Miyakogusa Predicted Gene
- Lj5g3v2166260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2166260.1 tr|E5RKG9|E5RKG9_SOYBN Protein disulfide
isomerase family OS=Glycine max GN=Gmpdiq-1b PE=2
SV=1,86.11,0,seg,NULL; FAD-dependent thiol oxidase,Erv1/Alr;
Thioredoxin-like,Thioredoxin-like fold; Evr1_Alr,Erv,CUFF.56804.1
(511 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g108590.2 | sulfhydryl oxidase | HC | chr1:49071306-490660... 863 0.0
Medtr1g108590.1 | sulfhydryl oxidase | HC | chr1:49071306-490660... 853 0.0
Medtr1g108520.1 | Erv1/Alr family protein | LC | chr1:49050786-4... 94 3e-19
Medtr0121s0090.1 | sulfhydryl oxidase | LC | scaffold0121:38255-... 94 3e-19
Medtr7g112040.1 | protein disulfide isomerase-like protein | HC ... 56 9e-08
Medtr1g087520.1 | protein disulfide isomerase-like protein | HC ... 54 3e-07
Medtr4g080800.1 | protein disulfide-isomerase 5-3 | HC | chr4:31... 52 2e-06
Medtr3g088220.1 | protein disulfide isomerase | HC | chr3:400167... 51 2e-06
>Medtr1g108590.2 | sulfhydryl oxidase | HC | chr1:49071306-49066063
| 20130731
Length = 512
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/486 (84%), Positives = 436/486 (89%), Gaps = 2/486 (0%)
Query: 26 FSSRSILRVVNDNDESGGGDHPDYAVDLNATNFDAVLKDTPATFAVVEFFANWCPACRNY 85
F RSILR V+DND++G DH DYAV+LNATNFDAVLKDTPATFAVVEFFANWCPACRNY
Sbjct: 27 FPGRSILREVHDNDQTGTTDH-DYAVELNATNFDAVLKDTPATFAVVEFFANWCPACRNY 85
Query: 86 KPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVGHYPMLFWGPPPKFVGA 145
KPHYEKVA+LFNGPDAVHPGIIL+TRVDCASKIN KLCDKFSVGHYPMLFWGPPPKFVG
Sbjct: 86 KPHYEKVAKLFNGPDAVHPGIILLTRVDCASKINIKLCDKFSVGHYPMLFWGPPPKFVGG 145
Query: 146 GWEPKQDKSXXXXXXXXXXXXXLLSWINKETGSSFGLDDQKFQNEHLSSNISDPEQIARA 205
WEPKQ+KS LL+WINK+ SSFGLDDQKFQNEHLSSN+SDPEQIARA
Sbjct: 146 SWEPKQEKSDIHVIDDARTADRLLNWINKQMSSSFGLDDQKFQNEHLSSNVSDPEQIARA 205
Query: 206 IYDVEEATSKAFDIILENKMIKPGTRASVIKFLQLLVAHHPSRRCRKGAAEFLVSFDDLY 265
IYDVEEATS AFDIILENKMIKP TRAS++KFLQ+L AHHPSRRCRKGA + LVSF DLY
Sbjct: 206 IYDVEEATSLAFDIILENKMIKPETRASLVKFLQVLTAHHPSRRCRKGAGDLLVSFADLY 265
Query: 266 PTDFWSTVKQEDDKNSVGNLQICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRV 325
PTDFWS+ KQEDDK+SV N QICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVR+
Sbjct: 266 PTDFWSSHKQEDDKSSVKNFQICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRI 325
Query: 326 EDGESQFTFNAICDFVHNFFVCEECRQHFYNMCSSVSSPFTKARDLALWLWSSHNKVNER 385
EDGESQFTFNAICDFVHNFFVCEECRQHFY+MCSSVS+PF KARD LWLWSSHNKVNER
Sbjct: 326 EDGESQFTFNAICDFVHNFFVCEECRQHFYDMCSSVSTPFNKARDFVLWLWSSHNKVNER 385
Query: 386 LKKEEASLGTDDPKFPKTIWPSKQLCSSCYISHDQKNNKIEWNQDEVFKLLTNYYGNTLA 445
L KEEASLGT DPKFPKTIWP+KQLC SCY+ HDQK+NKIEWNQDEV+K L NYY TL
Sbjct: 386 LSKEEASLGTGDPKFPKTIWPTKQLCPSCYLGHDQKSNKIEWNQDEVYKALKNYYEKTLV 445
Query: 446 SLYKNKSIAGKDGTEG-AVEDLIVATNAIVVPVGAALAIAVASCAFGALACYWRSQQKSR 504
SLYK K IAG DGT+G A+EDLIV TNA+VVPVGAALAIAVASCAFGALACYWRSQQKSR
Sbjct: 446 SLYKEKDIAGNDGTKGAALEDLIVGTNAVVVPVGAALAIAVASCAFGALACYWRSQQKSR 505
Query: 505 KPRRTW 510
KP+RTW
Sbjct: 506 KPKRTW 511
>Medtr1g108590.1 | sulfhydryl oxidase | HC | chr1:49071306-49066063
| 20130731
Length = 517
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/481 (84%), Positives = 431/481 (89%), Gaps = 2/481 (0%)
Query: 26 FSSRSILRVVNDNDESGGGDHPDYAVDLNATNFDAVLKDTPATFAVVEFFANWCPACRNY 85
F RSILR V+DND++G DH DYAV+LNATNFDAVLKDTPATFAVVEFFANWCPACRNY
Sbjct: 27 FPGRSILREVHDNDQTGTTDH-DYAVELNATNFDAVLKDTPATFAVVEFFANWCPACRNY 85
Query: 86 KPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVGHYPMLFWGPPPKFVGA 145
KPHYEKVA+LFNGPDAVHPGIIL+TRVDCASKIN KLCDKFSVGHYPMLFWGPPPKFVG
Sbjct: 86 KPHYEKVAKLFNGPDAVHPGIILLTRVDCASKINIKLCDKFSVGHYPMLFWGPPPKFVGG 145
Query: 146 GWEPKQDKSXXXXXXXXXXXXXLLSWINKETGSSFGLDDQKFQNEHLSSNISDPEQIARA 205
WEPKQ+KS LL+WINK+ SSFGLDDQKFQNEHLSSN+SDPEQIARA
Sbjct: 146 SWEPKQEKSDIHVIDDARTADRLLNWINKQMSSSFGLDDQKFQNEHLSSNVSDPEQIARA 205
Query: 206 IYDVEEATSKAFDIILENKMIKPGTRASVIKFLQLLVAHHPSRRCRKGAAEFLVSFDDLY 265
IYDVEEATS AFDIILENKMIKP TRAS++KFLQ+L AHHPSRRCRKGA + LVSF DLY
Sbjct: 206 IYDVEEATSLAFDIILENKMIKPETRASLVKFLQVLTAHHPSRRCRKGAGDLLVSFADLY 265
Query: 266 PTDFWSTVKQEDDKNSVGNLQICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRV 325
PTDFWS+ KQEDDK+SV N QICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVR+
Sbjct: 266 PTDFWSSHKQEDDKSSVKNFQICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRI 325
Query: 326 EDGESQFTFNAICDFVHNFFVCEECRQHFYNMCSSVSSPFTKARDLALWLWSSHNKVNER 385
EDGESQFTFNAICDFVHNFFVCEECRQHFY+MCSSVS+PF KARD LWLWSSHNKVNER
Sbjct: 326 EDGESQFTFNAICDFVHNFFVCEECRQHFYDMCSSVSTPFNKARDFVLWLWSSHNKVNER 385
Query: 386 LKKEEASLGTDDPKFPKTIWPSKQLCSSCYISHDQKNNKIEWNQDEVFKLLTNYYGNTLA 445
L KEEASLGT DPKFPKTIWP+KQLC SCY+ HDQK+NKIEWNQDEV+K L NYY TL
Sbjct: 386 LSKEEASLGTGDPKFPKTIWPTKQLCPSCYLGHDQKSNKIEWNQDEVYKALKNYYEKTLV 445
Query: 446 SLYKNKSIAGKDGTEG-AVEDLIVATNAIVVPVGAALAIAVASCAFGALACYWRSQQKSR 504
SLYK K IAG DGT+G A+EDLIV TNA+VVPVGAALAIAVASCAFGALACYWRSQQKSR
Sbjct: 446 SLYKEKDIAGNDGTKGAALEDLIVGTNAVVVPVGAALAIAVASCAFGALACYWRSQQKSR 505
Query: 505 K 505
K
Sbjct: 506 K 506
>Medtr1g108520.1 | Erv1/Alr family protein | LC |
chr1:49050786-49049992 | 20130731
Length = 140
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 3/68 (4%)
Query: 349 ECRQHFYNMCSSVSSPFTKARDLALWLWSSHNKVNERLKKEEASLGTDDPKFPKTIWPSK 408
+CR H + SVS+PF KA D LWLWSSHNK+N+RL KE+A LGT D KFP +IWP+K
Sbjct: 13 QCRVH---IVFSVSTPFNKACDFTLWLWSSHNKLNKRLSKEKAFLGTGDLKFPNSIWPTK 69
Query: 409 QLCSSCYI 416
QLCSSCY+
Sbjct: 70 QLCSSCYL 77
>Medtr0121s0090.1 | sulfhydryl oxidase | LC |
scaffold0121:38255-37946 | 20130731
Length = 76
Score = 94.0 bits (232), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
Query: 432 VFKLLTNYYGNTLASLYKNKSIAGKDGTEGAV-EDLIVATNAIVVPVGAALAIAVASCAF 490
V+K+ N Y TL S YK + G +GT+GA EDL+VATNA VVPVGAA SCAF
Sbjct: 2 VYKVQKNNYTKTLVSFYKERGTIGNEGTKGAAFEDLMVATNAAVVPVGAA------SCAF 55
Query: 491 GALACYWRSQQKSRKPRRTW 510
ACYWRSQQ +RKPRRTW
Sbjct: 56 RVFACYWRSQQNNRKPRRTW 75
>Medtr7g112040.1 | protein disulfide isomerase-like protein | HC |
chr7:46064601-46061511 | 20130731
Length = 359
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 70 AVVEFFANWCPACRNYKPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVG 129
A+VEF+A WC C+ P YEK+A F + IL+ +VDC + +C K+ V
Sbjct: 44 ALVEFYAPWCGHCKKLAPEYEKLATSFRKTNT-----ILIGKVDCDE--HKSVCTKYGVS 96
Query: 130 HYPMLFWGP-----PPKFVGA 145
YP + W P P KF GA
Sbjct: 97 GYPTIKWFPKGSLNPKKFEGA 117
>Medtr1g087520.1 | protein disulfide isomerase-like protein | HC |
chr1:39203231-39207376 | 20130731
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 70 AVVEFFANWCPACRNYKPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVG 129
A+VEF+A WC C+ P YEK+ F +V L+ +VDC + +C K+ V
Sbjct: 49 ALVEFYAPWCGHCKKLAPEYEKLGNSFKKAKSV-----LIAKVDCDE--HKGVCSKYGVS 101
Query: 130 HYPMLFWGP-----PPKFVG 144
YP + W P P KF G
Sbjct: 102 GYPTIQWFPKGSLEPKKFEG 121
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 23 NSPFSSRSILRVVNDNDESGGGD-----HPDYAVDLNATNFDAVLKDTPATFAVVEFFAN 77
P ++ S+ VN GG + P + V L F+ V+ D +VEF+A
Sbjct: 120 EGPRTAESLAEFVNTE---GGTNVKIATAPSHVVVLTPETFNEVVLDETKD-VLVEFYAP 175
Query: 78 WCPACRNYKPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVGHYPMLFWG 137
WC C++ P YEKVA +F D V ++ +D A K L +K+ V +P L +
Sbjct: 176 WCGHCKSLAPIYEKVAAVFKSEDDV-----VIANLD-ADKYRD-LAEKYDVSGFPTLKFF 228
Query: 138 PPPKFVGAGWEPKQDKSXXXXXXXXXXXXXLLSWINKETGSSFGLDDQKFQNEHLSSNIS 197
P G + +D +++IN+++G+S D K Q + +
Sbjct: 229 PKGNKAGEDYGGGRD------------LDDFVAFINEKSGTS---RDAKGQLTSEAGIVE 273
Query: 198 DPEQIARAIYDVEEATSKAFDIILENKMIKPGTRAS 233
D +++ + + KA +E ++ K AS
Sbjct: 274 DLDELVKEFVAANDEEKKAVFARIEEEVEKLKGSAS 309
>Medtr4g080800.1 | protein disulfide-isomerase 5-3 | HC |
chr4:31384571-31393311 | 20130731
Length = 477
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 24 SPFSSRSILRVVNDNDESGGGDHPDYAVDLNATNFDAVLKDTPATFAVVEFFANWCPACR 83
S F S +I V +DE D + ++ L + +FD ++ P T VV F+A WC C+
Sbjct: 118 SEFHSGTIANAVKHDDEVDT-DFVEGSLPLTSQHFDKYVQLFPIT--VVNFYAPWCSWCQ 174
Query: 84 NYKPHYEKVARLFNGP-DAVHPGIILMTRVDCASKINTKLCDKFSVGHYPML 134
KP +EK A++ D G IL+ +VDC + LC + + YP +
Sbjct: 175 RLKPSWEKAAKIMRERYDPEMDGRILLAKVDCTQE--GDLCRRHHIQGYPSI 224
>Medtr3g088220.1 | protein disulfide isomerase | HC |
chr3:40016736-40020768 | 20130731
Length = 513
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 40 ESGGGDHPDYAVDLNATNFDAVLKDTPATFAVVEFFANWCPACRNYKPHYEKVARLFNGP 99
E D ++ + L+ TNF +K F VVEF+A WC C+ P YEK A +
Sbjct: 25 EESSTDAKEFVLTLDNTNFHDTVKKH--DFIVVEFYAPWCGHCKKLAPEYEKAASIL--- 79
Query: 100 DAVHPGIILMTRVDCASKINTKLCDKFSVGHYPML 134
+ H +++ +VD + N L + V +P +
Sbjct: 80 -STHEPPVVLAKVDANEEHNKDLASENDVKGFPTI 113