Miyakogusa Predicted Gene

Lj5g3v2167340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2167340.1 tr|F2DRD2|F2DRD2_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,31.68,7e-19,FAMILY NOT
NAMED,NULL,CUFF.56805.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g108460.1 | transmembrane protein, putative | HC | chr1:49...   212   1e-55
Medtr1g108460.2 | transmembrane protein, putative | HC | chr1:49...   195   1e-50
Medtr2g450550.3 | transmembrane protein, putative | HC | chr2:22...   132   1e-31
Medtr2g450550.1 | transmembrane protein, putative | HC | chr2:22...   132   2e-31
Medtr3g106510.1 | transmembrane protein, putative | HC | chr3:49...   121   2e-28
Medtr2g450550.2 | transmembrane protein, putative | HC | chr2:22...   117   4e-27
Medtr4g116290.1 | transmembrane protein, putative | LC | chr4:48...   108   3e-24

>Medtr1g108460.1 | transmembrane protein, putative | HC |
           chr1:49022976-49027799 | 20130731
          Length = 560

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 100/146 (68%), Positives = 112/146 (76%)

Query: 12  FIIIGWLLVAATFILSGVFMILDNVISDTCMETGEWAANPHKESTLSCVLPCVDQRTTNK 71
           F+I GWLLVA TFIL GVFMIL+N ISDTCM  GEW  NPH+ES LS VLPCVDQRTTNK
Sbjct: 291 FVITGWLLVATTFILCGVFMILNNTISDTCMAMGEWVENPHRESALSDVLPCVDQRTTNK 350

Query: 72  TLIQSTQVANYIATIVNRFIYETTNINATRGTLGYYNQSGSLMLPLCIPFDSQYQERPCE 131
           TL QS QV   IA IVN  IY T N+NAT+G  G+YNQSG  M PLC PFD Q++ER C 
Sbjct: 351 TLFQSKQVVTNIANIVNTVIYTTANVNATKGHPGFYNQSGPPMPPLCYPFDDQFRERQCT 410

Query: 132 DQEISSANASMVWKKSECEVCDSSIC 157
           +QE+SSANASMVW+   CEV +S IC
Sbjct: 411 NQEVSSANASMVWENYVCEVSESGIC 436


>Medtr1g108460.2 | transmembrane protein, putative | HC |
           chr1:49022991-49027799 | 20130731
          Length = 439

 Score =  195 bits (496), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 103/132 (78%)

Query: 12  FIIIGWLLVAATFILSGVFMILDNVISDTCMETGEWAANPHKESTLSCVLPCVDQRTTNK 71
           F+I GWLLVA TFIL GVFMIL+N ISDTCM  GEW  NPH+ES LS VLPCVDQRTTNK
Sbjct: 291 FVITGWLLVATTFILCGVFMILNNTISDTCMAMGEWVENPHRESALSDVLPCVDQRTTNK 350

Query: 72  TLIQSTQVANYIATIVNRFIYETTNINATRGTLGYYNQSGSLMLPLCIPFDSQYQERPCE 131
           TL QS QV   IA IVN  IY T N+NAT+G  G+YNQSG  M PLC PFD Q++ER C 
Sbjct: 351 TLFQSKQVVTNIANIVNTVIYTTANVNATKGHPGFYNQSGPPMPPLCYPFDDQFRERQCT 410

Query: 132 DQEISSANASMV 143
           +QE+SSANASMV
Sbjct: 411 NQEVSSANASMV 422


>Medtr2g450550.3 | transmembrane protein, putative | HC |
           chr2:22448047-22452347 | 20130731
          Length = 423

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 13  IIIGWLLVAATFILSGVFMILDNVISDTCMETGEWAANPHKESTLSCVLPCVDQRTTNKT 72
           +I+GW LV  TFIL GVF+ + N + DTC+   EW  +P   + L  +LPCVD  T  +T
Sbjct: 179 VILGWFLVTGTFILCGVFLFVHNAVGDTCVAMDEWVQHPTAHTALDEILPCVDNATAQQT 238

Query: 73  LIQSTQVANYIATIVNRFIYETTNIN--ATRGTLGYYNQSGSLMLPLCIPFDSQYQERPC 130
           L+QS  VA  +  +V++ I + TN N  A  G + YYNQSG LM PLC PF+     RPC
Sbjct: 239 LLQSRDVARQLVILVDKIISDVTNRNLPAQAGPV-YYNQSGPLMPPLCNPFNPDLTVRPC 297

Query: 131 EDQEISSANASMVWKKSECEVCDSSIC 157
              E+   NA+ VWK   CE+  + +C
Sbjct: 298 VPGEVPLDNATEVWKNYTCEISPAGLC 324


>Medtr2g450550.1 | transmembrane protein, putative | HC |
           chr2:22446274-22452477 | 20130731
          Length = 528

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 6/155 (3%)

Query: 5   LIYLFCRFIIIGWLLVAATFILSGVFMILDNVISDTCMETGEWAANPHKESTLSCVLPCV 64
           L+Y     +I+GW LV  TFIL GVF+ + N + DTC+   EW  +P   + L  +LPCV
Sbjct: 279 LVYFL---VILGWFLVTGTFILCGVFLFVHNAVGDTCVAMDEWVQHPTAHTALDEILPCV 335

Query: 65  DQRTTNKTLIQSTQVANYIATIVNRFIYETTNIN--ATRGTLGYYNQSGSLMLPLCIPFD 122
           D  T  +TL+QS  VA  +  +V++ I + TN N  A  G + YYNQSG LM PLC PF+
Sbjct: 336 DNATAQQTLLQSRDVARQLVILVDKIISDVTNRNLPAQAGPV-YYNQSGPLMPPLCNPFN 394

Query: 123 SQYQERPCEDQEISSANASMVWKKSECEVCDSSIC 157
                RPC   E+   NA+ VWK   CE+  + +C
Sbjct: 395 PDLTVRPCVPGEVPLDNATEVWKNYTCEISPAGLC 429


>Medtr3g106510.1 | transmembrane protein, putative | HC |
           chr3:49224097-49228278 | 20130731
          Length = 575

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 91/154 (59%), Gaps = 4/154 (2%)

Query: 5   LIYLFCRFIIIGWLLVAATFILSGVFMILDNVISDTCMETGEWAANPHKESTLSCVLPCV 64
           L+Y+    +I GW LV  T IL G+F+IL NV +DTC+   EW   P   + L  +LPCV
Sbjct: 279 LVYIL---VIAGWFLVTGTLILCGLFLILHNVTADTCVAMNEWIQYPTANTALDDILPCV 335

Query: 65  DQRTTNKTLIQSTQVANYIATIVNRFIYETTNIN-ATRGTLGYYNQSGSLMLPLCIPFDS 123
           D+ T  +TL++S +V + +  +VN+ I   +NIN A   T  YYNQSG LM  LC PF  
Sbjct: 336 DKATAQETLLRSKEVTSELVNLVNQVITNVSNINFAPNFTPLYYNQSGPLMPLLCDPFRP 395

Query: 124 QYQERPCEDQEISSANASMVWKKSECEVCDSSIC 157
              +R C+  E++ +NA+ V+    C+V  S IC
Sbjct: 396 DMTDRQCDSGEVNISNATQVYGNFVCQVSPSEIC 429


>Medtr2g450550.2 | transmembrane protein, putative | HC |
           chr2:22446314-22450936 | 20130731
          Length = 470

 Score =  117 bits (293), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 82/141 (58%), Gaps = 6/141 (4%)

Query: 5   LIYLFCRFIIIGWLLVAATFILSGVFMILDNVISDTCMETGEWAANPHKESTLSCVLPCV 64
           L+Y     +I+GW LV  TFIL GVF+ + N + DTC+   EW  +P   + L  +LPCV
Sbjct: 279 LVYFL---VILGWFLVTGTFILCGVFLFVHNAVGDTCVAMDEWVQHPTAHTALDEILPCV 335

Query: 65  DQRTTNKTLIQSTQVANYIATIVNRFIYETTNIN--ATRGTLGYYNQSGSLMLPLCIPFD 122
           D  T  +TL+QS  VA  +  +V++ I + TN N  A  G + YYNQSG LM PLC PF+
Sbjct: 336 DNATAQQTLLQSRDVARQLVILVDKIISDVTNRNLPAQAGPV-YYNQSGPLMPPLCNPFN 394

Query: 123 SQYQERPCEDQEISSANASMV 143
                RPC   E+   NA+ V
Sbjct: 395 PDLTVRPCVPGEVPLDNATEV 415


>Medtr4g116290.1 | transmembrane protein, putative | LC |
           chr4:48124806-48121219 | 20130731
          Length = 496

 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 5/149 (3%)

Query: 3   LCLIYLFCRFIIIGWLLVAATFILSGVFMILDNVISDTCMETGEWAANPHKESTLSCVLP 62
           L L Y     +  GW+LVA TFIL G F+ L N I DTC+   EW  NP   ++L  +LP
Sbjct: 251 LGLKYTLYSLVFAGWILVAGTFILCGAFVFLHNAIGDTCVAMDEWVLNPTAHTSLDEILP 310

Query: 63  CVDQRTTNKTLIQSTQVANYIATIVNRFIYETTNINATRGTLGYYNQSGSLMLPLCIPFD 122
           C++  +T++T +QS  V   +A  +N FI    N N+       +NQS   M  LC PF+
Sbjct: 311 CIEIESTHETFLQSKSVIYSLANSINGFISIILNGNSMS-----HNQSAPSMPLLCNPFN 365

Query: 123 SQYQERPCEDQEISSANASMVWKKSECEV 151
           S +  R C   E++  NA+  WK   C+V
Sbjct: 366 SDFTVRDCAAGEVAFENATEAWKNYTCQV 394