHRSRDDGSIPADEGIYGHPEPMSH 234
Query: 248 SKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVII 307
+ EK+L RRSLQ+ +QQ WQESPEG+++LEFR SLPA+KEK+A L ++S NQV+++
Sbjct: 235 NSVAKEKILQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVV 294
Query: 308 SGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESV 367
SGETGCGKTTQ+PQ+ILESEIEA RG+ CNIICTQPRRISA+SVSERVA+ERGEKLGESV
Sbjct: 295 SGETGCGKTTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESV 354
Query: 368 GYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXX 427
GYKVRLEG++GRDT +LFCTTG+LLRRLL DR+L+GVTHVIVDEIHERGMNEDF
Sbjct: 355 GYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLK 414
Query: 428 XXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTP 487
RP+L+LILMSATL+AELFSSYF+GAP ++IPGFT+PVR FLE+ILE TGYRLTP
Sbjct: 415 DLLPRRPDLRLILMSATLNAELFSSYFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTP 474
Query: 488 YNQIDDYGQERMWKMNKQAP--RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDC 545
YNQIDDYGQE+ WKM KQA +KRKSQIAS VEDA+ ADFK YS +T+ES+SCWNPD
Sbjct: 475 YNQIDDYGQEKTWKMQKQAQSFKKRKSQIASAVEDALEVADFKGYSLRTKESMSCWNPDS 534
Query: 546 IGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSM 605
IGF+LIE++LC+I +NERPGA LVFMTGWDDI+SLK+KL + +LGD +RVLLLACHGSM
Sbjct: 535 IGFNLIEHVLCHIVKNERPGAALVFMTGWDDINSLKDKLHAHPLLGDQSRVLLLACHGSM 594
Query: 606 ASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLP 665
+SSEQ+LIFE P GVRKIVLATN+AETSITINDVVFV+DCGKAKETSYDALNNTPCLLP
Sbjct: 595 SSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLP 654
Query: 666 TWISKVSAQQRKSWSRSTGRV 686
+WISK +A+QRK GRV
Sbjct: 655 SWISKAAARQRKG---RAGRV 672
>Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:16995201-16976389 | 20130731
Length = 1148
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/602 (59%), Positives = 459/602 (76%), Gaps = 21/602 (3%)
Query: 79 NSRFVSAYDDV--VSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVI 136
++RF S Y +V SDD ++ +F+ SS + N+ EWK KLSMLL ++ QE++
Sbjct: 48 STRFFSGYYNVEQFSDDEYECDFENHQASSTVA-----NVDEWKWKLSMLLRNEKDQEIV 102
Query: 137 SREKKDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITL 196
SR+K+DR D+EQIA LA MGLYS + KVVV SKVP EV +P++L
Sbjct: 103 SRDKRDRRDYEQIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSL 162
Query: 197 FRQVDAHFEEYLR--QKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASS---KAV 251
R+V+ +EYL Q + + DE A+S ++V
Sbjct: 163 QRRVEGLVQEYLDRLQLNSAKTTDSLDNLNSTNQIRDIDMDEN--------ANSFVDESV 214
Query: 252 AEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGET 311
EKVL +RSL+MRN Q +WQESPEG+++LEFR SLPA++EKE +L ++RNQV++ISGET
Sbjct: 215 MEKVLQKRSLRMRNMQRSWQESPEGKKMLEFRKSLPAFREKEGLLQAIARNQVIVISGET 274
Query: 312 GCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKV 371
GCGKTTQ+PQ+ILESEIE+ RGA C+IICTQPRRISAM+VSERV++ERGE LGE+VG+KV
Sbjct: 275 GCGKTTQLPQYILESEIESGRGAFCSIICTQPRRISAMAVSERVSAERGESLGETVGFKV 334
Query: 372 RLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXX 431
RLEG++G++TH+LFCT+GILLRRLL+DRNL G+THV VDEIHERGMNEDF
Sbjct: 335 RLEGMRGKNTHLLFCTSGILLRRLLSDRNLSGITHVFVDEIHERGMNEDFLLIVLKDLLP 394
Query: 432 HRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQI 491
R +L+L+LMSATL+AELFS+YF GAP +IPGFTYPVR +FLE++LEMTGY++T +NQ+
Sbjct: 395 RRRDLRLVLMSATLNAELFSNYFGGAPTFHIPGFTYPVRAHFLEDVLEMTGYKVTSFNQV 454
Query: 492 DDYGQERMWKMNKQ-APRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSL 550
DDYGQ+++WK KQ APRKRK+QI + VED++ + F++YSP+T++SLS W PDCIGF+L
Sbjct: 455 DDYGQDKLWKTQKQLAPRKRKNQITALVEDSLSKSSFENYSPKTRDSLSSWAPDCIGFNL 514
Query: 551 IEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQ 610
IE +LC+IC ERPGAVLVFMTGW+DIS L+++L + +LGDPNRVLL CHGSMA+SEQ
Sbjct: 515 IEAVLCHICRKERPGAVLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLQTCHGSMATSEQ 574
Query: 611 RLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISK 670
+LIF++P VRKIVLATN+AE SITINDVVFV+DCGKAKET+YDALNNTPCLLP+WIS+
Sbjct: 575 KLIFDKPPPNVRKIVLATNMAEASITINDVVFVIDCGKAKETTYDALNNTPCLLPSWISQ 634
Query: 671 VS 672
S
Sbjct: 635 AS 636
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/560 (43%), Positives = 337/560 (60%), Gaps = 18/560 (3%)
Query: 118 EWKRKLSMLLNDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTK--VVVFSKVPX- 174
EW +K+ + +QE++ + D + +A +A + LY H Y K +V SKVP
Sbjct: 67 EWWKKIETM-KRGGEQELVIKHYFSIADQQTLADMAYQHELYFHAYNKGKTLVVSKVPLP 125
Query: 175 -XXXXXXXXXXXXXXEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVG 233
E+ M + R+V L ++ G
Sbjct: 126 DYRADLDERHGSTQKEIKMSTDIERRVG----NLLNNSQSTSQSTATAAASLPSASTDTG 181
Query: 234 TDEGLFEQPVLLASSKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKE 293
+ + + ++S + + S+ ++ +Q Q S + + FR LPA+K K
Sbjct: 182 HKKTM---TTINSASSQQTDTSKEKLSVALKERQELEQASGSLKEMKSFREKLPAFKMKS 238
Query: 294 AILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSE 353
L + NQV+++SGETGCGKTTQ+PQFILE EI +RGA CNIICTQPRR+SA+SV+
Sbjct: 239 EFLKAVQGNQVLVVSGETGCGKTTQLPQFILEEEISCLRGADCNIICTQPRRVSAISVAA 298
Query: 354 RVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIH 413
R+++ERGE LG++VGY +RLE + +T +LFCTTG+LLR+L+ D L GV+H++VDEIH
Sbjct: 299 RISAERGETLGKTVGYHIRLEAKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIH 358
Query: 414 ERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYF 473
ERGMNEDF RP+L+LILMSAT++A+LFS YF AP M+IPGFT+PV +F
Sbjct: 359 ERGMNEDFLIIILRDLLPRRPDLRLILMSATINADLFSKYFANAPTMHIPGFTFPVVEHF 418
Query: 474 LENILEMTGYRLTPYNQIDDY-GQERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSP 532
LE++LE T Y + ++ DD G R K + + +K +A ED +K YS
Sbjct: 419 LEDVLEKTRYSIK--SESDDIEGNSRRRKKQQDS---KKDPLAEMFEDVDIDTHYKSYSS 473
Query: 533 QTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGD 592
++SL W+ I L+E + IC NE GA+LVF+TGWD+IS L E+L +N +LG+
Sbjct: 474 GVRKSLEAWSGSQIDLGLVEATIEYICRNEGGGAILVFLTGWDEISKLFEELEKNYLLGN 533
Query: 593 PNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKET 652
++ L+L HGSM + +Q IF+ P RKIVLATNIAE+SITI+DVV+V+DCGKAKET
Sbjct: 534 RSKFLILPIHGSMPTIDQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVIDCGKAKET 593
Query: 653 SYDALNNTPCLLPTWISKVS 672
SYDALN LLP+WISK S
Sbjct: 594 SYDALNKLASLLPSWISKAS 613
>Medtr4g134790.2 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1449
Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/458 (40%), Positives = 274/458 (59%), Gaps = 35/458 (7%)
Query: 260 SLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQI 319
S +R Q+ S + +L FR++LP K IL +L N V+++ GETG GKTTQ+
Sbjct: 579 STNLRQGQYIKMGSQRYQDMLNFRATLPIATLKGDILQMLKENDVLVVCGETGSGKTTQV 638
Query: 320 PQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGE----KLGESVGYKVRLEG 375
PQFIL+ IE+ G CNIICTQPRRI+A+SV+ERVA ER E G +GY+VRL+
Sbjct: 639 PQFILDEMIESGHGGHCNIICTQPRRIAAISVAERVADERCEPSPGSDGSLIGYQVRLDS 698
Query: 376 VKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDF-----XXXXXXXXX 430
+ T +LFCTTGILLR+L+ +R+L G+TH+IVDE+HER + DF
Sbjct: 699 ARNEKTRLLFCTTGILLRKLMGNRSLTGITHIIVDEVHERSLLGDFILIVLKNLIEKQSS 758
Query: 431 XHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRL---TP 487
++K+ILMSAT+D+ FSSYF P++ G T+PV TYFLE++ + YRL +P
Sbjct: 759 ESSSKVKVILMSATVDSGSFSSYFGHCPVVTAEGRTHPVTTYFLEDVYDQIKYRLASDSP 818
Query: 488 YNQIDDYGQERMWKMNKQAP----RKRKSQIASTVEDAIRAAD-----------FKDYSP 532
+ ++ + ++AP R +K+ + S D ++ ++ YS
Sbjct: 819 ASLTNE-----TFPKGQRAPVTNSRGKKNLVLSAWGDESVLSEEHVNPYFVPSYYQSYSE 873
Query: 533 QTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGD 592
Q Q++L N D I + LIE ++C I E+ GA+LVF+ G +I+ L +KL + G
Sbjct: 874 QAQKNLKRVNEDVIDYDLIEDLICYIDESCGEGAILVFLPGVFEINHLHDKLTASYQFGG 933
Query: 593 PNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKET 652
P+ ++ H S+AS+EQ+ +F P +RK+V+ATNIAETSITI+DV++V+DCGK KE
Sbjct: 934 PSSDWVIPLHSSVASTEQKKVFLRPPGNIRKVVIATNIAETSITIDDVIYVIDCGKHKEN 993
Query: 653 SYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPSL 690
Y+ ++ WIS+ +A+QR+ GRV P +
Sbjct: 994 RYNPQKKLSSMVEDWISQANARQRQG---RAGRVKPGI 1028
>Medtr4g134790.1 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1452
Score = 328 bits (840), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/457 (40%), Positives = 270/457 (59%), Gaps = 30/457 (6%)
Query: 260 SLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQI 319
S +R Q+ S + +L FR++LP K IL +L N V+++ GETG GKTTQ+
Sbjct: 579 STNLRQGQYIKMGSQRYQDMLNFRATLPIATLKGDILQMLKENDVLVVCGETGSGKTTQV 638
Query: 320 PQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGE----KLGESVGYKVRLEG 375
PQFIL+ IE+ G CNIICTQPRRI+A+SV+ERVA ER E G +GY+VRL+
Sbjct: 639 PQFILDEMIESGHGGHCNIICTQPRRIAAISVAERVADERCEPSPGSDGSLIGYQVRLDS 698
Query: 376 VKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDF-----XXXXXXXXX 430
+ T +LFCTTGILLR+L+ +R+L G+TH+IVDE+HER + DF
Sbjct: 699 ARNEKTRLLFCTTGILLRKLMGNRSLTGITHIIVDEVHERSLLGDFILIVLKNLIEKQSS 758
Query: 431 XHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTP--- 487
++K+ILMSAT+D+ FSSYF P++ G T+PV TYFLE++ + YRL
Sbjct: 759 ESSSKVKVILMSATVDSGSFSSYFGHCPVVTAEGRTHPVTTYFLEDVYDQIKYRLASDSP 818
Query: 488 ---YNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAIRAAD-----------FKDYSPQ 533
N+ GQ + + R +K+ + S D ++ ++ YS Q
Sbjct: 819 ASLTNETFPKGQ-NLQRAPVTNSRGKKNLVLSAWGDESVLSEEHVNPYFVPSYYQSYSEQ 877
Query: 534 TQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDP 593
Q++L N D I + LIE ++C I E+ GA+LVF+ G +I+ L +KL + G P
Sbjct: 878 AQKNLKRVNEDVIDYDLIEDLICYIDESCGEGAILVFLPGVFEINHLHDKLTASYQFGGP 937
Query: 594 NRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETS 653
+ ++ H S+AS+EQ+ +F P +RK+V+ATNIAETSITI+DV++V+DCGK KE
Sbjct: 938 SSDWVIPLHSSVASTEQKKVFLRPPGNIRKVVIATNIAETSITIDDVIYVIDCGKHKENR 997
Query: 654 YDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPSL 690
Y+ ++ WIS+ +A+QR+ GRV P +
Sbjct: 998 YNPQKKLSSMVEDWISQANARQRQG---RAGRVKPGI 1031
>Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC |
chr8:17594404-17602720 | 20130731
Length = 630
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 518 VEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDI 577
+E A+ + F +YSP T+ SL W P CIGF LIE +LC+IC ERPGAVLVFMTGW DI
Sbjct: 69 LEGALSKSTFANYSPNTRSSLYNWKPHCIGFKLIEAVLCHICRKERPGAVLVFMTGWKDI 128
Query: 578 SSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITI 637
S L++ L +++LGD VL+ CHG M + EQ+LIF++P VRKIVLATN+AE SITI
Sbjct: 129 SRLRDGLQNHHLLGDRKSVLIQTCHGLMETFEQKLIFDKPPPNVRKIVLATNVAEASITI 188
Query: 638 NDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
ND+VF++DCGK E+SYDALNNTPCLLP+WIS+ SA+QR+ G V P
Sbjct: 189 NDIVFIIDCGKTNESSYDALNNTPCLLPSWISQASARQRRG---RAGHVQPG 237
>Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1190
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 140/211 (66%), Gaps = 13/211 (6%)
Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
I RS LP K+AI S + +QVV+ISGETGCGKTTQ+PQ+IL+ +G C I
Sbjct: 180 ITVLRSKLPIASYKDAITSAVESHQVVLISGETGCGKTTQVPQYILDYMWG--KGETCKI 237
Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL-- 396
+CTQPRRISAMSVSER++ ERGE GE+VGYK+RL+ G+ + I+ CTTG+LLR L+
Sbjct: 238 LCTQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTTGVLLRVLVSK 297
Query: 397 ---------ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDA 447
A + +TH+I+DEIHER DF P L+L+LMSAT+D
Sbjct: 298 GSRRSMKNPAKDEISDITHIIMDEIHERDRYSDFMLAIMRDMLPLYPHLRLVLMSATIDT 357
Query: 448 ELFSSYFNGAPIMNIPGFTYPVRTYFLENIL 478
FS YF G P++ +PGFTYPV+TY+LE++L
Sbjct: 358 ARFSQYFGGCPVIQVPGFTYPVKTYYLEDVL 388
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 100/148 (67%), Gaps = 3/148 (2%)
Query: 543 PDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACH 602
P+ + LIE ++ IC + + G +LVF +GWDDI+ +EKLL ++ +P++ ++++ H
Sbjct: 532 PEIVDVVLIEQLIRKICTDSKDGGILVFFSGWDDINRAREKLLASSFFNNPSKFVVISLH 591
Query: 603 GSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPC 662
+ + EQ+ +F+ P G RKIVL+TN+AET++TI+D+V+V+D G+ KE SYD NN
Sbjct: 592 SMVPTLEQKKVFKRPPPGCRKIVLSTNLAETAVTIDDIVYVIDTGRMKEKSYDPYNNVST 651
Query: 663 LLPTWISKVSAQQRKSWSRSTGRVLPSL 690
L +WISK SA+QR+ + GR P +
Sbjct: 652 LQSSWISKASAKQREGRA---GRCQPGI 676
>Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1077
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 140/211 (66%), Gaps = 13/211 (6%)
Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
I RS LP K+AI S + +QVV+ISGETGCGKTTQ+PQ+IL+ +G C I
Sbjct: 67 ITVLRSKLPIASYKDAITSAVESHQVVLISGETGCGKTTQVPQYILDYMWG--KGETCKI 124
Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL-- 396
+CTQPRRISAMSVSER++ ERGE GE+VGYK+RL+ G+ + I+ CTTG+LLR L+
Sbjct: 125 LCTQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTTGVLLRVLVSK 184
Query: 397 ---------ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDA 447
A + +TH+I+DEIHER DF P L+L+LMSAT+D
Sbjct: 185 GSRRSMKNPAKDEISDITHIIMDEIHERDRYSDFMLAIMRDMLPLYPHLRLVLMSATIDT 244
Query: 448 ELFSSYFNGAPIMNIPGFTYPVRTYFLENIL 478
FS YF G P++ +PGFTYPV+TY+LE++L
Sbjct: 245 ARFSQYFGGCPVIQVPGFTYPVKTYYLEDVL 275
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 100/148 (67%), Gaps = 3/148 (2%)
Query: 543 PDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACH 602
P+ + LIE ++ IC + + G +LVF +GWDDI+ +EKLL ++ +P++ ++++ H
Sbjct: 419 PEIVDVVLIEQLIRKICTDSKDGGILVFFSGWDDINRAREKLLASSFFNNPSKFVVISLH 478
Query: 603 GSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPC 662
+ + EQ+ +F+ P G RKIVL+TN+AET++TI+D+V+V+D G+ KE SYD NN
Sbjct: 479 SMVPTLEQKKVFKRPPPGCRKIVLSTNLAETAVTIDDIVYVIDTGRMKEKSYDPYNNVST 538
Query: 663 LLPTWISKVSAQQRKSWSRSTGRVLPSL 690
L +WISK SA+QR+ + GR P +
Sbjct: 539 LQSSWISKASAKQREGRA---GRCQPGI 563
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 208/418 (49%), Gaps = 84/418 (20%)
Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILES--EIEAVRGA 334
+ + E R LP + +E +L ++ NQVV++ GETG GKTTQ+ Q++ E I + G
Sbjct: 562 KTLAEQRQYLPIFSVREELLQVIRENQVVVVVGETGSGKTTQLTQYLYEDGYTIGGIVG- 620
Query: 335 ACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRR 394
CTQPRR++AMSV++RV+ E +LG+ VGY +R E V G +T I + T G+LLR
Sbjct: 621 -----CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTVIKYMTDGVLLRE 675
Query: 395 LLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYF 454
L D +L+ +++DE HER ++ D R + KLI+ SATL+A+ FS +F
Sbjct: 676 TLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAQRRDFKLIVTSATLNAQKFSHFF 735
Query: 455 NGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQI 514
PI +IPG T+PV NIL + TP ++DY
Sbjct: 736 GSVPIFHIPGRTFPV------NIL----WSKTP---VEDY-------------------- 762
Query: 515 ASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGW 574
VE A++ A I PG +L+FMTG
Sbjct: 763 ---VEGAVKQA------------------------------MTIHVTSPPGDILIFMTGQ 789
Query: 575 DDIS----SLKEKLLRNNVLGDPN----RVLLLACHGSMASSEQRLIFEEPEDGVRKIVL 626
D+I SL E++ ++ N ++L+L + + + Q IF++ EDG RK ++
Sbjct: 790 DEIEAACYSLAERM--EQMVSSSNKEVPKLLILPIYSQLPADLQAKIFQKAEDGARKCIV 847
Query: 627 ATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTG 684
ATNIAETS+T++ + FV+D G K Y+ L +S+ +A QR + TG
Sbjct: 848 ATNIAETSLTVDGIFFVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTG 905
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 220/454 (48%), Gaps = 83/454 (18%)
Query: 250 AVAEKVLLRRSLQMRNQQHAWQESPEGRR---ILEFRSSLPAYKEKEAILSILSRNQVVI 306
A A+ V L N + W P +R ILE R +LP + +KE L +L NQ +I
Sbjct: 18 AAAKMVKTNGGLIGNNLINRWNGKPYSQRYHEILEKRKTLPVWHQKEDFLKVLKDNQTLI 77
Query: 307 ISGETGCGKTTQIPQFILES-EIEAV-RGAACNIICTQPRRISAMSVSERVASERGEKLG 364
+ GETG GKTTQIPQF+LE+ E+EA + I CTQPRR++AMSVS RVA E +G
Sbjct: 78 LVGETGSGKTTQIPQFVLEAVELEAPDKRKKMMIACTQPRRVAAMSVSRRVAEEMDVSIG 137
Query: 365 ESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXX 424
E VGY +R E T + + T G+LLR + D LE +I+DE HER + D
Sbjct: 138 EEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFG 197
Query: 425 XXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYR 484
+RP+LKL++MSATL+AE F Y +F ++++ G R
Sbjct: 198 LLKEVLKNRPDLKLVVMSATLEAEKFQGY------------------FFGAPLMKVPG-R 238
Query: 485 LTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPD 544
L P Y QE P + +E AIR
Sbjct: 239 LHPVEIF--YTQE---------PER------DYLEAAIR--------------------- 260
Query: 545 CIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNV-LGDP-NRVLLLACH 602
++++ +C E G +LVF+TG ++I K+ + +GD V + +
Sbjct: 261 ----TVVQIHMC-----EPAGDILVFLTGEEEIEDACRKISKEVANMGDQVGPVKAVPLY 311
Query: 603 GSMASSEQRLIFEEPEDGV-------RKIVLATNIAETSITINDVVFVLDCGKAKETSYD 655
++ + Q+ IFE V RKIV++TNIAETS+TI+ +V+V+D G AK+ Y+
Sbjct: 312 STLPPAMQQKIFEPAPPPVKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYN 371
Query: 656 ALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
LL + ISK SA QR S GR P
Sbjct: 372 PRVRVESLLVSPISKASAHQR---SGRAGRTQPG 402
>Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC |
chr2:4513881-4525364 | 20130731
Length = 701
Score = 189 bits (481), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 210/417 (50%), Gaps = 72/417 (17%)
Query: 283 RSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACN---II 339
R LP YK + AIL ++ + II GETG GKTTQIPQ+++E+ G A I
Sbjct: 50 RQRLPVYKYRNAILYLVETHSTTIIVGETGSGKTTQIPQYLIEA------GWASGGRLIA 103
Query: 340 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHIL-FCTTGILLRRLLAD 398
CTQPRR++ +VS RVA E G KLG+ VGY +R E V +D +L F T G+LLR ++ D
Sbjct: 104 CTQPRRLAVQAVSSRVAQEMGVKLGDQVGYTIRFEDVTNQDETVLKFVTDGVLLREMMND 163
Query: 399 RNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAP 458
L + V+VDE HER ++ D RPEL+LI+ SAT++A+
Sbjct: 164 PLLTKYSVVMVDEAHERSISTDILLGLLKKIQKRRPELRLIIASATIEAK---------- 213
Query: 459 IMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTV 518
++ F P + R P N ++ V
Sbjct: 214 --SMADFFRPRKK------------RREPENDVNGL----------------------KV 237
Query: 519 EDAIRAADFKDYSPQ---TQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWD 575
E AI + + + ++ Q +E + + + L+ I E E G VLVF+TG D
Sbjct: 238 EPAILSVEGRGFNVQINFAEEPVQDYVQAAVSTVLL------IHERESTGDVLVFLTGQD 291
Query: 576 DISS---LKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAE 632
DI + L + ++NN + +++L + + ++Q L+F G RK+V++TNIAE
Sbjct: 292 DIDAAVHLFNEEIQNN-RKHSSGLVVLPLYSGLPRADQELVFSPAPRGKRKVVISTNIAE 350
Query: 633 TSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
TS+T+ +V+V+D G +K+ Y+ +++ L+ IS+ SA+QR GRV P
Sbjct: 351 TSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISRASARQRAG---RAGRVRPG 404
>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
chr3:3875260-3882505 | 20130731
Length = 1731
Score = 177 bits (448), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 189/414 (45%), Gaps = 75/414 (18%)
Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
RR LE LP Y ++ IL + Q+ ++ GETG GK+TQ+ QF+ +S + GA
Sbjct: 259 RRRLE--DGLPIYAYRKEILQQIYHQQITVLIGETGSGKSTQLVQFLADSGV----GANE 312
Query: 337 NIICTQPRRISAMSVSERVASERGEKLGES-VGYKVRLEGVKGRDTHILFCTTGILLRRL 395
+I+CTQPRRI+A S++ERV E G +S + D+ I+F T LL+
Sbjct: 313 SIVCTQPRRIAAKSLAERVREESGGCYEDSSIKCYSSFSSWNKFDSRIIFMTDHCLLQHY 372
Query: 396 LADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFN 455
++D+N G++ +IVDE HER +N D R E++LI+MSAT DA+ S YF
Sbjct: 373 MSDKNFTGISCIIVDEAHERSINTDLLLALIKNLLSKRVEMRLIIMSATADAKQLSDYFY 432
Query: 456 GAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIA 515
G I +PG +PV ++ + E R S +
Sbjct: 433 GCGIFRVPGRNFPVEVRYVPSEYE---------------------------GRSHSSVVD 465
Query: 516 STVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWD 575
V D ++ A I E+ G +L F+T
Sbjct: 466 PYVSDVVKMAT------------------------------EIHRTEKEGTILAFLTSQL 495
Query: 576 DISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSI 635
D+ EK + + L HG ++S EQ IF+ G RK++ +TN+AETS+
Sbjct: 496 DVEWACEKF-------EAPSAVALPLHGKLSSEEQFHIFKN-YPGKRKVIFSTNVAETSL 547
Query: 636 TINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
TI V +V+D G K++ +D + L WIS+ SA+QR GR P
Sbjct: 548 TIPGVKYVIDSGLVKDSRFDPSSGMNVLKVCWISQSSAKQRAG---RAGRTEPG 598
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 174 bits (441), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 122/195 (62%), Gaps = 4/195 (2%)
Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
I E R SLP YK K+ ++ + NQV+++ GETG GKTTQ+ Q++ E+ RG I
Sbjct: 563 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY-TTRG---KI 618
Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLAD 398
CTQPRR++AMSV++RVA E G +LGE VGY +R E G DT I + T G+LLR +L D
Sbjct: 619 GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVD 678
Query: 399 RNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAP 458
NL + +++DE HER ++ D RPEL+LI+ SATLDAE FS YF
Sbjct: 679 ENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCN 738
Query: 459 IMNIPGFTYPVRTYF 473
I IPG T+PV +
Sbjct: 739 IFTIPGRTFPVEILY 753
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
Query: 544 DCIGFSLIEYILCNICENERPGAVLVFMTGWDDIS----SLKEKL--LRNNVLGDPNRVL 597
D + SLI + ++ E E G +L+F+TG ++I SL E++ L NV ++
Sbjct: 760 DYLDASLITVLQIHLTEPE--GDILLFLTGQEEIDFACQSLYERMKGLGKNV----PELI 813
Query: 598 LLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDAL 657
+L + ++ S Q IF+ G RK+V+ATNIAE S+TI+ + +V+D G AK+ Y+
Sbjct: 814 ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 873
Query: 658 NNTPCLLPTWISKVSAQQRKSWSRSTG 684
L+ T IS+ SA+QR + TG
Sbjct: 874 QGLDSLVITPISQASAKQRAGRAGRTG 900
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 174 bits (441), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 122/195 (62%), Gaps = 4/195 (2%)
Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
I E R SLP YK K+ ++ + NQV+++ GETG GKTTQ+ Q++ E+ RG I
Sbjct: 563 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY-TTRG---KI 618
Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLAD 398
CTQPRR++AMSV++RVA E G +LGE VGY +R E G DT I + T G+LLR +L D
Sbjct: 619 GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVD 678
Query: 399 RNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAP 458
NL + +++DE HER ++ D RPEL+LI+ SATLDAE FS YF
Sbjct: 679 ENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCN 738
Query: 459 IMNIPGFTYPVRTYF 473
I IPG T+PV +
Sbjct: 739 IFTIPGRTFPVEILY 753
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
Query: 544 DCIGFSLIEYILCNICENERPGAVLVFMTGWDDIS----SLKEKL--LRNNVLGDPNRVL 597
D + SLI + ++ E E G +L+F+TG ++I SL E++ L NV ++
Sbjct: 760 DYLDASLITVLQIHLTEPE--GDILLFLTGQEEIDFACQSLYERMKGLGKNV----PELI 813
Query: 598 LLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDAL 657
+L + ++ S Q IF+ G RK+V+ATNIAE S+TI+ + +V+D G AK+ Y+
Sbjct: 814 ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 873
Query: 658 NNTPCLLPTWISKVSAQQRKSWSRSTG 684
L+ T IS+ SA+QR + TG
Sbjct: 874 QGLDSLVITPISQASAKQRAGRAGRTG 900
>Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34489993-34479594 | 20130731
Length = 647
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 186/410 (45%), Gaps = 80/410 (19%)
Query: 284 SSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQP 343
++LP + +E I+ + N + +I GETG GK+TQ+ Q + R I TQP
Sbjct: 2 ATLPIVQYEEKIIETVENNSITVIIGETGSGKSTQLSQMLH-------RRGYSKIAVTQP 54
Query: 344 RRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEG 403
RR++A+SVS RVA E G +LGE VGY +R E R+T I + T G+LLR LAD L
Sbjct: 55 RRVAAVSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESLADPELND 114
Query: 404 VTHVIVDEIHERGMNEDFXXXXXXXXXXHRP-ELKLILMSATLDAELFSSYFNGAPIMNI 462
+ +I+DE HER +N D R LK+++ SATLD + S +F +
Sbjct: 115 YSVIILDEAHERSLNTDILMGLMKRLVKIRSSNLKVLITSATLDGDKVSKFFR-----DC 169
Query: 463 PGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAI 522
P P + Y +E + Y +ER
Sbjct: 170 PVLNIPGKLYPVEVL----------------YSKER------------------------ 189
Query: 523 RAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKE 582
++ D + +T + P+ G +L+FMTG DDI L
Sbjct: 190 -PVNYLDAALKTALDIHIRQPE--------------------GDILIFMTGQDDIEKLVM 228
Query: 583 KL---LRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIND 639
K+ +R G ++ HGS+ Q +F P R+I++ATNIAETS+T++
Sbjct: 229 KMEEKVRALDEGSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDG 288
Query: 640 VVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
VV+V+D G K+ Y+ + L ISKV A QR + GR P
Sbjct: 289 VVYVIDSGYVKQRQYNPSSRMYSLDVVQISKVQANQRAGRA---GRTRPG 335
>Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490015-34479594 | 20130731
Length = 697
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 186/410 (45%), Gaps = 80/410 (19%)
Query: 284 SSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQP 343
++LP + +E I+ + N + +I GETG GK+TQ+ Q + R I TQP
Sbjct: 2 ATLPIVQYEEKIIETVENNSITVIIGETGSGKSTQLSQMLH-------RRGYSKIAVTQP 54
Query: 344 RRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEG 403
RR++A+SVS RVA E G +LGE VGY +R E R+T I + T G+LLR LAD L
Sbjct: 55 RRVAAVSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESLADPELND 114
Query: 404 VTHVIVDEIHERGMNEDFXXXXXXXXXXHRP-ELKLILMSATLDAELFSSYFNGAPIMNI 462
+ +I+DE HER +N D R LK+++ SATLD + S +F +
Sbjct: 115 YSVIILDEAHERSLNTDILMGLMKRLVKIRSSNLKVLITSATLDGDKVSKFFR-----DC 169
Query: 463 PGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAI 522
P P + Y +E + Y +ER
Sbjct: 170 PVLNIPGKLYPVEVL----------------YSKER------------------------ 189
Query: 523 RAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKE 582
++ D + +T + P+ G +L+FMTG DDI L
Sbjct: 190 -PVNYLDAALKTALDIHIRQPE--------------------GDILIFMTGQDDIEKLVM 228
Query: 583 KL---LRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIND 639
K+ +R G ++ HGS+ Q +F P R+I++ATNIAETS+T++
Sbjct: 229 KMEEKVRALDEGSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDG 288
Query: 640 VVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
VV+V+D G K+ Y+ + L ISKV A QR + GR P
Sbjct: 289 VVYVIDSGYVKQRQYNPSSRMYSLDVVQISKVQANQRAGRA---GRTRPG 335
>Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490000-34479591 | 20130731
Length = 589
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 186/410 (45%), Gaps = 80/410 (19%)
Query: 284 SSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQP 343
++LP + +E I+ + N + +I GETG GK+TQ+ Q + R I TQP
Sbjct: 2 ATLPIVQYEEKIIETVENNSITVIIGETGSGKSTQLSQMLH-------RRGYSKIAVTQP 54
Query: 344 RRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEG 403
RR++A+SVS RVA E G +LGE VGY +R E R+T I + T G+LLR LAD L
Sbjct: 55 RRVAAVSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESLADPELND 114
Query: 404 VTHVIVDEIHERGMNEDFXXXXXXXXXXHRP-ELKLILMSATLDAELFSSYFNGAPIMNI 462
+ +I+DE HER +N D R LK+++ SATLD + S +F +
Sbjct: 115 YSVIILDEAHERSLNTDILMGLMKRLVKIRSSNLKVLITSATLDGDKVSKFFR-----DC 169
Query: 463 PGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAI 522
P P + Y +E + Y +ER
Sbjct: 170 PVLNIPGKLYPVEVL----------------YSKER------------------------ 189
Query: 523 RAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKE 582
++ D + +T + P+ G +L+FMTG DDI L
Sbjct: 190 -PVNYLDAALKTALDIHIRQPE--------------------GDILIFMTGQDDIEKLVM 228
Query: 583 KL---LRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIND 639
K+ +R G ++ HGS+ Q +F P R+I++ATNIAETS+T++
Sbjct: 229 KMEEKVRALDEGSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDG 288
Query: 640 VVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
VV+V+D G K+ Y+ + L ISKV A QR + GR P
Sbjct: 289 VVYVIDSGYVKQRQYNPSSRMYSLDVVQISKVQANQRAGRA---GRTRPG 335
>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
chr3:39323283-39316838 | 20130731
Length = 1718
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 192/415 (46%), Gaps = 76/415 (18%)
Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
RR LE LP Y + IL + Q+ ++ GETG GK+TQI QF+ +S I GA
Sbjct: 259 RRRLE--EGLPIYAYRREILQQIHHQQITVLIGETGSGKSTQIVQFLADSGI----GADE 312
Query: 337 NIICTQPRRISAMSVSERVASE-RGEKLGESV-GYKVRLEGVKGRDTHILFCTTGILLRR 394
I+CTQPR+I+A S++ERV E +G S+ Y K D+ I F T LL++
Sbjct: 313 TIVCTQPRKIAAKSLAERVQEESKGCYEENSIQCYSTFSSCQKFDDSRIAFMTDHCLLQQ 372
Query: 395 LLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYF 454
++DRNL GV+ +IVDE HER +N D R E++LI+MSAT DA+ S YF
Sbjct: 373 YMSDRNLSGVSCIIVDEAHERSLNTDLLLALIKNLLCKRVEMRLIIMSATADAKQLSDYF 432
Query: 455 NGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQI 514
G I ++ G +PV ++ + +YG+ + +
Sbjct: 433 YGCGIFHVLGRNFPVEVRYVPS----------------EYGEH-----------SGSAVL 465
Query: 515 ASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGW 574
A V D ++ A I + E+ GA+L F+T
Sbjct: 466 APYVFDVVKLAT------------------------------EIHKTEKEGAILAFLTSQ 495
Query: 575 DDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETS 634
++ E + + P HG ++S EQ +F++ G RK++ +TN+AETS
Sbjct: 496 VEVEWACENFKALSAVALP-------LHGKLSSEEQFHVFQK-YPGKRKVIFSTNLAETS 547
Query: 635 ITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
ITI V +V+D G K+ +D L WIS+ SA QR GR P
Sbjct: 548 ITIPGVKYVIDSGLVKDCRFDPCTGMNVLKVCWISQSSANQRAG---RAGRTEPG 599
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
E R LP Y ++ +L + +QV++I GETG GKTTQIPQ++ E A I C
Sbjct: 407 EERKKLPIYTYRDELLQAVHDHQVLVIVGETGSGKTTQIPQYLHE----AGYTKHGMIAC 462
Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
TQPRR++AMSV+ RVA E G KLG VGY +R E T + + T G+LLR L + +
Sbjct: 463 TQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPD 522
Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
L + V+VDE HER ++ D RP+LKL++ SATLDAE FS YF+ API
Sbjct: 523 LASYSVVMVDEAHERTLSTDILFALVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIF 582
Query: 461 NIPGFTYPVRTYF 473
IPG YPV +F
Sbjct: 583 KIPGRRYPVEIHF 595
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 564 PGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL-LLAC--HGSMASSEQRLIFEEPEDG 620
PG +L+F+TG ++I + +E +L++ G ++ L+ C + ++ + Q IFE +G
Sbjct: 620 PGDILIFLTGQEEIETAEE-ILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEG 678
Query: 621 VRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWS 680
RK+VLATNIAETS+TI+ + +V+D G K SY+ LL + ISK SA QR S
Sbjct: 679 ARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVSPISKASAMQRAGRS 738
Query: 681 RSTG 684
TG
Sbjct: 739 GRTG 742
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
E R LP Y ++ +L + +QV++I GETG GKTTQIPQ++ E A I C
Sbjct: 407 EERKKLPIYTYRDELLQAVHDHQVLVIVGETGSGKTTQIPQYLHE----AGYTKHGMIAC 462
Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
TQPRR++AMSV+ RVA E G KLG VGY +R E T + + T G+LLR L + +
Sbjct: 463 TQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPD 522
Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
L + V+VDE HER ++ D RP+LKL++ SATLDAE FS YF+ API
Sbjct: 523 LASYSVVMVDEAHERTLSTDILFALVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIF 582
Query: 461 NIPGFTYPVRTYF 473
IPG YPV +F
Sbjct: 583 KIPGRRYPVEIHF 595
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 564 PGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL-LLAC--HGSMASSEQRLIFEEPEDG 620
PG +L+F+TG ++I + +E +L++ G ++ L+ C + ++ + Q IFE +G
Sbjct: 620 PGDILIFLTGQEEIETAEE-ILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEG 678
Query: 621 VRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWS 680
RK+VLATNIAETS+TI+ + +V+D G K SY+ LL + ISK SA QR S
Sbjct: 679 ARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVSPISKASAMQRAGRS 738
Query: 681 RSTG 684
TG
Sbjct: 739 GRTG 742
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
E R LP Y ++ +L + +QV++I GETG GKTTQIPQ++ E A I C
Sbjct: 407 EERKKLPIYTYRDELLQAVHDHQVLVIVGETGSGKTTQIPQYLHE----AGYTKHGMIAC 462
Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
TQPRR++AMSV+ RVA E G KLG VGY +R E T + + T G+LLR L + +
Sbjct: 463 TQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPD 522
Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
L + V+VDE HER ++ D RP+LKL++ SATLDAE FS YF+ API
Sbjct: 523 LASYSVVMVDEAHERTLSTDILFALVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIF 582
Query: 461 NIPGFTYPVRTYF 473
IPG YPV +F
Sbjct: 583 KIPGRRYPVEIHF 595
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 564 PGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL-LLAC--HGSMASSEQRLIFEEPEDG 620
PG +L+F+TG ++I + +E +L++ G ++ L+ C + ++ + Q IFE +G
Sbjct: 620 PGDILIFLTGQEEIETAEE-ILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEG 678
Query: 621 VRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWS 680
RK+VLATNIAETS+TI+ + +V+D G K SY+ LL + ISK SA QR S
Sbjct: 679 ARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVSPISKASAMQRAGRS 738
Query: 681 RSTG 684
TG
Sbjct: 739 GRTG 742
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 115/193 (59%), Gaps = 3/193 (1%)
Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
E R LP Y K+ L + +QV++I GETG GKTTQIPQ++ E+ I C
Sbjct: 204 EERKKLPIYPFKDEFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEA---GYTKDGRMIAC 260
Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
TQPRR++AMSV+ RV+ E G KLG VGY +R E T + + T G+LLR L
Sbjct: 261 TQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTIVKYMTDGMLLREFLTQPE 320
Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
L+ + V+VDE HER ++ D RP+LKL++ SATLDAE FS+YF+ API
Sbjct: 321 LDSYSVVMVDEAHERTLSTDILFGLVKDVARARPDLKLLISSATLDAEKFSNYFDLAPIF 380
Query: 461 NIPGFTYPVRTYF 473
IPG YPV ++
Sbjct: 381 KIPGRRYPVEIHY 393
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 564 PGAVLVFMTGWDDISSLKEKL-LRNNVLGDP-NRVLLLACHGSMASSEQRLIFEEPEDGV 621
PG +LVF+ G ++I S++E L + LG + +++ + ++ + Q IFE G
Sbjct: 418 PGDILVFLAGQEEIESVEENLKYQMRGLGTKLDELIICPIYANLPTELQARIFEPTPKGA 477
Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSR 681
RK+VLATNIAETS+TI+ + +V+D G K Y+ LL T ISK SA QR S
Sbjct: 478 RKVVLATNIAETSLTIDGIKYVIDPGFFKMKCYNPRTGMESLLVTPISKASAMQRAGRSG 537
Query: 682 STG 684
TG
Sbjct: 538 RTG 540
>Medtr0267s0070.1 | NB-ARC domain disease resistance protein, putative
| LC | scaffold0267:17737-24509 | 20130731
Length = 1982
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 179/387 (46%), Gaps = 71/387 (18%)
Query: 304 VVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKL 363
+ ++ GETG GK+TQ+ QF+ +S + GA +I+CTQPRRI+A S++ERV E G
Sbjct: 937 ITVLIGETGSGKSTQLVQFLADSGV----GANESIVCTQPRRIAAKSLAERVREESGGCY 992
Query: 364 GES-VGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFX 422
+S + D+ I+F T LL+ ++D+NL G++ +IVDE HER +N D
Sbjct: 993 EDSSIKCYSSFSSWNKFDSRIIFMTDHCLLQHYMSDKNLSGISCIIVDEAHERSINTDLL 1052
Query: 423 XXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTG 482
R E++LI+MSAT DA+ S YF G I +PG +PV ++ + E
Sbjct: 1053 LALIKNLLSKRVEMRLIIMSATADAKQLSDYFYGCGIFRVPGRNFPVEVRYVPSEYE--- 1109
Query: 483 YRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWN 542
R S + V D ++ A + + +E
Sbjct: 1110 ------------------------GRSHSSVVDPYVSDVVKMATEIHRTEKEKE------ 1139
Query: 543 PDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACH 602
G +L F+T D+ EK + + L H
Sbjct: 1140 ----------------------GTILAFLTSQLDVEWACEKF-------EAPSAVALPLH 1170
Query: 603 GSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPC 662
G ++S EQ IF+ G RK++ +TN+AETS+TI V +V+D G K++ +D +
Sbjct: 1171 GKLSSEEQFHIFKN-YPGKRKVIFSTNVAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNV 1229
Query: 663 LLPTWISKVSAQQRKSWSRSTGRVLPS 689
L WIS+ SA+QR + GR P
Sbjct: 1230 LKVCWISQSSAKQR---AGHAGRTEPG 1253
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 163 bits (412), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 3/197 (1%)
Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
I E R LP Y ++ L + +QV++I GETG GKTTQIPQ++ E+ I
Sbjct: 247 IREERKKLPVYAVRDKFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEA---GYTKHGKMI 303
Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLAD 398
CTQPRR++AMSV+ RV+ E G KLG VGY +R E + T + + T G+LLR LA
Sbjct: 304 ACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFLAQ 363
Query: 399 RNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAP 458
L+ + V+VDE HER ++ D RP+LKL++ SATLDAE F ++F+ A
Sbjct: 364 PELDSYSVVMVDEAHERTLSTDILFGLLKDVARARPDLKLLISSATLDAEKFINFFDHAQ 423
Query: 459 IMNIPGFTYPVRTYFLE 475
IPG YPV +F E
Sbjct: 424 KFEIPGRPYPVEIHFTE 440
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 564 PGAVLVFMTGWDDISSLKEKL-LRNNVLGDPNRVLLLA-CHGSMASSEQRLIFEEPEDGV 621
PG +L+F+TG ++I + +E L LR LG L++ + ++ + Q IFE G
Sbjct: 463 PGDILLFLTGQEEIETAEEHLKLRVGALGTKIAELIICPIYANLPTEIQAKIFEPTPKGA 522
Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSR 681
RK+VLATNIAETS+TI+ + +V+D G K SY+ LL T ISK SA QR S
Sbjct: 523 RKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVTPISKASAMQRAGRSG 582
Query: 682 STG 684
TG
Sbjct: 583 RTG 585
>Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 587
Score = 163 bits (412), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 116/198 (58%), Gaps = 3/198 (1%)
Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
I E R LP Y ++ L + +QV++I GETG GKTTQIPQ++ E+ I
Sbjct: 247 IREERKKLPVYAVRDKFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEA---GYTKHGKMI 303
Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLAD 398
CTQPRR++AMSV+ RV+ E G KLG VGY +R E + T + + T G+LLR LA
Sbjct: 304 ACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFLAQ 363
Query: 399 RNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAP 458
L+ + V+VDE HER ++ D RP+LKL++ SATLDAE F ++F+ A
Sbjct: 364 PELDSYSVVMVDEAHERTLSTDILFGLLKDVARARPDLKLLISSATLDAEKFINFFDHAQ 423
Query: 459 IMNIPGFTYPVRTYFLEN 476
IPG YPV +F E
Sbjct: 424 KFEIPGRPYPVEIHFTEK 441
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Query: 564 PGAVLVFMTGWDDISSLKEKL-LRNNVLGDPNRVLLLA-CHGSMASSEQRLIFEEPEDGV 621
PG +L+F+TG ++I + +E L LR LG L++ + ++ + Q IFE G
Sbjct: 463 PGDILLFLTGQEEIETAEEHLKLRVGALGTKIAELIICPIYANLPTEIQAKIFEPTPKGA 522
Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSR 681
RK+VLATNIAETS+TI+ + +V+D G K SY+ LL T ISK SA QR S
Sbjct: 523 RKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVTPISKASAMQRAGRSG 582
Query: 682 STGRV 686
TG V
Sbjct: 583 RTGPV 587
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 162 bits (411), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 3/197 (1%)
Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
I E R LP Y ++ L + +QV++I GETG GKTTQIPQ++ E+ I
Sbjct: 247 IREERKKLPVYAVRDKFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEA---GYTKHGKMI 303
Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLAD 398
CTQPRR++AMSV+ RV+ E G KLG VGY +R E + T + + T G+LLR LA
Sbjct: 304 ACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFLAQ 363
Query: 399 RNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAP 458
L+ + V+VDE HER ++ D RP+LKL++ SATLDAE F ++F+ A
Sbjct: 364 PELDSYSVVMVDEAHERTLSTDILFGLLKDVARARPDLKLLISSATLDAEKFINFFDHAQ 423
Query: 459 IMNIPGFTYPVRTYFLE 475
IPG YPV +F E
Sbjct: 424 KFEIPGRPYPVEIHFTE 440
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 564 PGAVLVFMTGWDDISSLKEKL-LRNNVLGDPNRVLLLA-CHGSMASSEQRLIFEEPEDGV 621
PG +L+F+TG ++I + +E L LR LG L++ + ++ + Q IFE G
Sbjct: 463 PGDILLFLTGQEEIETAEEHLKLRVGALGTKIAELIICPIYANLPTEIQAKIFEPTPKGA 522
Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSR 681
RK+VLATNIAETS+TI+ + +V+D G K SY+ LL T ISK SA QR S
Sbjct: 523 RKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVTPISKASAMQRAGRSG 582
Query: 682 STG 684
TG
Sbjct: 583 RTG 585
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 133/252 (52%), Gaps = 28/252 (11%)
Query: 250 AVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISG 309
+ A+ V L N+ + SP ILE R +LP + +K+ L NQ++I+ G
Sbjct: 18 STAKTVKTNGGLIGNNRWNGKPYSPSYFEILEKRKTLPVWHQKDDFLQFFKDNQILILVG 77
Query: 310 ETGCGKTTQ--------------------------IPQFILES-EIEAV-RGAACNIICT 341
ETG GKTTQ IPQF+LE+ ++E + I CT
Sbjct: 78 ETGSGKTTQLSFCNLILLTMRRRCHGTEAPDFFMHIPQFVLEAVDLETPDKHKKMMIACT 137
Query: 342 QPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNL 401
QPRR++AMSVS RVA E +GE VGY +R E T + F T G+LLR + D L
Sbjct: 138 QPRRVAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSAKTVLKFLTDGMLLREAMTDPLL 197
Query: 402 EGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIMN 461
E +I+DE HER + D +RP+LKL++MSATL+AE F SYF GAP+M
Sbjct: 198 ERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFKSYFLGAPLMK 257
Query: 462 IPGFTYPVRTYF 473
+ G +PV+ ++
Sbjct: 258 VRGRLHPVKIFY 269
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 18/140 (12%)
Query: 562 ERPGAVLVFMTGWDDISSLKEKL-----LRNNVLGDPNRVLLLACHGSMASSEQRLIFEE 616
E G VLVF+TG ++I K+ +R + +G P +V+ L + ++ + Q IFE
Sbjct: 292 EPAGDVLVFLTGEEEIEDACRKISNEVAIRGDTVG-PVKVVPL--YSTLPPAMQHRIFEP 348
Query: 617 P-----EDGV--RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWIS 669
E G+ RKI+++TNIAETS+TIN +V+V+D G AK+ Y+ LL + IS
Sbjct: 349 APPPVREGGLPGRKILVSTNIAETSLTINGIVYVVDPGLAKQKVYNPRARVESLLVSPIS 408
Query: 670 KVSAQQRKSWSRSTGRVLPS 689
K SA QR S GR P
Sbjct: 409 KASAVQR---SGRAGRTQPG 425
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 159 bits (403), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 133/254 (52%), Gaps = 22/254 (8%)
Query: 238 LFEQPVLLASSKAVAEKVLLRRSLQMRNQQH-------------AWQ----ESPEGRRIL 280
+F+ P A + L++ ++R QQ W+ ES E
Sbjct: 435 IFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQ 494
Query: 281 EFRS-SLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNII 339
E R L AY E + NQV+++ GETG GKTTQ+ Q++ E RG I
Sbjct: 495 ELRGVGLSAYDMPEWKKEAVHDNQVLVVIGETGSGKTTQVTQYLAEVGY-TTRG---KIG 550
Query: 340 CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADR 399
CTQPRR++AMSV++RVA E G +LGE VGY +R E G DT I + T G+LLR +L D
Sbjct: 551 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDE 610
Query: 400 NLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPI 459
+L + +++DE HER + D RPEL+LI+ SATLDAE FS YF I
Sbjct: 611 SLSQYSVIMLDEAHERTIYTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNI 670
Query: 460 MNIPGFTYPVRTYF 473
IPG T+PV +
Sbjct: 671 FTIPGRTFPVEILY 684
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
Query: 544 DCIGFSLIEYILCNICENERPGAVLVFMTGWDDIS----SLKEKL--LRNNVLGDPNRVL 597
D + SLI + ++ E E G +L+F+TG ++I SL E++ L NV ++
Sbjct: 691 DYLDASLITVLQIHLTEPE--GDILLFLTGQEEIDFACQSLHERMKGLGKNV----PELI 744
Query: 598 LLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDAL 657
+L + ++ S Q IF+ G RK+V+ATNIAE S+TI+ + +V+D G AK+ Y+
Sbjct: 745 ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 804
Query: 658 NNTPCLLPTWISKVSAQQRKSWSRSTG 684
L+ T IS+ SA+QR + TG
Sbjct: 805 QGLDSLVITPISQASAKQRAGRAGRTG 831
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 119/195 (61%), Gaps = 8/195 (4%)
Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILES--EIEAVRGA 334
+ + E R LP + +E +L ++ NQVV++ GETG GKTTQ+ Q++ E I + G
Sbjct: 359 KTLTEQRQYLPIFSVREELLQVIRENQVVVVVGETGSGKTTQLTQYLYEDGYTIGGIVG- 417
Query: 335 ACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRR 394
CTQPRR++AMSV++RV+ E +LG+ VGY +R E V G +T I + T G+LLR
Sbjct: 418 -----CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTIIKYMTDGVLLRE 472
Query: 395 LLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYF 454
L D +L+ +++DE HER ++ D R + KLI+ SATL+A+ FS +F
Sbjct: 473 TLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVTQRRDFKLIVTSATLNAQKFSHFF 532
Query: 455 NGAPIMNIPGFTYPV 469
PI +IPG T+P+
Sbjct: 533 GNVPIFHIPGRTFPI 547
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 564 PGAVLVFMTGWDDIS----SLKEKLLRNNVLGDPNR----VLLLACHGSMASSEQRLIFE 615
PG +L+FMTG D+I SL EK+ ++ N+ +L+L + + + Q IF+
Sbjct: 576 PGDILIFMTGQDEIEAACYSLAEKM--EQMVSSSNKEVPKLLILPVYSQLPADLQAKIFQ 633
Query: 616 EPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQ 675
+ EDG RK ++ATNIAETS+T++ + +V+D G K Y+ L +S+ +A Q
Sbjct: 634 KAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSQAAANQ 693
Query: 676 RKSWSRSTG 684
R + TG
Sbjct: 694 RAGRAGRTG 702
>Medtr1g088590.1 | zinc finger CCCH domain protein | HC |
chr1:39615599-39607040 | 20130731
Length = 1022
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 194/416 (46%), Gaps = 69/416 (16%)
Query: 284 SSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQP 343
S LP ++ I+ + +N+V +I GETGCGK++QIPQF+LE + I+CT P
Sbjct: 28 SHLPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEENMTP-------ILCTLP 80
Query: 344 RRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEG 403
RR + +SV++ VA R +LGE VGY + + I+F T G+LL + ++ L
Sbjct: 81 RRFAVVSVAKMVAKARNCQLGEEVGYHIGHSRHFSASSEIVFKTAGVLLDE-MQEKGLTA 139
Query: 404 VTH--VIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNG----- 456
+ + +I+DE+HER + D +L+++LMSAT D + YF
Sbjct: 140 LKYKVIILDEVHERSVESDLVLVCVKQFLLKNNDLRVVLMSATADISRYRDYFRDLGRGE 199
Query: 457 -APIMNIPG----FTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRK 511
++ IP + +L+ + E G ++ K
Sbjct: 200 RVEVLAIPSSNQNMLFQRSVSYLDQVAETLGI------------------TSEIMHSKYS 241
Query: 512 SQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENE--RPGAVLV 569
S + ++ +A ++ SLI ++ +I ENE ++LV
Sbjct: 242 SCLNPSISNAYIKSELH--------------------SLIHELVLHIHENEPDIEKSILV 281
Query: 570 FMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATN 629
F+ + SL+++ L RV +L HGS+ +EQ L+ + RK++LATN
Sbjct: 282 FLPTY---YSLEQQWRLLKPLESTFRVHIL--HGSI-DTEQALMTMKIWKSHRKVILATN 335
Query: 630 IAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGR 685
IAE+S+TI V +V+D ++ + +D C W+SK A+QR S TGR
Sbjct: 336 IAESSVTIPKVAYVIDSCRSLQVYWDKSRKKDCSALVWVSKSQAKQR---SGRTGR 388
>Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC |
chr7:38011601-38003021 | 20130731
Length = 725
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 122/243 (50%), Gaps = 45/243 (18%)
Query: 273 SPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVR 332
SP ++I+E R SLP ++ ++ + +N ++II GETG GKTTQIPQF+ +
Sbjct: 35 SPRRQKIIEQRKSLPIASVEKRLIEEVQKNDILIIVGETGSGKTTQIPQFLFHAGF-CHD 93
Query: 333 GAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILL 392
G I TQPRR++A++V++RVA E G +LG+ VGY VR + T I + T G+LL
Sbjct: 94 GKVVGI--TQPRRVAAITVAKRVAEECGYELGQKVGYSVRFDDSTSNSTRIKYMTDGLLL 151
Query: 393 RRLLADRNLEGVTHVIVDEIHERG------------------------------------ 416
R L D L + +IVDE HER
Sbjct: 152 REALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKKVQHARSNSIKDGRNLDNGNKNTNG 211
Query: 417 ---MNEDFXXXXXXXXXXHRPE---LKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVR 470
+++D HR + LKLI+MSA+LDA FS YF GA ++I G +PV
Sbjct: 212 FMLLDKDNGQNGSFLRKGHREKSSPLKLIIMSASLDARTFSEYFGGAKAVHIQGRQFPVD 271
Query: 471 TYF 473
++
Sbjct: 272 IFY 274
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Query: 555 LCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPN---RVLLLACHGSMASSEQR 611
+ + ++E PG +LVF+TG ++I ++ E+L++ + P ++ +L + ++ S +Q
Sbjct: 290 IFQVHQDEAPGDILVFLTGQEEIDAV-ERLIKERLSKLPQENQKLQVLPIYAALPSEQQM 348
Query: 612 LIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKV 671
FE G RK++LATNIAETSITI + V+D G K SYD L+ SK
Sbjct: 349 RAFEPAPSGFRKVILATNIAETSITIPGIKHVIDPGLVKARSYDPGKGMESLIVVPTSKS 408
Query: 672 SAQQRKSWSRSTG 684
A QR + G
Sbjct: 409 QALQRSGRAGREG 421
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 316 TTQIPQFILESEIEAVRGA--ACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRL 373
TTQIPQF+LE+ R + CTQPRR++A+SVS RVA E +GE VGY +R
Sbjct: 49 TTQIPQFVLEAVDLETRDKHRKMMVACTQPRRVAALSVSRRVAEEMDVSIGEEVGYSIRF 108
Query: 374 EGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHR 433
E T + + T G+LLR + D LE +I+DE HER + D +R
Sbjct: 109 EDCSSSRTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDLLFGLLKEILRNR 168
Query: 434 PELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYF 473
+LKL++MSATL+AE F SYF GAP+M +PG +PV +
Sbjct: 169 TDLKLVVMSATLEAEKFKSYFFGAPLMKVPGRLHPVEIRY 208
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 14/145 (9%)
Query: 555 LCNICENERPGAVLVFMTGWDDISSLKEKLLRNNV--LGDP-NRVLLLACHGSMASSEQR 611
+ I E G +LVF+TG ++I K+ N V LG+ V +L+ + ++ + Q+
Sbjct: 224 VVEIHTKEPAGDILVFLTGEEEIEDACRKI-SNKVANLGEKVGPVKVLSLYSTLPPAMQQ 282
Query: 612 LIFEEP-----EDGV--RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLL 664
IFE E G+ RKIV++TNIAETS+TI+ +V+V+D G AK+ Y+ LL
Sbjct: 283 KIFEPAPPPVKEGGLPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRTRVESLL 342
Query: 665 PTWISKVSAQQRKSWSRSTGRVLPS 689
+ ISK SA QR S GR P
Sbjct: 343 VSPISKASAHQR---SGRAGRTQPG 364
>Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,
putative | HC | chr4:7996592-7989993 | 20130731
Length = 1331
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 124/241 (51%), Gaps = 29/241 (12%)
Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVR-GAACN 337
+ E R LP ++ I+ ++ N VI+ GETGCGKTTQ+PQF+ E+ + + A
Sbjct: 265 VQEKRKDLPIVMMEQEIMEAINYNSSVIVCGETGCGKTTQVPQFLYEAGYGSSKFHARSG 324
Query: 338 II-CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
II TQPRR++ ++ ++RVA E G +LG+ VG++VR + G + I F T GILLR +
Sbjct: 325 IIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGILLREVQ 384
Query: 397 ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPE--------------------- 435
D L + +I+DE HER +N D R +
Sbjct: 385 NDILLRRYSVLILDEAHERSLNTDILIGMLSRVIRTRQKIYDEQQKMVLSGESISPDKMV 444
Query: 436 --LKLILMSATLDAELFSS---YFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQ 490
LKL+LMSATL + F+S + P++ +P +PV YF + E+T Y Y +
Sbjct: 445 FPLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTMYFAKKT-EITDYVGAAYKK 503
Query: 491 I 491
I
Sbjct: 504 I 504
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%)
Query: 573 GWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAE 632
G D +EK+ R N P + +L + + ++ Q +F+ ++G R +V+ATN+AE
Sbjct: 669 GLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAE 728
Query: 633 TSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQR 676
TS+TI + +V+D G+ K +YD+ N WISK SA QR
Sbjct: 729 TSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQR 772
>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr8:15840782-15843798 | 20130731
Length = 650
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 111/214 (51%), Gaps = 41/214 (19%)
Query: 265 NQQHAWQESPEGRRILEF----RSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIP 320
Q+ A ++S R + E R LP Y ++ L + +QV++I GETG GKTTQIP
Sbjct: 81 GQEIALKKSSAKRSVFEALQEERKKLPIYPFRDEFLQAVHDHQVLVIVGETGSGKTTQIP 140
Query: 321 QFILESE-IEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGR 379
Q++ E+ I+ R AC TQPRR++AMSV+ RV+ E G KLG
Sbjct: 141 QYLHEAGYIKHGRMLAC----TQPRRVAAMSVAARVSEEMGVKLGH-------------- 182
Query: 380 DTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLI 439
+ L+ + ++VDE HER ++ D RP+LKL+
Sbjct: 183 ------------------EPELDSYSVIMVDEAHERTLSTDILFGLVKDVARTRPDLKLL 224
Query: 440 LMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYF 473
+ SATLDA+ FS+YF+ API IPG YPV +F
Sbjct: 225 ISSATLDAKKFSNYFDLAPIFKIPGRRYPVEIHF 258
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 557 NICENERPGAVLVFMTGWDDISSLKEKLL-RNNVLGDPNRVLLLA-CHGSMASSEQRLIF 614
I + P +LVF++G ++I +++E L R LG L++ + ++ + Q IF
Sbjct: 276 QIHATQSPREILVFLSGQEEIETVEEILKHRMRRLGTKIAELIICPIYANLPTEPQAKIF 335
Query: 615 EEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNT 660
E +G RK+VLATNIAET +TI+ + +V+D G K D ++T
Sbjct: 336 EPTPEGARKVVLATNIAETPVTIDGIKYVIDPGFCKIFENDLEDDT 381
>Medtr4g120070.1 | RNA helicase, putative | HC |
chr4:49772806-49778936 | 20130731
Length = 1256
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 57/210 (27%)
Query: 338 IICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILL----- 392
I TQPRR++ ++ ++RVA E G +LG+ VG++VR + G + I F T GILL
Sbjct: 222 IGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGILLIMCHC 281
Query: 393 ----------------------RRLLADRN---LEGVTHVIVDEIHERGMNEDFXXXXXX 427
++ N L + +I+DE HER +N D
Sbjct: 282 YYYCGSVAAVYYIVMILFIPLYTQICCSDNDILLRRYSVLILDEAHERSLNTDILIGMLS 341
Query: 428 XXXXHRPE-----------------------LKLILMSATLDAELFSS---YFNGAPIMN 461
R + LKL+LMSATL + F+S + + P++
Sbjct: 342 RVIRTRQKIYDEQQKMVLSGESISLDKMVFPLKLVLMSATLRVQDFTSGRLFHSPPPVIE 401
Query: 462 IPGFTYPVRTYFLENILEMTGYRLTPYNQI 491
+P +PV YF + E+T Y Y +I
Sbjct: 402 VPTRKFPVTVYFAKKT-EITDYVGAAYKKI 430
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 581 KEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDV 640
+EK+ R N P + +L + + ++ Q +F+ ++G R +V+ATN+AETS+TI +
Sbjct: 603 REKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGI 662
Query: 641 VFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQR 676
+V+D G+ K +YD+ N WISK SA QR
Sbjct: 663 KYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQR 698
>Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein | HC
| chr4:39455746-39462206 | 20130731
Length = 519
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 555 LCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPN---RVLLLACHGSMASSEQR 611
+ + ++E PG +LVF+TG ++I ++ E+L++ + P R+ ++ + ++ S +Q
Sbjct: 78 IFQVHQDEAPGDILVFLTGQEEIDAV-ERLIKERLSKLPQEYQRLQVVPIYAALPSEQQM 136
Query: 612 LIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYD 655
F G K++LATNIAETSITI + +V+D G K SYD
Sbjct: 137 RAFAPAPSGFHKVILATNIAETSITIPGIKYVIDPGLVKARSYD 180
>Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | scaffold1543:1149-130 | 20130731
Length = 304
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%)
Query: 595 RVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSY 654
++L+L + + + Q IF++ EDG RK ++ATNIAETS+T++ + +V+D G K Y
Sbjct: 14 KLLILPVYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 73
Query: 655 DALNNTPCLLPTWISKVSAQQRKSWSRSTG 684
+ L S+ +A QR + TG
Sbjct: 74 NPRMGMDALQVFPFSQAAANQRAGRAGRTG 103