Miyakogusa Predicted Gene
- Lj5g3v2152700.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2152700.3 Non Characterized Hit- tr|I3SCE2|I3SCE2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,42.2,5e-17,no
description,Nucleic acid-binding, OB-fold; DUF223,Domain of unknown
function DUF223; Nucleic acid,CUFF.57178.3
(294 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g059025.1 | animal RPA1 domain protein | LC | chr8:2054987... 90 3e-18
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 87 3e-17
Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 | 20... 82 8e-16
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 79 7e-15
Medtr6g039240.1 | animal RPA1 domain protein | LC | chr6:1418076... 76 3e-14
Medtr1g094230.1 | animal RPA1 domain protein | LC | chr1:4243647... 76 4e-14
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 75 6e-14
Medtr8g467450.1 | animal RPA1 domain protein | LC | chr8:2424111... 75 7e-14
Medtr8g036090.1 | animal RPA1 domain protein | HC | chr8:1327908... 75 8e-14
Medtr4g471610.1 | animal RPA1 domain protein | HC | chr4:2707183... 75 8e-14
Medtr3g078440.1 | animal RPA1 domain protein | HC | chr3:3535014... 75 8e-14
Medtr7g089660.1 | animal RPA1 domain protein | LC | chr7:3511416... 75 1e-13
Medtr8g088810.1 | DUF223 domain protein | LC | chr8:36895897-368... 74 1e-13
Medtr8g463820.1 | animal RPA1 domain protein | LC | chr8:2251463... 74 1e-13
Medtr6g051890.1 | replication factor-A carboxy-terminal domain p... 74 1e-13
Medtr3g095950.1 | animal RPA1 domain protein | HC | chr3:4384560... 74 2e-13
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 74 2e-13
Medtr3g116750.1 | animal RPA1 domain protein | HC | chr3:5461096... 73 3e-13
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 73 3e-13
Medtr8g096680.1 | animal RPA1 domain protein | HC | chr8:4055821... 73 3e-13
Medtr1g036740.1 | animal RPA1 domain protein | HC | chr1:1349734... 73 3e-13
Medtr1788s0010.1 | animal RPA1 domain protein | LC | scaffold178... 72 9e-13
Medtr8g062060.1 | DUF223 domain protein | LC | chr8:25911934-259... 71 1e-12
Medtr7g093810.1 | animal RPA1 domain protein | HC | chr7:3731542... 71 1e-12
Medtr2g032570.1 | animal RPA1 domain protein | LC | chr2:1225599... 71 2e-12
Medtr3g044760.1 | DUF223 domain protein | LC | chr3:14435139-144... 70 2e-12
Medtr3g056240.1 | DUF223 domain protein | HC | chr3:22396065-223... 70 3e-12
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 69 4e-12
Medtr5g055160.1 | animal RPA1 domain protein | LC | chr5:2272064... 69 6e-12
Medtr0032s0020.1 | PIF1-like helicase | LC | scaffold0032:18195-... 69 7e-12
Medtr2g054710.1 | animal RPA1 domain protein | LC | chr2:2336383... 67 2e-11
Medtr8g479260.1 | replication factor-A carboxy-terminal domain p... 66 3e-11
Medtr2g008650.1 | replication factor-A carboxy-terminal domain p... 66 4e-11
Medtr6g069230.1 | animal RPA1 domain protein | LC | chr6:2491560... 65 6e-11
Medtr7g117425.1 | animal RPA1 domain protein | LC | chr7:4855438... 65 1e-10
Medtr5g085220.1 | animal RPA1 domain protein | LC | chr5:3678902... 64 1e-10
Medtr6g465570.1 | animal RPA1 domain protein | LC | chr6:2333006... 61 2e-09
Medtr4g028320.1 | animal RPA1 domain protein | LC | chr4:9767872... 60 2e-09
Medtr8g469510.1 | PIF1 DNA helicase/replication A1-like protein,... 60 3e-09
Medtr7g051400.1 | replication factor-A carboxy-terminal domain p... 59 4e-09
Medtr5g056060.1 | transmembrane protein, putative | HC | chr5:23... 59 4e-09
Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268... 59 6e-09
Medtr5g068430.1 | DUF223 domain protein | LC | chr5:28968884-289... 59 8e-09
Medtr7g104000.1 | animal RPA1 domain protein | HC | chr7:4204740... 58 1e-08
Medtr1g105785.1 | replication factor-A carboxy-terminal domain p... 58 1e-08
Medtr5g053590.1 | DUF223 domain protein | LC | chr5:22080013-220... 57 2e-08
Medtr2g058350.1 | DUF223 domain protein | LC | chr2:24115610-241... 57 2e-08
Medtr2g062200.1 | DUF223 domain protein | LC | chr2:26248587-262... 57 2e-08
Medtr1g085690.1 | DUF223 domain protein | HC | chr1:38294818-382... 57 2e-08
Medtr1g091180.1 | animal RPA1 domain protein | LC | chr1:4140287... 56 3e-08
Medtr5g070620.1 | hypothetical protein | HC | chr5:29909066-2990... 56 5e-08
Medtr2g450060.1 | replication factor-A carboxy-terminal domain p... 55 1e-07
Medtr3g032190.1 | DUF223 domain protein | LC | chr3:10122022-101... 55 1e-07
Medtr5g060920.1 | DUF223 domain protein | LC | chr5:25336865-253... 54 1e-07
Medtr3g084550.1 | DUF223 domain protein | LC | chr3:38189762-381... 54 2e-07
Medtr1g072220.1 | DUF223 domain protein | LC | chr1:32050688-320... 53 4e-07
Medtr5g054640.1 | animal RPA1 domain protein | LC | chr5:2249625... 53 4e-07
Medtr5g032920.1 | PIF1 DNA helicase/replication A1-like protein,... 53 4e-07
Medtr1g096860.1 | animal RPA1 domain protein | LC | chr1:4364240... 52 6e-07
Medtr7g110100.1 | replication factor-A carboxy-terminal domain p... 52 6e-07
Medtr3g452170.1 | DUF223 domain protein | HC | chr3:18995882-189... 52 7e-07
Medtr8g465040.1 | animal RPA1 domain protein | LC | chr8:2310582... 52 8e-07
Medtr1g056650.1 | DUF223 domain protein | LC | chr1:24776375-247... 51 1e-06
Medtr8g027910.1 | DUF223 domain protein | LC | chr8:10235198-102... 50 3e-06
Medtr6g477950.1 | B3 DNA-binding domain protein | LC | chr6:2871... 50 3e-06
Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944... 50 3e-06
Medtr7g025160.1 | animal RPA1 domain protein, putative | LC | ch... 49 4e-06
Medtr4g022520.1 | DUF223 domain protein | HC | chr4:7510297-7517... 48 1e-05
>Medtr8g059025.1 | animal RPA1 domain protein | LC |
chr8:20549873-20550376 | 20130731
Length = 138
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 68/97 (70%)
Query: 26 PKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVE 85
P +D WR+KVR+LR+W++ + P + ++ +VLID +G KI ++K +L F+ +L E
Sbjct: 13 PDRDGWRIKVRILRLWEVPTLLRPDQTNSLEMVLIDDKGAKIHASVRKQLLYVFQPKLSE 72
Query: 86 GSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
G VY++++F+V + G++R T H +K+VF +TKV++
Sbjct: 73 GKVYKMSFFSVAPSVGSYRTTLHPYKLVFQMKTKVQV 109
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 119 KVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISK 176
KVRI+ +W P + E++L+D +G+KI ASV K + + ++ G VYK+S
Sbjct: 21 KVRILRLWEVPTLLRPDQTNSLEMVLIDDKGAKIHASVRKQLLYVFQPKLSEGKVYKMSF 80
Query: 177 FKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSF 218
F V P+ R T H Y+LVF T + +S IP G S
Sbjct: 81 FSVAPSVGSYRTTLHPYKLVFQMKTKVQVSESVLIPTYGVSL 122
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 67/96 (69%)
Query: 26 PKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVE 85
P + WR++VRV+R+W++ +P++ ++ +VL+D GVKI+ I++K ++ F+ L E
Sbjct: 13 PGRLNWRIRVRVVRMWEVPTFLKPNQANSLEMVLLDQMGVKIQAIVRKQLIYVFQKRLRE 72
Query: 86 GSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVR 121
G VY I+YF+V ++G++RA H +KIVF TKV+
Sbjct: 73 GEVYNISYFSVAPSTGSYRAATHPYKIVFQMTTKVQ 108
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 114 FNSQTKVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFV 171
N + +VR++ MW P + E++LLD+ G KIQA V K + + + G V
Sbjct: 16 LNWRIRVRVVRMWEVPTFLKPNQANSLEMVLLDQMGVKIQAIVRKQLIYVFQKRLREGEV 75
Query: 172 YKISKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIF 231
Y IS F V P+T R +H Y++VF T + +IP G SF + +
Sbjct: 76 YNISYFSVAPSTGSYRAATHPYKIVFQMTTKVQSCTSATIPLYGLSFTSIVDVSNHTVEY 135
Query: 232 SHLSDFIGVVSSVSAVWRFVTEGKTTKMMIVELGDY 267
+L D +G+V++VS +V +G TKM+I E+ D+
Sbjct: 136 DYLVDVMGLVTAVSEEREYVRDGSVTKMIIFEVTDH 171
>Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 |
20130731
Length = 665
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 120 VRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISKF 177
VR+I +W +P S E++L+D+ G KI A++ K + + ++ G VYK+S F
Sbjct: 24 VRVIRLWE-----VPLFTS-IEMVLIDQNGVKIHATIPKQLMYLFQHKLIEGKVYKLSNF 77
Query: 178 KVIPNTRELRCTSHGYRLVFNTHTILTLSGD---TSIPREGWSFYDTGYIERCRGIFSHL 234
V+ N+ R T H Y+L+F T + S D + IP G + D I + +L
Sbjct: 78 TVLLNSGAYRTTHHTYKLIFQMKTKVEESHDYEISLIPNHGLTLTDISQITSRTQDYEYL 137
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVELGDY 267
D IG+++ +SA FV +GK TK++++EL D+
Sbjct: 138 VDVIGLMTGISAEREFVRDGKLTKILVIELTDH 170
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 6/93 (6%)
Query: 29 DTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGSV 88
D WR VRV+R+W++ P+ +I +VLID GVKI I K ++ F+ +L+EG V
Sbjct: 18 DAWRFVVRVIRLWEV-PLFT-----SIEMVLIDQNGVKIHATIPKQLMYLFQHKLIEGKV 71
Query: 89 YRITYFNVISNSGAFRATEHGFKIVFNSQTKVR 121
Y+++ F V+ NSGA+R T H +K++F +TKV
Sbjct: 72 YKLSNFTVLLNSGAYRTTHHTYKLIFQMKTKVE 104
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 61/94 (64%)
Query: 28 KDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGS 87
+D W++KVRVLR+W++ +P + ++ +VLID G KI ++K + F+ +L EG
Sbjct: 15 EDGWKIKVRVLRLWEVPSFLKPDQTNSLEMVLIDEMGTKIHASVRKQLFYVFQSKLSEGK 74
Query: 88 VYRITYFNVISNSGAFRATEHGFKIVFNSQTKVR 121
VY ++ F+V + G++R T H +KIVF TKV+
Sbjct: 75 VYEMSCFSVAPSVGSYRTTLHPYKIVFQMTTKVQ 108
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 107 EHGFKIVFNSQTKVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRG 164
E G+KI KVR++ +W + P + E++L+D+ G+KI ASV K + +
Sbjct: 15 EDGWKI------KVRVLRLWEVPSFLKPDQTNSLEMVLIDEMGTKIHASVRKQLFYVFQS 68
Query: 165 EIFTGFVYKISKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYI 224
++ G VY++S F V P+ R T H Y++VF T + SIP G S +
Sbjct: 69 KLSEGKVYEMSCFSVAPSVGSYRTTLHPYKIVFQMTTKVQACEGASIPSLGISLCKIADV 128
Query: 225 ERCRGIFSHLSDFIGVVSSVSAVWRFVTEGKTTKMMIVELGD 266
+ +L D +G ++ +S +V +GK TKM+I E+ D
Sbjct: 129 CQHTSDHDYLVDVLGFMTGISVEREYVRDGKVTKMVIFEITD 170
>Medtr6g039240.1 | animal RPA1 domain protein | LC |
chr6:14180761-14182238 | 20130731
Length = 289
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 63/100 (63%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVELGDYV 268
D IGV+ V + +G T + G+YV
Sbjct: 139 VDVIGVMIGVGVEREYERDG-TYRFKCTLFGEYV 171
>Medtr1g094230.1 | animal RPA1 domain protein | LC |
chr1:42436471-42437983 | 20130731
Length = 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 63/100 (63%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVELGDYV 268
D IGV+ V + +G T + G+YV
Sbjct: 139 VDVIGVMIGVGVEREYERDG-TYRFKCTLFGEYV 171
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 64/108 (59%)
Query: 14 LNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKK 73
+ P + I P K+ W ++VRV+R+W + + + PY++ +VL+D +G +I +++
Sbjct: 1 MAPKIDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRR 60
Query: 74 GMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVR 121
++ K+ EL E V+ I F+V SN G++R H +KI F TK++
Sbjct: 61 TLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIK 108
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 119 KVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISK 176
+VR++ +W R + E++L+D +G +I ASV + ++ E+ V+ I
Sbjct: 21 RVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRRTLIYKYEKELREDRVFSIGN 80
Query: 177 FKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHLSD 236
F V N R H Y++ F T + D +P + + D+ I + +L D
Sbjct: 81 FSVASNVGSYRTARHPYKINFQYGTKIKQCDDKFVPADIYVIGDSREIFQSEYDTDYLID 140
Query: 237 FIGVVSSVSAVWRFVTEGKTTKMMIVELGDYVYFH 271
+G++ +V + G +KM+ +EL DY F
Sbjct: 141 VMGMLKAVGVEKSYTRNGSQSKMIPIEL-DYDGFR 174
>Medtr8g467450.1 | animal RPA1 domain protein | LC |
chr8:24241111-24240561 | 20130731
Length = 142
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%)
Query: 26 PKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVE 85
P ++ WR KV++LR+W++ +P ++ +VLID +G KI ++K +L F+ +L E
Sbjct: 13 PWREGWRFKVKILRMWEVPAFLNLDQPNSLEMVLIDEKGDKIHATVRKQLLYVFQKKLAE 72
Query: 86 GSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRIIS 124
Y++ YF++ N G + T FK++F +TKV+ I
Sbjct: 73 EDAYKMFYFSIAPNVGYYHTTTQEFKLIFQMKTKVQKIE 111
>Medtr8g036090.1 | animal RPA1 domain protein | HC |
chr8:13279086-13278300 | 20130731
Length = 172
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 63/100 (63%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV+ V + +G TKM ++EL
Sbjct: 139 VDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr4g471610.1 | animal RPA1 domain protein | HC |
chr4:27071837-27072623 | 20130731
Length = 172
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 63/100 (63%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV+ V + +G TKM ++EL
Sbjct: 139 VDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr3g078440.1 | animal RPA1 domain protein | HC |
chr3:35350146-35349360 | 20130731
Length = 172
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 63/100 (63%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV+ V + +G TKM ++EL
Sbjct: 139 VDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr7g089660.1 | animal RPA1 domain protein | LC |
chr7:35114160-35121568 | 20130731
Length = 236
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 62/100 (62%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VLID +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQNYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKNQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SN G++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKL 109
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W N + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQNYKNKKLPF---SMELVLIDRKGDRIGASIRRTLIYKFKNQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPNVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVELGDYV 268
D IGV+ V + +G T + G+YV
Sbjct: 139 VDVIGVMIGVGVEKEYERDG-TYRFKCTLFGEYV 171
>Medtr8g088810.1 | DUF223 domain protein | LC |
chr8:36895897-36893498 | 20130731
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 62/100 (62%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ VLID +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDRKGDQIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ F+V SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVKL 109
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E +L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMEFVLIDRKGDQIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFDVASNSGSYRPSHNEYKLNFTINTKVKLSKTILVPINVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVELGDYVY 269
D IGV+ V + EG TKM ++EL Y
Sbjct: 139 VDVIGVIIGVGVEREYEREGTKTKMNVIELDSNGY 173
>Medtr8g463820.1 | animal RPA1 domain protein | LC |
chr8:22514633-22516142 | 20130731
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 63/100 (63%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ F+V SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVELGDYV 268
D IGV+ V + +G T + G+YV
Sbjct: 139 VDVIGVMIGVGVEREYERDG-TYRFKCTLFGEYV 171
>Medtr6g051890.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:18071124-18068908 | 20130731
Length = 399
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 60/93 (64%)
Query: 28 KDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGS 87
++ WR+++R R+W + +P + ++ +VLID +G KI ++K +L F+ LV+G
Sbjct: 19 REAWRIEMRTARLWTIHTFVKPDQINSVEMVLIDDKGGKIHVTVRKQLLYLFQHLLVKGK 78
Query: 88 VYRITYFNVISNSGAFRATEHGFKIVFNSQTKV 120
VY+I YF+V + G++R+T H KIVF TKV
Sbjct: 79 VYKIAYFSVAPSVGSYRSTLHPHKIVFQMNTKV 111
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 119 KVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISK 176
++R +W P + E++L+D +G KI +V K + + + G VYKI+
Sbjct: 25 EMRTARLWTIHTFVKPDQINSVEMVLIDDKGGKIHVTVRKQLLYLFQHLLVKGKVYKIAY 84
Query: 177 FKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHLSD 236
F V P+ R T H +++VF +T + ++ I G +F + I + +L D
Sbjct: 85 FSVAPSVGSYRSTLHPHKIVFQMNTKVLECENSLISPCGLTFSNISKICSHTDEYDYLFD 144
Query: 237 FIGVVSSVSAVWRFV 251
+GV++ +S FV
Sbjct: 145 VMGVMTDISVERIFV 159
>Medtr3g095950.1 | animal RPA1 domain protein | HC |
chr3:43845609-43846394 | 20130731
Length = 172
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 62/100 (62%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VLID +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKNQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SN G++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKL 109
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLIDRKGDRIGASIRRTLIYKFKNQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV+ V + +G TKM ++EL
Sbjct: 139 VDVIGVMIGVGVEKEYERDGVKTKMNVIEL 168
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 24 IDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGEL 83
I K W +K RV+R+W + + P++I +VL+D EG +I IKK +L KF+ E+
Sbjct: 11 ISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLLYKFQSEI 70
Query: 84 VEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTK 119
EG VY V +N G+++ T + +K+ F TK
Sbjct: 71 REGKVYSFENMGVAANGGSYKTTHYPYKLNFQFGTK 106
>Medtr3g116750.1 | animal RPA1 domain protein | HC |
chr3:54610965-54611750 | 20130731
Length = 172
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV R W P+++ +VLID +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVARAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKNQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SN G++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKL 109
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR+ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVARAWFGQDYKNKKLPF---SMELVLIDRKGDRIGASIRRTLIYKFKNQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV+ V + +G TKM ++EL
Sbjct: 139 VDVIGVMIGVGVEKEYERDGVKTKMNVIEL 168
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 10/110 (9%)
Query: 13 PLNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIK 72
P + + I G KD W++KVRVLR+W++ P + ++ + G KI ++
Sbjct: 4 PFHSVSEIATG----KDGWKIKVRVLRLWEVPAFLNPDQTNSVEM------GTKIHAGVR 53
Query: 73 KGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
K +L F+ +L EG VY+++ F+V + G++R T H +KIVF TKV++
Sbjct: 54 KQLLYVFQSKLSEGKVYQMSCFSVAPSVGSYRTTSHPYKIVFQMTTKVQV 103
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 119 KVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISK 176
KVR++ +W A P + E+ G+KI A V K + + ++ G VY++S
Sbjct: 21 KVRVLRLWEVPAFLNPDQTNSVEM------GTKIHAGVRKQLLYVFQSKLSEGKVYQMSC 74
Query: 177 FKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSH--L 234
F V P+ R TSH Y++VF T + + D SIP G S ++ C+ H L
Sbjct: 75 FSVAPSVGSYRTTSHPYKIVFQMTTKVQVCEDASIPSFGISL--CKIVDVCQHTSDHDYL 132
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVELGD 266
D +G ++ +SA +V +GK TKM++ E+ D
Sbjct: 133 VDVLGFMTDISAEREYVRDGKVTKMVVFEITD 164
>Medtr8g096680.1 | animal RPA1 domain protein | HC |
chr8:40558216-40559002 | 20130731
Length = 172
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 63/100 (63%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ F+V SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV+ V + +G TKM ++EL
Sbjct: 139 VDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr1g036740.1 | animal RPA1 domain protein | HC |
chr1:13497342-13498128 | 20130731
Length = 172
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 63/100 (63%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ F+V SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLMDRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N+ R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV+ V + +G TKM ++EL
Sbjct: 139 VDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr1788s0010.1 | animal RPA1 domain protein | LC |
scaffold1788:754-253 | 20130731
Length = 139
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VL+D +G +I I++ ++ K + +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKSKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ F+V SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKL 109
>Medtr8g062060.1 | DUF223 domain protein | LC |
chr8:25911934-25914219 | 20130731
Length = 530
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%)
Query: 22 IGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRG 81
+ +DP K + VRVLR+WD+ P + + ++L+D+EG ++ + ++KFR
Sbjct: 9 VALDPDKTNCSIMVRVLRLWDVESTLMPGRVNSSELLLMDIEGYRMHATVPPFCVEKFRH 68
Query: 82 ELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKV 120
LVE VY IT F+V+ N F +T ++IVF+ T +
Sbjct: 69 MLVENRVYIITMFSVLPNLDEFMSTSSAYRIVFHQDTDL 107
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 115 NSQTKVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASV---CKDHRLRGEIFTGFV 171
N VR++ +W+ + +P + +E++L+D EG ++ A+V C + + R + V
Sbjct: 17 NCSIMVRVLRLWDVESTLMPGRVNSSELLLMDIEGYRMHATVPPFCVE-KFRHMLVENRV 75
Query: 172 YKISKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTG-YIERCRGI 230
Y I+ F V+PN E TS YR+VF+ T L + ++IP S + +++ RG
Sbjct: 76 YIITMFSVLPNLDEFMSTSSAYRIVFHQDTDLMATTCSAIPECRLSLITSADLLKKTRGC 135
Query: 231 FSHLSDFIGVVSS------------VSAVWRFVTEGKTTKMMIVELGDYV-YFHTLI 274
S+ D IG++++ +S+V +F + TK G Y+ FH L+
Sbjct: 136 -SYAVDVIGLLTAMHHEYFLDSTNHLSSVLKFELTDERTKFECALTGKYIGIFHELL 191
>Medtr7g093810.1 | animal RPA1 domain protein | HC |
chr7:37315424-37314639 | 20130731
Length = 172
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+++ +VLID +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKNQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L E V+ I+ FNV SN G++R + + +K+ F TKV++
Sbjct: 70 LQERMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKL 109
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L+D++G +I AS+ + ++ + ++ V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPF---SMELVLIDRKGDRIGASIRRTLIYKFKNQLQERMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N R + + Y+L F +T + LS +P +SF + ++L
Sbjct: 79 SSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV+ V + +G TKM ++EL
Sbjct: 139 VDVIGVMIGVGVEKEYERDGVKTKMNVIEL 168
>Medtr2g032570.1 | animal RPA1 domain protein | LC |
chr2:12255994-12255202 | 20130731
Length = 174
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 62/100 (62%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+ + +VL++ +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTINTKVKL 109
>Medtr3g044760.1 | DUF223 domain protein | LC |
chr3:14435139-14437639 | 20130731
Length = 444
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 119 KVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISK 176
+VR++ +W + + E++LLD++G++IQA++ D R + VY S
Sbjct: 21 RVRVVRLWRIMSSLVRGRVIFMEMVLLDQDGNRIQATIPPDCVDRFQNTFHENRVYMFSN 80
Query: 177 FKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHLSD 236
FKV+PN R R TSH +RL T++ I R G+SF+ + I + HL D
Sbjct: 81 FKVLPNDRSTRVTSHNHRLKLWEETVVVNHDGYIIQRFGFSFFSSAQILEHQHGCGHLID 140
Query: 237 FIGVVSSVSAVWRFVTEGKTTKMMIV 262
G+++S+ + FV + + I
Sbjct: 141 VFGLLTSLH--YDFVVDARQNLATIA 164
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 14 LNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKK 73
++P + + + P + W ++VRV+R+W + + + +VL+D +G +I+ I
Sbjct: 1 MSPPITSLLNVRPPRMAWNIRVRVVRLWRIMSSLVRGRVIFMEMVLLDQDGNRIQATIPP 60
Query: 74 GMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKV 120
+ +F+ E VY + F V+ N + R T H ++ +T V
Sbjct: 61 DCVDRFQNTFHENRVYMFSNFKVLPNDRSTRVTSHNHRLKLWEETVV 107
>Medtr3g056240.1 | DUF223 domain protein | HC |
chr3:22396065-22393475 | 20130731
Length = 323
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%)
Query: 24 IDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGEL 83
I K +K RV+R+W + + P++I +VL+D EG +I IKK + KF+ E+
Sbjct: 11 ISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLWYKFQSEI 70
Query: 84 VEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTK 119
EG VY V +N G+++ T H +K+ F TK
Sbjct: 71 REGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTK 106
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Query: 119 KVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISK 176
K R++ +W T+ E++L+D EGS+I AS+ K ++ + EI G VY
Sbjct: 21 KARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLWYKFQSEIREGKVYSFEN 80
Query: 177 FKVIPNTRELRCTSHGYRLVFNTHT-ILTLSGDTSIPREGWSFYDTGYIERCRGIFSHLS 235
V N + T H Y+L F T L L G + + F I +L
Sbjct: 81 MGVAANGGSYKTTHHPYKLNFQFGTKCLPLCG-ALVSGSDFKFVPISDIVGGSYDCDYLV 139
Query: 236 DFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IG+++ V + G TK+ ++ +
Sbjct: 140 DVIGMLTGVGTEREYERNGSATKLNVIAM 168
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%)
Query: 24 IDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGEL 83
I K +K RV+R+W + + P++I +VL+D EG +I IKK + KF+ E+
Sbjct: 11 ISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLWYKFQSEI 70
Query: 84 VEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTK 119
EG VY V +N G+++ T H +K+ F TK
Sbjct: 71 REGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTK 106
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Query: 119 KVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISK 176
K R++ +W T+ E++L+D EGS+I AS+ K ++ + EI G VY
Sbjct: 21 KARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLWYKFQSEIREGKVYSFEN 80
Query: 177 FKVIPNTRELRCTSHGYRLVFNTHT-ILTLSGDTSIPREGWSFYDTGYIERCRGIFSHLS 235
V N + T H Y+L F T L L G + + F I +L
Sbjct: 81 MGVAANGGSYKTTHHPYKLNFQFGTKCLPLFG-ALVSGSDFKFVPISDIVGGSYDCDYLV 139
Query: 236 DFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IG+++ V + G TK+ ++ +
Sbjct: 140 DVIGMLTGVGTEREYERNGSATKLNVIAM 168
>Medtr5g055160.1 | animal RPA1 domain protein | LC |
chr5:22720640-22718177 | 20130731
Length = 270
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+R W P+ + +VL++ +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRRTLIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SN+G++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFNVASNNGSYRPSCNEYKLDFTINTKVKL 109
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 120 VRIISMW---NTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKI 174
VR++ W + + + LP E++L++++G +I AS+ + ++ + ++ G V+ I
Sbjct: 22 VRVVRAWFGQDYKNKKLPFFM---ELVLMNRKGDRIGASIRRTLIYKFKEQLQEGMVFTI 78
Query: 175 SKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHL 234
S F V N R + + Y+L F +T + LS +P +SF ++ ++L
Sbjct: 79 SSFNVASNNGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVYSFTPAPHVFNESYDNNYL 138
Query: 235 SDFIGVVSSVSAVWRFVTEGK 255
D IGV+ V + +GK
Sbjct: 139 VDVIGVMIGVGVEREYERDGK 159
>Medtr0032s0020.1 | PIF1-like helicase | LC |
scaffold0032:18195-20915 | 20130731
Length = 586
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 22 IGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRG 81
+ +DP K + VRVLR+WD+ P + + ++L+D+EG ++ + ++KFR
Sbjct: 9 VALDPDKTNCSIMVRVLRLWDVESTLMPGRVNSSELLLMDIEGYRMHATVPPFCVEKFRH 68
Query: 82 ELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKV 120
LVE VY IT F V+ N F +T + IVF+ T +
Sbjct: 69 MLVENRVYIITMFFVLPNFDEFMSTSSAYHIVFHQDTDL 107
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 115 NSQTKVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASV---CKDHRLRGEIFTGFV 171
N VR++ +W+ + +P + +E++L+D EG ++ A+V C + + R + V
Sbjct: 17 NCSIMVRVLRLWDVESTLMPGRVNSSELLLMDIEGYRMHATVPPFCVE-KFRHMLVENRV 75
Query: 172 YKISKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPR 213
Y I+ F V+PN E TS Y +VF+ T L + ++IP+
Sbjct: 76 YIITMFFVLPNFDEFMSTSSAYHIVFHQDTDLMATTCSAIPK 117
>Medtr2g054710.1 | animal RPA1 domain protein | LC |
chr2:23363838-23365033 | 20130731
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 27 KKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEG 86
+K W +K +++R+W + P++I +V++D G +I +KK ++ KFR +L EG
Sbjct: 16 EKTFWNLKGKIIRLWQVSDFNGNMMPFSIEMVILDEAGDRIHASLKKTLIYKFRNDLFEG 75
Query: 87 SVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVR 121
+ V +N G +R T+H +K+ F +KV+
Sbjct: 76 KCFSFENMGVTNNGGGYRTTKHTYKLNFQFSSKVK 110
>Medtr8g479260.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:33777150-33779789 | 20130731
Length = 555
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 27 KKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEG 86
+K W +K +++R+W + P++I +V++D G +I +KK ++ KFR +L EG
Sbjct: 16 EKTFWNLKGKIIRLWQVSDFNGNRMPFSIEMVILDEAGDRIHASLKKTLIYKFRNDLFEG 75
Query: 87 SVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVR 121
+ V +N G +R T+H +K+ F +KV+
Sbjct: 76 KCFSFENMGVANNGGGYRTTKHTYKLNFQLSSKVK 110
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 119 KVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISK 176
K +II +W + E+++LD+ G +I AS+ K ++ R ++F G +
Sbjct: 23 KGKIIRLWQVSDFNGNRMPFSIEMVILDEAGDRIHASLKKTLIYKFRNDLFEGKCFSFEN 82
Query: 177 FKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSF----------YDTGYIER 226
V N R T H Y+L F + + +I + + YDT Y
Sbjct: 83 MGVANNGGGYRTTKHTYKLNFQLSSKVKYLPALTITKSPYQLVPISEVIGGTYDTDY--- 139
Query: 227 CRGIFSHLSDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
L D IGV++ V + G TK+ ++EL
Sbjct: 140 -------LVDIIGVLTGVGSERELERNGNMTKLNVIEL 170
>Medtr2g008650.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:1569207-1566568 | 20130731
Length = 555
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 27 KKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEG 86
+K W +K +++R+W + P++I +V++D G +I +KK ++ KFR +L EG
Sbjct: 16 EKTFWNLKGKIIRLWQVSDFNGNRMPFSIEMVILDEAGDRIHASLKKTLIYKFRNDLFEG 75
Query: 87 SVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVR 121
+ V +N G +R T+H +K+ F +KV+
Sbjct: 76 KCFSFENMGVANNGGGYRTTKHTYKLNFQFSSKVK 110
>Medtr6g069230.1 | animal RPA1 domain protein | LC |
chr6:24915605-24909459 | 20130731
Length = 356
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 114 FNSQTKVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASV---CKD---HRLRGEIF 167
N KVR++ MWN + + + E+ILLD+EG+KIQASV C + H L E
Sbjct: 112 MNWSVKVRLLRMWNVESSIVAGKVNSLELILLDREGNKIQASVPLQCIEVFNHIL--EEN 169
Query: 168 TGFVYKISKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERC 227
G+V+ S F V+ N ++ T + +RL+F+++T + + +I + G S + + I +
Sbjct: 170 RGYVF--SDFHVVSNIADMMTTHNSHRLIFHSNTEVIFTDIPAIDKFGLSIHGSEAISKH 227
Query: 228 RGIFSHLSDFIGVVSSVSAVWRFVTEGKTTKMMIVELGDYVYFHTLIFISICWSFSFL 285
+S+L D IG ++ V + G+ + ++ EL + + F ++ + SF +
Sbjct: 228 VFGYSYLVDVIGFLTDVHPEYVDDPFGRLSTVLRFELTN-LRFQCALYGKVVRSFQLM 284
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 13 PLNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIK 72
PL+ L S G + W VKVR+LR+W++ K ++ ++L+D EG KI+ +
Sbjct: 100 PLSGLMSPKTG----RMNWSVKVRLLRMWNVESSIVAGKVNSLELILLDREGNKIQASVP 155
Query: 73 KGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKV 120
++ F L E Y + F+V+SN T + +++F+S T+V
Sbjct: 156 LQCIEVFNHILEENRGYVFSDFHVVSNIADMMTTHNSHRLIFHSNTEV 203
>Medtr7g117425.1 | animal RPA1 domain protein | LC |
chr7:48554380-48555674 | 20130731
Length = 258
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 24 IDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGEL 83
I P K++W + VR++ W + V + P+++ + G KI +++ ++ KF +L
Sbjct: 11 ISPVKESWSIVVRIVCAWFVRDVNRDAHPFSLDM------GNKIHATVRRTLIYKFEKDL 64
Query: 84 VEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
EG VY ++ F V +N G++R T+H +K+ F TKV++
Sbjct: 65 QEGKVYSMSCFGVAANLGSYRTTKHEYKLNFQFNTKVKL 103
>Medtr5g085220.1 | animal RPA1 domain protein | LC |
chr5:36789021-36788235 | 20130731
Length = 172
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 60/100 (60%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + VRV+ W +++ +VLID +G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVRVVPAWFGKDYKNKKLSFSMDLVLIDRKGDRIGASIRRILIYKFKEQ 69
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ F V SNSG++R + + +K+ F TKV++
Sbjct: 70 LQEGMVFTISSFIVASNSGSYRPSRNEYKLNFTINTKVKL 109
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 120 VRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISKF 177
VR++ W + + +++L+D++G +I AS+ + ++ + ++ G V+ IS F
Sbjct: 22 VRVVPAWFGKDYKNKKLSFSMDLVLIDRKGDRIGASIRRILIYKFKEQLQEGMVFTISSF 81
Query: 178 KVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSF------YDTGYIERCRGIF 231
V N+ R + + Y+L F +T + LS +P +SF ++ Y C
Sbjct: 82 IVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNC---- 137
Query: 232 SHLSDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
L D IGV+ V + + TKM ++EL
Sbjct: 138 --LVDVIGVMIGVGVEREYERDSVKTKMNVIEL 168
>Medtr6g465570.1 | animal RPA1 domain protein | LC |
chr6:23330063-23328693 | 20130731
Length = 172
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
GI + VRV+ +W + P ++H++L+D + KI ++K ++ F+ +
Sbjct: 6 GIKCGNTDLALTVRVIHLWSVPDRTNPVVDGSLHMLLLDEKCGKIHASVRKNLIHLFKDQ 65
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRIISMWNTRAR------YLPTV 136
+ EGS Y I F V SN A++ T H +K+ F T V +S N A ++ V
Sbjct: 66 IDEGSAYVIESFMVGSNDHAYKTTGHKYKLNFMGGTNVFRVSSVNIPAHHFTFMPFMQIV 125
Query: 137 QSCTEVILLDKEGSKIQASVCKDHRLRGE 165
+ E LLD G ++ V K+ G+
Sbjct: 126 SATREDKLLDVIGHVVEKDVIKETEKNGK 154
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 120 VRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISKF 177
VR+I +W+ R P V ++LLD++ KI ASV K+ H + +I G Y I F
Sbjct: 18 VRVIHLWSVPDRTNPVVDGSLHMLLLDEKCGKIHASVRKNLIHLFKDQIDEGSAYVIESF 77
Query: 178 KVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYD-TGYIERCRGIFSHLSD 236
V N + T H Y+L F T + +IP ++F + R L D
Sbjct: 78 MVGSNDHAYKTTGHKYKLNFMGGTNVFRVSSVNIPAHHFTFMPFMQIVSATRE--DKLLD 135
Query: 237 FIGVVSSVSAVWRFVTEGKTTKMMIVELGD 266
IG V + GK K++ + L D
Sbjct: 136 VIGHVVEKDVIKETEKNGKKRKVLDIMLED 165
>Medtr4g028320.1 | animal RPA1 domain protein | LC |
chr4:9767872-9767142 | 20130731
Length = 153
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 120 VRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISKF 177
VR++ W + + E++L+D++G +I AS+ + ++ + ++ G V+ IS F
Sbjct: 3 VRVVRAWFVQDYKNKKLSFSMELVLMDRKGDRIGASIRRTLIYKSKEQLQEGMVFTISSF 62
Query: 178 KVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSF---YDTGYIERCRGIFSHL 234
V N+ R + + Y+L F +T + LS +P +SF YD + E F L
Sbjct: 63 DVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTSAYDV-FNESYDNNF--L 119
Query: 235 SDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
D IGV++ V + +G TKM ++EL
Sbjct: 120 VDVIGVMTGVGVEREYERDGVKTKMNVIEL 149
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 55/88 (62%)
Query: 35 VRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGSVYRITYF 94
VRV+R W + +++ +VL+D +G +I I++ ++ K + +L EG V+ I+ F
Sbjct: 3 VRVVRAWFVQDYKNKKLSFSMELVLMDRKGDRIGASIRRTLIYKSKEQLQEGMVFTISSF 62
Query: 95 NVISNSGAFRATEHGFKIVFNSQTKVRI 122
+V SNSG++R + + +K+ F TKV++
Sbjct: 63 DVASNSGSYRPSRNEYKLNFTINTKVKL 90
>Medtr8g469510.1 | PIF1 DNA helicase/replication A1-like protein,
putative | LC | chr8:25279627-25279236 | 20130731
Length = 93
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 55/87 (63%)
Query: 33 VKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGSVYRIT 92
V VR++R+W+ + + ++ +VL+D +G KI I+K +L + +L+EG +Y+++
Sbjct: 3 VLVRIVRMWEAPTFLKHDQTNSLEMVLVDEKGCKIHATIQKQLLYLIQAKLIEGKIYKMS 62
Query: 93 YFNVISNSGAFRATEHGFKIVFNSQTK 119
+F+V +SG++ T H +K VF + K
Sbjct: 63 FFSVAHSSGSYCTTLHLYKPVFPYEDK 89
>Medtr7g051400.1 | replication factor-A carboxy-terminal domain
protein | LC | chr7:18001910-18004476 | 20130731
Length = 542
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 16 PLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGM 75
PL + I K +++VRV+ VW + P++ +IH++L+D + KI+ KK +
Sbjct: 3 PLITPAAAIVAGKINIKLRVRVIHVWTVSEFNNPNEDNSIHMLLLDDKFGKIQASAKKHL 62
Query: 76 LKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTK 119
+ + R + EGS Y I V N ++ T+H FK+ +TK
Sbjct: 63 VSRIRSNVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDKTK 106
>Medtr5g056060.1 | transmembrane protein, putative | HC |
chr5:23106867-23105553 | 20130731
Length = 251
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + V+V+R W P+++ + G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVKVVRAWFGQDYKNKKLPFSMEL------GDQIGASIRRTLIYKFKNQ 63
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SNS +R + +K+ F TKV++
Sbjct: 64 LQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKL 103
>Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268124
| 20130731
Length = 272
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + V+V+R W P+++ + G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVKVVRAWFGQDYKNKKLPFSMEL------GDQIGASIRRTLIYKFKNQ 63
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SNS +R + +K+ F TKV++
Sbjct: 64 LQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKL 103
>Medtr5g068430.1 | DUF223 domain protein | LC |
chr5:28968884-28968008 | 20130731
Length = 195
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + V+V+R W P+++ V+ K I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVKVVRAWFGQDYKNKKLPFSMEVI-------KFGASIRRTLIYKFKNQ 62
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG ++ I+ FNV SNS +R + +K+ F TKV++
Sbjct: 63 LQEGMMFTISSFNVASNSDLYRPSHKEYKLNFTINTKVKL 102
>Medtr7g104000.1 | animal RPA1 domain protein | HC |
chr7:42047405-42048721 | 20130731
Length = 242
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
+ P+K +W + V+V+R W P+++ + G +I I++ ++ KF+ +
Sbjct: 10 NVSPRKQSWTLVVKVVRAWFGQDYKNKKLPFSMEL------GDQIGASIRRTLIYKFKNQ 63
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
L EG V+ I+ FNV SN+ +R + +K+ F TKV++
Sbjct: 64 LQEGMVFTISSFNVASNNDLYRPSRKEYKLNFTINTKVKL 103
>Medtr1g105785.1 | replication factor-A carboxy-terminal domain
protein | HC | chr1:47732917-47735741 | 20130731
Length = 566
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 11 LMPL-NPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEG 69
+ PL P+ +I G K +++VRV+ VW + P++ +IH++L+D + KI+
Sbjct: 1 MAPLITPVAAIVAG----KINIKLRVRVVHVWTVSEFNNPNEDNSIHMLLLDDKLGKIQA 56
Query: 70 IIKKGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTK 119
KK ++ + R + EGS Y I V N ++ T+H FK+ TK
Sbjct: 57 SAKKHLVPRIRSNVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDNTK 106
>Medtr5g053590.1 | DUF223 domain protein | LC |
chr5:22080013-22077419 | 20130731
Length = 524
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 16 PLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGM 75
PL+ I I+ K W++ VRV+ DM+ V I +VL D E +I+ I+ +
Sbjct: 4 PLQKI-KNINDFKSLWKIAVRVV---DMWTVANSKNKQHIEMVLCDKEVDRIQIILPFEL 59
Query: 76 LKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRIIS 124
+F+G +VE + + + F+V N + +AT+H F +VFN T V I
Sbjct: 60 KDQFKGRIVENTTFTLQNFDVEKNEMSIKATDHPFWLVFNGGTSVDNID 108
>Medtr2g058350.1 | DUF223 domain protein | LC |
chr2:24115610-24113146 | 20130731
Length = 393
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 117 QTKVRIISMWNTRARYLPTVQSCTEVILLDKEGSKIQASVCKD------HRLRGEIFTGF 170
+ KVR+I MWN + LP + E+ILLD +G+KI A++ H R F
Sbjct: 19 RVKVRVIRMWNVESELLPGRVNSIELILLDIDGNKIHATIPSHCVGYFIHVFR----EFF 74
Query: 171 VYKISKFKVIPNTRELRCTSHGYRLVFNTHTILTLSGDTSIPREGWSFYDTGYIERCRGI 230
VY ++ F V + + T + +++ + T++ L I R G S T I R R
Sbjct: 75 VYILAIFHVSESMSCSKATGNRHKITLHPRTVVVLDDSFLIQRYGLSCIKTDAILRPRLD 134
Query: 231 FSHLSDFIGVVSSV 244
+ L DFIG+++S+
Sbjct: 135 YFLLVDFIGLLTSL 148
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 11 LMPLNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGI 70
L+P + L ++ G + WRVKVRV+R+W++ P + +I ++L+D++G KI
Sbjct: 2 LIPFSSLNALKTG----RMDWRVKVRVIRMWNVESELLPGRVNSIELILLDIDGNKIHAT 57
Query: 71 IKKGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKV 120
I + F E VY + F+V + +AT + KI + +T V
Sbjct: 58 IPSHCVGYFIHVFREFFVYILAIFHVSESMSCSKATGNRHKITLHPRTVV 107
>Medtr2g062200.1 | DUF223 domain protein | LC |
chr2:26248587-26247742 | 20130731
Length = 185
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 142 VILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISKFKVIPNTRELRCTSHGYRLVFNT 199
++L+D G+KI A+V + ++ ++ G VY +S F V N R T H Y+L F
Sbjct: 1 MVLMDASGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQF 60
Query: 200 HTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHLSDFIGVVSSVSAVWRFVTEGKTTKM 259
+T + L G S+P + + ++ + +L D +G+++ V + G TKM
Sbjct: 61 NTKVKLCGKNSVPDDIYPISNSIVVFNSEYDTDYLVDVMGMLTGVGMQREYERNGAKTKM 120
Query: 260 MIVEL 264
+ ++L
Sbjct: 121 VAMKL 125
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 57 VVLIDVEGVKIEGIIKKGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNS 116
+VL+D G KI +++ ++ KF +L EG VY ++ F V +N G++R T+H +K+ F
Sbjct: 1 MVLMDASGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQF 60
Query: 117 QTKVRI 122
TKV++
Sbjct: 61 NTKVKL 66
>Medtr1g085690.1 | DUF223 domain protein | HC |
chr1:38294818-38296141 | 20130731
Length = 233
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 47/68 (69%)
Query: 55 IHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVF 114
+ +VL+D +G +I I++ ++ KF+ +L EG V+ I+ FNV SNSG++R + + +K+ F
Sbjct: 1 MDLVLMDRKGDRIGASIRRKLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNF 60
Query: 115 NSQTKVRI 122
TKV++
Sbjct: 61 TINTKVKL 68
>Medtr1g091180.1 | animal RPA1 domain protein | LC |
chr1:41402873-41402457 | 20130731
Length = 116
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%)
Query: 37 VLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGSVYRITYFNV 96
V+R W + +++ +VL D +G +I I++ ++ KF +L EG V+ IT F+
Sbjct: 2 VVRAWFVQDYKNEKLLFSMELVLTDQKGDRIGAFIRRTLIYKFNEQLQEGMVFTITSFDF 61
Query: 97 ISNSGAFRATEHGFKIVFNSQTKVRI 122
+ NSG +R + + +K+ F TK++I
Sbjct: 62 VCNSGLYRPSHNEYKLNFTINTKIKI 87
>Medtr5g070620.1 | hypothetical protein | HC |
chr5:29909066-29908660 | 20130731
Length = 104
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 26 PKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVE 85
P K++WR VRV+R+W+ P + ++ +VL+D +GV+I I+K +L F +LVE
Sbjct: 38 PGKESWRFIVRVVRLWEAPAFLHPEQVNSVEMVLVDEKGVRIHATIRKQLLYLFHNKLVE 97
Query: 86 GSVYRI 91
G VY++
Sbjct: 98 GVVYKL 103
>Medtr2g450060.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:22081675-22078797 | 20130731
Length = 570
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 12 MPLN-PLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGI 70
+PL P +I + KKD W++ VRV W + G+ + ++++D +G I+ +
Sbjct: 3 IPLERPFETIA-AVTNKKDFWKLAVRVKDKWTVVKDGKEH----LEMIIVDAKGNNIQVV 57
Query: 71 IKKGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRIISM 125
I G + L+E + Y ++ F V +N AF+A++H + + +NS T V +++
Sbjct: 58 IPTGYKAVYDKILMENTTYTLSNFQVQNNDLAFKASDHKYMLKWNSATNVVDVNL 112
>Medtr3g032190.1 | DUF223 domain protein | LC |
chr3:10122022-10121616 | 20130731
Length = 107
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 24 IDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGEL 83
+ P+K +W + VRV+R W P+++ VLID +G +I I++ ++ KF+ +L
Sbjct: 11 VSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDQKGDQIGASIRRTLIYKFKEQL 70
Query: 84 VEGSVYRITYFNVISNS 100
EG V+ I+ F+V S
Sbjct: 71 QEGMVFTISSFDVASKQ 87
>Medtr5g060920.1 | DUF223 domain protein | LC |
chr5:25336865-25337277 | 20130731
Length = 109
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%)
Query: 12 MPLNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGII 71
M ++ + P+K +W + VRV+R W P+++ VL+D +G +I I
Sbjct: 1 MKISTKHDFISDVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLMDQKGDQIGASI 60
Query: 72 KKGMLKKFRGELVEGSVYRITYFNVISNS 100
++ ++ KF+ +L EG V+ I+ F+V S
Sbjct: 61 RRTLIYKFKKQLQEGMVFTISSFDVASKQ 89
>Medtr3g084550.1 | DUF223 domain protein | LC |
chr3:38189762-38189098 | 20130731
Length = 131
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 141 EVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISKFKVIPNTRELRCTSHGYRLVFN 198
E++L+D++G +I S+ + ++ + ++ G V+ IS V N+ R + + Y+L F
Sbjct: 2 ELVLMDRKGDRIGVSIRRTLIYKFKEQLQEGMVFTISSSDVASNSGLYRPSRNEYKLNFT 61
Query: 199 THTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHLSDFIGVVSSVSAVWRFVTEGKTTK 258
+T + LS +P +SF + ++L D IGV+ V + T+G TK
Sbjct: 62 INTKVKLSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEREYETDGVKTK 121
Query: 259 MMIVEL 264
M ++EL
Sbjct: 122 MNVIEL 127
>Medtr1g072220.1 | DUF223 domain protein | LC |
chr1:32050688-32051353 | 20130731
Length = 131
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 141 EVILLDKEGSKIQASVCKD--HRLRGEIFTGFVYKISKFKVIPNTRELRCTSHGYRLVFN 198
E++L+D++G +I S+ + ++ + ++ G V+ IS V N+ R + + Y+L F
Sbjct: 2 ELVLMDRKGDRIGVSIRRTLIYKFKEQLQEGMVFTISSSDVASNSDLYRPSRNEYKLNFT 61
Query: 199 THTILTLSGDTSIPREGWSFYDTGYIERCRGIFSHLSDFIGVVSSVSAVWRFVTEGKTTK 258
+T + LS +P +SF I ++L D IGV+ V + +G TK
Sbjct: 62 INTKVKLSKTVLVPTNVYSFTPAPDIFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTK 121
Query: 259 MMIVEL 264
M ++EL
Sbjct: 122 MNVIEL 127
>Medtr5g054640.1 | animal RPA1 domain protein | LC |
chr5:22496256-22495645 | 20130731
Length = 140
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 37 VLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGSVYRITYFNV 96
V+R W + +++ +VL+D G +I I+ ++ KF+ +L EG V+ IT F+
Sbjct: 2 VVRAWFVQDYKNEKLSFSMELVLMDRMGDRICVFIRITLIYKFKEQLQEGMVFTITSFDF 61
Query: 97 ISNSGAFRATEHGFKIVFNSQTKVRI 122
NSG +R + + +K+ F TK++I
Sbjct: 62 ACNSGLYRPSHNRYKLNFTINTKIKI 87
>Medtr5g032920.1 | PIF1 DNA helicase/replication A1-like protein,
putative | LC | chr5:14188599-14189420 | 20130731
Length = 96
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 24 IDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGEL 83
I P K+ + VRV+R+W + + + P+++ +VL+D +G +I +++ ++ K+ EL
Sbjct: 11 ISPSKENRTIIVRVVRLWFVRDIKKDQFPFSLEMVLMDNKGDRINASVRRTLIYKYEKEL 70
Query: 84 VEGSVYRITYFNVISNSGAFRATEH 108
E V I F SN G+++ H
Sbjct: 71 SEDRVISIGNFGFASNVGSYKTARH 95
>Medtr1g096860.1 | animal RPA1 domain protein | LC |
chr1:43642402-43642107 | 20130731
Length = 72
Score = 52.0 bits (123), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 55 IHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVF 114
+ +VL+D +G +I I++ ++ KF+ +L +G ++RI+ F+ NSG++R + +K+ F
Sbjct: 1 MELVLLDQKGDRISAFIRRTLIYKFKEQLQKGMMFRISSFDFACNSGSYRPLHNEYKLNF 60
Query: 115 NSQTKVRI 122
TKV+I
Sbjct: 61 TINTKVKI 68
>Medtr7g110100.1 | replication factor-A carboxy-terminal domain
protein | HC | chr7:45127464-45130150 | 20130731
Length = 526
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 14 LNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKK 73
+ P+ SI G K +++VRV+ +W + P++ IH++L+D + KI+ KK
Sbjct: 5 ITPVSSIVAG----KINIKLRVRVINLWTVPDFSRPTEDNFIHLLLMDEKLGKIQATAKK 60
Query: 74 GMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTK 119
++ K R + +G+ Y I V N +R T H +K+ QTK
Sbjct: 61 TLIPKIRSLVQDGAAYEIQNVLVAHNEIRYRCTGHRWKLNLIDQTK 106
>Medtr3g452170.1 | DUF223 domain protein | HC |
chr3:18995882-18993791 | 20130731
Length = 453
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 14 LNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKK 73
+ P+ SI G K ++ VRV+ +W + P++ IH++LID + KI+ KK
Sbjct: 5 ITPVSSIVAG----KINIKLHVRVINLWTVPDFSRPTEDNFIHLLLIDEKLGKIQATAKK 60
Query: 74 GMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTK 119
++ K R + +G Y I V N +R T H +K+ QTK
Sbjct: 61 TLIPKIRSLVQDGEAYEIQNVLVAHNEIRYRCTGHRWKLNMIDQTK 106
>Medtr8g465040.1 | animal RPA1 domain protein | LC |
chr8:23105820-23106515 | 20130731
Length = 171
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 14 LNPLRSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKK 73
L P+ +I G K +++VRV+ +W + P++ IH++L+D + KI+ KK
Sbjct: 5 LTPVSAIVAG----KIKLKIRVRVINLWTVSEFNNPNEITGIHMLLLDDKMGKIQAFGKK 60
Query: 74 GMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKI 112
++ K + + EGS Y I V N FR T H F++
Sbjct: 61 ILVPKIKSLVEEGSCYEIENVLVTRNETKFRCTGHWFRL 99
>Medtr1g056650.1 | DUF223 domain protein | LC |
chr1:24776375-24776671 | 20130731
Length = 72
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 55 IHVVLIDVEGVKIEGIIKKGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVF 114
+ +VL+D +G +I I++ ++ KF+ +L +G ++RI+ F+ NSG++R + +K+ F
Sbjct: 1 MELVLMDQKGDRISVFIRRTLIYKFKEQLQKGMMFRISSFDFACNSGSYRPLHNEYKLNF 60
Query: 115 NSQTKVRI 122
TKV+I
Sbjct: 61 TINTKVKI 68
>Medtr8g027910.1 | DUF223 domain protein | LC |
chr8:10235198-10233314 | 20130731
Length = 261
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 23 GIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGE 82
I +KD W++ VRV W + G+ + ++++D +G I+ +I +
Sbjct: 20 AITDQKDLWKLSVRVKDKWTVVKDGKEH----LELLIVDAKGHDIQVLIPTAYKSVYDKT 75
Query: 83 LVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQT---KVRIISMWNTRARYLP 134
L S Y +T F+V+ N F+ ++H +K+++ T V + + NT +Y P
Sbjct: 76 LEVNSTYTLTNFHVVKNDVLFKVSDHKYKLIWTGGTTAVDVNLNDISNTHIKYKP 130
>Medtr6g477950.1 | B3 DNA-binding domain protein | LC |
chr6:28716058-28720043 | 20130731
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 24 IDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLKKFRGEL 83
++ KKD W++ V+V W + G+ + +V++D +G I+ II G + L
Sbjct: 190 VNDKKDLWKLAVKVKNKWTVVKDGKEH----LELVIVDDKGNDIQVIIPTGYKAVYDKIL 245
Query: 84 VEGSVYRITYFNVISNSG-AFRATEHGFKIVFNSQT 118
E + Y ++ FNV++N+ AF+ ++H +K+ S T
Sbjct: 246 EENTTYTLSNFNVLNNNDLAFKTSDHKYKLKCTSGT 281
>Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944777
| 20130731
Length = 163
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 147 KEGSKIQASVCKD--HRLRGEIFTGFVYKISKFKVIPNTRELRCTSHGYRLVFNTHTILT 204
K+G +I AS+ + ++ + ++ G V+ IS F V N R + + Y+L F +T +
Sbjct: 40 KQGDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVK 99
Query: 205 LSGDTSIPREGWSFYDTGYIERCRGIFSHLSDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
LS +P +SF + ++L D IGV+ V + +G TKM ++EL
Sbjct: 100 LSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL 159
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 63 EGVKIEGIIKKGMLKKFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQTKVRI 122
+G +I I++ ++ KF+ +L EG V+ I+ FNV SN G++R + + +K+ F TKV++
Sbjct: 41 QGDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKL 100
>Medtr7g025160.1 | animal RPA1 domain protein, putative | LC |
chr7:8337521-8336445 | 20130731
Length = 253
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 18 RSICIGIDPKKDTWRVKVRVLRVWDMFPVGEPSKPYAIHVVLIDVEGVKIEGIIKKGMLK 77
+ + KKD W++ VRV W G+ + ++++D +G I+ +I
Sbjct: 15 KEFIAAVTDKKDLWKLSVRVKDKWTAVKDGKEH----LELLIVDAKGHDIQLLIPTAYKS 70
Query: 78 KFRGELVEGSVYRITYFNVISNSGAFRATEHGFKIVFNSQT---KVRIISMWNTRARYLP 134
+ L S Y +T F V+ N F+ ++H +K+++ T V + + NT +Y P
Sbjct: 71 VYDKTLEVNSTYTLTNFQVLKNDVLFKVSDHKYKLIWTGGTTAVDVNLNDIPNTHIKYKP 130
>Medtr4g022520.1 | DUF223 domain protein | HC | chr4:7510297-7517059
| 20130731
Length = 206
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 149 GSKIQASVCKD--HRLRGEIFTGFVYKISKFKVIPNTRELRCTSHGYRLVFNTHTILTLS 206
G +I AS + ++ + ++ G V+ IS F V N+ R + + Y+L F +T + LS
Sbjct: 11 GDRIGASTRRTLIYKSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLS 70
Query: 207 GDTSIPREGWSFYDTGYIERCRGIFSHLSDFIGVVSSVSAVWRFVTEGKTTKMMIVEL 264
+P +SF + + L D IGV++ V + ++G TKM ++EL
Sbjct: 71 KTVLVPTNVYSFTPASDVFNESYDNNFLVDVIGVMTGVGVEREYESDGVKTKMNVIEL 128