Miyakogusa Predicted Gene

Lj5g3v2166210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2166210.1 Non Characterized Hit- tr|A5BK40|A5BK40_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.36,0.00000000000002,seg,NULL; FAS1 domain,FAS1 domain; Four
repeated domains in the Fasciclin I fam,FAS1 domain; no
desc,CUFF.56785.1
         (343 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g108470.1 | fasciclin-like arabinogalactan protein | HC | ...   424   e-119
Medtr5g044170.1 | fasciclin-like arabinogalactan protein | HC | ...   209   3e-54
Medtr4g084160.1 | fasciclin domain protein | HC | chr4:32804307-...   202   4e-52
Medtr2g089200.1 | fasciclin-arabinogalactan-like protein | HC | ...    55   1e-07
Medtr2g007870.1 | fasciclin domain protein | HC | chr2:1180291-1...    55   1e-07
Medtr8g091400.1 | fasciclin-like arabinogalactan protein | HC | ...    55   1e-07
Medtr8g092700.1 | transmembrane protein, putative | HC | chr8:38...    52   1e-06
Medtr8g092370.1 | transmembrane protein, putative | HC | chr8:38...    52   1e-06

>Medtr1g108470.1 | fasciclin-like arabinogalactan protein | HC |
           chr1:49029133-49028041 | 20130731
          Length = 340

 Score =  424 bits (1089), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/319 (66%), Positives = 242/319 (75%), Gaps = 4/319 (1%)

Query: 27  PRDAILDAADVLTDTGFVSMGLTLEIVAETLLEHSPSATVFAPSDSAFKKSGQPSLDLLR 86
           PR+ I DAAD+L D+GFVSM LTLEIVAE+LLE S SATVFAPSDSAFKKSGQPSLDLLR
Sbjct: 24  PRETIFDAADILLDSGFVSMSLTLEIVAESLLEQSHSATVFAPSDSAFKKSGQPSLDLLR 83

Query: 87  YHFAXXXXXXXXXXXXXAGSNIPTMLAGQSLTATTSPSDLIASFNNVKITSMPIYDDGFL 146
           +HF              AG+ +PTML GQSLT TTS SD + S NN+KI   PIYDDG L
Sbjct: 84  FHFVMLPLPQQSLRRLPAGAKLPTMLTGQSLTVTTSFSDRVTSVNNIKINGTPIYDDGVL 143

Query: 147 LVYGIERFFDPTFQYTGPNPKPNP--NSTCALKNSTAGSSDSFDQAVKTLSSGGYSAMAS 204
           LVYGI+RFFDP FQYTGP+ KPN   NS+C+  N T  SS SF+QAVKTL + GYS MAS
Sbjct: 144 LVYGIDRFFDPNFQYTGPSRKPNSYSNSSCSALNRTVNSSGSFEQAVKTLKTSGYSVMAS 203

Query: 205 FLGMQLSGVAEQSGITVFAPADETVLSRIGDFGDYPAFYRRHVVPCKLLWNDLVNIGDGT 264
           FLGMQLSG   Q+GITVFAP DE V++RIGDF DYP+F+RRHVVPCK LWNDLV+ GDGT
Sbjct: 204 FLGMQLSGNINQNGITVFAPTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWNDLVDFGDGT 263

Query: 265 ELPTFLEGFSINITRSSGILILNGVPVFFPDMVFNDKMVVHGLGDVLAALDNTHRXXXXX 324
           +LPTFLEGFSINITRS G+LILNGVPVFFPD+ FND++VVHG+ DVLA  +         
Sbjct: 264 QLPTFLEGFSINITRSGGVLILNGVPVFFPDVFFNDRLVVHGVTDVLA--NAVQDDTSAV 321

Query: 325 XXXXXXXXGEENLFVPDEF 343
                   G++NLF P EF
Sbjct: 322 VDPAVSSDGDQNLFDPGEF 340


>Medtr5g044170.1 | fasciclin-like arabinogalactan protein | HC |
           chr5:19419900-19418773 | 20130731
          Length = 375

 Score =  209 bits (532), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/304 (39%), Positives = 175/304 (57%), Gaps = 25/304 (8%)

Query: 27  PRDAILDAADVLTDTGFVSMGLTLEIVAETLL--EHSPSATVFAPSDSAFKKSGQPSLDL 84
           P   ILDAA++LT  G  +M L LE+ + +L+    S S T+FAP++ AF +  Q  L L
Sbjct: 28  PSSTILDAAEILTTAGHEAMALNLELASHSLIARRQSRSLTIFAPTNFAFSQIPQLPLSL 87

Query: 85  LRYHFAXXXXXXXXXXXXXAGSNIPTMLAGQSLTATTSPSDLIASFNNVKITSMPIYDDG 144
           LRY                 G+N+ T+L G SLT TT+ SD   S NNV +   P+ DDG
Sbjct: 88  LRYQLLPHAFSLHSLRSLPFGANVATLLPGHSLTVTTT-SDRKLSINNVTVNPTPLLDDG 146

Query: 145 FLLVYGIERFFDPTFQYTGPNPKPNPNSTCALKNSTAG-------------SSDSFDQAV 191
           +L+++  E FFDP FQ     P+P+  ++C      +G             S+  F +A 
Sbjct: 147 YLVIFQTESFFDPYFQL----PRPS-GASCFSSRKISGDGGFGSKRLITDSSTFPFKEAS 201

Query: 192 KTLSSGGYSAMASFLGMQLSGVAEQ-SGITVFAPADETVLSRIGDFGDYPAFYRRHVVPC 250
             L S G S MA+FL +Q  G+ E+   +TVFAP DE ++S +G+  +Y    RRH+VPC
Sbjct: 202 GVLRSRGCSVMAAFLDLQFLGLKERPDQLTVFAPIDEAMVSHVGNVTEYSDILRRHLVPC 261

Query: 251 KLLWNDLVNIGDGTELPTFLEGFSINITRSSG---ILILNGVPVFFPDMVFNDKMVVHGL 307
           K++WNDLV + +GT + T+   F++N+  S+G    L+ NGVPV FPD+  +D +VVHG+
Sbjct: 262 KIVWNDLVVLEEGTLIWTYQRDFTLNVKTSAGSDLFLLNNGVPVVFPDLYVSDWLVVHGI 321

Query: 308 GDVL 311
           GD+L
Sbjct: 322 GDIL 325


>Medtr4g084160.1 | fasciclin domain protein | HC |
           chr4:32804307-32803564 | 20130731
          Length = 247

 Score =  202 bits (514), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/233 (50%), Positives = 142/233 (60%), Gaps = 38/233 (16%)

Query: 27  PRDAILDAADVLTDTGFVSMGLTLEIVAETLLEHSPSATVFAPSDSAFKKSGQPSLDLLR 86
           PR  I +AAD+L  +GF SM LTLE+ AE+LLEHSPSAT+FAPSDSAFKKSGQPSLDLL 
Sbjct: 25  PRQTIFEAADILYYSGFDSMSLTLEL-AESLLEHSPSATIFAPSDSAFKKSGQPSLDLLL 83

Query: 87  YHFAXXXXXXXXXXXXXAGSNIPTMLAGQSLTATTSPSDLIASFNNVKITSMPIYDDGFL 146
           +HF              AG+ +PTML GQSLT TTS SD + S NN+KI   PIYD+G L
Sbjct: 84  FHFVILPLPQQSLRRLPAGTKLPTMLTGQSLTVTTSSSDRVTSVNNIKIIGSPIYDNGVL 143

Query: 147 LVYGIERFFDPTFQYTGPNPKPNPNSTCALKNSTAGSSDSFDQAVKTLSSGGYSAMASFL 206
            VYGI+RF DP+FQYTG             K  ++ S+ SF+QA++TL + GYS M    
Sbjct: 144 FVYGIDRFLDPSFQYTG-----------PNKKPSSNSNSSFEQALETLKTTGYSEM---- 188

Query: 207 GMQLSGVAEQSGITVFAPADETVLSRIGDFGDYPAFYRRHVVPCKLLWNDLVN 259
           GM L                      IGDF D+   +RR VVP K +WND+V 
Sbjct: 189 GMNL----------------------IGDFEDHHWLFRRDVVPYKFIWNDVVQ 219


>Medtr2g089200.1 | fasciclin-arabinogalactan-like protein | HC |
           chr2:37661727-37663004 | 20130731
          Length = 354

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 122/304 (40%), Gaps = 40/304 (13%)

Query: 33  DAADVLTDTGFVSMGLTLEIVAETLLEHSP-------SATVFAPSDSAFKKSGQPSL--- 82
           +A + L   GFV M          LL  SP       ++T FA  DSA K +  P     
Sbjct: 51  NATEALKKQGFVLMA--------DLLHRSPPFFLPPKNSTFFAIKDSAIKNTSLPLWFLK 102

Query: 83  DLLRYHFAXXXXXXXXXXXXXAGSNIPTMLAGQ--SLTATTSPSDLIASFNNVKITSMPI 140
            LL YH                G+   T+   +  SLT   +    +   N+V I++  +
Sbjct: 103 SLLMYHTFTTKLTMQQLLNKSQGTCETTLFRQKNASLTKVDTLQKTV-EINHVLISNPDM 161

Query: 141 YDDGFLLVYGIERFFDPTFQYT---GPNPKPNPNSTCALKNSTAGSSD-----SFDQAVK 192
           +      ++G+   F    +     G +   +P       NST    D      +++ V+
Sbjct: 162 FLGEEFNIHGVLGPFSSLQREVLQGGSDFIRSPTCPSFKTNSTYEVGDFKNFVEWNKVVQ 221

Query: 193 TLSSGGYSAMASFLGMQLSGVAEQSG------ITVFAPADETVLSRIGDFGDYPAFYRRH 246
            L S GYS+ ++ L   L G+ + S        T+FAP D  +L       D     R H
Sbjct: 222 LLGSKGYSSFSTALHSVLEGILKDSSSFGYGSATIFAPPDVNLLHYPSTLLDRAV--RIH 279

Query: 247 VVPCKLLWNDLVNIGDGTELPTFLEGFSINITRSSGIL---ILNGVPVFFPDMVFNDKMV 303
           ++P K  + +L ++   T L T      + I    G +   ++NG+ +  PDM  ++K V
Sbjct: 280 ILPQKFTYKELSSLPVRTLLKTLTPHDHLEIDGVLGFMEGVLINGIQIVKPDMFVSEKFV 339

Query: 304 VHGL 307
           VHG+
Sbjct: 340 VHGI 343


>Medtr2g007870.1 | fasciclin domain protein | HC |
           chr2:1180291-1179140 | 20130731
          Length = 354

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 187 FDQAVKTLSSGGY-----SAMASFLGMQL--SGVAEQSGITVFAPADETV--LSRIGDFG 237
           FD  + TL S GY     + + S L + L        +  T FAP D ++  L       
Sbjct: 29  FDSMLNTLRSRGYHLFCNAILTSDLRIDLLDPNSNATNSFTFFAPTDSSLFALDMTQTAS 88

Query: 238 DYPAFYRRHVVPCKLLWNDLVNIGDGTELPTFLEGFSINITRSSG---ILILNGVPVFFP 294
            Y    R H++P +L  ++L  + +G  LPT L    I+ TR SG   +  + GV V FP
Sbjct: 89  SYTDTLRYHIIPRRLTLSELRLLPNGYTLPTMLSTRRISFTRRSGSSSVTTVGGVEVAFP 148

Query: 295 DMVFNDKMVVHGLGDVL 311
            + +   + VHGL  +L
Sbjct: 149 GLFYGRHVTVHGLAGIL 165


>Medtr8g091400.1 | fasciclin-like arabinogalactan protein | HC |
           chr8:38122158-38120710 | 20130731
          Length = 448

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 32/272 (11%)

Query: 65  TVFAPSDSAFKKSGQPSL-DLLRYHFAXXXXXXXXXXXXXAGSNIPTMLAGQSLTAT--- 120
           T+FAPSD++ +     S+ +LLR H                G+ I T+  G+ +T T   
Sbjct: 95  TIFAPSDASLRTCFSCSVPNLLREHIVPGIFTIEYLRRLAFGTKIETLSPGRCVTVTSES 154

Query: 121 -----TSPSDLIASFNNVKITSMPIYDDGFLLVYGIERF------FDPTFQYTGPNPKP- 168
                TS S        V+IT   ++++G ++V+G++ F      F    +       P 
Sbjct: 155 IHQNNTSGSAPKVFIGGVEITQPDLFNNGMVVVHGLQGFASKLSPFSCDVERMSSLSFPF 214

Query: 169 NPNSTCALKNSTAGSSD-------SFDQAVKTLSSGGYSAMASFLGMQLSGVAEQSGITV 221
           +P+        T G++            A+  L + G+S ++  + ++ + +   + +T+
Sbjct: 215 HPDHRSGAHVHTPGATVLPAIMRLMLRDAMVRLRNNGFSILSLAMKVKYAELITLNNMTI 274

Query: 222 FAPADETVLSRIGDFGDYPAFYRRHVVPCKLL-WNDLVNIGDGTELPTFLEGFSINITRS 280
           FA  D ++ S       Y +  R H++P   L   DL  +  GT LPT   G  + IT S
Sbjct: 275 FAVDDLSIFS---GSQSYISNVRFHIIPNHYLSIADLEKLPVGTALPTLERGQPLLITTS 331

Query: 281 SG-----ILILNGVPVFFPDMVFNDKMVVHGL 307
            G      + +N V V   D++ N K+VVH +
Sbjct: 332 GGGVTSAPMRINYVRVKVADVIRNVKIVVHSV 363


>Medtr8g092700.1 | transmembrane protein, putative | HC |
           chr8:38792646-38794334 | 20130731
          Length = 447

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 38/276 (13%)

Query: 64  ATVFAPSDSAFKKSGQPSL-DLLRYHFAXXXXXXXXXXXXXAGSNIPTMLAGQSLTATTS 122
           +T+FAPSD++ +     S+ +LLR H                G+ I T+  G+ +T T  
Sbjct: 93  STIFAPSDASLRTCFSCSVPNLLREHIVPGLFTIEYLRTLPFGTKIETLSPGRCITVT-- 150

Query: 123 PSDLIAS-----------FNNVKITSMPIYDDGFLLVYGIERFFDPTFQYTGPNPKP--- 168
            SD I S              V+I    ++++G ++V+G++ F      ++    +    
Sbjct: 151 -SDSIHSNITTGGAPKVFIGGVEIAQPDLFNNGMVVVHGLQGFVSTLSPFSCDVERMTSL 209

Query: 169 ----NPNSTCALKNSTAGSSD-------SFDQAVKTLSSGGYSAMASFLGMQLSGVAEQS 217
               +P+   +    T G +            A+  L + G+S ++  + ++ + +   +
Sbjct: 210 SFPFHPDHRSSAHVHTHGVTVLPAIMRLMLRDAMLRLRNNGFSILSLAMKVKYAELITLN 269

Query: 218 GITVFAPADETVLSRIGDFGDYPAFYRRHVVPCKLL-WNDLVNIGDGTELPTFLEGFSIN 276
            +T+FA  D ++ S       Y +  R H++P   L   DL  +  GT LPT   G  + 
Sbjct: 270 NMTIFAVDDLSIFS---GSQSYISNVRFHIIPNYYLSIADLEKLPVGTALPTLERGQPLL 326

Query: 277 ITRSSG-----ILILNGVPVFFPDMVFNDKMVVHGL 307
           IT S G      + +N V V   D++ N K+VVH +
Sbjct: 327 ITTSGGGVTSAPMRINYVRVKVADVIRNVKIVVHSV 362


>Medtr8g092370.1 | transmembrane protein, putative | HC |
           chr8:38607863-38609551 | 20130731
          Length = 447

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 38/276 (13%)

Query: 64  ATVFAPSDSAFKKSGQPSL-DLLRYHFAXXXXXXXXXXXXXAGSNIPTMLAGQSLTATTS 122
           +T+FAPSD++ +     S+ +LLR H                G+ I T+  G+ +T T  
Sbjct: 93  STIFAPSDASLRTCFSCSVPNLLREHIVPGLFTIEYLRTLPFGTKIETLSPGRCITVT-- 150

Query: 123 PSDLIAS-----------FNNVKITSMPIYDDGFLLVYGIERFFDPTFQYTGPNPKP--- 168
            SD I S              V+I    ++++G ++V+G++ F      ++    +    
Sbjct: 151 -SDSIHSNITTGGAPKVFIGGVEIAQPDLFNNGMVVVHGLQGFVSTLSPFSCDVERMTSL 209

Query: 169 ----NPNSTCALKNSTAGSSD-------SFDQAVKTLSSGGYSAMASFLGMQLSGVAEQS 217
               +P+   +    T G +            A+  L + G+S ++  + ++ + +   +
Sbjct: 210 SFPFHPDHRSSAHVHTHGVTVLPAIMRLMLRDAMLRLRNNGFSILSLAMKVKYAELITLN 269

Query: 218 GITVFAPADETVLSRIGDFGDYPAFYRRHVVPCKLL-WNDLVNIGDGTELPTFLEGFSIN 276
            +T+FA  D ++ S       Y +  R H++P   L   DL  +  GT LPT   G  + 
Sbjct: 270 NMTIFAVDDLSIFS---GSQSYISNVRFHIIPNYYLSIADLEKLPVGTALPTLERGQPLL 326

Query: 277 ITRSSG-----ILILNGVPVFFPDMVFNDKMVVHGL 307
           IT S G      + +N V V   D++ N K+VVH +
Sbjct: 327 ITTSGGGVTSAPMRINYVRVKVADVIRNVKIVVHSV 362