Miyakogusa Predicted Gene
- Lj5g3v2166150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2166150.1 Non Characterized Hit- tr|I1NFU4|I1NFU4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,87.55,0,SUBFAMILY NOT
NAMED,NULL; RIBOSE-5-PHOSPHATE ISOMERASE,Ribose 5-phosphate isomerase,
type A; Rib_5P_,CUFF.56787.1
(262 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g108440.1 | ribose-5-phosphate isomerase A | HC | chr1:490... 458 e-129
Medtr7g114900.1 | ribose-5-phosphate isomerase A | HC | chr7:474... 326 1e-89
Medtr7g114900.2 | ribose-5-phosphate isomerase A | HC | chr7:474... 326 1e-89
Medtr2g032540.1 | ribose-5-phosphate isomerase A | HC | chr2:122... 114 7e-26
>Medtr1g108440.1 | ribose-5-phosphate isomerase A | HC |
chr1:49010907-49013898 | 20130731
Length = 268
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/268 (85%), Positives = 248/268 (92%), Gaps = 6/268 (2%)
Query: 1 MAIPYPHFISSEKAAMEAGLLAPSSIILT------QDDLKKIAAYKAVEYVESGMVLGLG 54
MAIP PHFISS KAAMEAGLL PSS + QDDLKKIAAYKAVEYVESGMVLGLG
Sbjct: 1 MAIPCPHFISSAKAAMEAGLLIPSSPSSSVSVILSQDDLKKIAAYKAVEYVESGMVLGLG 60
Query: 55 TGSTAKHAVARIGELLRQGKLTDIVGIPTSTMTHDQALSVGIPLSDLDSHPVVDLAIDGA 114
TGSTAKHAVARIGEL+RQGKL +I+GIPTST+TH+QA+S+GIPLSDLDSHPV+DLAIDGA
Sbjct: 61 TGSTAKHAVARIGELIRQGKLKNIIGIPTSTITHEQAVSLGIPLSDLDSHPVIDLAIDGA 120
Query: 115 DEVDPYLNLVKGRGGSLLREKMVEAACKKFVVIVDESKLVNYIGGSGLAMPVEVIQFCWK 174
DEVDPYLNLVKGRGGSLLREKMVE ACKKFV IVDESKLVNY+GGSGLAMPVEVI+FCWK
Sbjct: 121 DEVDPYLNLVKGRGGSLLREKMVEGACKKFVCIVDESKLVNYLGGSGLAMPVEVIRFCWK 180
Query: 175 FTASKLQSLFEESGCVAKLRTVGEKEEPFVTDNGNYIVDLYFKESIGDLKAASDSILQIA 234
FTA +LQ+LFEESGCVAKLRT GEK EP+VTDNGNYIVDLYFK+SIGDL+ ASD+IL IA
Sbjct: 181 FTAGRLQNLFEESGCVAKLRTSGEKGEPYVTDNGNYIVDLYFKKSIGDLRVASDAILNIA 240
Query: 235 GVVEHGMFLDMATTVIIAGELGLTVKNK 262
GVVEHGMFLDMATTVI+AGELGLTVK+K
Sbjct: 241 GVVEHGMFLDMATTVIVAGELGLTVKSK 268
>Medtr7g114900.1 | ribose-5-phosphate isomerase A | HC |
chr7:47437147-47436305 | 20130731
Length = 280
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/238 (68%), Positives = 196/238 (82%), Gaps = 1/238 (0%)
Query: 25 SIILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVARIGELLRQGKLTDIVGIPTS 84
+I LTQDDLKK+AA KAVEYV+SGMVLGLGTGSTA V+++GELL G+LT+I+G+PTS
Sbjct: 44 AITLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVSKLGELLNSGELTNIIGVPTS 103
Query: 85 TMTHDQALSVGIPLSDLDSHPVVDLAIDGADEVDPYLNLVKGRGGSLLREKMVEAACKKF 144
T +QA S+GIPLS LD +P +DLAIDGADEVDP+LNLVKGRGG+LLREKMVEAA KF
Sbjct: 104 KRTEEQARSLGIPLSVLDDNPRLDLAIDGADEVDPFLNLVKGRGGALLREKMVEAASDKF 163
Query: 145 VVIVDESKLVNYIGGSGLAMPVEVIQFCWKFTASKLQSLFEESGCVAKLRTVGEKEEPFV 204
VV+VD++KLV+ +GGSGLAMPVEV+QFCWK+ +LQ LF+E G AKLR V E +P+V
Sbjct: 164 VVVVDDTKLVSGLGGSGLAMPVEVVQFCWKYNLIRLQELFKEEGVDAKLR-VDESGKPYV 222
Query: 205 TDNGNYIVDLYFKESIGDLKAASDSILQIAGVVEHGMFLDMATTVIIAGELGLTVKNK 262
TDN NYIVDLYFK I D AA I + GVVEHG+FL+MAT+VIIAG+ G+ VK+K
Sbjct: 223 TDNSNYIVDLYFKTPIRDANAAGAEISSLEGVVEHGLFLNMATSVIIAGKTGVEVKDK 280
>Medtr7g114900.2 | ribose-5-phosphate isomerase A | HC |
chr7:47437147-47436305 | 20130731
Length = 280
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/238 (68%), Positives = 196/238 (82%), Gaps = 1/238 (0%)
Query: 25 SIILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVARIGELLRQGKLTDIVGIPTS 84
+I LTQDDLKK+AA KAVEYV+SGMVLGLGTGSTA V+++GELL G+LT+I+G+PTS
Sbjct: 44 AITLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVSKLGELLNSGELTNIIGVPTS 103
Query: 85 TMTHDQALSVGIPLSDLDSHPVVDLAIDGADEVDPYLNLVKGRGGSLLREKMVEAACKKF 144
T +QA S+GIPLS LD +P +DLAIDGADEVDP+LNLVKGRGG+LLREKMVEAA KF
Sbjct: 104 KRTEEQARSLGIPLSVLDDNPRLDLAIDGADEVDPFLNLVKGRGGALLREKMVEAASDKF 163
Query: 145 VVIVDESKLVNYIGGSGLAMPVEVIQFCWKFTASKLQSLFEESGCVAKLRTVGEKEEPFV 204
VV+VD++KLV+ +GGSGLAMPVEV+QFCWK+ +LQ LF+E G AKLR V E +P+V
Sbjct: 164 VVVVDDTKLVSGLGGSGLAMPVEVVQFCWKYNLIRLQELFKEEGVDAKLR-VDESGKPYV 222
Query: 205 TDNGNYIVDLYFKESIGDLKAASDSILQIAGVVEHGMFLDMATTVIIAGELGLTVKNK 262
TDN NYIVDLYFK I D AA I + GVVEHG+FL+MAT+VIIAG+ G+ VK+K
Sbjct: 223 TDNSNYIVDLYFKTPIRDANAAGAEISSLEGVVEHGLFLNMATSVIIAGKTGVEVKDK 280
>Medtr2g032540.1 | ribose-5-phosphate isomerase A | HC |
chr2:12237722-12242093 | 20130731
Length = 295
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 14/241 (5%)
Query: 33 LKKIAAYKAVEYVESGMVLGLGTGSTAKHAVARIGELLRQGKLTDIVGIPTSTMTHDQAL 92
L + A Y YV+SGMV+GLG+G + A+ +G LR G L D+VGIPTS + +A
Sbjct: 51 LLQAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRNGNLKDVVGIPTSVASASEAA 110
Query: 93 SVGIPLSDLDSHPVVDLAIDGADEVD--PYLNLVKGRG----GSLLREKMVEAACKKFVV 146
GIPL +D+A D AD V+ ++ ++ R S+++EK + K V
Sbjct: 111 KAGIPLDTYQDSSQIDIAFDDADGVEEGTFVAIIGRRKLQSEESIIQEKSILNNANKLVF 170
Query: 147 IVDESKLVNYIGGSGLAMPVEVIQFCWKFTASKLQSLFEESGCVAKLRTVGEK-----EE 201
I++E++ Y GG ++PV + W A ++ +F V + +G+ +
Sbjct: 171 IIEENQ---YKGGLEGSIPVLIQSLNWLAAAEEIDDMFLGDAEVWRRPAIGQAGPLGGDF 227
Query: 202 PFVTDNGNYIVDLYFKESIGDLKAASDSILQIAGVVEHGMFLDMATTVIIAGELGLTVKN 261
P VT G+ ++D+ F I L + + + GVV+HG+ TV+IA GL V +
Sbjct: 228 PLVTGEGHNVLDVIFTSPIPSLAEVAKILDNVDGVVDHGVISKTPCTVVIASPNGLNVLD 287
Query: 262 K 262
K
Sbjct: 288 K 288