Miyakogusa Predicted Gene

Lj5g3v2167330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2167330.1 Non Characterized Hit- tr|I1LEN6|I1LEN6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18746
PE,87.86,0,seg,NULL; coiled-coil,NULL; TPR_REGION,Tetratricopeptide
repeat-containing domain; SUBFAMILY NOT NAM,CUFF.56820.1
         (420 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g108650.1 | TPR repeat protein | HC | chr1:49100693-491077...   684   0.0  

>Medtr1g108650.1 | TPR repeat protein | HC | chr1:49100693-49107738
           | 20130731
          Length = 420

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/420 (78%), Positives = 356/420 (84%)

Query: 1   MSNRGXXXXXXXXXXXXXXXXDLYHLRDTFFPPNPHDRISSLQHHSDLALNLLDSIPPEQ 60
           M N G                +LY LRDT+FP NP DR S+LQ HSDL L LLDS+PPE+
Sbjct: 1   MENSGSGEEEALLVKAAKSTDELYLLRDTYFPQNPDDRTSNLQQHSDLILTLLDSVPPEE 60

Query: 61  RKSPMQRATFEYLRGKVLDVFPDYRKDAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLP 120
           RKSP QRA FEYLRGKVLDVFP+Y+K+AEDHLSKAVKLNPSLADAWLCLGNCIWKKGDL 
Sbjct: 61  RKSPTQRAIFEYLRGKVLDVFPEYKKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLS 120

Query: 121 AAKNCLSLALNKGPNKKILCQLSMLKRKMSQGAENQSELVEESIEHAKEAITLDVKDGNS 180
           AAKNCL+LALNKGPNKKILCQLSMLKR MSQ A+NQ+ELV+ESI+HAKEAI LDVKDGNS
Sbjct: 121 AAKNCLNLALNKGPNKKILCQLSMLKRSMSQSADNQAELVDESIQHAKEAIALDVKDGNS 180

Query: 181 WYNLGNAYLTSFFVTGAWDHAKLSHSLKAYQNAEKDERMKSNPDLYFNYATVNKYLENYE 240
           WYNLGNAY+TSFFVTG WDH +LSHSLKAYQNAEKDE +KSNPD YFN A  NKYLENYE
Sbjct: 181 WYNLGNAYVTSFFVTGGWDHTRLSHSLKAYQNAEKDEGIKSNPDFYFNSAIANKYLENYE 240

Query: 241 RALSGFEAAALKDPGLNAAEEAQKIVNLLDKVDNLLRGHVRAKRIXXXXXXXXXXXXXXX 300
           RALSGFEAAA KDPGLNAA+E QKIVNLLD VDNLLR HVRAKRI               
Sbjct: 241 RALSGFEAAASKDPGLNAADEVQKIVNLLDNVDNLLRVHVRAKRIAALAASLAAVNLKLP 300

Query: 301 HKGVTIDLLSEGLNRALAVEGKVLFFVRSESVAPLYYVLCDSNQTCFVLSVYGVRFDVIK 360
           ++ VT+DLLSEGLNR LAV+GKVLFF+RSE VAPLYY+LCDSNQTCFVLS+YGVR DVIK
Sbjct: 301 YRTVTMDLLSEGLNRTLAVDGKVLFFIRSEGVAPLYYLLCDSNQTCFVLSIYGVRQDVIK 360

Query: 361 EGDQLTLLDPLFRDVDLSWKEKHYQFKSIRLDFYEQVLVNGKALTPQQAIRSSILAQHKP 420
            GDQLTLLDP FRDVD+SWKEKHYQFKSIRLDFYEQVLVNGKALTPQQAIR+SI AQHKP
Sbjct: 361 GGDQLTLLDPCFRDVDVSWKEKHYQFKSIRLDFYEQVLVNGKALTPQQAIRTSIYAQHKP 420