Miyakogusa Predicted Gene
- Lj5g3v2133680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2133680.1 tr|G4ZXA8|G4ZXA8_PHYSP Adenylate kinase
OS=Phytophthora sojae (strain P6497) GN=adk PE=3
SV=1,40.83,5e-18,DUF1995,Domain of unknown function DUF1995;
ADK,Adenylate kinase; Adenylate_kinase_Adk,Adenylate kin,CUFF.56742.1
(602 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g461290.1 | adenylate kinase | HC | chr2:25307375-25315642... 998 0.0
Medtr4g035170.1 | adenylate kinase | HC | chr4:12046801-12052564... 270 3e-72
Medtr4g103800.1 | adenylate kinase | HC | chr4:42939312-42944040... 145 9e-35
Medtr4g103800.2 | adenylate kinase | HC | chr4:42939312-42944040... 120 3e-27
Medtr4g103800.3 | adenylate kinase | HC | chr4:42939312-42944040... 120 3e-27
Medtr7g100530.1 | P-loop nucleoside triphosphate hydrolase super... 118 2e-26
Medtr1g067050.1 | adenylate kinase | HC | chr1:28853082-28857350... 114 3e-25
Medtr8g009520.1 | UMP-CMP kinase family protein | HC | chr8:2227... 100 7e-21
Medtr4g035850.1 | uridylate kinase-like protein | HC | chr4:1266... 91 2e-18
Medtr4g035850.2 | uridylate kinase-like protein | HC | chr4:1266... 91 5e-18
Medtr5g068940.1 | uridylate kinase-like protein | HC | chr5:2918... 87 3e-17
>Medtr2g461290.1 | adenylate kinase | HC | chr2:25307375-25315642 |
20130731
Length = 593
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/565 (84%), Positives = 523/565 (92%), Gaps = 1/565 (0%)
Query: 37 PCQLLCHLSFHPQPLRLSNLRGHAYLPPKTKAL-KVIKCSTTKPLKVMISGAPASGKGTQ 95
PC LL H +F+ Q L L+N HA LP + KA KVI CST++PLKVMISGAPASGKGTQ
Sbjct: 29 PCLLLQHHNFNTQYLHLTNFSRHANLPLRPKATRKVINCSTSEPLKVMISGAPASGKGTQ 88
Query: 96 CELIVSKFGLVHISTGDLLRAEVAAGTEIGSKAKEFMNAGRLVPDEIVTAMVAARLARED 155
CELIV+K+GLVHISTGDLLRAEVAAGTEIG+KAKEFMNAGRLVPDEIVTAMVAARL+ ED
Sbjct: 89 CELIVNKYGLVHISTGDLLRAEVAAGTEIGNKAKEFMNAGRLVPDEIVTAMVAARLSCED 148
Query: 156 AKQKGWLLDGYPRSLSQAESLEKMQIRPDLFIVLDVPDEILIDRCVGRRLDPVTGKIYHL 215
KQKGWLLDGYPRS SQAESLEKMQIRPD++IVLDV DEILI+RCVGRRLDPVTGKIYH
Sbjct: 149 VKQKGWLLDGYPRSFSQAESLEKMQIRPDVYIVLDVHDEILIERCVGRRLDPVTGKIYHE 208
Query: 216 SFFPPETEEIKARLITRPDDTEEKVKSRLNIYKQNAEAVASSYSNITNKIDGSHPKEVVF 275
FFPPETEEIKARL+TRPDDTEEKV SRLNIYKQNAE+V+SSYSNITNKIDGS PKE VF
Sbjct: 209 KFFPPETEEIKARLVTRPDDTEEKVMSRLNIYKQNAESVSSSYSNITNKIDGSRPKEEVF 268
Query: 276 KEVESLLSQLQQDKVKIMKSGEKSILDTRMRLETLSQDKWKGIPTKLNNIPHSREIREYF 335
K++ESLLSQLQQD VKI+KSGEK I + +L QDKW+GIPT+LNNIPHSRE+R+YF
Sbjct: 269 KDIESLLSQLQQDSVKIVKSGEKPIPGMKKGQASLIQDKWRGIPTRLNNIPHSREMRKYF 328
Query: 336 YDDVLLATQRAINDGKTRLKVDINIPELNPEMDVYRIGTLMELVRSLALSFADDGKRVKV 395
YDDVLLATQRAINDGKTRLKVDINIPELNPEMDVYRIGTL+EL+RSLALSFADDGKRVKV
Sbjct: 329 YDDVLLATQRAINDGKTRLKVDINIPELNPEMDVYRIGTLLELIRSLALSFADDGKRVKV 388
Query: 396 CVQGSMGQGALAGMPLQLAGTRKILEFMDWGDYGAKGTFINIGSIGAAEVEEQDDLYILI 455
CVQGSMG+GALAGMPLQLAG+RKILEFMDWGDYGAKGTFINIGSIGAAEVEEQDD+Y L+
Sbjct: 389 CVQGSMGEGALAGMPLQLAGSRKILEFMDWGDYGAKGTFINIGSIGAAEVEEQDDIYFLV 448
Query: 456 APQNAVGNCIIDDLRAMTNAAEHRPVIMINAKLQDLPASSGIMQTMGRDQRLKYAASFES 515
APQNAVGNCIIDDL+AMT AAEHRPVI+INAKL+DLPASSGIMQTMGRD+RL+Y+ASFES
Sbjct: 449 APQNAVGNCIIDDLKAMTTAAEHRPVILINAKLKDLPASSGIMQTMGRDKRLEYSASFES 508
Query: 516 CYFFRLLYYAGTQYPIMGALRMSHPYRYELYKRVDESPGKEKYILLSTFPQRPTTDEIND 575
CY FRLLYYAGTQYPIMGALRMS+PYRYELYKRV+ESPGKEKY LLSTFP+RPT DEIND
Sbjct: 509 CYLFRLLYYAGTQYPIMGALRMSYPYRYELYKRVEESPGKEKYALLSTFPERPTIDEIND 568
Query: 576 AFQGKPRSETRSASGFWGLLSGMFY 600
+F+GKPR+ T+ ASGFWG LSGMF+
Sbjct: 569 SFEGKPRNGTKKASGFWGSLSGMFF 593
>Medtr4g035170.1 | adenylate kinase | HC | chr4:12046801-12052564 |
20130731
Length = 306
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 169/221 (76%)
Query: 69 LKVIKCSTTKPLKVMISGAPASGKGTQCELIVSKFGLVHISTGDLLRAEVAAGTEIGSKA 128
+K + + +PL VMISGAPASGKGTQC LI +K+GLVH++ GDLLRAE+ G+E G +A
Sbjct: 77 VKAVAKTVEEPLHVMISGAPASGKGTQCHLITNKYGLVHVAAGDLLRAEIETGSENGKRA 136
Query: 129 KEFMNAGRLVPDEIVTAMVAARLAREDAKQKGWLLDGYPRSLSQAESLEKMQIRPDLFIV 188
KE+M G+LVPDEIV MV RL + D+ + GWLLDGYPRSLSQA +L+++ +PD+FI+
Sbjct: 137 KEYMEKGQLVPDEIVVMMVKDRLLKPDSVENGWLLDGYPRSLSQATALKELGFKPDIFIL 196
Query: 189 LDVPDEILIDRCVGRRLDPVTGKIYHLSFFPPETEEIKARLITRPDDTEEKVKSRLNIYK 248
L+V ++IL++R VGRRLDPVTGKIYHL + PPET+EI RL R DDTEEKVK RLN +
Sbjct: 197 LEVSEDILVERVVGRRLDPVTGKIYHLKYSPPETKEIADRLTQRFDDTEEKVKLRLNTHH 256
Query: 249 QNAEAVASSYSNITNKIDGSHPKEVVFKEVESLLSQLQQDK 289
QN EAV S Y +IT KI+G+ ++ VF +++ L+ L + +
Sbjct: 257 QNVEAVLSMYKDITIKINGNSSQKEVFAQIDGALTTLLEQR 297
>Medtr4g103800.1 | adenylate kinase | HC | chr4:42939312-42944040 |
20130731
Length = 243
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 133/241 (55%), Gaps = 11/241 (4%)
Query: 54 SNLRGHAYLPPKTKALKVIKCSTTKPLKVMISGAPASGKGTQCELIVSKFGLVHISTGDL 113
SNL + ++ L+ KCS+ ++++ G P SGKGTQ +I ++ L H++TGD+
Sbjct: 4 SNLEDVPSVDLMSELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDM 63
Query: 114 LRAEVAAGTEIGSKAKEFMNAGRLVPDEIVTAMVAARLAREDAKQKGWLLDGYPRSLSQA 173
LRA VAA T +G KAKE M G LV D++V ++ + + QKG++LDG+PR++ QA
Sbjct: 64 LRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSC-QKGFILDGFPRTVVQA 122
Query: 174 ESLEKM----QIRPDLFIVLDVPDEILIDRCVGRRLDPVTGKIYHLSFFPPETEEIK--- 226
+ L++M + D + + D IL +R GR + P +G+ YH F PP+ +
Sbjct: 123 QKLDEMLQKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGVDDVT 182
Query: 227 -ARLITRPDDTEEKVKSRLNIYKQNAEAVASSYSN--ITNKIDGSHPKEVVFKEVESLLS 283
LI R DDT +KSRL + + E V YS I + P + V EVE +LS
Sbjct: 183 GEPLIQRKDDTAAVLKSRLESFHRQTEPVIDYYSKKGIVASLHAEKPPKEVTSEVEKVLS 242
Query: 284 Q 284
Q
Sbjct: 243 Q 243
>Medtr4g103800.2 | adenylate kinase | HC | chr4:42939312-42944040 |
20130731
Length = 192
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 54 SNLRGHAYLPPKTKALKVIKCSTTKPLKVMISGAPASGKGTQCELIVSKFGLVHISTGDL 113
SNL + ++ L+ KCS+ ++++ G P SGKGTQ +I ++ L H++TGD+
Sbjct: 4 SNLEDVPSVDLMSELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDM 63
Query: 114 LRAEVAAGTEIGSKAKEFMNAGRLVPDEIVTAMVAARLAREDAKQKGWLLDGYPRSLSQA 173
LRA VAA T +G KAKE M G LV D++V ++ + + QKG++LDG+PR++ QA
Sbjct: 64 LRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSC-QKGFILDGFPRTVVQA 122
Query: 174 ESLEKM----QIRPDLFIVLDVPDEILIDRCVGRRLDPVTGKIYHLSFFPPETEEI 225
+ L++M + D + + D IL +R GR + P +G+ YH F PP+ +
Sbjct: 123 QKLDEMLQKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGV 178
>Medtr4g103800.3 | adenylate kinase | HC | chr4:42939312-42944040 |
20130731
Length = 192
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 54 SNLRGHAYLPPKTKALKVIKCSTTKPLKVMISGAPASGKGTQCELIVSKFGLVHISTGDL 113
SNL + ++ L+ KCS+ ++++ G P SGKGTQ +I ++ L H++TGD+
Sbjct: 4 SNLEDVPSVDLMSELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDM 63
Query: 114 LRAEVAAGTEIGSKAKEFMNAGRLVPDEIVTAMVAARLAREDAKQKGWLLDGYPRSLSQA 173
LRA VAA T +G KAKE M G LV D++V ++ + + QKG++LDG+PR++ QA
Sbjct: 64 LRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSC-QKGFILDGFPRTVVQA 122
Query: 174 ESLEKM----QIRPDLFIVLDVPDEILIDRCVGRRLDPVTGKIYHLSFFPPETEEI 225
+ L++M + D + + D IL +R GR + P +G+ YH F PP+ +
Sbjct: 123 QKLDEMLQKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGV 178
>Medtr7g100530.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr7:40481478-40478498 |
20130731
Length = 268
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 21/191 (10%)
Query: 86 GAPASGKGTQCELIVSKFGLVHISTGDLLRAEVAAGTEIGSKAKEFMNAGRLVPDEIVTA 145
G P GKGT + + G+ HI+TGDL+R E+++ + S+ E +N G+LV DEI+ +
Sbjct: 43 GCPGVGKGTYASRLCNLLGVPHIATGDLVRHELSSNGPLSSQLSEIVNQGQLVSDEIIMS 102
Query: 146 MVAARLAREDAK-QKGWLLDGYPRSLSQAESLEKMQIRPDLFIVLDVPDEILIDRCVGRR 204
+++ RLA AK + G++LDG+PR++ QAE LE + DL + L + +E L+ +C+GRR
Sbjct: 103 LLSKRLAEGQAKGESGFILDGFPRTIKQAEILEGV-TDIDLVVNLKIREEALLAKCLGRR 161
Query: 205 LDPVTGKIYHLS-----------------FFPPETEEIKARLITRPDDTEEKVKSRLNIY 247
G ++++ PP E ++LITR DDTE VK RL IY
Sbjct: 162 TCSQCGGNFNVASINIKGENGCPGISMDPLLPP--EHCMSKLITRSDDTEPVVKERLRIY 219
Query: 248 KQNAEAVASSY 258
+ ++ V Y
Sbjct: 220 NELSQPVEGFY 230
>Medtr1g067050.1 | adenylate kinase | HC | chr1:28853082-28857350 |
20130731
Length = 286
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 108/191 (56%), Gaps = 21/191 (10%)
Query: 86 GAPASGKGTQCELIVSKFGLVHISTGDLLRAEVAAGTEIGSKAKEFMNAGRLVPDEIVTA 145
G P GKGT + + G+ HI+TGDL+R E+++ + S+ E + G+LV DEI+
Sbjct: 60 GCPGVGKGTYASRLSNLLGVPHIATGDLVREELSSSGPLSSQLSEIVKQGQLVSDEIIIN 119
Query: 146 MVAARLAREDAK-QKGWLLDGYPRSLSQAESLEKMQIRPDLFIVLDVPDEILIDRCVGRR 204
+++ RL +AK + G++LDG+PR++ QAE LE + DL I L +P+ +L+++C+GRR
Sbjct: 120 LLSKRLDDGEAKGELGFILDGFPRTIKQAEILEGVA-DIDLVINLRLPENVLLEKCLGRR 178
Query: 205 LDPVTGKIYHLS-----------------FFPPETEEIKARLITRPDDTEEKVKSRLNIY 247
+ G ++++ PP + ++LITR DDTE VK RL IY
Sbjct: 179 ICNQCGGNFNVASIDIKAENGIPGIVMAPLLPP--TDCMSKLITRSDDTEAVVKERLRIY 236
Query: 248 KQNAEAVASSY 258
+ + V Y
Sbjct: 237 NETSRPVEEFY 247
>Medtr8g009520.1 | UMP-CMP kinase family protein | HC |
chr8:2227119-2223648 | 20130731
Length = 208
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 30/207 (14%)
Query: 79 PLKVMISGAPASGKGTQCELIVSKFGLVHISTGDLLRAEVAAGTEIGSKAKEFMNAGRLV 138
P V + G P SGKGTQC +V FG H+S GDLLRAE+ +G+E G+ + + G++V
Sbjct: 21 PTVVFVLGGPGSGKGTQCANVVEHFGFTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIV 80
Query: 139 PDEIVTAMVAARLAREDAKQKGWLLDGYPRSLSQAESLEKMQ-IRPDLFIVLDVPDEILI 197
P E+ ++ + A +D +L+DG+PR+ + E++ I P + D P+E +
Sbjct: 81 PSEVTIRLL--QQAIKDNGNDKFLIDGFPRNEENRAAFERVTGIEPAFVLYFDCPEEEME 138
Query: 198 DRCVGRRLDPVTGKIYHLSFFPPETEEIKARLITRPDDTEEKVKSRLNIYKQNAEAVASS 257
R + R R DD E ++ R ++ ++ V +
Sbjct: 139 RRLLSRNQ-------------------------GREDDNIETIRKRFKVFLDSSLPVINY 173
Query: 258 YS--NITNKIDGSHPKEVVFKEVESLL 282
Y K+D + P E VF+ V+++
Sbjct: 174 YDAKGKVRKVDAARPVEEVFESVKAIF 200
>Medtr4g035850.1 | uridylate kinase-like protein | HC |
chr4:12665969-12671433 | 20130731
Length = 241
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 36/253 (14%)
Query: 44 LSFH--PQPLRLSN-LRGHAYL---PPKTKALKVIKCSTTKPLKVMISGAPASGKGTQCE 97
LSFH + +L+N H ++ P + V+ + + G P SGKGTQC
Sbjct: 13 LSFHITQEGSKLNNAFHCHRFISGSPLHFQEKDVVSPKHMDSVITFVLGGPGSGKGTQCA 72
Query: 98 LIVSKFGLVHISTGDLLRAEVAAGTEIGSKAKEFMNAGRLVPDEIVTAMVAARLAREDAK 157
IV FG H+S GDLLR E+ + +E G+ E + GR+VP + ++ + D +
Sbjct: 73 RIVETFGFKHLSAGDLLRKEMVSDSEYGAMILETIREGRIVPSAVTVRLILREMQYGDNR 132
Query: 158 QKGWLLDGYPRSLSQAESLEKMQ-IRPDLFIVLDVPDEILIDRCVGRRLDPVTGKIYHLS 216
+ +L+DG+PRS + E + PD + D P+E ++ R + R G+I
Sbjct: 133 K--FLIDGFPRSEENRIAFEHITGTEPDFVLFFDCPEEEMVKRVLSRN----QGRI---- 182
Query: 217 FFPPETEEIKARLITRPDDTEEKVKSRLNIYKQNAEAVASSYS--NITNKIDGSHPKEVV 274
DD + +K RL +++ V Y+ ++I+ ++ +
Sbjct: 183 -----------------DDNIDTIKKRLKVFEALNLPVIDHYARRGRLHRINAVGTEDEI 225
Query: 275 FKEVESLLSQLQQ 287
F++V + + +Q
Sbjct: 226 FEQVRPVFAACEQ 238
>Medtr4g035850.2 | uridylate kinase-like protein | HC |
chr4:12665969-12671433 | 20130731
Length = 218
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 83 MISGAPASGKGTQCELIVSKFGLVHISTGDLLRAEVAAGTEIGSKAKEFMNAGRLVPDEI 142
+ G P SGKGTQC IV FG H+S GDLLR E+ + +E G+ E + GR+VP +
Sbjct: 35 FVLGGPGSGKGTQCARIVETFGFKHLSAGDLLRKEMVSDSEYGAMILETIREGRIVPSAV 94
Query: 143 VTAMVAARLAREDAKQKGWLLDGYPRSLSQAESLEKMQ-IRPDLFIVLDVPDEILIDRCV 201
++ + D ++ +L+DG+PRS + E + PD + D P+E ++ R +
Sbjct: 95 TVRLILREMQYGDNRK--FLIDGFPRSEENRIAFEHITGTEPDFVLFFDCPEEEMVKRVL 152
Query: 202 GRRLDPVTGKIYHLSFFPPETEEIKARLITRPDDTEEKVKSRLNIYKQNAEAVASSYS-- 259
R G+I DD + +K RL +++ V Y+
Sbjct: 153 SRN----QGRI---------------------DDNIDTIKKRLKVFEALNLPVIDHYARR 187
Query: 260 NITNKIDGSHPKEVVFKEVESLLSQLQQ 287
++I+ ++ +F++V + + +Q
Sbjct: 188 GRLHRINAVGTEDEIFEQVRPVFAACEQ 215
>Medtr5g068940.1 | uridylate kinase-like protein | HC |
chr5:29183060-29178755 | 20130731
Length = 218
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 83 MISGAPASGKGTQCELIVSKFGLVHISTGDLLRAEVAAGTEIGSKAKEFMNAGRLVPDEI 142
+ G P SGKGTQC IV FG H+S GDLLR + + +E G+ E + GR+VP +
Sbjct: 35 FVLGGPGSGKGTQCARIVETFGFKHLSAGDLLRKAMVSDSEYGAMILETIREGRIVPSAV 94
Query: 143 VTAMVAARLAREDAKQKGWLLDGYPRSLSQAESLEKMQ-IRPDLFIVLDVPDEILIDRCV 201
++ + D ++ +L+DG+PRS + E + PD + D P+E ++ R +
Sbjct: 95 TVRLILREMQYGDNRK--FLIDGFPRSEENRIAFEHITGTEPDFVLYFDCPEEEMVKRVL 152
Query: 202 GRRLDPVTGKIYHLSFFPPETEEIKARLITRPDDTEEKVKSRLNIYKQNAEAVASSYS-- 259
R G+I DD + +K RL +++ V Y+
Sbjct: 153 SRN----QGRI---------------------DDNIDTIKKRLKVFEALNLPVIDHYARR 187
Query: 260 NITNKIDGSHPKEVVFKEVESLLSQLQQ 287
++I+ ++ +F++V + + +Q
Sbjct: 188 GRLHRINAVGTEDEIFEQVRPVFAACEQ 215