Miyakogusa Predicted Gene

Lj5g3v2146940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2146940.1 Non Characterized Hit- tr|D8UHH7|D8UHH7_VOLCA
Putative uncharacterized protein OS=Volvox carteri GN=,40.87,3e-18,
,CUFF.56829.1
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g022320.1 | peptidyl serine alpha-galactosyltransferase | ...   240   3e-64
Medtr0044s0180.1 | peptidyl serine alpha-galactosyltransferase |...   236   4e-63

>Medtr6g022320.1 | peptidyl serine alpha-galactosyltransferase | HC
           | chr6:7788998-7780243 | 20130731
          Length = 972

 Score =  240 bits (613), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 109/127 (85%), Positives = 122/127 (96%)

Query: 20  TVSAKKAPWKMHTLFSVECQNYFDWQTVGLMHSYRKAKQPGPITRLLSCTDEQKKSYRGM 79
           T  AKK  WK+HTLFSVECQNYFDWQTVGLM+SYRKAKQPGPITRLLSCTDE+KK+Y+GM
Sbjct: 7   TKGAKKVSWKVHTLFSVECQNYFDWQTVGLMNSYRKAKQPGPITRLLSCTDEEKKNYKGM 66

Query: 80  HLAPTFEVPSMSKHPTTGDWYPAINKPAGVLYWLKHSKDAENVDFVVILDADMIIRGPII 139
           HLAPTF+VPSMS+HP TGDWYPAINKPAGV++WLKHSKDA+NVD+V+ILDADMIIRGPI+
Sbjct: 67  HLAPTFQVPSMSRHPKTGDWYPAINKPAGVVHWLKHSKDAKNVDWVLILDADMIIRGPIL 126

Query: 140 PWELGAE 146
           PWELGAE
Sbjct: 127 PWELGAE 133



 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 80/118 (67%), Positives = 92/118 (77%), Gaps = 4/118 (3%)

Query: 29  KMHTLFSVECQNYFDWQTVGLMHSYRKAKQPGPITRLLSCTDEQKKSYRGMHLAPTFEVP 88
           K+HT+FS EC  YFDWQTVGLMHS+  + QPG ITRLLSC DE  + Y+G  LAPT  VP
Sbjct: 381 KIHTVFSTECTPYFDWQTVGLMHSFHLSGQPGNITRLLSCNDEDLRKYKGQDLAPTHYVP 440

Query: 89  SMSKHPTTGDWYPAINKPAGVLYWLKH-SKDAENVDFVVILDADMIIRGPIIPWELGA 145
           SMS+HP TGDWYPAINKPA VL+WL H + DAE   ++VILDADMI+RGPI PWE  A
Sbjct: 441 SMSRHPLTGDWYPAINKPAAVLHWLNHVNVDAE---YIVILDADMIMRGPITPWEFKA 495


>Medtr0044s0180.1 | peptidyl serine alpha-galactosyltransferase | HC
           | scaffold0044:58032-50900 | 20130731
          Length = 798

 Score =  236 bits (603), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 114/147 (77%), Positives = 131/147 (89%), Gaps = 2/147 (1%)

Query: 1   MAKFLILWSVVMVVGVAICTV-SAKKAPWKMHTLFSVECQNYFDWQTVGLMHSYRKAKQP 59
           M K +IL  + +++G A+ TV SA KAPW++HTLFSVEC NYFDWQTVGLMHS+RK KQP
Sbjct: 1   MRKVMILM-LFVILGHAVFTVESAYKAPWRIHTLFSVECGNYFDWQTVGLMHSFRKVKQP 59

Query: 60  GPITRLLSCTDEQKKSYRGMHLAPTFEVPSMSKHPTTGDWYPAINKPAGVLYWLKHSKDA 119
           G ITRLLSCTDEQKKSYRGMHLAPTFEVPSMS HP TGD YPAINKPAG+++WLKHS+DA
Sbjct: 60  GHITRLLSCTDEQKKSYRGMHLAPTFEVPSMSIHPVTGDRYPAINKPAGIVHWLKHSEDA 119

Query: 120 ENVDFVVILDADMIIRGPIIPWELGAE 146
           ENVD+V+ILDADMIIRGPI PW++GAE
Sbjct: 120 ENVDWVLILDADMIIRGPIRPWQIGAE 146



 Score =  172 bits (437), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 82/118 (69%), Positives = 95/118 (80%), Gaps = 4/118 (3%)

Query: 29  KMHTLFSVECQNYFDWQTVGLMHSYRKAKQPGPITRLLSCTDEQKKSYRGMHLAPTFEVP 88
           K+HT+FS EC +YFDWQTVGLMHS+  + QPG ITRLLSC+DE  K Y+G +LAPT  VP
Sbjct: 393 KIHTVFSTECSSYFDWQTVGLMHSFHLSGQPGNITRLLSCSDEDLKLYKGRNLAPTHYVP 452

Query: 89  SMSKHPTTGDWYPAINKPAGVLYWLKHSK-DAENVDFVVILDADMIIRGPIIPWELGA 145
           SMS+HP TGDWYPAINKPA VL+WL H+  DAE   F+VILDADMI+RGPI PWE  A
Sbjct: 453 SMSQHPLTGDWYPAINKPAAVLHWLNHANIDAE---FIVILDADMIMRGPITPWEFKA 507