Miyakogusa Predicted Gene

Lj5g3v2113480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2113480.1 Non Characterized Hit- tr|I1LEK2|I1LEK2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.28,0,NA+/H+
ANTITRANSPORTER,NULL; SOLUTE CARRIER FAMILY 13 MEMBER,NULL; seg,NULL;
CitMHS,Citrate transpor,CUFF.56733.1
         (582 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g107485.1 | Na+/H+ antiporter | HC | chr1:48794751-4878896...   813   0.0  

>Medtr1g107485.1 | Na+/H+ antiporter | HC | chr1:48794751-48788966 |
           20130731
          Length = 579

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/584 (74%), Positives = 462/584 (79%), Gaps = 10/584 (1%)

Query: 3   SSLSIGTHLSNFQHLRNPRIPLHGLC---PVDYSPSSQSQPLFAGIRFRASSPRLLRTVV 59
           ++ SIGTHLS FQH RN R+  H +    P   S  + S       RF   +P+LLR+ V
Sbjct: 2   ATFSIGTHLSMFQHSRNSRLSSHTIQFSPPQSQSFFTSSSSPSCRTRFGVPNPKLLRSNV 61

Query: 60  LARAEDKARAPTPXXXXXXXXXXXXXXDMTPESGNCDPLCSVDETSSEDFEGNYQPKTDL 119
           L RA+DK R                  D+T ESG CDPLCSVDETSS+DFE NYQPKTDL
Sbjct: 62  LVRAKDKPRDSN------SQTSQQQFQDLTSESGTCDPLCSVDETSSQDFEDNYQPKTDL 115

Query: 120 LKXXXXXXXXXXXXXXXNHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAV 179
           LK               NHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAV
Sbjct: 116 LKAVAVFAAAATGTVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAV 175

Query: 180 SLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIKTR 239
           SLWVIRSIGAPST+IAVSEL+HASAEVSEIVFFLLGAMTIVEIVDAHQGFK+VTDNIKTR
Sbjct: 176 SLWVIRSIGAPSTEIAVSELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKIVTDNIKTR 235

Query: 240 NPRLLLWVVGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKILXXXXXXXXXXXXXW 299
           NPRLLLWVVGF+TFFLSS+LDNLTSTIVMVSLLRKLVPPSEYRKIL             W
Sbjct: 236 NPRLLLWVVGFITFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAW 295

Query: 300 TPIGDVTTTMLWIHGQISTLPTMKDLFIPSAISLAVPLALMSLTSEVSGKGSDSPNVLAS 359
           TPIGDVTTTMLWIHGQI+T+ TMK LF+PSAISLAVPLALMSLTSE +GKG DS +VLAS
Sbjct: 296 TPIGDVTTTMLWIHGQITTVETMKGLFLPSAISLAVPLALMSLTSEANGKGQDSSDVLAS 355

Query: 360 EQMAPRGQLVFSVGLGALIFVPVFKAXXXXXXXXXXXXXXXXXXXXXDAIHYGESE-RQK 418
           EQMAPRG+LVFSVGLGALIFVPVFKA                     DAIHYGESE R+K
Sbjct: 356 EQMAPRGKLVFSVGLGALIFVPVFKAVTGLPPYMGMLLGLGVLWILTDAIHYGESEKRKK 415

Query: 419 LKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDSHVPNSELXXXXXXXXXX 478
           LKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLD+HV NSEL          
Sbjct: 416 LKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDAHVQNSELIASAIGVISA 475

Query: 479 XXDNVPLVAAAMGMYDVTAFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFF 538
             DNVPLVAA MGMYDVT+FPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFF
Sbjct: 476 IIDNVPLVAATMGMYDVTSFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFF 535

Query: 539 WYFRKISGFAFAGYATGIAAYLAFHNLNVSLPTTLAEVPFLSGS 582
           WYF+K+SGFAFAGYA GIAAYLA HNLN+SLPTTLAEVPFLSGS
Sbjct: 536 WYFKKVSGFAFAGYAAGIAAYLAVHNLNISLPTTLAEVPFLSGS 579