Miyakogusa Predicted Gene
- Lj5g3v2166220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2166220.1 tr|G7IAT6|G7IAT6_MEDTR E3 ubiquitin-protein
ligase MARCH2 OS=Medicago truncatula GN=MTR_1g108490
PE=,80.67,0,ZF_RING_CH,Zinc finger, RING-CH-type; RING/U-box,NULL;
seg,NULL; no description,Zinc finger, RING/FY,CUFF.56786.1
(269 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g108490.1 | RING/FYVE/PHD zinc finger protein | HC | chr1:... 439 e-123
Medtr1g108490.2 | RING/FYVE/PHD zinc finger protein | HC | chr1:... 346 1e-95
Medtr7g082950.1 | RING/FYVE/PHD zinc finger protein | HC | chr7:... 209 3e-54
Medtr7g082950.2 | RING/FYVE/PHD zinc finger protein | HC | chr7:... 175 4e-44
Medtr5g040650.1 | RING/FYVE/PHD zinc finger protein | HC | chr5:... 160 8e-40
Medtr5g040650.2 | RING/FYVE/PHD zinc finger protein | HC | chr5:... 159 2e-39
Medtr8g467220.1 | RING/FYVE/PHD zinc finger protein | HC | chr8:... 157 9e-39
Medtr8g467220.2 | RING/FYVE/PHD zinc finger protein | HC | chr8:... 157 9e-39
Medtr7g109460.1 | RING/FYVE/PHD zinc finger protein | HC | chr7:... 155 5e-38
Medtr7g109460.2 | RING/FYVE/PHD zinc finger protein | HC | chr7:... 136 2e-32
Medtr1g087150.1 | RING/FYVE/PHD zinc finger protein | HC | chr1:... 128 5e-30
Medtr1g087150.2 | RING/FYVE/PHD zinc finger protein | HC | chr1:... 123 2e-28
Medtr7g010610.1 | RING-variant domain protein | LC | chr7:264569... 86 4e-17
Medtr4g085550.1 | RING/U-box protein | HC | chr4:33432542-334251... 59 5e-09
Medtr4g085550.2 | RING/U-box protein | HC | chr4:33432535-334254... 59 5e-09
Medtr2g020520.4 | zinc finger protein | HC | chr2:6841935-683628... 55 1e-07
Medtr2g020520.1 | zinc finger protein | HC | chr2:6842371-683628... 54 1e-07
Medtr2g020520.2 | zinc finger protein | HC | chr2:6842446-683628... 54 1e-07
Medtr2g020520.3 | zinc finger protein | HC | chr2:6842068-683628... 54 1e-07
Medtr1g064710.1 | RING/U-box protein | HC | chr1:28480942-284866... 49 5e-06
Medtr1g064710.4 | RING/U-box protein | HC | chr1:28480942-284866... 49 5e-06
Medtr1g064710.7 | RING/U-box protein | HC | chr1:28480942-284866... 49 5e-06
Medtr7g065920.1 | RING/FYVE/PHD zinc finger protein | HC | chr7:... 49 5e-06
Medtr1g064710.3 | RING/U-box protein | HC | chr1:28480942-284866... 49 7e-06
Medtr1g064710.2 | RING/U-box protein | HC | chr1:28480942-284866... 49 7e-06
Medtr1g064710.5 | RING/U-box protein | HC | chr1:28480942-284866... 49 7e-06
Medtr1g064710.6 | RING/U-box protein | HC | chr1:28480942-284866... 49 7e-06
>Medtr1g108490.1 | RING/FYVE/PHD zinc finger protein | HC |
chr1:49037595-49041175 | 20130731
Length = 266
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/269 (76%), Positives = 228/269 (84%), Gaps = 3/269 (1%)
Query: 1 MGDHFDLLVDRXXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKMGPGDIKYPGKMV 60
MGDHFDLLVDR R R+MQAA S V VD SL+KMG IK GK+
Sbjct: 1 MGDHFDLLVDRLLTESTLEAAIESRNRAMQAASSEVTSAAVDHSLLKMG---IKCSGKLA 57
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPP 120
ECRICHDDD+DSNME PCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKP YTAPPP
Sbjct: 58 ECRICHDDDDDSNMETPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPDYTAPPP 117
Query: 121 LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSVA 180
LFQFGRIPMSFRGNWEISRRDLNS HLVSMVPTD NL+NSNYDQ S S+SGSL+CCRS A
Sbjct: 118 LFQFGRIPMSFRGNWEISRRDLNSTHLVSMVPTDQNLINSNYDQYSTSSSGSLICCRSAA 177
Query: 181 VIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMVRAVTLIQRHRRQHR 240
VIFMVLLILRH LPL+I+GNK+YSFPLFM++ FR+AG+V+PIYFMVRA+ LIQRHRRQHR
Sbjct: 178 VIFMVLLILRHTLPLIISGNKDYSFPLFMVLLFRSAGIVVPIYFMVRAMALIQRHRRQHR 237
Query: 241 ELPNALVSLSDNEIEQGALQHQPHVIHLL 269
E P+ALVS SD+EIE+ ALQ QPH++HL+
Sbjct: 238 EHPSALVSSSDDEIEEAALQSQPHIMHLV 266
>Medtr1g108490.2 | RING/FYVE/PHD zinc finger protein | HC |
chr1:49037595-49040264 | 20130731
Length = 210
Score = 346 bits (888), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/210 (78%), Positives = 175/210 (83%), Gaps = 3/210 (1%)
Query: 1 MGDHFDLLVDRXXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKMGPGDIKYPGKMV 60
MGDHFDLLVDR R R+MQAA S V VD SL+KMG IK GK+
Sbjct: 1 MGDHFDLLVDRLLTESTLEAAIESRNRAMQAASSEVTSAAVDHSLLKMG---IKCSGKLA 57
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPP 120
ECRICHDDD+DSNME PCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKP YTAPPP
Sbjct: 58 ECRICHDDDDDSNMETPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPDYTAPPP 117
Query: 121 LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSVA 180
LFQFGRIPMSFRGNWEISRRDLNS HLVSMVPTD NL+NSNYDQ S S+SGSL+CCRS A
Sbjct: 118 LFQFGRIPMSFRGNWEISRRDLNSTHLVSMVPTDQNLINSNYDQYSTSSSGSLICCRSAA 177
Query: 181 VIFMVLLILRHALPLVITGNKEYSFPLFML 210
VIFMVLLILRH LPL+I+GNK+YSFPLFM+
Sbjct: 178 VIFMVLLILRHTLPLIISGNKDYSFPLFMV 207
>Medtr7g082950.1 | RING/FYVE/PHD zinc finger protein | HC |
chr7:31833020-31830329 | 20130731
Length = 214
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 145/213 (68%), Gaps = 13/213 (6%)
Query: 52 DIKYPGKMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPF 111
D P V+CRICHD+DED NM+ PCSCCG+LKYAHR C+QRWCNEKGDTTCEIC Q
Sbjct: 6 DSYSPNTSVQCRICHDEDEDLNMDTPCSCCGTLKYAHRICVQRWCNEKGDTTCEICQQQL 65
Query: 112 KPGYTAPP--PLFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPST 169
K GYTAPP PLF++G GNWEI LN+ +++ PT+ L+ +++ +PST
Sbjct: 66 K-GYTAPPPAPLFRYG-------GNWEIPNIGLNNHRFIALFPTNHEFLDLDFEYSAPST 117
Query: 170 SGSLLCCRSVAVIFMVLLILRHALP--LVITGNKEYSFPLFMLVFFRTAGVVLPIYFMVR 227
SL+ R V VIF+VLL+LRH LP L++ G EYS +FML+ + G+++P+Y MV+
Sbjct: 118 R-SLMFFRIVTVIFVVLLVLRHTLPIILMLNGVGEYSLTVFMLLVWGIVGLIIPVYMMVK 176
Query: 228 AVTLIQRHRRQHRELPNALVSLSDNEIEQGALQ 260
A++ IQ + QH++ + + S +N++ Q L+
Sbjct: 177 ALSAIQVQQLQHQDHNSFVQSREENDMGQSQLR 209
>Medtr7g082950.2 | RING/FYVE/PHD zinc finger protein | HC |
chr7:31833020-31830324 | 20130731
Length = 161
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 113/163 (69%), Gaps = 13/163 (7%)
Query: 52 DIKYPGKMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPF 111
D P V+CRICHD+DED NM+ PCSCCG+LKYAHR C+QRWCNEKGDTTCEIC Q
Sbjct: 6 DSYSPNTSVQCRICHDEDEDLNMDTPCSCCGTLKYAHRICVQRWCNEKGDTTCEICQQQL 65
Query: 112 KPGYTAPP--PLFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPST 169
K GYTAPP PLF++G GNWEI LN+ +++ PT+ L+ +++ +PST
Sbjct: 66 K-GYTAPPPAPLFRYG-------GNWEIPNIGLNNHRFIALFPTNHEFLDLDFEYSAPST 117
Query: 170 SGSLLCCRSVAVIFMVLLILRHALP--LVITGNKEYSFPLFML 210
SL+ R V VIF+VLL+LRH LP L++ G EYS +FM+
Sbjct: 118 R-SLMFFRIVTVIFVVLLVLRHTLPIILMLNGVGEYSLTVFMV 159
>Medtr5g040650.1 | RING/FYVE/PHD zinc finger protein | HC |
chr5:17869053-17863995 | 20130731
Length = 290
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 120/195 (61%), Gaps = 5/195 (2%)
Query: 51 GDIKYP-GKMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
GD + P +MVECRIC ++D SN+E PC+C GSLKYAHR+C+Q WCNEKGD TCEICHQ
Sbjct: 58 GDEEEPLIQMVECRICQEEDSVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQ 117
Query: 110 PFKPGYTAPPPLFQFGRIPMSFRGNWEISRR--DLNSAHLVSMVPTDPNLLNSNYDQDSP 167
P++ GYTAPPP + G W +S DL L+++ + L++ YD+ +
Sbjct: 118 PYQSGYTAPPPRPVPEETTIEIGGGWTLSGSPLDLRDPRLLAIAEAERQFLDAEYDEYAA 177
Query: 168 STSGSLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFP-LFMLVFFRTAGVVLPIYFMV 226
S + CRS A+I M LL+LRHAL + + + F L R AG +LP Y M
Sbjct: 178 SNASGAAFCRSAALILMALLLLRHALSVTDGDSSDDDPSNFFSLFLLRAAGFLLPCYIMA 237
Query: 227 RAVTLIQRHRRQHRE 241
A++++QR RRQ +E
Sbjct: 238 WAISILQR-RRQRQE 251
>Medtr5g040650.2 | RING/FYVE/PHD zinc finger protein | HC |
chr5:17868904-17864467 | 20130731
Length = 257
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 51 GDIKYPG-KMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
GD + P +MVECRIC ++D SN+E PC+C GSLKYAHR+C+Q WCNEKGD TCEICHQ
Sbjct: 58 GDEEEPLIQMVECRICQEEDSVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQ 117
Query: 110 PFKPGYTAPPPLFQFGRIPMSFRGNWEISRR--DLNSAHLVSMVPTDPNLLNSNYDQDSP 167
P++ GYTAPPP + G W +S DL L+++ + L++ YD+ +
Sbjct: 118 PYQSGYTAPPPRPVPEETTIEIGGGWTLSGSPLDLRDPRLLAIAEAERQFLDAEYDEYAA 177
Query: 168 STSGSLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFP-LFMLVFFRTAGVVLPIYFMV 226
S + CRS A+I M LL+LRHAL + + + F L R AG +LP Y M
Sbjct: 178 SNASGAAFCRSAALILMALLLLRHALSVTDGDSSDDDPSNFFSLFLLRAAGFLLPCYIMA 237
Query: 227 RAVTLIQRHRRQH 239
A++++QR R++
Sbjct: 238 WAISILQRRRQRQ 250
>Medtr8g467220.1 | RING/FYVE/PHD zinc finger protein | HC |
chr8:24086270-24089602 | 20130731
Length = 285
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 119/207 (57%), Gaps = 12/207 (5%)
Query: 37 NDTKVDISLIKMGPGDIKYPGKMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWC 96
+D D L++M +M ECRIC ++D N+E PC+C GSLKYAHR+C+QRWC
Sbjct: 51 DDVGEDEPLLQM---------EMAECRICQEEDGIDNLENPCACSGSLKYAHRKCVQRWC 101
Query: 97 NEKGDTTCEICHQPFKPGYTAPPPLFQFGRIPMSFRGNWEISRR--DLNSAHLVSMVPTD 154
NEKGDTTCEICH+ ++P YTAPPP + G W +S DL L+++ +
Sbjct: 102 NEKGDTTCEICHKSYEPDYTAPPPRPHPEETTIDIGGGWTLSGTPLDLRDPRLLAIAEAE 161
Query: 155 PNLLNSNYDQDSPSTSGSLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFR 214
+ YD + S + CRS A+I M LL+LRHAL + ++ F L R
Sbjct: 162 RQFFEAEYDGYAASNANGAAFCRSAALILMALLLLRHALSVTDADAEDDPSMFFSLFLLR 221
Query: 215 TAGVVLPIYFMVRAVTLIQRHRRQHRE 241
AG +LP Y M A++++QR RRQ +E
Sbjct: 222 AAGFLLPCYIMAWAISILQR-RRQRQE 247
>Medtr8g467220.2 | RING/FYVE/PHD zinc finger protein | HC |
chr8:24086270-24089602 | 20130731
Length = 285
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 119/207 (57%), Gaps = 12/207 (5%)
Query: 37 NDTKVDISLIKMGPGDIKYPGKMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWC 96
+D D L++M +M ECRIC ++D N+E PC+C GSLKYAHR+C+QRWC
Sbjct: 51 DDVGEDEPLLQM---------EMAECRICQEEDGIDNLENPCACSGSLKYAHRKCVQRWC 101
Query: 97 NEKGDTTCEICHQPFKPGYTAPPPLFQFGRIPMSFRGNWEISRR--DLNSAHLVSMVPTD 154
NEKGDTTCEICH+ ++P YTAPPP + G W +S DL L+++ +
Sbjct: 102 NEKGDTTCEICHKSYEPDYTAPPPRPHPEETTIDIGGGWTLSGTPLDLRDPRLLAIAEAE 161
Query: 155 PNLLNSNYDQDSPSTSGSLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFR 214
+ YD + S + CRS A+I M LL+LRHAL + ++ F L R
Sbjct: 162 RQFFEAEYDGYAASNANGAAFCRSAALILMALLLLRHALSVTDADAEDDPSMFFSLFLLR 221
Query: 215 TAGVVLPIYFMVRAVTLIQRHRRQHRE 241
AG +LP Y M A++++QR RRQ +E
Sbjct: 222 AAGFLLPCYIMAWAISILQR-RRQRQE 247
>Medtr7g109460.1 | RING/FYVE/PHD zinc finger protein | HC |
chr7:44756309-44758632 | 20130731
Length = 219
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 120/192 (62%), Gaps = 10/192 (5%)
Query: 52 DIKYPGKMVECRICHDDDEDSN--MEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
D++ + CRICH+++ +S+ +EAPCSC G++K+AHR CIQRWCNEKG+TTCEIC Q
Sbjct: 10 DLRLLSGISRCRICHEEEFESSKALEAPCSCSGTVKFAHRDCIQRWCNEKGNTTCEICLQ 69
Query: 110 PFKPGYTAPPP-LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPS 168
++PGYTAPPP + MS RG E S + + + ++ S+Y + S +
Sbjct: 70 QYEPGYTAPPPKKSEINDEAMSIRGEQEAS-------NAIRESEVEGIVIESDYSECSST 122
Query: 169 TSGSLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMVRA 228
T+ + CRS+A+ F ++L++RH L + +G ++Y F L ++ + G+++P+Y + +
Sbjct: 123 TNRTAFHCRSLAIAFTLVLLVRHCLVVPTSGTEDYPFTLLTVIVLKACGIIIPMYIVTKT 182
Query: 229 VTLIQRHRRQHR 240
+ I R+++
Sbjct: 183 IGAILNSIRRYQ 194
>Medtr7g109460.2 | RING/FYVE/PHD zinc finger protein | HC |
chr7:44756309-44758364 | 20130731
Length = 167
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 103/162 (63%), Gaps = 10/162 (6%)
Query: 52 DIKYPGKMVECRICHDDDEDSN--MEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
D++ + CRICH+++ +S+ +EAPCSC G++K+AHR CIQRWCNEKG+TTCEIC Q
Sbjct: 10 DLRLLSGISRCRICHEEEFESSKALEAPCSCSGTVKFAHRDCIQRWCNEKGNTTCEICLQ 69
Query: 110 PFKPGYTAPPP-LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPS 168
++PGYTAPPP + MS RG E S + + + ++ S+Y + S +
Sbjct: 70 QYEPGYTAPPPKKSEINDEAMSIRGEQEAS-------NAIRESEVEGIVIESDYSECSST 122
Query: 169 TSGSLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFPLFML 210
T+ + CRS+A+ F ++L++RH L + +G ++Y F L +
Sbjct: 123 TNRTAFHCRSLAIAFTLVLLVRHCLVVPTSGTEDYPFTLLTV 164
>Medtr1g087150.1 | RING/FYVE/PHD zinc finger protein | HC |
chr1:39043957-39041564 | 20130731
Length = 234
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 132/223 (59%), Gaps = 15/223 (6%)
Query: 52 DIKYPGKMVECRICHDDDEDS--NMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
D+K CRICH+++ +S ++EAPC+C G++K+AHR CIQ WCNEKG+TTCEIC Q
Sbjct: 10 DLKSISGFSRCRICHEEEFESFKSLEAPCACSGTVKFAHRDCIQTWCNEKGNTTCEICLQ 69
Query: 110 PFKPGYTAPPP---LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDS 166
++PGYT PPP L + + R + EISRR+ + + + +NY Q +
Sbjct: 70 QYEPGYTTPPPKKSLKPEEAMTIGIRDSLEISRREEEELNRRIVGIVEGVTRQNNYSQCT 129
Query: 167 PSTSGSLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMV 226
+ S CCRS+A+ F ++L+LRH L+ G ++Y F + + R +G+++P+ ++
Sbjct: 130 YAADRSASCCRSLALAFTLILLLRHLFALLTNGMEDYPFTILTIFILRASGIIIPMCIII 189
Query: 227 RAVTL----IQRHRRQHRELPNALVSLSDNEIEQGALQHQPHV 265
R + IQRH Q+ E ++L+S D+E E G PH+
Sbjct: 190 RTMGAIHKSIQRHYHQYSE-DDSLMSDGDDE-ENGT----PHI 226
>Medtr1g087150.2 | RING/FYVE/PHD zinc finger protein | HC |
chr1:39043957-39041564 | 20130731
Length = 216
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 117/193 (60%), Gaps = 5/193 (2%)
Query: 52 DIKYPGKMVECRICHDDDEDS--NMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
D+K CRICH+++ +S ++EAPC+C G++K+AHR CIQ WCNEKG+TTCEIC Q
Sbjct: 10 DLKSISGFSRCRICHEEEFESFKSLEAPCACSGTVKFAHRDCIQTWCNEKGNTTCEICLQ 69
Query: 110 PFKPGYTAPPP---LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDS 166
++PGYT PPP L + + R + EISRR+ + + + +NY Q +
Sbjct: 70 QYEPGYTTPPPKKSLKPEEAMTIGIRDSLEISRREEEELNRRIVGIVEGVTRQNNYSQCT 129
Query: 167 PSTSGSLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMV 226
+ S CCRS+A+ F ++L+LRH L+ G ++Y F + + R +G+++P+ ++
Sbjct: 130 YAADRSASCCRSLALAFTLILLLRHLFALLTNGMEDYPFTILTIFILRASGIIIPMCIII 189
Query: 227 RAVTLIQRHRRQH 239
R + I + ++H
Sbjct: 190 RTMGAIHKSIQRH 202
>Medtr7g010610.1 | RING-variant domain protein | LC |
chr7:2645699-2643632 | 20130731
Length = 173
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 57 GKMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGY- 115
GKM ECR CH+++ +EAPC C GSLKYAHRRCI WCN K CEIC + F P +
Sbjct: 30 GKMGECRYCHEEEWIYRLEAPCRCDGSLKYAHRRCISHWCNVKRSIRCEICREVFSPNFA 89
Query: 116 -TAPPPL 121
T PPPL
Sbjct: 90 VTEPPPL 96
>Medtr4g085550.1 | RING/U-box protein | HC | chr4:33432542-33425198
| 20130731
Length = 1112
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 62 CRICHD-DDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQP--FKPGYTAP 118
CRIC + D D+ + PC+C GS+K+ H+ C+ +W N CE+C P F P Y
Sbjct: 69 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAEN 128
Query: 119 PP 120
P
Sbjct: 129 AP 130
>Medtr4g085550.2 | RING/U-box protein | HC | chr4:33432535-33425425
| 20130731
Length = 1111
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 62 CRICHD-DDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQP--FKPGYTAP 118
CRIC + D D+ + PC+C GS+K+ H+ C+ +W N CE+C P F P Y
Sbjct: 69 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAEN 128
Query: 119 PP 120
P
Sbjct: 129 AP 130
>Medtr2g020520.4 | zinc finger protein | HC | chr2:6841935-6836281 |
20130731
Length = 423
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 52 DIKYPGKMVECRICHDD-DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
D + P + CRIC D+ DE + + C C G L+ H C+ +W N KG CEIC +
Sbjct: 205 DEEIPEEAAVCRICLDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEICGK 263
>Medtr2g020520.1 | zinc finger protein | HC | chr2:6842371-6836281 |
20130731
Length = 424
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 52 DIKYPGKMVECRICHDD-DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEIC 107
D + P + CRIC D+ DE + + C C G L+ H C+ +W N KG CEIC
Sbjct: 206 DEEIPEEAAVCRICLDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEIC 262
>Medtr2g020520.2 | zinc finger protein | HC | chr2:6842446-6836281 |
20130731
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 52 DIKYPGKMVECRICHDD-DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEIC 107
D + P + CRIC D+ DE + + C C G L+ H C+ +W N KG CEIC
Sbjct: 97 DEEIPEEAAVCRICLDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEIC 153
>Medtr2g020520.3 | zinc finger protein | HC | chr2:6842068-6836281 |
20130731
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 52 DIKYPGKMVECRICHDD-DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEIC 107
D + P + CRIC D+ DE + + C C G L+ H C+ +W N KG CEIC
Sbjct: 97 DEEIPEEAAVCRICLDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEIC 153
>Medtr1g064710.1 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 504
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GDIKYPGKMVECRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH 108
G P + CRIC + + N + CSC G L AH+ C +W KG+ TC++C
Sbjct: 249 GGEDIPEEEAVCRICMAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCK 308
Query: 109 Q 109
Q
Sbjct: 309 Q 309
>Medtr1g064710.4 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 432
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GDIKYPGKMVECRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH 108
G P + CRIC + + N + CSC G L AH+ C +W KG+ TC++C
Sbjct: 249 GGEDIPEEEAVCRICMAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCK 308
Query: 109 Q 109
Q
Sbjct: 309 Q 309
>Medtr1g064710.7 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 396
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GDIKYPGKMVECRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH 108
G P + CRIC + + N + CSC G L AH+ C +W KG+ TC++C
Sbjct: 249 GGEDIPEEEAVCRICMAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCK 308
Query: 109 Q 109
Q
Sbjct: 309 Q 309
>Medtr7g065920.1 | RING/FYVE/PHD zinc finger protein | HC |
chr7:23950286-23946340 | 20130731
Length = 235
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 25 RKRSMQAACSVVNDTKVDISLIKMGPGDIKYPGKMVECRICHDDDEDSNMEAP------C 78
R+ S + CSV +V+I + ++ + +CRICH E + E+ C
Sbjct: 78 RRVSSVSDCSV----EVEIRIERVPENKVHLAKVEKDCRICHMGLESESHESGPPIELGC 133
Query: 79 SCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPPLFQ 123
SC L AH+ C + W KG+ TCEICH + Y+ L +
Sbjct: 134 SCKEDLAAAHKNCAEAWFKIKGNRTCEICHSIARNVYSPNEDLTE 178
>Medtr1g064710.3 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GDIKYPGKMVECRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH 108
G P + CRIC + + N + CSC G L AH+ C +W KG+ TC++C
Sbjct: 249 GGEDIPEEEAVCRICMAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCK 308
Query: 109 Q 109
Q
Sbjct: 309 Q 309
>Medtr1g064710.2 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GDIKYPGKMVECRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH 108
G P + CRIC + + N + CSC G L AH+ C +W KG+ TC++C
Sbjct: 249 GGEDIPEEEAVCRICMAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCK 308
Query: 109 Q 109
Q
Sbjct: 309 Q 309
>Medtr1g064710.5 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GDIKYPGKMVECRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH 108
G P + CRIC + + N + CSC G L AH+ C +W KG+ TC++C
Sbjct: 249 GGEDIPEEEAVCRICMAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCK 308
Query: 109 Q 109
Q
Sbjct: 309 Q 309
>Medtr1g064710.6 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GDIKYPGKMVECRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH 108
G P + CRIC + + N + CSC G L AH+ C +W KG+ TC++C
Sbjct: 249 GGEDIPEEEAVCRICMAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCK 308
Query: 109 Q 109
Q
Sbjct: 309 Q 309