Miyakogusa Predicted Gene

Lj5g3v2169480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2169480.1 Non Characterized Hit- tr|I1NFR9|I1NFR9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58359
PE,81.53,0,seg,NULL; tatC: twin arginine-targeting protein translocase
,Sec-independent periplasmic protein tra,CUFF.56821.1
         (346 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g109080.1 | Sec-independent protein translocase TatC | HC ...   453   e-127

>Medtr1g109080.1 | Sec-independent protein translocase TatC | HC |
           chr1:49283506-49280146 | 20130731
          Length = 343

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/353 (69%), Positives = 273/353 (77%), Gaps = 17/353 (4%)

Query: 1   MGLVTTTVHMNLIVPQFGPLRNHSTSIRVSTSA-------RNRRSSLAGFVCFXXXXXXX 53
           MGL T TV MN I+PQFG LR H T IRV+ S+       R R  S   FVCF       
Sbjct: 1   MGLGTATVPMN-ILPQFGLLRTHLTPIRVNNSSGFTFPLSRRRNRSFGKFVCFAVDDEL- 58

Query: 54  RQNQQPLSTTATGPASALEERPATDLLNSTTEETLGNLEQDGEKGALYDFLYPSKELLPD 113
           RQNQQ LST++    SA+EERP        +EE L N ++DGE+ A+YDFLYP KELLPD
Sbjct: 59  RQNQQQLSTSSNRVGSAIEERP--------SEEALENFKEDGERSAIYDFLYPDKELLPD 110

Query: 114 DKEMSIFDHLEELRQRIFVSVLVVGASILGCFAYSKELVKLLEAPVKSEGVKFLQLAPGE 173
           DKEMSIFDHLEELRQRIF+SVL VG SILGCFA+SK+LV+LLEAPV+SEGV+FLQLAPGE
Sbjct: 111 DKEMSIFDHLEELRQRIFISVLGVGGSILGCFAFSKDLVRLLEAPVQSEGVRFLQLAPGE 170

Query: 174 FFFTTLKVSGYSGILLGSPIILYEIIAFVLPGLTKSERRFLGPIVLGSSVLFYAGIAFSY 233
           FFFTTLKVSGY G+LLGSPIILYEIIAF++PGLTK+ERRFLGPIVLGSSVLFYAGI FSY
Sbjct: 171 FFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKAERRFLGPIVLGSSVLFYAGITFSY 230

Query: 234 LVLTPAALNFFVDYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQVGLVSG 293
           LVL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVP+IQ LLGQ+GLV+G
Sbjct: 231 LVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPIIQLLLGQLGLVTG 290

Query: 294 DQMLSVWRYXXXXXXXXXXXXTPSTDPLTQVXXXXXXXXXXXXXAWAVKLTGR 346
           D+MLSVWRY            TPSTDPLTQV             AW VKL GR
Sbjct: 291 DRMLSVWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLAGR 343