Miyakogusa Predicted Gene

Lj5g3v2113500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2113500.1 Non Characterized Hit- tr|A2ZJE6|A2ZJE6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,44.06,2e-19,seg,NULL,CUFF.56726.1
         (156 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g107495.1 | hypothetical protein | HC | chr1:48803181-4880...   137   3e-33

>Medtr1g107495.1 | hypothetical protein | HC |
           chr1:48803181-48800247 | 20130731
          Length = 163

 Score =  137 bits (346), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/127 (54%), Positives = 88/127 (69%), Gaps = 3/127 (2%)

Query: 1   MGKTSTRSDS---KSDRKLEKKLEFYSKVKDTVASLGAXXXXXXXXXXXXXXXXXXXAYN 57
           MGKT+TRSDS   KSDRK +KKL+FY+KVK  VASL A                   AYN
Sbjct: 1   MGKTNTRSDSTDSKSDRKFDKKLQFYTKVKTAVASLTATKSISKNQRKHQRRQKKLKAYN 60

Query: 58  LSSILESLPELKASQKSDREDDFKLNCKSRKKLLLKEGQRLSAVLKDNLFQADPLAILHQ 117
           LSS+L++LPE  A QK   ED+FK+NCK+R+KL+LKEGQRL  + K++ FQ +PLA +HQ
Sbjct: 61  LSSLLDTLPEFNAPQKPCNEDNFKVNCKTRQKLVLKEGQRLCELFKNDSFQVNPLAAIHQ 120

Query: 118 HLQNTQP 124
           HL++T P
Sbjct: 121 HLRSTHP 127